Carg13968 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13968
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Zeaxanthin epoxidase, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_097 : 2692 .. 5356 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCACAGTCCATTCCATTTCCCGCCCCAACCTCCCTCTCCCTCTTTCCTTCTCCATTCATTCATCTTCCCCTTCCAATTCCCTTACTCCATACCCACACACAAGAACCAAATCAACCGCCTCCGTCCTTCCGCCATTGTTGCTGCGTTCTGATCTCAATCTCACCTTCAAATCAAGGGGACGATCACTTCTTCAACCTCCACGAGCTTCTCAGTCTGAATTCGAGCCTCAATCTTCTTCTGTCCGCTGGCTTCTCGTTCCCGTTGGTTAGCGCATTCTGAATCTCTACCATTGTTCTGTTCGATTGTATCTTATATTTGATTTGAAGATTTCGTGATTTCTTCACAGGCGATGGCGATTGGAAACATATCGGTTCCAAAGTTGAAATGCCTGATGCGTTTGAAATCGTCTCGGTCAGTACTTTTCATTGAGGCTCTTCAGCCCTTGCGAGTCTCTATTGTGTGATATTCGAGCTCGTTTTAACTCTTTTTGGCTGTCGAAACTCATCTTAATGCAGAATGAGGTCACTGTTGGGCGCCTTCCTGAGAAAGCTGACATTGCAATTCCAGTTGCTACAGGTGAGTTTACTCCAAACATCTGTTGCTACTTGTTTGATTTGATGCTTTCAATTCAATTGCTACAGATCTGACAGTTTCAAGTTTTCCTTTGAGTTTTTGGAATGCAGAACTTGTGGATTGTATTGTGCCACTAACTTCACTGCGATTTTCTGAAATGAAAACAGTTTCTGCTGTACATGCTCGCATCAAAAAGCAAGAAGACAGGCTTTTAGTCATAGATCTAGACAGCACAAATGGAACTTTTATTGATGATAAGAGACTCAAGCCTGGAGTTGTTGCTGCTGTATCATCTGGGAATTGCATTTCTTTTGGTAACTTGCCCCCTCAAACTCAATCCAAATTTAATTGTTAGGCTGGTTGGATCACCTCACACTTTCTTATAACAGATTTCATATTTCTCAAGTAAACATTTAAGTTCTTAGCTTGAAGCGTGAAAACATCACTAGAATATATATATATATATATATATATGTCTAAAACAGAGATATCTATAGATTGAAGTAGTGTTTATTAGTTTATATGGAAAAACCAAATGGTCATGAGGCTTAAAATTTTCTTTGAAGGTGAAGGATCTCATTTGCTGTTTTTCGGTTTCGGTTTGGTGAATGCATTTGGTTATGATTATTAGACCATTCAAATCATTGTAGGGTATCTGAGATAGTTAGTCGTCTAAGCTCACCGCTAGTAGATATTTGTCCATTTTGACTCGTTACGTATCGTTGTCAGGCTTACAGTTTTAAATGCGTTTACTAAGGAGATGTTTCCACACTCTTATAAGAAATGTTTCATATCCCTCTCCAACCAACGTGCGATCTCTCATAATTGGACTCGAAATTCATTATAATCGCTACTCAAATCCTAGCACTTGACTCATCCTCTTTGTAAGGCTAAACAAGAGAACCTCTTAGAAAATACTGTGACTTGTGTCTATACATTATTATTGGCTTGAATTCATGAATTGGGTGGCTATACATTGAGTTTATTCTGTATTTTGTTTTGTGGTACAACTCGACTTGCATAGTGTAAATAACTTCAAAATTTTACATGCAGTCAGCTTTGTTGGAGGATGAAAATTTCACGTTGGCTAATTTAGGGAATGATGATGGGTTTATAAGTGAGGAATACTAACTCCATTGGTATGAGGCCTTTTCGGAGAAACCCAAAGCAAAGCCATGAGAGTTTACACTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACATGGTATTAGAGTCATCCCCTGAACTTAGTCGTGCCAATAGATTGGTAAATCCTCAAATGTTGAAGAAAGGACTCCAAAAGAAAAAGAGTTGAGCCTCCTCAAAGGCATAGTAAAAAATGACTAAGACTCCAAAAGAAAAAGGAGTCGAGCCTCGATTAAAGGGAGGCGTACTTTGTTCGATGGGAGGCGTGGGATGATGAAAGTCCCACATTAGCTAATTTAAGAAATGATAATGAGTTTATAAGTGAGGAATACTAACTCCGTTGGTACGAGGCCTTTTGGGGAAGCCCAAAATAAAGTCACGAGAGCTTATGCTCAAAGTGGACAATATCATACTATTACAGAGAGTCGTGTTCATCTAACAAGCTTAATTGATTAACTTTGGGATATCTCTTTTGTTGACAGGGGACATCCATCTAGCCATGTTTCAGGTGTCAAAGTTAAAGACTGATAAAGCCGCTAGCAAAATCCAAGAATCTGAGGACTCAATCGGTAACTCTGAAACAAGTTAAAAAAATGGTACATTTACATGTCTTCTAAGAGCAAATATGTGCAAAATTCTGCACATTCTGTATCGTAACAGTAATCTTTGCATGAAATTTTTCATATGAGTTGAAGAATATTGAAGAGCTAACGAGTCATCTGATCTCACTATTTGTTTTTTTAAGGCCATTTTAGAATACATCCATTTGATCCAAGCTATACTATCTAACCCTTTAAAAGAGTCCGATATGATAGAGCCTCCGCTTAAGATTCAAGTCAGGATTTAGAGTTTGGCCCCTACATCTTTCAAAGAGTTAAAAGCTATTCCTACAAATCAATATTCGGATTCTTTTAGTATATTTTA

