Carg13982 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13982
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ras GTPase-activating-like protein rng2 isoform 2
Location	Cucurbita_argyrosperma_scaffold_097 : 154411 .. 160151 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTTTGCAATTCATTGAGAGATCGAATTCGGCCATGGCTTCGTGATTATGACAGGCTTCAATCTTTCGCAGTTATTCTCATTTATATACAGGTGCATTCTTCCCCCTATCTCCGCCTTCTTTTCTTTGTTCTTCGTTATTTACGTTTTTTAATTCTTAATCTAATTTATCTACATACGTATGAGAAAGATCGGGTGCGCATTGGTTGGATCCCTAGGGGCATTGTACAACGGTGTATTACTTGTAAATTTGGCGATCGCATTATTTGCTTTGGTAGCCATCGAGAGCAGCAGTCAGAGTCTTGGCCGTACATATGCTGTTCTCCTGTTCTCTGCGATTTTCCTCGACATCTCCTGGTTCCTTCTTTTTGCCTACGACACATGGTCTCTCTCTAGCTCTCTCGTTTTAGTAATCCCAGCATGTTTAGTTTGTTTGAGAACGTGAGTCTGGACTGCTTGGTGAATTTAGCGATGTCTTGTCCTTGTCCATAGAGTAAAATTTGAAAGGATGCATACAGAACAAGTATGTTGTTATAGTATAATTCTACAAAGCATATTGATATGATTAGTATGATAGCCAGCATGATCCCTCCGCCCCTAAAAATGCATTTCCAACGTTGAAGCTGCTTATTATACTCCTACAGTTCTTAACTCTTTAACTAGTTGGATAATTTCATGATAAACCTTCCTCACCGGTCCATGGAAGCACTGCTGTATATGAGATAGATGAAGCTAATTTGATGAATGCAGAAACTTCACACTCAAAGTTGAAATTCTAATTCTGGACGAAATATGATTTTGAATTAGCTATGATTAATTAAAAAGGATTTTGAAGGGAGCTTTGATGTTGTATAGTTGCAACAATACTTGTACGTTTTATACGTTTTGAAGAAAGCTTCGATCTTGTATTGTTGGAGAGGGTTCTTTATTATTTATTTATTATATATATATTTTTTCTGTAAATACGTTTTGAACAATGCATTCTCCTGACACCCATCTTTGTGCCTGCATTTTCTTTTTTAATGTGCATCAAGTGCATACGTGCATAACGTGCTTCTAGATTGATGCATGATGCTGATTGCTGGCTATTTTACCCTGTTAATTGAATGAAAGATTGCTTATATGCAGGAACATCTCATCTGAGAAATATGGACCCTTTTTTACATTTTCAGTGAAGCTTACTCTAGCAATGCAGATTACTGGATTTTCTGTTAGACTATCGTCTTCACTACTGTGGATTCAAATTTACAGATTGGGGATTTCATACATGGAAACTCCAATCCCCCGAGAGGCAGATTATGATTTGAGAAATAGTTTTCTTAGCCCTGCTACTCCAGTTGCAGTTAGAGAGCCTTCAGTTTCTGATGATATAATAGGGGGCTCTATCTATGATCCAACTTATTACTCGTCCCTCTTCGAAGATGGTCAAGATAGTAAATGTCTGTCTGGGGTAACGTATCAATTTATTTTAAGCACTCTTTCATGCAACCGTCATTGATCCATTGTCATTCATTTACTAGTTCTAAATTTTCTGCTGCGATCCTATTGCTTTATCCATTTAGTTTTCCATGGTATTCTTTTTATATGTAGTTAATATCATACTGAATTTCAGTATTCAATTCTTACAAGATGAAGAGGGTTAGCCTTATTACAAGTTTCCTCTACTGAATAAAGTTTTTTTGTTTATAAATATTTTTGAAGAGCAAATAAAATTTTATCATTATTACTATTACTATTATTACTATTATTGTGGAAATCCACTTTATTAGGATGAATTGGAGCTAAACTGATTTCAAATGTCTTTAAAATTTGTATTGAATAGGTGACCTCTTCACAAAGTCTAATCTAAATCCTTGATGTTTGCTTATAAACCTAATACCATCGAGTAGGACCTTTGGATGAAGTGAATGGCGTCAATTCATCTCCATGAGTTCTTAGCTATATTAGACCTAATAGTGGGAGTGAGATGAAAGATCAAGCAAATGAGAGAGAATACTTACTAACAAACACTCTCCATGACCCGAGAGTCCTTGATGGTTTGTAATGTTCTAGTAGTAGATTACACAAAGTGCTCCCTTTCATCACTGATGACATGCAAATGGTTTATACAGGAGACAGACAAATCATGGATGCCATTTCTCTTGCAGCTGAATCATTAGATGATTACCATAGCAATAATAATAAAGGCTTCCTCCCCAAGATTTTTTCCCCTTTCGTTTGATAGGAGAGATCAATTTTGGAAAAGTATACGAGAAGTATATGAGAAGGTTGATGGATCCTCCACTTAGATATGATAATGGAGCGAAAAGGTTTCAGCCTTTAGATGGAGAAGTGGATCTACGACTCTCTCCACTACAATGGGAGGACTATTTGAGATATAAGGCAGGAGGATTTTCTTTCTCCTTTTCCTCTCTACTCTGGTGGTCGATTCTTGGAGTTGGTTTGTTGAAGTTAGTAAAAAAAAAAAAAAAGATAAGTTGGAAGGTTTTAAGACTGGAAAAGATTAAAGTGATGAAATTGTGATAGTTTCAAATTGATGAAATTGTGGCATTTGTTTGTTGAAGATCGTTGGCCCTCGAGCTTGAATATAAATATTCAATATTCCTCTTTGATCATGTGAATGTGGACAAAAAGCGTCTTCCTTCACATGTACTAGTGGATCCAAGTGTAGATAACATTAGTAAAAAGTTGGCTGAATGAAAAGGCTTCCTAATATTGAAGGCATGAAGACTTGCTATTGTTACTTGGTGCCTTCTGTTGTTCCTCTCTATTTCCTTAACATGGAAATTTGGTTATTCATAAAAGAAGGTAAACGACCCCTATTTGGAGTGCCCTAACAAATCTTTTTGTAATTGTCCCTCGTTCCTTGAGTGGAGGCCATTTTTTTACTCCTCCTTGTTAGGCTCAATGATGTGTGTCTAGGTTGTTGTTTTTAATAAAATCATTTTTTTTTAGTAATAACTTTGTTTCCTATCCAAAAAGGGAGACTTGAGAGGCCATAGGTTAGAATCTATATATCTCGAGTGAAAAGGGAGTCTTGATATGTTGTCTACATCTATAATCAGGGGAATAACAACTTTTAGGTCTTAATAATATACTAAGCATATATGAGGCAATAATACTTTTTATCAACAAAAATTTGATTTTTGTACTCCTCAAGCTGGATGATATATGCTAGTCATTTTGTTGAAGACCAACCCTACCATTGGTTCGTTGTAGAGCCTTGTAAATGTTTGCAACTTGTTATTAGGAAGACACATCTCTCAAGTTGATTATGTTTATTTCAATTATCTCATTGATGAAGTGAATCTATTTCACCATGCTTCATTTGGTCATTATGTATTTCGATATGCTTAATTCACCATTCATTGTCCGATAGGGAAATGACAGATGTTGTGGCTTTTTTTGTCTTTGATTGGGTAGTTTTCAGTTAGCCTTGGGAGGGACGATTATCGTCTTTGGGGTCTTAGTCCTCCTGAAGGATTTTCTTGTAGTTCCTTTGTTTCATTGCCTGGTGAACCCTCTTCCGATCAGCTCCTCCATCTTTTCCTTGCTGTAGAAAGCCAAAATTTCCTAGAAGGTTCAATTTTTTGTGTAGTATGACTTTCATGAAAATGTTCATATCTTAGATCGTGTTTCAAGGAAGTTGACGGTGGTGTAAAAGAACTAAAATATTAGAGGATAATAGCATTTGTATGCTTTCTTGTTTGGTGAGTATTCTATAAGGTACATTTCATGGATTGGGTATCAAGTTTTCTATGGTGTTGAGGATAGAGATAAACAAAGGCAATATTTTAGGCTACAATTGAGACATGAAAGTTTTTTACGGGTGTCTTGAACTTGAGAATGTAAAAGGACATTAGTTTTTGGAACAGTTTGCAGCTAGAACAACTTCACCTCACCCTGAAGGTGCGTTTTTTGCATTTTAACCACACTACTTTGTTGTGATGTGTCAACCCAAGAACTTTGTTGCGTAATGCCATGAGATTAAAGATAGTATCCAAGAGTAGAGTTGAAGAGATCACAACTTTTATTAGTTCATTACTTCTAAGTACTTTAATATTGATTTGAAACTGAATTAGGATCACTTTATGAAAGAATGAACTGTTAACTGGTTTCGAGTTATCTTTAAAATGTCCAACTCAAATGGGCGATCATCAACTAATAAAAGAAACCAACATGTTCCGGTGGCATTTATTTACCTCTTGAAGGTCCCTCCAATATCTCCATGAATAAGAGAGAAAGGTTGAGATGGTCTATTAGAATGAGGTAAAAGATGAATGTGCGTGTGTACGGAGAGTTGAAAGTTCTCACACTCAAAGAGTTTGCTATTTTATTAATTAACAAAGAAGGCTACATATACTTAAGGGAGAAAATAAAAAATTATGGTTGCAACCTCTGAGGGGGGGCCTCTTTTTTGCTCCGGATTGAGAAAAACATAGGCTCTTCAATAACAAAGTTAAGTCTGTTGGAAAGGTTCTCGGATCATGTTTTTGGTTGGTCTCTTTCAGTGTAAGTTCTATGCTCCATATAAAACGTAATGTTTCCCATCTTTCTGCCAATTGGAAGAGTTTGGTTTTCCTCCCCTTTCTGAAATTTCATGACCTGCATGTGCCTACACCTATATATTATTGAGCCTCATTCATGTCTTCTGTTTTTTCAATTGACTAACTAACCAATGATAGCATCATTTCTTGCTATTTCTATCTGTAGGTCTCCCATTTTGGTCATGGTGATAATGGTACTGCTTCTGGGTCAGATGTGTCTCGATCAAAGCTGCCCAGACATTTCCAAGTAGCGGACGTGAGTGTACTTATCTCAGATAATGGAATCTGTTAGTTATCAAGGCTTATAGAATTTAGTTCACTTTGCCTAACCAATGTTGTAAGGTAAAAACTTGTTATGTTTGGATATTTAACTGTGGATAGTAGCCGATGATGGAAGGTTCCTCCCCCCCCCCCCCCCACCTAAAAGTAAACGAGAGAAACTTGATGAGTTTATTGATTCTTTAGGCTGAGAAACTTGACTGGTGATTAGGCTTTGATTCGTACCCACGATCTCTAATCCTGTCACCTCCACTTAATATCATGTAGTATGCTTATTCGTTGATTCTTTAGGCGAAGAATTAATCGAGTCTTTAGGCGAAGAATTAATCGAGTCTTTAGGCGAAGAATTAATCGAGCCTTTAGGCGAAGATATATAGAAGGAGGATCAACTTTCACTAGTGCTTTGTTGATGTTCATCACTGCCCCAGATTGTTTCTGTGCCTCCACCCACCCCACATCCCACATGTTGATTTGATTCTAACTGGGTTAAATCTTTGTAGGATGAGCATGCAGCTGGACATCAGCAGCAGACGGTTTAGAGCCCCGAGTTGGCGAATTTGTTGACTATGATGTGCTCCTCCTGTTATTCTGATATGTCACAAATTCCGCTTTCAACCAACTACTACTACTACTACTACTACTCAGGTGCGGTTGGTTCACGTAGAGTCGTGTTTGTACAGCTTCGTATTATTAGATTTATAATTCTTTTTCCAGGATAAATTTTTTTCATTGAAGGAAGTTCTTGTACCGTTCGGCTCTGTGCTGAGTAAAAGAAATGCCATTGGCTTTGAAGTCTCAATAGGGAAAGAAGTTTTTGTATTATTTTCGGAAGGAACAAGGAAATAAGTTAAATAAAAAGTTCATTAAAAAGGTGGAAAATAGTGATCAAGATTGATGCTCAATTTGTTTGTT

