Carg13675 (gene) Silver-seed gourd

Overview
NameCarg13675
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionHomeobox protein knotted-1, putative
LocationCucurbita_argyrosperma_scaffold_058 : 55921 .. 58625 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGTCCAAGTGGGAGTTCTTCAGGAGGAGGTATGATGAATTTTGTTGATCAAAATAGTCATAATGGGTTTGGTTCCATGATGATGATGATGCCTTTGATGTCCACCTCTCATCAACAACAACACCACCACCACCAGGGAGATGCATGTAGCTCGTTTCTTCCTCCTCCTCCTCCGCCGCCGCCGCCTAATTACACCAACAATAACACTTCTAATTCAATTTCTTACTTCTTGGATGAAACCAACAATAACATCAACGAGGGTAGTAATGGTAATTCTTCATGTGAATTGAAGGCCAAAATCATGGGTCATCCCCACTACCACCGCTTGCTTGTTGCCTATGTCAATTGCCGGAAGGTAATAATAATAGTAAATGGTATTCTTTTTGGGACCCGGGAGCGTAGGCTGAGATCTGAAGCTTTTTGGCAGGTGGGGGCGCCGCCGGAAGTGGTGGCGAGGCTGGAACAAGCGTGTGCATCTGCAGCCACAATGAGTGGTACGTCTTGTATTGGACAAGATCCGGGGCTTGATCAGTTCATGGAGGCTTACTGTGAAATGCTCACCAAATATGAACAAGAACTTTCTAAACCCTTTAGGGATGCCATGCTTTTTCTTCAACGAATTGAGTGCCAATTCAAAGCTCTCTCTATCTCCTCCTCCTCCGATGCTGGTGATTTCTTACTAACAATTACTCCTTTTTTATTTAATCATCTTTTTTTTTTTTTTTTTTTTCCATTTGCCCAATTTTTGTGCTTTATTTTATTATAATATTTTATTATTTTTGTGCCCTTTCTTTGTGGCTAGGGCATCTATGAACCCTTTGATTTGCATAGTCTCTACTTTAAAGATATATATTGTTCTTAGGGTTTATATCTAAACCTCGTCTGTCAAGATGGCTTCATGACACAGTCCAACCCAAATTACCCCTTTTAATCTAGATCCCAACAAGAACATGAAATCGGGTGTCAAGCTAAAAACTGACGGTATAATGTATAAGTCTACTCTTAACAGATATTGTCTTTTTTGGATTTTTCCTTTTGGACTTGGTTTTAAAATGCGTCTGCTAAGGAGGTTTCCACACTTTATAAGGAATGTTTCGTTCTTCTCTGCAACCGATATGGAATCTTACACGAATGATTTTAGAAACTGAATTAGGGAGAAGACATTTGAGTGTAAGGGTGGTTGAGATCTTCCAATATATGCCATTGGGAAGTTGAGATGAAACTTATGAATTCATCGTTTTTAATACCCCATATCTTCAATACATTTCCATATAGTTCATCTTTTTCTTCCTTCAAATGGGATAGTATTGTTTTGATTATCAAGATGAAACATTTAACCTCTCTTGTTTTGTATAGATTTAAATATCTAAGACGTCTGTCTCTTGTGATGATCGTTGAGTATGATTTCAATAATTTGCATGCAGAAATTCTATTTCTACGTACGATGATGATGATAAACTATTTGTCACATTGATGATAAACTATTTGTCACATTGTAGCGGTCTCATCGAACAATTTATCCTATCATTGGTTTTTGAGTTCGCATGGATGAACATGTATCATTAAGTAGCTTTGGAAATACAGGATCTTTTTTTTTTTTTTTTGGTCTTCTACTATTTTTTTGTGTGTTAGATTGTCATTCCCTCTGCAAAATAGTTGTCTTTCTAGTTCTAAAAGAAGAGGAGCCCCCCATCCTCTCTCAAACCCCAAGCCTGGGAGACACTGCACAAATCCTTGAAAAGCTGCCAAAAAGAAAGAAAAATGTCTTATTTCAGCCTAATGTTTCAACTCTTGCCCGCCCCTTGTCTTATTGGGTTAGGAACTACGAACCTCTACAACGGTATGATATTGTTCACTTTGAGCATAAACTCTCGTGGCTTTGATTTTAGTTTATAAAACTAACTTGCGCCCATACCAAATGCGAAAATGTATTTCCGGACTTTATATAACAATCCATTTATGGTCCTCTTAATTTGTGATTGTGGAACTCCCTAACAATCCGCTCACCGATCCATGCAGCCGGAACTATAAATACTTATGAAGTTGTTGTTCTAGAATTAGTATAATGTGTGGATCCATGTGGTGGATCCATGTCTGTAATGTTTTGCCATTGTCCAGCTGACACATAATCTCTTGCCACGCCAAATTAGCGAATTGACAGTGAGGCATTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATGAATAGGCAGTCAATTGACCCCTGGGCGGAAGACCATGAACTGAAAGGTCAACTCCTCCGAAAATACAGCAGATACTTGGGCAGTCTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGCTACCAAAGGAGGCCAGGCAACAGCTCCTGGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCCGTATGTTCTTGTTTTGATAACAACATACACTATAGATTATATATATAATATTATAGATTATATAATGGGAATGGAATGTTTTTTGTGACAGGAATCACAGAAGGTAGCTTTAGCTGAATCAACTGGGTTAGATCAAAAGCAAATCAACAACTGGTTCATCAACCAGAGAAAAAGACACTGGAAACCATCTGAAGATATGCAATTTGTGGTGATGGATGCTGCTCATCATCATCCACAGTATTACATGGACTCCGTCTTGGGGAATCCTTTCCCATTTGATATCTCTCCCACTCTTCTCTAA