mRNA sequence

ATGGAGTTCACAGTCCATTCCATTTCCCGCCCCAACCTCCCTCTCCCTCTTTCCTTCTCCATTCATTCATCTTCCCCTTCCAATTCCCTTACTCCATACCCACACACAAGAACCAAATCAACCGCCTCCGTCCTTCCGCCATTGTTGCTGCGTTCTGATCTCAATCTCACCTTCAAATCAAGGGGACGATCACTTCTTCAACCTCCACGAGCTTCTCAGTCTGAATTCGAGCCTCAATCTTCTTCTGTCCGCTGGCTTCTCGTTCCCGTTGGCGATGGCGATTGGAAACATATCGGTTCCAAAGTTGAAATGCCTGATGCGTTTGAAATCGTCTCGAATGAGGTCACTGTTGGGCGCCTTCCTGAGAAAGCTGACATTGCAATTCCAGTTGCTACAGAACTTGTGGATTGTATTGTGCCACTAACTTCACTGCGATTTTCTGAAATGAAAACAGTTTCTGCTGTACATGCTCGCATCAAAAAGCAAGAAGACAGGCTTTTAGTCATAGATCTAGACAGCACAAATGGAACTTTTATTGATGATAAGAGACTCAAGCCTGGAGTTGTTGCTGCTGTATCATCTGGGAATTGCATTTCTTTTGGGGACATCCATCTAGCCATGTTTCAGGTGTCAAAGTTAAAGACTGATAAAGCCGCTAGCAAAATCCAAGAATCTGAGGACTCAATCGGTAACTCTGAAACAAGTTAAAAAAATGGTACATTTACATGTCTTCTAAGAGCAAATATGTGCAAAATTCTGCACATTCTGTATCGTAACAGTAATCTTTGCATGAAATTTTTCATATGAGTTGAAGAATATTGAAGAGCTAACGAGTCATCTGATCTCACTATTTGTTTTTTTAAGGCCATTTTAGAATACATCCATTTGATCCAAGCTATACTATCTAACCCTTTAAAAGAGTCCGATATGATAGAGCCTCCGCTTAAGATTCAAGTCAGGATTTAGAGTTTGGCCCCTACATCTTTCAAAGAGTTAAAAGCTATTCCTACAAATCAATATTCGGATTCTTTTAGTATATTTTA

Coding sequence (CDS)