mRNA sequence

ATGATGCTTTGCAATTCATTGAGAGATCGAATTCGGCCATGGCTTCGTGATTATGACAGGCTTCAATCTTTCGCAGTTATTCTCATTTATATACAGATCGGGTGCGCATTGGTTGGATCCCTAGGGGCATTGTACAACGGTGTATTACTTGTAAATTTGGCGATCGCATTATTTGCTTTGGTAGCCATCGAGAGCAGCAGTCAGAGTCTTGGCCGTACATATGCTGTTCTCCTGTTCTCTGCGATTTTCCTCGACATCTCCTGGTTCCTTCTTTTTGCCTACGACACATGGAACATCTCATCTGAGAAATATGGACCCTTTTTTACATTTTCAGTGAAGCTTACTCTAGCAATGCAGATTACTGGATTTTCTGTTAGACTATCGTCTTCACTACTGTGGATTCAAATTTACAGATTGGGGATTTCATACATGGAAACTCCAATCCCCCGAGAGGCAGATTATGATTTGAGAAATAGTTTTCTTAGCCCTGCTACTCCAGTTGCAGTTAGAGAGCCTTCAGTTTCTGATGATATAATAGGGGGCTCTATCTATGATCCAACTTATTACTCGTCCCTCTTCGAAGATGGTCAAGATAGTAAATGTCTGTCTGGGGTCTCCCATTTTGGTCATGGTGATAATGGTACTGCTTCTGGGTCAGATGTGTCTCGATCAAAGCTGCCCAGACATTTCCAAGTAGCGGACGATGAGCATGCAGCTGGACATCAGCAGCAGACGGTTTAGAGCCCCGAGTTGGCGAATTTGTTGACTATGATGTGCTCCTCCTGTTATTCTGATATGTCACAAATTCCGCTTTCAACCAACTACTACTACTACTACTACTACTCAGGTGCGGTTGGTTCACGTAGAGTCGTGTTTGTACAGCTTCGTATTATTAGATTTATAATTCTTTTTCCAGGATAAATTTTTTTCATTGAAGGAAGTTCTTGTACCGTTCGGCTCTGTGCTGAGTAAAAGAAATGCCATTGGCTTTGAAGTCTCAATAGGGAAAGAAGTTTTTGTATTATTTTCGGAAGGAACAAGGAAATAAGTTAAATAAAAAGTTCATTAAAAAGGTGGAAAATAGTGATCAAGATTGATGCTCAATTTGTTTGTT

