Carg13968-RA (mRNA) Silver-seed gourd

NameCarg13968-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZeaxanthin epoxidase, chloroplastic
LocationCucurbita_argyrosperma_scaffold_097 : 2692 .. 5356 (-)
Sequence length1043
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTCACAGTCCATTCCATTTCCCGCCCCAACCTCCCTCTCCCTCTTTCCTTCTCCATTCATTCATCTTCCCCTTCCAATTCCCTTACTCCATACCCACACACAAGAACCAAATCAACCGCCTCCGTCCTTCCGCCATTGTTGCTGCGTTCTGATCTCAATCTCACCTTCAAATCAAGGGGACGATCACTTCTTCAACCTCCACGAGCTTCTCAGTCTGAATTCGAGCCTCAATCTTCTTCTGTCCGCTGGCTTCTCGTTCCCGTTGGTTAGCGCATTCTGAATCTCTACCATTGTTCTGTTCGATTGTATCTTATATTTGATTTGAAGATTTCGTGATTTCTTCACAGGCGATGGCGATTGGAAACATATCGGTTCCAAAGTTGAAATGCCTGATGCGTTTGAAATCGTCTCGGTCAGTACTTTTCATTGAGGCTCTTCAGCCCTTGCGAGTCTCTATTGTGTGATATTCGAGCTCGTTTTAACTCTTTTTGGCTGTCGAAACTCATCTTAATGCAGAATGAGGTCACTGTTGGGCGCCTTCCTGAGAAAGCTGACATTGCAATTCCAGTTGCTACAGGTGAGTTTACTCCAAACATCTGTTGCTACTTGTTTGATTTGATGCTTTCAATTCAATTGCTACAGATCTGACAGTTTCAAGTTTTCCTTTGAGTTTTTGGAATGCAGAACTTGTGGATTGTATTGTGCCACTAACTTCACTGCGATTTTCTGAAATGAAAACAGTTTCTGCTGTACATGCTCGCATCAAAAAGCAAGAAGACAGGCTTTTAGTCATAGATCTAGACAGCACAAATGGAACTTTTATTGATGATAAGAGACTCAAGCCTGGAGTTGTTGCTGCTGTATCATCTGGGAATTGCATTTCTTTTGGTAACTTGCCCCCTCAAACTCAATCCAAATTTAATTGTTAGGCTGGTTGGATCACCTCACACTTTCTTATAACAGATTTCATATTTCTCAAGTAAACATTTAAGTTCTTAGCTTGAAGCGTGAAAACATCACTAGAATATATATATATATATATATATATGTCTAAAACAGAGATATCTATAGATTGAAGTAGTGTTTATTAGTTTATATGGAAAAACCAAATGGTCATGAGGCTTAAAATTTTCTTTGAAGGTGAAGGATCTCATTTGCTGTTTTTCGGTTTCGGTTTGGTGAATGCATTTGGTTATGATTATTAGACCATTCAAATCATTGTAGGGTATCTGAGATAGTTAGTCGTCTAAGCTCACCGCTAGTAGATATTTGTCCATTTTGACTCGTTACGTATCGTTGTCAGGCTTACAGTTTTAAATGCGTTTACTAAGGAGATGTTTCCACACTCTTATAAGAAATGTTTCATATCCCTCTCCAACCAACGTGCGATCTCTCATAATTGGACTCGAAATTCATTATAATCGCTACTCAAATCCTAGCACTTGACTCATCCTCTTTGTAAGGCTAAACAAGAGAACCTCTTAGAAAATACTGTGACTTGTGTCTATACATTATTATTGGCTTGAATTCATGAATTGGGTGGCTATACATTGAGTTTATTCTGTATTTTGTTTTGTGGTACAACTCGACTTGCATAGTGTAAATAACTTCAAAATTTTACATGCAGTCAGCTTTGTTGGAGGATGAAAATTTCACGTTGGCTAATTTAGGGAATGATGATGGGTTTATAAGTGAGGAATACTAACTCCATTGGTATGAGGCCTTTTCGGAGAAACCCAAAGCAAAGCCATGAGAGTTTACACTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACATGGTATTAGAGTCATCCCCTGAACTTAGTCGTGCCAATAGATTGGTAAATCCTCAAATGTTGAAGAAAGGACTCCAAAAGAAAAAGAGTTGAGCCTCCTCAAAGGCATAGTAAAAAATGACTAAGACTCCAAAAGAAAAAGGAGTCGAGCCTCGATTAAAGGGAGGCGTACTTTGTTCGATGGGAGGCGTGGGATGATGAAAGTCCCACATTAGCTAATTTAAGAAATGATAATGAGTTTATAAGTGAGGAATACTAACTCCGTTGGTACGAGGCCTTTTGGGGAAGCCCAAAATAAAGTCACGAGAGCTTATGCTCAAAGTGGACAATATCATACTATTACAGAGAGTCGTGTTCATCTAACAAGCTTAATTGATTAACTTTGGGATATCTCTTTTGTTGACAGGGGACATCCATCTAGCCATGTTTCAGGTGTCAAAGTTAAAGACTGATAAAGCCGCTAGCAAAATCCAAGAATCTGAGGACTCAATCGGTAACTCTGAAACAAGTTAAAAAAATGGTACATTTACATGTCTTCTAAGAGCAAATATGTGCAAAATTCTGCACATTCTGTATCGTAACAGTAATCTTTGCATGAAATTTTTCATATGAGTTGAAGAATATTGAAGAGCTAACGAGTCATCTGATCTCACTATTTGTTTTTTTAAGGCCATTTTAGAATACATCCATTTGATCCAAGCTATACTATCTAACCCTTTAAAAGAGTCCGATATGATAGAGCCTCCGCTTAAGATTCAAGTCAGGATTTAGAGTTTGGCCCCTACATCTTTCAAAGAGTTAAAAGCTATTCCTACAAATCAATATTCGGATTCTTTTAGTATATTTTA

