Carg06328 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCCCCTTCGGCTTCCCATTTCCTCTCTGTCTTCTTTCTCAGAGCTTCAGCCCTAAAACTCTAAGCTCCCGGATTTCTGCTCTCGTTTCCGGCGAATTTTCATCAGCTTTCCGTTTCTTTTCCTTCGTTCACTATGAGAACTGCGCCGCTATTCTACGCCGGCTGCGCTGATTACCTTATCCCCGAGCCTCATTTCCTTGATTCATGTTCTCTTTGCCGGAAACCGCTCGGACGCAACTCCGATATCTTCATGTACAGGTCTGTTCAATTTCCATGACCTCAAAGAGTTTGTGGTTATCTTGAGTTTCAATTGAGAGTTTTCTGTTTAGTTGTTGATAATTTGAGGCTTGATAAGCGTCGAATTATGCTAGATCGAATTTGTGTGGTGCTTTTTAGGTTTAGGTTTGTTTGAGTGATGAAAAGTGATTTTGGAGTTGAATTATGTTTAGATCGGACTGATTTGTGGTCGTTTTGTTCTGATTTTGATGTTTTGATCTGAGAATTGAAAGTTTTGTTACTGTATTGCAGAGGAAACACTCCGTTTTGTAGCAAAGAGTGCCGGCAAGAACAGATTGATGTCGATGAGGCAAAGGAGAAAAACTGGAGACGTTCTTCTTCTTCTACTACTTCTTCTTCTAGCACTCAAAGCCACAGAAAACAAGAATCTAGCAAGAAAACCGTTCGATCCGGCACCGTTGCGGTGGCCTGAGATCTTCTATCCGAATCAGAACAAATTTTCTTCTACAGAGAAACAACTTTCCCAATTTGGAAAACGAAAATTGTGAGGTTGAGTGAAGGCTGAGAATGAATTCTCATCACCAGCTTCAGGACCCGATTTTCAGAGAACCAAAAGAAAAAAAAAAAATCCATAAATAACTTTTTGATCTCTGAATGTGTATTAAAAAAAAAACCATGGGAAAGCAGTCCTGAGATTGGGTGGTTCTTTGCAGTTTCTCTT CTTCCCCTTCGGCTTCCCATTTCCTCTCTGTCTTCTTTCTCAGAGCTTCAGCCCTAAAACTCTAAGCTCCCGGATTTCTGCTCTCGTTTCCGGCGAATTTTCATCAGCTTTCCGTTTCTTTTCCTTCGTTCACTATGAGAACTGCGCCGCTATTCTACGCCGGCTGCGCTGATTACCTTATCCCCGAGCCTCATTTCCTTGATTCATGTTCTCTTTGCCGGAAACCGCTCGGACGCAACTCCGATATCTTCATGTACAGAGGAAACACTCCGTTTTGTAGCAAAGAGTGCCGGCAAGAACAGATTGATGTCGATGAGGCAAAGGAGAAAAACTGGAGACGTTCTTCTTCTTCTACTACTTCTTCTTCTAGCACTCAAAGCCACAGAAAACAAGAATCTAGCAAGAAAACCGTTCGATCCGGCACCGTTGCGGTGGCCTGAGATCTTCTATCCGAATCAGAACAAATTTTCTTCTACAGAGAAACAACTTTCCCAATTTGGAAAACGAAAATTGTGAGGTTGAGTGAAGGCTGAGAATGAATTCTCATCACCAGCTTCAGGACCCGATTTTCAGAGAACCAAAAGAAAAAAAAAAAATCCATAAATAACTTTTTGATCTCTGAATGTGTATTAAAAAAAAAACCATGGGAAAGCAGTCCTGAGATTGGGTGGTTCTTTGCAGTTTCTCTT ATGAGAACTGCGCCGCTATTCTACGCCGGCTGCGCTGATTACCTTATCCCCGAGCCTCATTTCCTTGATTCATGTTCTCTTTGCCGGAAACCGCTCGGACGCAACTCCGATATCTTCATGTACAGAGGAAACACTCCGTTTTGTAGCAAAGAGTGCCGGCAAGAACAGATTGATGTCGATGAGGCAAAGGAGAAAAACTGGAGACGTTCTTCTTCTTCTACTACTTCTTCTTCTAGCACTCAAAGCCACAGAAAACAAGAATCTAGCAAGAAAACCGTTCGATCCGGCACCGTTGCGGTGGCCTGA MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAVA
BLAST of Carg06328 vs. NCBI nr
Match: XP_022950439.1 (uncharacterized protein LOC111453538 [Cucurbita moschata] >XP_023538836.1 uncharacterized protein LOC111799645 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 161.0 bits (406), Expect = 2.1e-36 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Carg06328 vs. NCBI nr
Match: XP_022974769.1 (uncharacterized protein LOC111473492 [Cucurbita maxima] >XP_022975241.1 uncharacterized protein LOC111474355 [Cucurbita maxima]) HSP 1 Score: 151.8 bits (382), Expect = 1.3e-33 Identity = 98/102 (96.08%), Postives = 98/102 (96.08%), Query Frame = 0
BLAST of Carg06328 vs. NCBI nr
Match: XP_022146888.1 (uncharacterized protein LOC111015979 [Momordica charantia]) HSP 1 Score: 145.6 bits (366), Expect = 9.2e-32 Identity = 61/67 (91.04%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of Carg06328 vs. NCBI nr