Coding sequence (CDS)

ATGATGCTTTGCAATTCATTGAGAGATCGAATTCGGCCATGGCTTCGTGATTATGACAGGCTTCAATCTTTCGCAGTTATTCTCATTTATATACAGATCGGGTGCGCATTGGTTGGATCCCTAGGGGCATTGTACAACGGTGTATTACTTGTAAATTTGGCGATCGCATTATTTGCTTTGGTAGCCATCGAGAGCAGCAGTCAGAGTCTTGGCCGTACATATGCTGTTCTCCTGTTCTCTGCGATTTTCCTCGACATCTCCTGGTTCCTTCTTTTTGCCTACGACACATGGAACATCTCATCTGAGAAATATGGACCCTTTTTTACATTTTCAGTGAAGCTTACTCTAGCAATGCAGATTACTGGATTTTCTGTTAGACTATCGTCTTCACTACTGTGGATTCAAATTTACAGATTGGGGATTTCATACATGGAAACTCCAATCCCCCGAGAGGCAGATTATGATTTGAGAAATAGTTTTCTTAGCCCTGCTACTCCAGTTGCAGTTAGAGAGCCTTCAGTTTCTGATGATATAATAGGGGGCTCTATCTATGATCCAACTTATTACTCGTCCCTCTTCGAAGATGGTCAAGATAGTAAATGTCTGTCTGGGGTCTCCCATTTTGGTCATGGTGATAATGGTACTGCTTCTGGGTCAGATGTGTCTCGATCAAAGCTGCCCAGACATTTCCAAGTAGCGGACGATGAGCATGCAGCTGGACATCAGCAGCAGACGGTTTAG

Protein sequence

MMLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFALVAIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQITGFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIGGSIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAGHQQQTV

Homology

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BLAST of Carg13982 vs. NCBI nr
Match: XP_022958633.1 (uncharacterized protein LOC111459800 isoform X1 [Cucurbita moschata] >XP_022996434.1 uncharacterized protein LOC111491660 isoform X1 [Cucurbita maxima])

HSP 1 Score: 481.1 bits (1237), Expect = 2.3e-132
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MMLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFAL 60
           MMLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFAL
Sbjct: 1   MMLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFAL 60

Query: 61  VAIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQI 120
           VAIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQI
Sbjct: 61  VAIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQI 120

Query: 121 TGFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIG 180
           TGFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIG
Sbjct: 121 TGFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIG 180

Query: 181 GSIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAG 240
           GSIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAG
Sbjct: 181 GSIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAG 240

Query: 241 HQQQTV 247
           HQQQTV
Sbjct: 241 HQQQTV 246

[Close]

BLAST of Carg13982 vs. NCBI nr
Match: XP_023533647.1 (uncharacterized protein LOC111795446 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 477.2 bits (1227), Expect = 3.3e-131
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MMLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFAL 60
           MMLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFAL
Sbjct: 1   MMLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFAL 60

Query: 61  VAIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQI 120
           VAIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQI
Sbjct: 61  VAIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQI 120

Query: 121 TGFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIG 180
           TGFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIG
Sbjct: 121 TGFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIG 180

Query: 181 GSIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAG 240
           GSIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAG
Sbjct: 181 GSIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAG 240

Query: 241 HQQQ 245
           HQQQ
Sbjct: 241 HQQQ 244

[Close]

BLAST of Carg13982 vs. NCBI nr
Match: XP_004149633.1 (PREDICTED: uncharacterized protein LOC101215314 isoform X1 [Cucumis sativus] >KGN54008.1 hypothetical protein Csa_4G266940 [Cucumis sativus])

HSP 1 Score: 435.3 bits (1118), Expect = 1.4e-118
Identity = 218/242 (90.08%), Postives = 232/242 (95.87%), Query Frame = 0