ATGGAGTTCACAGTCCATTCCATTTCCCGCCCCAACCTCCCTCTCCCTCTTTCCTTCTCCATTCATTCATCTTCCCCTTCCAATTCCCTTACTCCATACCCACACACAAGAACCAAATCAACCGCCTCCGTCCTTCCGCCATTGTTGCTGCGTTCTGATCTCAATCTCACCTTCAAATCAAGGGGACGATCACTTCTTCAACCTCCACGAGCTTCTCAGTCTGAATTCGAGCCTCAATCTTCTTCTGTCCGCTGGCTTCTCGTTCCCGTTGGCGATGGCGATTGGAAACATATCGGTTCCAAAGTTGAAATGCCTGATGCGTTTGAAATCGTCTCGAATGAGGTCACTGTTGGGCGCCTTCCTGAGAAAGCTGACATTGCAATTCCAGTTGCTACAGAACTTGTGGATTGTATTGTGCCACTAACTTCACTGCGATTTTCTGAAATGAAAACAGTTTCTGCTGTACATGCTCGCATCAAAAAGCAAGAAGACAGGCTTTTAGTCATAGATCTAGACAGCACAAATGGAACTTTTATTGATGATAAGAGACTCAAGCCTGGAGTTGTTGCTGCTGTATCATCTGGGAATTGCATTTCTTTTGGGGACATCCATCTAGCCATGTTTCAGGTGTCAAAGTTAAAGACTGATAAAGCCGCTAGCAAAATCCAAGAATCTGAGGACTCAATCGGTAACTCTGAAACAAGTTAA

Protein sequence

MEFTVHSISRPNLPLPLSFSIHSSSPSNSLTPYPHTRTKSTASVLPPLLLRSDLNLTFKSRGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRLPEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFIDDKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS

Homology

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BLAST of Carg13968 vs. NCBI nr
Match: XP_023532653.1 (uncharacterized protein LOC111794752 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.6 bits (976), Expect = 4.0e-102
Identity = 202/235 (85.96%), Postives = 204/235 (86.81%), Query Frame = 0


Query: 1   MEFTVHSISRPNLPLPLSXXXXXXXXXXXLTPYPHTRTKSTASVLPPLLLRSDLNLTFKS 60
           MEFTVHSISRPNLPLPLS           LTPYPHTRTK+TAS+LPPLLLRSDLNLTFKS
Sbjct: 1   MEFTVHSISRPNLPLPLSFSIYSSSPSNSLTPYPHTRTKATASILPPLLLRSDLNLTFKS 60

Query: 61  RGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL 120
           RGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL
Sbjct: 61  RGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL 120

Query: 121 PEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFID 180
           PEKADIAIPVA                   TVSAVHARIKKQEDRLLVIDLDSTNGTFID
Sbjct: 121 PEKADIAIPVA-------------------TVSAVHARIKKQEDRLLVIDLDSTNGTFID 180

Query: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS 236
           DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDS GNSETS
Sbjct: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSNGNSETS 216

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BLAST of Carg13968 vs. NCBI nr
Match: XP_022996302.1 (uncharacterized protein LOC111491570 [Cucurbita maxima])

HSP 1 Score: 377.9 bits (969), Expect = 2.6e-101
Identity = 201/235 (85.53%), Postives = 203/235 (86.38%), Query Frame = 0


Query: 1   MEFTVHSISRPNLPLPLSXXXXXXXXXXXLTPYPHTRTKSTASVLPPLLLRSDLNLTFKS 60
           MEFTVHSISRPNLPLPLS           LTPYPHTRTKSTAS+LPPLLLRSDLNLTFKS
Sbjct: 1   MEFTVHSISRPNLPLPLSFSLHSSSPSNSLTPYPHTRTKSTASILPPLLLRSDLNLTFKS 60

Query: 61  RGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL 120
           RGRSLLQP RA QSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNE+TVGRL
Sbjct: 61  RGRSLLQPLRAFQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEITVGRL 120

Query: 121 PEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFID 180
           PEKADIAIPVA                   TVSAVHARIKKQEDRLLVIDLDSTNGTFID
Sbjct: 121 PEKADIAIPVA-------------------TVSAVHARIKKQEDRLLVIDLDSTNGTFID 180

Query: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS 236
           DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS
Sbjct: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS 216

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BLAST of Carg13968 vs. NCBI nr
Match: XP_022957686.1 (uncharacterized protein LOC111459151 [Cucurbita moschata])

HSP 1 Score: 374.8 bits (961), Expect = 2.2e-100
Identity = 200/235 (85.11%), Postives = 203/235 (86.38%), Query Frame = 0


Query: 1   MEFTVHSISRPNLPLPLSXXXXXXXXXXXLTPYPHTRTKSTASVLPPLLLRSDLNLTFKS 60
           MEFTVHSISRPNLPLPLS           LTPYPHTRTK+TAS+LPPLLLRSDLNLTFKS
Sbjct: 1   MEFTVHSISRPNLPLPLSFSTYSSSPSNSLTPYPHTRTKATASILPPLLLRSDLNLTFKS 60