mRNA sequence

ATGGAGTTCACAGTCCATTCCATTTCCCGCCCCAACCTCCCTCTCCCTCTTTCCTTCTCCATTCATTCATCTTCCCCTTCCAATTCCCTTACTCCATACCCACACACAAGAACCAAATCAACCGCCTCCGTCCTTCCGCCATTGTTGCTGCGTTCTGATCTCAATCTCACCTTCAAATCAAGGGGACGATCACTTCTTCAACCTCCACGAGCTTCTCAGTCTGAATTCGAGCCTCAATCTTCTTCTGTCCGCTGGCTTCTCGTTCCCGTTGGCGATGGCGATTGGAAACATATCGGTTCCAAAGTTGAAATGCCTGATGCGTTTGAAATCGTCTCGAATGAGGTCACTGTTGGGCGCCTTCCTGAGAAAGCTGACATTGCAATTCCAGTTGCTACAGAACTTGTGGATTGTATTGTGCCACTAACTTCACTGCGATTTTCTGAAATGAAAACAGTTTCTGCTGTACATGCTCGCATCAAAAAGCAAGAAGACAGGCTTTTAGTCATAGATCTAGACAGCACAAATGGAACTTTTATTGATGATAAGAGACTCAAGCCTGGAGTTGTTGCTGCTGTATCATCTGGGAATTGCATTTCTTTTGGGGACATCCATCTAGCCATGTTTCAGGTGTCAAAGTTAAAGACTGATAAAGCCGCTAGCAAAATCCAAGAATCTGAGGACTCAATCGGTAACTCTGAAACAAGTTAAAAAAATGGTACATTTACATGTCTTCTAAGAGCAAATATGTGCAAAATTCTGCACATTCTGTATCGTAACAGTAATCTTTGCATGAAATTTTTCATATGAGTTGAAGAATATTGAAGAGCTAACGAGTCATCTGATCTCACTATTTGTTTTTTTAAGGCCATTTTAGAATACATCCATTTGATCCAAGCTATACTATCTAACCCTTTAAAAGAGTCCGATATGATAGAGCCTCCGCTTAAGATTCAAGTCAGGATTTAGAGTTTGGCCCCTACATCTTTCAAAGAGTTAAAAGCTATTCCTACAAATCAATATTCGGATTCTTTTAGTATATTTTA

Coding sequence (CDS)