Query: 2   MLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFALV 61
           MLCNSLRDR+RPWLRDYDRLQSFAVILIYIQIGCAL+GSLGALYNGVLL+NLAIALFALV
Sbjct: 1   MLCNSLRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALV 60

Query: 62  AIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQIT 121
           AIESSSQSLGRTYAVLLFSAIFLD+ WF+LFAYDTWNISS++YGP FTFSVKLTLAMQI 
Sbjct: 61  AIESSSQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNISSKQYGPLFTFSVKLTLAMQII 120

Query: 122 GFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIGG 181
           GFSVRLSSSLLWIQIYRLGISYMET +PREADYDLRNSFLSPATPV VR+PS SDD+IGG
Sbjct: 121 GFSVRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGG 180

Query: 182 SIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAGH 241
           SIYDPTYYSSLFEDGQDSKCLSG+SHFG+GDNG+ SG DVSRSKL RHFQVADDE+A GH
Sbjct: 181 SIYDPTYYSSLFEDGQDSKCLSGISHFGNGDNGSTSGPDVSRSKLSRHFQVADDEYADGH 240

Query: 242 QQ 244
           QQ
Sbjct: 241 QQ 242

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BLAST of Carg13982 vs. NCBI nr
Match: XP_008449916.1 (PREDICTED: uncharacterized protein LOC103491645 isoform X4 [Cucumis melo])

HSP 1 Score: 431.8 bits (1109), Expect = 1.6e-117
Identity = 218/242 (90.08%), Postives = 231/242 (95.45%), Query Frame = 0


Query: 2   MLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFALV 61
           MLCNSLRDR+RP LRDYDRLQSFAVILIYIQIGCAL+GSLGALYNGVLL+NLAIALFALV
Sbjct: 1   MLCNSLRDRLRPCLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALV 60

Query: 62  AIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQIT 121
           AIESSSQSLGRTYAVLLFSAIFLD+ WF+LFAYDTWNISSE+YGP FTFSVKLTLAMQI 
Sbjct: 61  AIESSSQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNISSEQYGPLFTFSVKLTLAMQII 120

Query: 122 GFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIGG 181
           GFSVRLSSSLLWIQIYRLGISYMET +PREADYDLRNSFLSPATPV VR+PS SDD+IGG
Sbjct: 121 GFSVRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGG 180

Query: 182 SIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAGH 241
           SIYDPTYYSSLFEDGQDSKCLSG+SHFG+GDNG+ SG DVSRSKL RHFQVADDE+A GH
Sbjct: 181 SIYDPTYYSSLFEDGQDSKCLSGISHFGNGDNGSTSGPDVSRSKLSRHFQVADDEYADGH 240

Query: 242 QQ 244
           QQ
Sbjct: 241 QQ 242

[Close]

BLAST of Carg13982 vs. NCBI nr
Match: XP_022144718.1 (uncharacterized protein LOC111014335 isoform X1 [Momordica charantia] >XP_022144724.1 uncharacterized protein LOC111014335 isoform X1 [Momordica charantia] >XP_022144732.1 uncharacterized protein LOC111014335 isoform X1 [Momordica charantia] >XP_022144739.1 uncharacterized protein LOC111014335 isoform X1 [Momordica charantia] >XP_022144748.1 uncharacterized protein LOC111014335 isoform X1 [Momordica charantia] >XP_022144755.1 uncharacterized protein LOC111014335 isoform X1 [Momordica charantia])

HSP 1 Score: 424.1 bits (1089), Expect = 3.3e-115
Identity = 212/243 (87.24%), Postives = 228/243 (93.83%), Query Frame = 0


Query: 1   MMLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFAL 60
           MMLCNSLRDR+RPWLRDYDRLQSFAVILIYIQIGCAL+GSLGALYNGVLL+NLAIALFAL
Sbjct: 1   MMLCNSLRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFAL 60

Query: 61  VAIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQI 120
           VAIESSSQSLGRTYAVLL SAIFLDI WF+LFAYDTWNISS++YGP F+FSVKLTLAMQI
Sbjct: 61  VAIESSSQSLGRTYAVLLLSAIFLDIFWFILFAYDTWNISSKQYGPLFSFSVKLTLAMQI 120

Query: 121 TGFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIG 180
            GFS+RLSSSLLWIQIYRLGISYMET +PREADYDLRNSFLSP TPV  R+ S SDD+IG
Sbjct: 121 IGFSIRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPTTPVVARQTSGSDDMIG 180

Query: 181 GSIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAG 240
           GSIYDP YYSSLFEDGQDSKCLSG+SHFG+GDNG+ SG DVSRSK+ RHFQV DDEHAAG
Sbjct: 181 GSIYDPAYYSSLFEDGQDSKCLSGISHFGNGDNGSTSGLDVSRSKISRHFQVVDDEHAAG 240