Query: 61  RGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL 120
           R RSLLQP RASQSEFEP+SSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL
Sbjct: 61  RRRSLLQPLRASQSEFEPRSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL 120

Query: 121 PEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFID 180
           PEKADIAIPVA                   TVSAVHARIKKQEDRLLVIDLDSTNGTFID
Sbjct: 121 PEKADIAIPVA-------------------TVSAVHARIKKQEDRLLVIDLDSTNGTFID 180

Query: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS 236
           DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS
Sbjct: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS 216

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BLAST of Carg13968 vs. NCBI nr
Match: XP_016900711.1 (PREDICTED: uncharacterized protein LOC103491680 isoform X1 [Cucumis melo])

HSP 1 Score: 234.2 bits (596), Expect = 4.6e-58
Identity = 137/206 (66.50%), Postives = 150/206 (72.82%), Query Frame = 0


Query: 31  TPYPHTRTKSTASVLPPLLLRSDLNLTFKSRGRSLLQPPRASQSEFEPQSSSVRWLLVPV 90
           TP  H  T S  S  P LL R  L++ F+ RGRSLL+  +AS           RWLLVPV
Sbjct: 19  TPSLHRSTLSGLS--PSLLPRLSLSIQFRPRGRSLLRHIQASS----------RWLLVPV 78

Query: 91  GDGDWKHIGSKVEMPDAFEIVSNEVTVGRLPEKADIAIPVATELVDCIVPLTSLRFSEMK 150
           GDG+WKHIGSKVEMPDAFEIVSNEVTVGRLP+KADI IPVA                   
Sbjct: 79  GDGEWKHIGSKVEMPDAFEIVSNEVTVGRLPDKADIVIPVA------------------- 138

Query: 151 TVSAVHARIKKQEDRLLVIDLDSTNGTFIDDKRLKPGVVAAVSSGNCISFGDIHLAMFQV 210
           TVS  HARIK QED+LLVIDLDSTNGTFIDDKRL PGVVAAVSSGNCI+FGDIHLAMFQV
Sbjct: 139 TVSGQHARIKNQEDKLLVIDLDSTNGTFIDDKRLNPGVVAAVSSGNCITFGDIHLAMFQV 193

Query: 211 SKLKTDKAASKIQ-ESEDSIGNSETS 236
           SKLKT +AASKIQ E+E+ I +SETS
Sbjct: 199 SKLKTVEAASKIQEETEEPISDSETS 193

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BLAST of Carg13968 vs. NCBI nr
Match: XP_004149650.1 (PREDICTED: uncharacterized protein LOC101219513 isoform X1 [Cucumis sativus] >KGN54033.1 hypothetical protein Csa_4G269160 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 3.9e-57
Identity = 130/185 (70.27%), Postives = 143/185 (77.30%), Query Frame = 0


Query: 52  SDLNLTFKSRGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIV 111
           S L++ F+ RGRSLLQP +AS           RWLLVPVGDG+WKHIGSKVEMPDAFEIV
Sbjct: 28  SSLSIQFRPRGRSLLQPLQASS----------RWLLVPVGDGEWKHIGSKVEMPDAFEIV 87

Query: 112 SNEVTVGRLPEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDL 171
           SNEVTVGRLP+KADI IPVA                   TVSA HARIK QEDRLLVIDL
Sbjct: 88  SNEVTVGRLPDKADIVIPVA-------------------TVSAQHARIKNQEDRLLVIDL 147

Query: 172 DSTNGTFIDDKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQ-ESEDSIG 231
           DSTNGTFI+DKRL PGVVAAVSSGN I+FGDIHLAMFQV+KLKT +AASKIQ E+E+SI 
Sbjct: 148 DSTNGTFINDKRLNPGVVAAVSSGNSITFGDIHLAMFQVAKLKTVEAASKIQEETEESIS 183

Query: 232 NSETS 236
           +SETS
Sbjct: 208 DSETS 183

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BLAST of Carg13968 vs. TAIR10
Match: AT2G21530.1 (SMAD/FHA domain-containing protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 85/171 (49.71%), Postives = 102/171 (59.65%), Query Frame = 0