mRNA sequence

ATGGATGGTCCAAGTGGGAGTTCTTCAGGAGGAGGTATGATGAATTTTGTTGATCAAAATAGTCATAATGGGTTTGGTTCCATGATGATGATGATGCCTTTGATGTCCACCTCTCATCAACAACAACACCACCACCACCAGGGAGATGCATGTAGCTCGTTTCTTCCTCCTCCTCCTCCGCCGCCGCCGCCTAATTACACCAACAATAACACTTCTAATTCAATTTCTTACTTCTTGGATGAAACCAACAATAACATCAACGAGGGTAGTAATGGTAATTCTTCATGTGAATTGAAGGCCAAAATCATGGGTCATCCCCACTACCACCGCTTGCTTGTTGCCTATGTCAATTGCCGGAAGGTAATAATAATAGTAAATGGTATTCTTTTTGGGACCCGGGAGCGTAGGCTGAGATCTGAAGCTTTTTGGCAGGTGGGGGCGCCGCCGGAAGTGGTGGCGAGGCTGGAACAAGCGTGTGCATCTGCAGCCACAATGAGTGGTACGTCTTGTATTGGACAAGATCCGGGGCTTGATCAGTTCATGGAGGCTTACTGTGAAATGCTCACCAAATATGAACAAGAACTTTCTAAACCCTTTAGGGATGCCATGCTTTTTCTTCAACGAATTGAGTGCCAATTCAAAGCTCTCTCTATCTCCTCCTCCTCCGATGCTGATTGTCATTCCCTCTGCAAAATAGTTGTCTTTCTACGAATTGACAGTGAGGCATTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATGAATAGGCAGTCAATTGACCCCTGGGCGGAAGACCATGAACTGAAAGGTCAACTCCTCCGAAAATACAGCAGATACTTGGGCAGTCTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGCTACCAAAGGAGGCCAGGCAACAGCTCCTGGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCCGAATCACAGAAGGTAGCTTTAGCTGAATCAACTGGGTTAGATCAAAAGCAAATCAACAACTGGTTCATCAACCAGAGAAAAAGACACTGGAAACCATCTGAAGATATGCAATTTGTGGTGATGGATGCTGCTCATCATCATCCACAGTATTACATGGACTCCGTCTTGGGGAATCCTTTCCCATTTGATATCTCTCCCACTCTTCTCTAA