ATGGAGTTCACAGTCCATTCCATTTCCCGCCCCAACCTCCCTCTCCCTCTTTCCTTCTCCATTCATTCATCTTCCCCTTCCAATTCCCTTACTCCATACCCACACACAAGAACCAAATCAACCGCCTCCGTCCTTCCGCCATTGTTGCTGCGTTCTGATCTCAATCTCACCTTCAAATCAAGGGGACGATCACTTCTTCAACCTCCACGAGCTTCTCAGTCTGAATTCGAGCCTCAATCTTCTTCTGTCCGCTGGCTTCTCGTTCCCGTTGGCGATGGCGATTGGAAACATATCGGTTCCAAAGTTGAAATGCCTGATGCGTTTGAAATCGTCTCGAATGAGGTCACTGTTGGGCGCCTTCCTGAGAAAGCTGACATTGCAATTCCAGTTGCTACAGAACTTGTGGATTGTATTGTGCCACTAACTTCACTGCGATTTTCTGAAATGAAAACAGTTTCTGCTGTACATGCTCGCATCAAAAAGCAAGAAGACAGGCTTTTAGTCATAGATCTAGACAGCACAAATGGAACTTTTATTGATGATAAGAGACTCAAGCCTGGAGTTGTTGCTGCTGTATCATCTGGGAATTGCATTTCTTTTGGGGACATCCATCTAGCCATGTTTCAGGTGTCAAAGTTAAAGACTGATAAAGCCGCTAGCAAAATCCAAGAATCTGAGGACTCAATCGGTAACTCTGAAACAAGTTAA

Protein sequence

MEFTVHSISRPNLPLPLSFSIHSSSPSNSLTPYPHTRTKSTASVLPPLLLRSDLNLTFKSRGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRLPEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFIDDKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS
BLAST of Carg13968-RA vs. NCBI nr
Match: XP_023532653.1 (uncharacterized protein LOC111794752 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.6 bits (976), Expect = 4.0e-102
Identity = 202/235 (85.96%), Postives = 204/235 (86.81%), Query Frame = 0

Query: 1   MEFTVHSISRPNLPLPLSXXXXXXXXXXXLTPYPHTRTKSTASVLPPLLLRSDLNLTFKS 60
           MEFTVHSISRPNLPLPLS           LTPYPHTRTK+TAS+LPPLLLRSDLNLTFKS
Sbjct: 1   MEFTVHSISRPNLPLPLSFSIYSSSPSNSLTPYPHTRTKATASILPPLLLRSDLNLTFKS 60

Query: 61  RGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL 120
           RGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL
Sbjct: 61  RGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL 120

Query: 121 PEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFID 180
           PEKADIAIPVA                   TVSAVHARIKKQEDRLLVIDLDSTNGTFID
Sbjct: 121 PEKADIAIPVA-------------------TVSAVHARIKKQEDRLLVIDLDSTNGTFID 180

Query: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS 236
           DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDS GNSETS
Sbjct: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSNGNSETS 216

BLAST of Carg13968-RA vs. NCBI nr
Match: XP_022996302.1 (uncharacterized protein LOC111491570 [Cucurbita maxima])

HSP 1 Score: 377.9 bits (969), Expect = 2.6e-101
Identity = 201/235 (85.53%), Postives = 203/235 (86.38%), Query Frame = 0

Query: 1   MEFTVHSISRPNLPLPLSXXXXXXXXXXXLTPYPHTRTKSTASVLPPLLLRSDLNLTFKS 60
           MEFTVHSISRPNLPLPLS           LTPYPHTRTKSTAS+LPPLLLRSDLNLTFKS
Sbjct: 1   MEFTVHSISRPNLPLPLSFSLHSSSPSNSLTPYPHTRTKSTASILPPLLLRSDLNLTFKS 60

Query: 61  RGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL 120
           RGRSLLQP RA QSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNE+TVGRL
Sbjct: 61  RGRSLLQPLRAFQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEITVGRL 120

Query: 121 PEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFID 180
           PEKADIAIPVA                   TVSAVHARIKKQEDRLLVIDLDSTNGTFID
Sbjct: 121 PEKADIAIPVA-------------------TVSAVHARIKKQEDRLLVIDLDSTNGTFID 180

Query: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS 236
           DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS
Sbjct: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS 216

BLAST of Carg13968-RA vs. NCBI nr
Match: XP_022957686.1 (uncharacterized protein LOC111459151 [Cucurbita moschata])

HSP 1 Score: 374.8 bits (961), Expect = 2.2e-100
Identity = 200/235 (85.11%), Postives = 203/235 (86.38%), Query Frame = 0