Query: 65  LLQPPRASQSEFE-PQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRLPEK 124
           +++  RAS  E + P S   RWLL PVGDGD +HIG KV MP  FEI S +VT+GRLPEK
Sbjct: 66  VVRTTRASLDENQSPTSGGERWLLKPVGDGDTRHIGYKVAMPAPFEISSGQVTIGRLPEK 125

Query: 125 ADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFIDDKR 184
           AD+ IPVA                   TVS VHA I   E  LLV D++STNGTFI+DKR
Sbjct: 126 ADVVIPVA-------------------TVSGVHATINTNEKNLLVTDMNSTNGTFIEDKR 185

Query: 185 LKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSET 235
           L PGV A    G  I+FGD +LA+F+V KL         Q+SE+SI    T
Sbjct: 186 LIPGVAAPAFPGTRITFGDTNLAIFRVFKL---------QDSEESIEKPTT 208

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BLAST of Carg13968 vs. TrEMBL
Match: tr|A0A1S4DXK3|A0A1S4DXK3_CUCME (uncharacterized protein LOC103491680 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491680 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.0e-58
Identity = 137/206 (66.50%), Postives = 150/206 (72.82%), Query Frame = 0


Query: 31  TPYPHTRTKSTASVLPPLLLRSDLNLTFKSRGRSLLQPPRASQSEFEPQSSSVRWLLVPV 90
           TP  H  T S  S  P LL R  L++ F+ RGRSLL+  +AS           RWLLVPV
Sbjct: 19  TPSLHRSTLSGLS--PSLLPRLSLSIQFRPRGRSLLRHIQASS----------RWLLVPV 78

Query: 91  GDGDWKHIGSKVEMPDAFEIVSNEVTVGRLPEKADIAIPVATELVDCIVPLTSLRFSEMK 150
           GDG+WKHIGSKVEMPDAFEIVSNEVTVGRLP+KADI IPVA                   
Sbjct: 79  GDGEWKHIGSKVEMPDAFEIVSNEVTVGRLPDKADIVIPVA------------------- 138

Query: 151 TVSAVHARIKKQEDRLLVIDLDSTNGTFIDDKRLKPGVVAAVSSGNCISFGDIHLAMFQV 210
           TVS  HARIK QED+LLVIDLDSTNGTFIDDKRL PGVVAAVSSGNCI+FGDIHLAMFQV
Sbjct: 139 TVSGQHARIKNQEDKLLVIDLDSTNGTFIDDKRLNPGVVAAVSSGNCITFGDIHLAMFQV 193

Query: 211 SKLKTDKAASKIQ-ESEDSIGNSETS 236
           SKLKT +AASKIQ E+E+ I +SETS
Sbjct: 199 SKLKTVEAASKIQEETEEPISDSETS 193

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BLAST of Carg13968 vs. TrEMBL
Match: tr|A0A0A0KX03|A0A0A0KX03_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G269160 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.6e-57
Identity = 130/185 (70.27%), Postives = 143/185 (77.30%), Query Frame = 0


Query: 52  SDLNLTFKSRGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIV 111
           S L++ F+ RGRSLLQP +AS           RWLLVPVGDG+WKHIGSKVEMPDAFEIV
Sbjct: 28  SSLSIQFRPRGRSLLQPLQASS----------RWLLVPVGDGEWKHIGSKVEMPDAFEIV 87

Query: 112 SNEVTVGRLPEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDL 171
           SNEVTVGRLP+KADI IPVA                   TVSA HARIK QEDRLLVIDL
Sbjct: 88  SNEVTVGRLPDKADIVIPVA-------------------TVSAQHARIKNQEDRLLVIDL 147

Query: 172 DSTNGTFIDDKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQ-ESEDSIG 231
           DSTNGTFI+DKRL PGVVAAVSSGN I+FGDIHLAMFQV+KLKT +AASKIQ E+E+SI 
Sbjct: 148 DSTNGTFINDKRLNPGVVAAVSSGNSITFGDIHLAMFQVAKLKTVEAASKIQEETEESIS 183

Query: 232 NSETS 236
           +SETS
Sbjct: 208 DSETS 183

[Close]