Query: 241 HQQ 244
           +QQ
Sbjct: 241 NQQ 243

[Close]

BLAST of Carg13982 vs. TAIR10
Match: AT1G55535.1 (unknown protein)

HSP 1 Score: 298.5 bits (763), Expect = 3.8e-81
Identity = 156/241 (64.73%), Postives = 189/241 (78.42%), Query Frame = 0


Query: 1   MMLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFAL 60
           MMLC SLRDRI PWLRDY +LQS AV LIY QIGCAL+GSLGALYNGVLL+NLAIALFAL
Sbjct: 1   MMLCGSLRDRIHPWLRDYVKLQSLAVFLIYAQIGCALIGSLGALYNGVLLINLAIALFAL 60

Query: 61  VAIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQI 120
           VAIES+SQSLGRTYAVLLF A+ LDISWF+LF  + W+IS+E YG FF FSVKLT+AM++
Sbjct: 61  VAIESNSQSLGRTYAVLLFCALLLDISWFILFTEEIWSISAETYGTFFIFSVKLTMAMEM 120

Query: 121 TGFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIG 180
            GF VRLSSSLLW QIYRLG + ++T +PRE D DLRNSFL+P TP   R+ S +++I+G
Sbjct: 121 IGFFVRLSSSLLWFQIYRLGAAIVDTSLPRETDSDLRNSFLNPPTPAIARQCSGAEEILG 180

Query: 181 GSIYDPTYYSSLFEDGQ---DSKCLSGVSHFGHGDNGTASGSDVSRSKLP--RHFQVADD 237
           GSIYDP YY+SLFE+ Q   +S   + V+H+  G+NG+ S ++ S  K P  R     D+
Sbjct: 181 GSIYDPAYYTSLFEESQTNINSPKATQVNHYSAGNNGSPSAAEASHIKSPIFRSLHSIDE 240

[Close]

BLAST of Carg13982 vs. TAIR10
Match: AT3G13420.1 (unknown protein)

HSP 1 Score: 235.0 bits (598), Expect = 5.1e-62
Identity = 122/170 (71.76%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 2   MLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFALV 61
           MLC SLR+RI  WLRDY RLQS  +ILIY QIGCAL+GSLGALYNGV+L+NLAIALF LV
Sbjct: 1   MLCVSLRNRIHNWLRDYVRLQSVVLILIYAQIGCALIGSLGALYNGVVLINLAIALFGLV 60

Query: 62  AIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQIT 121
           AIES+SQSLGRTYAVLLF AI LD+SWF+LF+ + WNISS+ Y  F+ FSVKLTLAM+I 
Sbjct: 61  AIESNSQSLGRTYAVLLFCAILLDVSWFILFSKEIWNISSDMYQVFYIFSVKLTLAMEIA 120

Query: 122 GFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVRE 172
           GF VRLSSSLLW QIYRLG S +++P PR++D DLRNSFL P  P+  R+
Sbjct: 121 GFVVRLSSSLLWFQIYRLGASIIDSPFPRQSDSDLRNSFLEP--PLLARQ 168

[Close]

BLAST of Carg13982 vs. TrEMBL
Match: tr|A0A0A0KWY7|A0A0A0KWY7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G266940 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 9.4e-119
Identity = 218/242 (90.08%), Postives = 232/242 (95.87%), Query Frame = 0


Query: 2   MLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFALV 61
           MLCNSLRDR+RPWLRDYDRLQSFAVILIYIQIGCAL+GSLGALYNGVLL+NLAIALFALV
Sbjct: 1   MLCNSLRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALV 60

Query: 62  AIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQIT 121
           AIESSSQSLGRTYAVLLFSAIFLD+ WF+LFAYDTWNISS++YGP FTFSVKLTLAMQI 
Sbjct: 61  AIESSSQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNISSKQYGPLFTFSVKLTLAMQII 120

Query: 122 GFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIGG 181
           GFSVRLSSSLLWIQIYRLGISYMET +PREADYDLRNSFLSPATPV VR+PS SDD+IGG
Sbjct: 121 GFSVRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGG 180

Query: 182 SIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAGH 241
           SIYDPTYYSSLFEDGQDSKCLSG+SHFG+GDNG+ SG DVSRSKL RHFQVADDE+A GH
Sbjct: 181 SIYDPTYYSSLFEDGQDSKCLSGISHFGNGDNGSTSGPDVSRSKLSRHFQVADDEYADGH 240

Query: 242 QQ 244
           QQ
Sbjct: 241 QQ 242

[Close]