Query: 1   MEFTVHSISRPNLPLPLSXXXXXXXXXXXLTPYPHTRTKSTASVLPPLLLRSDLNLTFKS 60
           MEFTVHSISRPNLPLPLS           LTPYPHTRTK+TAS+LPPLLLRSDLNLTFKS
Sbjct: 1   MEFTVHSISRPNLPLPLSFSTYSSSPSNSLTPYPHTRTKATASILPPLLLRSDLNLTFKS 60

Query: 61  RGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL 120
           R RSLLQP RASQSEFEP+SSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL
Sbjct: 61  RRRSLLQPLRASQSEFEPRSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL 120

Query: 121 PEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFID 180
           PEKADIAIPVA                   TVSAVHARIKKQEDRLLVIDLDSTNGTFID
Sbjct: 121 PEKADIAIPVA-------------------TVSAVHARIKKQEDRLLVIDLDSTNGTFID 180

Query: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS 236
           DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS
Sbjct: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSETS 216

BLAST of Carg13968-RA vs. NCBI nr
Match: XP_016900711.1 (PREDICTED: uncharacterized protein LOC103491680 isoform X1 [Cucumis melo])

HSP 1 Score: 234.2 bits (596), Expect = 4.6e-58
Identity = 137/206 (66.50%), Postives = 150/206 (72.82%), Query Frame = 0

Query: 31  TPYPHTRTKSTASVLPPLLLRSDLNLTFKSRGRSLLQPPRASQSEFEPQSSSVRWLLVPV 90
           TP  H  T S  S  P LL R  L++ F+ RGRSLL+  +AS           RWLLVPV
Sbjct: 19  TPSLHRSTLSGLS--PSLLPRLSLSIQFRPRGRSLLRHIQASS----------RWLLVPV 78

Query: 91  GDGDWKHIGSKVEMPDAFEIVSNEVTVGRLPEKADIAIPVATELVDCIVPLTSLRFSEMK 150
           GDG+WKHIGSKVEMPDAFEIVSNEVTVGRLP+KADI IPVA                   
Sbjct: 79  GDGEWKHIGSKVEMPDAFEIVSNEVTVGRLPDKADIVIPVA------------------- 138

Query: 151 TVSAVHARIKKQEDRLLVIDLDSTNGTFIDDKRLKPGVVAAVSSGNCISFGDIHLAMFQV 210
           TVS  HARIK QED+LLVIDLDSTNGTFIDDKRL PGVVAAVSSGNCI+FGDIHLAMFQV
Sbjct: 139 TVSGQHARIKNQEDKLLVIDLDSTNGTFIDDKRLNPGVVAAVSSGNCITFGDIHLAMFQV 193

Query: 211 SKLKTDKAASKIQ-ESEDSIGNSETS 236
           SKLKT +AASKIQ E+E+ I +SETS
Sbjct: 199 SKLKTVEAASKIQEETEEPISDSETS 193

BLAST of Carg13968-RA vs. NCBI nr
Match: XP_004149650.1 (PREDICTED: uncharacterized protein LOC101219513 isoform X1 [Cucumis sativus] >KGN54033.1 hypothetical protein Csa_4G269160 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 3.9e-57
Identity = 130/185 (70.27%), Postives = 143/185 (77.30%), Query Frame = 0

Query: 52  SDLNLTFKSRGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIV 111
           S L++ F+ RGRSLLQP +AS           RWLLVPVGDG+WKHIGSKVEMPDAFEIV
Sbjct: 28  SSLSIQFRPRGRSLLQPLQASS----------RWLLVPVGDGEWKHIGSKVEMPDAFEIV 87

Query: 112 SNEVTVGRLPEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDL 171
           SNEVTVGRLP+KADI IPVA                   TVSA HARIK QEDRLLVIDL
Sbjct: 88  SNEVTVGRLPDKADIVIPVA-------------------TVSAQHARIKNQEDRLLVIDL 147

Query: 172 DSTNGTFIDDKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQ-ESEDSIG 231
           DSTNGTFI+DKRL PGVVAAVSSGN I+FGDIHLAMFQV+KLKT +AASKIQ E+E+SI 
Sbjct: 148 DSTNGTFINDKRLNPGVVAAVSSGNSITFGDIHLAMFQVAKLKTVEAASKIQEETEESIS 183