BLAST of Carg13968 vs. TrEMBL
Match: tr|A0A1S4DXL0|A0A1S4DXL0_CUCME (uncharacterized protein LOC103491680 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491680 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.3e-45
Identity = 110/171 (64.33%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 31  TPYPHTRTKSTASVLPPLLLRSDLNLTFKSRGRSLLQPPRASQSEFEPQSSSVRWLLVPV 90
           TP  H  T S  S  P LL R  L++ F+ RGRSLL+  +AS           RWLLVPV
Sbjct: 19  TPSLHRSTLSGLS--PSLLPRLSLSIQFRPRGRSLLRHIQASS----------RWLLVPV 78

Query: 91  GDGDWKHIGSKVEMPDAFEIVSNEVTVGRLPEKADIAIPVATELVDCIVPLTSLRFSEMK 150
           GDG+WKHIGSKVEMPDAFEIVSNEVTVGRLP+KADI IPVA                   
Sbjct: 79  GDGEWKHIGSKVEMPDAFEIVSNEVTVGRLPDKADIVIPVA------------------- 138

Query: 151 TVSAVHARIKKQEDRLLVIDLDSTNGTFIDDKRLKPGVVAAVSSGNCISFG 202
           TVS  HARIK QED+LLVIDLDSTNGTFIDDKRL PGVVAAVSSGNCI+FG
Sbjct: 139 TVSGQHARIKNQEDKLLVIDLDSTNGTFIDDKRLNPGVVAAVSSGNCITFG 158

[Close]

BLAST of Carg13968 vs. TrEMBL
Match: tr|A0A2C9VB27|A0A2C9VB27_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G111800 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 5.0e-45
Identity = 111/233 (47.64%), Postives = 144/233 (61.80%), Query Frame = 0


Query: 1   MEFTVHSISRPNLPLPLSXXXXXXXXXXXLTPYPHTRTKSTASVLPPLLLRSDLNL-TFK 60
           M+ T  S+S+  LP   S               P    +++ ++  P +  S L +   K
Sbjct: 1   MDVTARSLSQAKLPAGCSTSVSPTIFHSK----PSILAQNSIALQSPKIPFSQLQVFRIK 60

Query: 61  SRGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGR 120
           +R + +L+P  AS+SE        RWLL PVGDGD +HIG K++MPDAFEI S+EVTVGR
Sbjct: 61  ARKQRILEPVHASESEISSTDVQDRWLLQPVGDGDTRHIGYKMKMPDAFEIASSEVTVGR 120

Query: 121 LPEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFI 180
           LPEKAD+ IPVA                   TVS +HARI+K+E  LLV DLDSTNGT+I
Sbjct: 121 LPEKADVVIPVA-------------------TVSGIHARIQKKEGNLLVTDLDSTNGTYI 180

Query: 181 DDKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNS 233
           DDKRLKPGV A V SG+ ++FGDIHLAMF+VSKL+  ++ASK +ESE+    S
Sbjct: 181 DDKRLKPGVAANVPSGSLLTFGDIHLAMFRVSKLENVESASKPEESEEKAETS 210

[Close]

BLAST of Carg13968 vs. TrEMBL
Match: tr|A0A2P4L118|A0A2P4L118_QUESU (Zeaxanthin epoxidase, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_40179 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 8.0e-43
Identity = 113/241 (46.89%), Postives = 139/241 (57.68%), Query Frame = 0


Query: 1   MEFTVHSISRPNLPLPLSXXXXXXXXXXXLTPYPHTRTKSTASVLPPLLLRSDLNLTFKS 60
           ME T  S+S   LP P              +   +    S         L     +  K+
Sbjct: 1   MEVTAQSLSYAKLPKPSINFSSPPSLPFFHSKASYAGFNSVTFQSSKSFLTQLKGVGIKT 60

Query: 61  RGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL 120
           R    +    AS++E  P   + RWLL PVGDGD +HIGSKV+MPDAFEIVSNEVTVGR+
Sbjct: 61  RQLKNVGAINASEAESPPTDVAERWLLEPVGDGDSRHIGSKVKMPDAFEIVSNEVTVGRV 120

Query: 121 PEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFID 180
           PEKA+I IP+A                   TVS +HARI+K++  LLV DLDSTNGTFID
Sbjct: 121 PEKANIVIPIA-------------------TVSGLHARIQKKDGNLLVTDLDSTNGTFID 180

Query: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSI------GNSET 236
           DKRL+PGV A V  GN I FGDIHLAMF+ +KL+  +AA+K +ESED +       NSET
Sbjct: 181 DKRLRPGVPATVLPGNYIIFGDIHLAMFRATKLENVEAATKAEESEDKVETDSQTENSET 222