BLAST of Carg13982 vs. TrEMBL
Match: tr|A0A1S3BMI4|A0A1S3BMI4_CUCME (uncharacterized protein LOC103491645 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103491645 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.0e-117
Identity = 218/242 (90.08%), Postives = 231/242 (95.45%), Query Frame = 0


Query: 2   MLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFALV 61
           MLCNSLRDR+RP LRDYDRLQSFAVILIYIQIGCAL+GSLGALYNGVLL+NLAIALFALV
Sbjct: 1   MLCNSLRDRLRPCLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALV 60

Query: 62  AIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQIT 121
           AIESSSQSLGRTYAVLLFSAIFLD+ WF+LFAYDTWNISSE+YGP FTFSVKLTLAMQI 
Sbjct: 61  AIESSSQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNISSEQYGPLFTFSVKLTLAMQII 120

Query: 122 GFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIGG 181
           GFSVRLSSSLLWIQIYRLGISYMET +PREADYDLRNSFLSPATPV VR+PS SDD+IGG
Sbjct: 121 GFSVRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGG 180

Query: 182 SIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAGH 241
           SIYDPTYYSSLFEDGQDSKCLSG+SHFG+GDNG+ SG DVSRSKL RHFQVADDE+A GH
Sbjct: 181 SIYDPTYYSSLFEDGQDSKCLSGISHFGNGDNGSTSGPDVSRSKLSRHFQVADDEYADGH 240

Query: 242 QQ 244
           QQ
Sbjct: 241 QQ 242

[Close]

BLAST of Carg13982 vs. TrEMBL
Match: tr|A0A1S3BP27|A0A1S3BP27_CUCME (uncharacterized protein LOC103491645 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491645 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 5.3e-114
Identity = 212/239 (88.70%), Postives = 225/239 (94.14%), Query Frame = 0


Query: 2   MLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFALV 61
           MLCNSLRDR+RP LRDYDRLQSFAVILIYIQIGCAL+GSLGALYNGVLL+NLAIALFALV
Sbjct: 1   MLCNSLRDRLRPCLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALV 60

Query: 62  AIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQIT 121
           AIESSSQSLGRTYAVLLFSAIFLD+ WF+LFAYDTWNISSE+YGP FTFSVKLTLAMQI 
Sbjct: 61  AIESSSQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNISSEQYGPLFTFSVKLTLAMQII 120

Query: 122 GFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIGG 181
           GFSVRLSSSLLWIQIYRLGISYMET +PREADYDLRNSFLSPATPV VR+PS SDD+IGG
Sbjct: 121 GFSVRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGG 180

Query: 182 SIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAG 241
           SIYDPTYYSSLFEDGQDSKCLSG+SHFG+GDNG+ SG DVSRSKL RHFQVAD +   G
Sbjct: 181 SIYDPTYYSSLFEDGQDSKCLSGISHFGNGDNGSTSGPDVSRSKLSRHFQVADGDRRLG 239

[Close]

BLAST of Carg13982 vs. TrEMBL
Match: tr|A0A1S3BN54|A0A1S3BN54_CUCME (uncharacterized protein LOC103491645 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103491645 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.5e-113
Identity = 211/233 (90.56%), Postives = 223/233 (95.71%), Query Frame = 0


Query: 2   MLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFALV 61
           MLCNSLRDR+RP LRDYDRLQSFAVILIYIQIGCAL+GSLGALYNGVLL+NLAIALFALV
Sbjct: 1   MLCNSLRDRLRPCLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALV 60

Query: 62  AIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQIT 121
           AIESSSQSLGRTYAVLLFSAIFLD+ WF+LFAYDTWNISSE+YGP FTFSVKLTLAMQI 
Sbjct: 61  AIESSSQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNISSEQYGPLFTFSVKLTLAMQII 120

Query: 122 GFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIGG 181
           GFSVRLSSSLLWIQIYRLGISYMET +PREADYDLRNSFLSPATPV VR+PS SDD+IGG
Sbjct: 121 GFSVRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGG 180

Query: 182 SIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVAD 235
           SIYDPTYYSSLFEDGQDSKCLSG+SHFG+GDNG+ SG DVSRSKL RHFQVAD
Sbjct: 181 SIYDPTYYSSLFEDGQDSKCLSGISHFGNGDNGSTSGPDVSRSKLSRHFQVAD 233

[Close]

BLAST of Carg13982 vs. TrEMBL
Match: tr|A0A1S4DXR3|A0A1S4DXR3_CUCME (uncharacterized protein LOC103491645 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491645 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.5e-113
Identity = 214/243 (88.07%), Postives = 228/243 (93.83%), Query Frame = 0