Query: 232 NSETS 236
           +SETS
Sbjct: 208 DSETS 183

BLAST of Carg13968-RA vs. TAIR10
Match: AT2G21530.1 (SMAD/FHA domain-containing protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 85/171 (49.71%), Postives = 102/171 (59.65%), Query Frame = 0

Query: 65  LLQPPRASQSEFE-PQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRLPEK 124
           +++  RAS  E + P S   RWLL PVGDGD +HIG KV MP  FEI S +VT+GRLPEK
Sbjct: 66  VVRTTRASLDENQSPTSGGERWLLKPVGDGDTRHIGYKVAMPAPFEISSGQVTIGRLPEK 125

Query: 125 ADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFIDDKR 184
           AD+ IPVA                   TVS VHA I   E  LLV D++STNGTFI+DKR
Sbjct: 126 ADVVIPVA-------------------TVSGVHATINTNEKNLLVTDMNSTNGTFIEDKR 185

Query: 185 LKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNSET 235
           L PGV A    G  I+FGD +LA+F+V KL         Q+SE+SI    T
Sbjct: 186 LIPGVAAPAFPGTRITFGDTNLAIFRVFKL---------QDSEESIEKPTT 208

BLAST of Carg13968-RA vs. TrEMBL
Match: tr|A0A1S4DXK3|A0A1S4DXK3_CUCME (uncharacterized protein LOC103491680 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491680 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.0e-58
Identity = 137/206 (66.50%), Postives = 150/206 (72.82%), Query Frame = 0

Query: 31  TPYPHTRTKSTASVLPPLLLRSDLNLTFKSRGRSLLQPPRASQSEFEPQSSSVRWLLVPV 90
           TP  H  T S  S  P LL R  L++ F+ RGRSLL+  +AS           RWLLVPV
Sbjct: 19  TPSLHRSTLSGLS--PSLLPRLSLSIQFRPRGRSLLRHIQASS----------RWLLVPV 78

Query: 91  GDGDWKHIGSKVEMPDAFEIVSNEVTVGRLPEKADIAIPVATELVDCIVPLTSLRFSEMK 150
           GDG+WKHIGSKVEMPDAFEIVSNEVTVGRLP+KADI IPVA                   
Sbjct: 79  GDGEWKHIGSKVEMPDAFEIVSNEVTVGRLPDKADIVIPVA------------------- 138

Query: 151 TVSAVHARIKKQEDRLLVIDLDSTNGTFIDDKRLKPGVVAAVSSGNCISFGDIHLAMFQV 210
           TVS  HARIK QED+LLVIDLDSTNGTFIDDKRL PGVVAAVSSGNCI+FGDIHLAMFQV
Sbjct: 139 TVSGQHARIKNQEDKLLVIDLDSTNGTFIDDKRLNPGVVAAVSSGNCITFGDIHLAMFQV 193

Query: 211 SKLKTDKAASKIQ-ESEDSIGNSETS 236
           SKLKT +AASKIQ E+E+ I +SETS
Sbjct: 199 SKLKTVEAASKIQEETEEPISDSETS 193

BLAST of Carg13968-RA vs. TrEMBL
Match: tr|A0A0A0KX03|A0A0A0KX03_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G269160 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.6e-57
Identity = 130/185 (70.27%), Postives = 143/185 (77.30%), Query Frame = 0

Query: 52  SDLNLTFKSRGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIV 111
           S L++ F+ RGRSLLQP +AS           RWLLVPVGDG+WKHIGSKVEMPDAFEIV
Sbjct: 28  SSLSIQFRPRGRSLLQPLQASS----------RWLLVPVGDGEWKHIGSKVEMPDAFEIV 87

Query: 112 SNEVTVGRLPEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDL 171
           SNEVTVGRLP+KADI IPVA                   TVSA HARIK QEDRLLVIDL
Sbjct: 88  SNEVTVGRLPDKADIVIPVA-------------------TVSAQHARIKNQEDRLLVIDL 147

Query: 172 DSTNGTFIDDKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQ-ESEDSIG 231
           DSTNGTFI+DKRL PGVVAAVSSGN I+FGDIHLAMFQV+KLKT +AASKIQ E+E+SI 
Sbjct: 148 DSTNGTFINDKRLNPGVVAAVSSGNSITFGDIHLAMFQVAKLKTVEAASKIQEETEESIS 183