Match: XP_023526413.1 (uncharacterized protein LOC111789921 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31 Identity = 85/101 (84.16%), Postives = 92/101 (91.09%), Query Frame = 0
BLAST of Carg06328 vs. NCBI nr
Match: XP_008438278.1 (PREDICTED: uncharacterized protein LOC103483439 [Cucumis melo]) HSP 1 Score: 139.8 bits (351), Expect = 5.0e-30 Identity = 59/68 (86.76%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Carg06328 vs. TAIR10
Match: AT5G47060.1 (Protein of unknown function (DUF581)) HSP 1 Score: 92.4 bits (228), Expect = 1.7e-19 Identity = 39/50 (78.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of Carg06328 vs. TAIR10
Match: AT2G44670.1 (Protein of unknown function (DUF581)) HSP 1 Score: 90.9 bits (224), Expect = 4.9e-19 Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0
BLAST of Carg06328 vs. TAIR10
Match: AT4G17670.1 (Protein of unknown function (DUF581)) HSP 1 Score: 87.4 bits (215), Expect = 5.4e-18 Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of Carg06328 vs. TAIR10
Match: AT1G22160.1 (Protein of unknown function (DUF581)) HSP 1 Score: 65.1 bits (157), Expect = 2.9e-11 Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 0
BLAST of Carg06328 vs. TAIR10
Match: AT1G78020.1 (Protein of unknown function (DUF581)) HSP 1 Score: 63.9 bits (154), Expect = 6.4e-11 Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of Carg06328 vs. Swiss-Prot
Match: sp|Q8LGS1|MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 6.5e-05 Identity = 18/41 (43.90%), Postives = 27/41 (65.85%), Query Frame = 0
BLAST of Carg06328 vs. TrEMBL
Match: tr|A0A1S3AW02|A0A1S3AW02_CUCME (uncharacterized protein LOC103483439 OS=Cucumis melo OX=3656 GN=LOC103483439 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.3e-30 Identity = 59/68 (86.76%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Carg06328 vs. TrEMBL
Match: tr|A0A0A0L3Z8|A0A0A0L3Z8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128930 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 4.4e-30 Identity = 89/104 (85.58%), Postives = 95/104 (91.35%), Query Frame = 0
BLAST of Carg06328 vs. TrEMBL
Match: tr|V4U942|V4U942_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10023758mg PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.7e-24 Identity = 74/99 (74.75%), Postives = 81/99 (81.82%), Query Frame = 0
BLAST of Carg06328 vs. TrEMBL
Match: tr|A0A067H0A5|A0A067H0A5_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g045147mg PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.7e-24 Identity = 74/99 (74.75%), Postives = 81/99 (81.82%), Query Frame = 0
BLAST of Carg06328 vs. TrEMBL
Match: tr|A0A2H5PZY9|A0A2H5PZY9_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_182860 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.1e-24 Identity = 73/95 (76.84%), Postives = 80/95 (84.21%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|