Query: 2   MLCNSLRDRIRPWLRDYDRLQSFAVILIYIQIGCALVGSLGALYNGVLLVNLAIALFALV 61
           MLCNSLRDR+RP LRDYDRLQSFAVILIYIQIGCAL+GSLGALYNGVLL+NLAIALFALV
Sbjct: 1   MLCNSLRDRLRPCLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALV 60

Query: 62  AIESSSQSLGRTYAVLLFSAIFLDISWFLLFAYDTWNISSEKYGPFFTFSVKLTLAMQIT 121
           AIESSSQSLGRTYAVLLFSAIFLD+ WF+LFAYDTWNISSE+YGP FTFSVKLTLAMQI 
Sbjct: 61  AIESSSQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNISSEQYGPLFTFSVKLTLAMQII 120

Query: 122 GFSVRLSSSLLWIQIYRLGISYMETPIPREADYDLRNSFLSPATPVAVREPSVSDDIIGG 181
           GFSVRLSSSLLWIQIYRLGISYMET +PREADYDLRNSFLSPATPV VR+PS SDD+IGG
Sbjct: 121 GFSVRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGG 180

Query: 182 SIYDPTYYSSLFEDGQDSKCLSGVSHFGHGDNGTASGSDVSRSKLPRHFQVADDEHAAGH 241
           SIYDPTYYSSLFEDGQDSKCLSG+SHFG+GDNG+ SG DVSRSKL RHFQVAD  +   H
Sbjct: 181 SIYDPTYYSSLFEDGQDSKCLSGISHFGNGDNGSTSGPDVSRSKLSRHFQVADG-YRQKH 240

Query: 242 QQQ 245
           QQ+
Sbjct: 241 QQK 242

The following BLAST results are available for this feature:

BLAST of Carg13982 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958633.1	2.3e-132	100.00	uncharacterized protein LOC111459800 isoform X1 [Cucurbita moschata] >XP_0229964...	[more]
XP_023533647.1	3.3e-131	100.00	uncharacterized protein LOC111795446 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_004149633.1	1.4e-118	90.08	PREDICTED: uncharacterized protein LOC101215314 isoform X1 [Cucumis sativus] >KG...	[more]
XP_008449916.1	1.6e-117	90.08	PREDICTED: uncharacterized protein LOC103491645 isoform X4 [Cucumis melo]	[more]
XP_022144718.1	3.3e-115	87.24	uncharacterized protein LOC111014335 isoform X1 [Momordica charantia] >XP_022144...	[more]

BLAST of Carg13982 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55535.1	3.8e-81	64.73	unknown protein	[more]
AT3G13420.1	5.1e-62	71.76	unknown protein	[more]

BLAST of Carg13982 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg13982 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KWY7\|A0A0A0KWY7_CUCSA	9.4e-119	90.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G266940 PE=4 SV=1	[more]
tr\|A0A1S3BMI4\|A0A1S3BMI4_CUCME	1.0e-117	90.08	uncharacterized protein LOC103491645 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BP27\|A0A1S3BP27_CUCME	5.3e-114	88.70	uncharacterized protein LOC103491645 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BN54\|A0A1S3BN54_CUCME	1.5e-113	90.56	uncharacterized protein LOC103491645 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S4DXR3\|A0A1S4DXR3_CUCME	1.5e-113	88.07	uncharacterized protein LOC103491645 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13982-RA	Carg13982-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35471	FAMILY NOT NAMED	coord: 1..239

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13982	Cla003120	Watermelon (97103) v1	carwmB0505
Carg13982	Csa4G266940	Cucumber (Chinese Long) v2	carcuB0535
Carg13982	MELO3C014738	Melon (DHL92) v3.5.1	carmeB0512
Carg13982	ClCG02G024480	Watermelon (Charleston Gray)	carwcgB0493
Carg13982	CSPI04G12400	Wild cucumber (PI 183967)	carcpiB0542
Carg13982	Cucsa.152580	Cucumber (Gy14) v1	carcgyB0580
Carg13982	CmaCh02G011590	Cucurbita maxima (Rimu)	carcmaB0716
Carg13982	CmoCh02G011930	Cucurbita moschata (Rifu)	carcmoB0694
Carg13982	Lsi10G009090	Bottle gourd (USVL1VR-Ls)	carlsiB458
Carg13982	Cp4.1LG05g05780	Cucurbita pepo (Zucchini)	carcpeB0718
Carg13982	CsGy4G011870	Cucumber (Gy14) v2	carcgybB0511
Carg13982	MELO3C031044.2	Melon (DHL92) v3.6.1	carmedB0518
Carg13982	CsaV3_4G017680	Cucumber (Chinese Long) v3	carcucB0539
Carg13982	Cla97C02G050730	Watermelon (97103) v2	carwmbB0531
Carg13982	Bhi10G000409	Wax gourd	carwgoB0618

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None