Query: 232 NSETS 236
           +SETS
Sbjct: 208 DSETS 183

BLAST of Carg13968-RA vs. TrEMBL
Match: tr|A0A1S4DXL0|A0A1S4DXL0_CUCME (uncharacterized protein LOC103491680 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491680 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.3e-45
Identity = 110/171 (64.33%), Postives = 119/171 (69.59%), Query Frame = 0

Query: 31  TPYPHTRTKSTASVLPPLLLRSDLNLTFKSRGRSLLQPPRASQSEFEPQSSSVRWLLVPV 90
           TP  H  T S  S  P LL R  L++ F+ RGRSLL+  +AS           RWLLVPV
Sbjct: 19  TPSLHRSTLSGLS--PSLLPRLSLSIQFRPRGRSLLRHIQASS----------RWLLVPV 78

Query: 91  GDGDWKHIGSKVEMPDAFEIVSNEVTVGRLPEKADIAIPVATELVDCIVPLTSLRFSEMK 150
           GDG+WKHIGSKVEMPDAFEIVSNEVTVGRLP+KADI IPVA                   
Sbjct: 79  GDGEWKHIGSKVEMPDAFEIVSNEVTVGRLPDKADIVIPVA------------------- 138

Query: 151 TVSAVHARIKKQEDRLLVIDLDSTNGTFIDDKRLKPGVVAAVSSGNCISFG 202
           TVS  HARIK QED+LLVIDLDSTNGTFIDDKRL PGVVAAVSSGNCI+FG
Sbjct: 139 TVSGQHARIKNQEDKLLVIDLDSTNGTFIDDKRLNPGVVAAVSSGNCITFG 158

BLAST of Carg13968-RA vs. TrEMBL
Match: tr|A0A2C9VB27|A0A2C9VB27_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G111800 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 5.0e-45
Identity = 111/233 (47.64%), Postives = 144/233 (61.80%), Query Frame = 0

Query: 1   MEFTVHSISRPNLPLPLSXXXXXXXXXXXLTPYPHTRTKSTASVLPPLLLRSDLNL-TFK 60
           M+ T  S+S+  LP   S               P    +++ ++  P +  S L +   K
Sbjct: 1   MDVTARSLSQAKLPAGCSTSVSPTIFHSK----PSILAQNSIALQSPKIPFSQLQVFRIK 60

Query: 61  SRGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGR 120
           +R + +L+P  AS+SE        RWLL PVGDGD +HIG K++MPDAFEI S+EVTVGR
Sbjct: 61  ARKQRILEPVHASESEISSTDVQDRWLLQPVGDGDTRHIGYKMKMPDAFEIASSEVTVGR 120

Query: 121 LPEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFI 180
           LPEKAD+ IPVA                   TVS +HARI+K+E  LLV DLDSTNGT+I
Sbjct: 121 LPEKADVVIPVA-------------------TVSGIHARIQKKEGNLLVTDLDSTNGTYI 180

Query: 181 DDKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSIGNS 233
           DDKRLKPGV A V SG+ ++FGDIHLAMF+VSKL+  ++ASK +ESE+    S
Sbjct: 181 DDKRLKPGVAANVPSGSLLTFGDIHLAMFRVSKLENVESASKPEESEEKAETS 210

BLAST of Carg13968-RA vs. TrEMBL
Match: tr|A0A2P4L118|A0A2P4L118_QUESU (Zeaxanthin epoxidase, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_40179 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 8.0e-43
Identity = 113/241 (46.89%), Postives = 139/241 (57.68%), Query Frame = 0

Query: 1   MEFTVHSISRPNLPLPLSXXXXXXXXXXXLTPYPHTRTKSTASVLPPLLLRSDLNLTFKS 60
           ME T  S+S   LP P              +   +    S         L     +  K+
Sbjct: 1   MEVTAQSLSYAKLPKPSINFSSPPSLPFFHSKASYAGFNSVTFQSSKSFLTQLKGVGIKT 60

Query: 61  RGRSLLQPPRASQSEFEPQSSSVRWLLVPVGDGDWKHIGSKVEMPDAFEIVSNEVTVGRL 120
           R    +    AS++E  P   + RWLL PVGDGD +HIGSKV+MPDAFEIVSNEVTVGR+
Sbjct: 61  RQLKNVGAINASEAESPPTDVAERWLLEPVGDGDSRHIGSKVKMPDAFEIVSNEVTVGRV 120