The following BLAST results are available for this feature:

BLAST of Carg13968 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532653.1	4.0e-102	85.96	uncharacterized protein LOC111794752 [Cucurbita pepo subsp. pepo]	[more]
XP_022996302.1	2.6e-101	85.53	uncharacterized protein LOC111491570 [Cucurbita maxima]	[more]
XP_022957686.1	2.2e-100	85.11	uncharacterized protein LOC111459151 [Cucurbita moschata]	[more]
XP_016900711.1	4.6e-58	66.50	PREDICTED: uncharacterized protein LOC103491680 isoform X1 [Cucumis melo]	[more]
XP_004149650.1	3.9e-57	70.27	PREDICTED: uncharacterized protein LOC101219513 isoform X1 [Cucumis sativus] >KG...	[more]

BLAST of Carg13968 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21530.1	1.2e-33	49.71	SMAD/FHA domain-containing protein	[more]

BLAST of Carg13968 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg13968 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DXK3\|A0A1S4DXK3_CUCME	3.0e-58	66.50	uncharacterized protein LOC103491680 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KX03\|A0A0A0KX03_CUCSA	2.6e-57	70.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G269160 PE=4 SV=1	[more]
tr\|A0A1S4DXL0\|A0A1S4DXL0_CUCME	1.3e-45	64.33	uncharacterized protein LOC103491680 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2C9VB27\|A0A2C9VB27_MANES	5.0e-45	47.64	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G111800 PE=4 SV=...	[more]
tr\|A0A2P4L118\|A0A2P4L118_QUESU	8.0e-43	46.89	Zeaxanthin epoxidase, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_40179 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR008984	SMAD_FHA_dom_sf
IPR000253	FHA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13968-RA	Carg13968-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000253	Forkhead-associated (FHA) domain	SMART	SM00240	FHA_2	coord: 114..184 e-value: 4.5E-8 score: 42.8
IPR000253	Forkhead-associated (FHA) domain	PFAM	PF00498	FHA	coord: 115..201 e-value: 5.7E-13 score: 48.9
IPR000253	Forkhead-associated (FHA) domain	PROSITE	PS50006	FHA_DOMAIN	coord: 115..184 score: 13.189
IPR000253	Forkhead-associated (FHA) domain	CDD	cd00060	FHA	coord: 112..208 e-value: 5.78727E-13 score: 61.2482
None	No IPR available	GENE3D	G3DSA:2.60.200.20		coord: 97..230 e-value: 5.0E-18 score: 66.9
None	No IPR available	PANTHER	PTHR23308:SF29	SUBFAMILY NOT NAMED	coord: 72..227
None	No IPR available	PANTHER	PTHR23308	NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1	coord: 72..227
IPR008984	SMAD/FHA domain superfamily	SUPERFAMILY	SSF49879	SMAD/FHA domain	coord: 75..208

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13968	Cla003137	Watermelon (97103) v1	carwmB0505
Carg13968	Csa4G269160	Cucumber (Chinese Long) v2	carcuB0535
Carg13968	MELO3C014714	Melon (DHL92) v3.5.1	carmeB0512
Carg13968	ClCG02G024290	Watermelon (Charleston Gray)	carwcgB0493
Carg13968	CSPI04G12660	Wild cucumber (PI 183967)	carcpiB0542
Carg13968	Cucsa.152850	Cucumber (Gy14) v1	carcgyB0580
Carg13968	CmaCh02G011800	Cucurbita maxima (Rimu)	carcmaB0716
Carg13968	CmoCh02G012140	Cucurbita moschata (Rifu)	carcmoB0694
Carg13968	Lsi10G009310	Bottle gourd (USVL1VR-Ls)	carlsiB458
Carg13968	Cp4.1LG05g05530	Cucurbita pepo (Zucchini)	carcpeB0718
Carg13968	MELO3C014714.2	Melon (DHL92) v3.6.1	carmedB0518
Carg13968	CsaV3_4G017420	Cucumber (Chinese Long) v3	carcucB0539
Carg13968	Cla97C02G050540	Watermelon (97103) v2	carwmbB0531

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13968	Cucumber (Gy14) v2	carcgybB0511
Carg13968	Wax gourd	carwgoB0618