Query: 121 PEKADIAIPVATELVDCIVPLTSLRFSEMKTVSAVHARIKKQEDRLLVIDLDSTNGTFID 180
           PEKA+I IP+A                   TVS +HARI+K++  LLV DLDSTNGTFID
Sbjct: 121 PEKANIVIPIA-------------------TVSGLHARIQKKDGNLLVTDLDSTNGTFID 180

Query: 181 DKRLKPGVVAAVSSGNCISFGDIHLAMFQVSKLKTDKAASKIQESEDSI------GNSET 236
           DKRL+PGV A V  GN I FGDIHLAMF+ +KL+  +AA+K +ESED +       NSET
Sbjct: 181 DKRLRPGVPATVLPGNYIIFGDIHLAMFRATKLENVEAATKAEESEDKVETDSQTENSET 222

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023532653.14.0e-10285.96uncharacterized protein LOC111794752 [Cucurbita pepo subsp. pepo][more]
XP_022996302.12.6e-10185.53uncharacterized protein LOC111491570 [Cucurbita maxima][more]
XP_022957686.12.2e-10085.11uncharacterized protein LOC111459151 [Cucurbita moschata][more]
XP_016900711.14.6e-5866.50PREDICTED: uncharacterized protein LOC103491680 isoform X1 [Cucumis melo][more]
XP_004149650.13.9e-5770.27PREDICTED: uncharacterized protein LOC101219513 isoform X1 [Cucumis sativus] >KG... [more]
Match NameE-valueIdentityDescription
AT2G21530.11.2e-3349.71SMAD/FHA domain-containing protein [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S4DXK3|A0A1S4DXK3_CUCME3.0e-5866.50uncharacterized protein LOC103491680 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0KX03|A0A0A0KX03_CUCSA2.6e-5770.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G269160 PE=4 SV=1[more]
tr|A0A1S4DXL0|A0A1S4DXL0_CUCME1.3e-4564.33uncharacterized protein LOC103491680 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2C9VB27|A0A2C9VB27_MANES5.0e-4547.64Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G111800 PE=4 SV=... [more]
tr|A0A2P4L118|A0A2P4L118_QUESU8.0e-4346.89Zeaxanthin epoxidase, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_40179 PE=... [more]
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR008984SMAD_FHA_dom_sf
IPR000253FHA_dom
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg13968Carg13968gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg13968-RACarg13968-RA-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg13968-RA.three_prime_UTR.1Carg13968-RA.three_prime_UTR.1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg13968-RA.CDS.5Carg13968-RA.CDS.5CDS
Carg13968-RA.CDS.4Carg13968-RA.CDS.4CDS
Carg13968-RA.CDS.3Carg13968-RA.CDS.3CDS
Carg13968-RA.CDS.2Carg13968-RA.CDS.2CDS
Carg13968-RA.CDS.1Carg13968-RA.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg13968-RA.exon.5Carg13968-RA.exon.5exon
Carg13968-RA.exon.4Carg13968-RA.exon.4exon
Carg13968-RA.exon.3Carg13968-RA.exon.3exon
Carg13968-RA.exon.2Carg13968-RA.exon.2exon
Carg13968-RA.exon.1Carg13968-RA.exon.1exon


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000253Forkhead-associated (FHA) domainSMARTSM00240FHA_2coord: 114..184
e-value: 4.5E-8
score: 42.8
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 115..201
e-value: 5.7E-13
score: 48.9
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 115..184
score: 13.189
IPR000253Forkhead-associated (FHA) domainCDDcd00060FHAcoord: 112..208
e-value: 5.78727E-13
score: 61.2482
NoneNo IPR availableGENE3DG3DSA:2.60.200.20coord: 97..230
e-value: 5.0E-18
score: 66.9
NoneNo IPR availablePANTHERPTHR23308:SF29SUBFAMILY NOT NAMEDcoord: 72..227
NoneNo IPR availablePANTHERPTHR23308NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1coord: 72..227
IPR008984SMAD/FHA domain superfamilySUPERFAMILYSSF49879SMAD/FHA domaincoord: 75..208