Coding sequence (CDS)

ATGGATGGTCCAAGTGGGAGTTCTTCAGGAGGAGGTATGATGAATTTTGTTGATCAAAATAGTCATAATGGGTTTGGTTCCATGATGATGATGATGCCTTTGATGTCCACCTCTCATCAACAACAACACCACCACCACCAGGGAGATGCATGTAGCTCGTTTCTTCCTCCTCCTCCTCCGCCGCCGCCGCCTAATTACACCAACAATAACACTTCTAATTCAATTTCTTACTTCTTGGATGAAACCAACAATAACATCAACGAGGGTAGTAATGGTAATTCTTCATGTGAATTGAAGGCCAAAATCATGGGTCATCCCCACTACCACCGCTTGCTTGTTGCCTATGTCAATTGCCGGAAGGTAATAATAATAGTAAATGGTATTCTTTTTGGGACCCGGGAGCGTAGGCTGAGATCTGAAGCTTTTTGGCAGGTGGGGGCGCCGCCGGAAGTGGTGGCGAGGCTGGAACAAGCGTGTGCATCTGCAGCCACAATGAGTGGTACGTCTTGTATTGGACAAGATCCGGGGCTTGATCAGTTCATGGAGGCTTACTGTGAAATGCTCACCAAATATGAACAAGAACTTTCTAAACCCTTTAGGGATGCCATGCTTTTTCTTCAACGAATTGAGTGCCAATTCAAAGCTCTCTCTATCTCCTCCTCCTCCGATGCTGATTGTCATTCCCTCTGCAAAATAGTTGTCTTTCTACGAATTGACAGTGAGGCATTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATGAATAGGCAGTCAATTGACCCCTGGGCGGAAGACCATGAACTGAAAGGTCAACTCCTCCGAAAATACAGCAGATACTTGGGCAGTCTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGCTACCAAAGGAGGCCAGGCAACAGCTCCTGGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCCGAATCACAGAAGGTAGCTTTAGCTGAATCAACTGGGTTAGATCAAAAGCAAATCAACAACTGGTTCATCAACCAGAGAAAAAGACACTGGAAACCATCTGAAGATATGCAATTTGTGGTGATGGATGCTGCTCATCATCATCCACAGTATTACATGGACTCCGTCTTGGGGAATCCTTTCCCATTTGATATCTCTCCCACTCTTCTCTAA

Protein sequence

MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHHHQGDACSSFLPPPPPPPPPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL
Homology
[Close]
BLAST of Carg13675 vs. NCBI nr
Match: XP_022949951.1 (homeobox protein SHOOT MERISTEMLESS-like [Cucurbita moschata])

HSP 1 Score: 522.7 bits (1345), Expect = 1.1e-144
Identity = 264/303 (87.13%), Postives = 264/303 (87.13%), Query Frame = 0 

Query: 86  INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQV 145
           INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRK                        V
Sbjct: 84  INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRK------------------------V 143

Query: 146 GAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLF 205
           GAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLF
Sbjct: 144 GAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLF 203

Query: 206 LQRIECQFKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSIDPWAE 265
           LQRIECQFKALSISSSSDA C              EAFDRNGSSEEEVDMNRQSIDPWAE
Sbjct: 204 LQRIECQFKALSISSSSDAGC-------------GEAFDRNGSSEEEVDMNRQSIDPWAE 263

Query: 266 DHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVA 325
           DHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVA
Sbjct: 264 DHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVA 323

Query: 326 LAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISP 385
           LAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISP
Sbjct: 324 LAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISP 349

Query: 386 TLL 389
           TLL
Sbjct: 384 TLL 349

[Close]
BLAST of Carg13675 vs. NCBI nr
Match: XP_022979101.1 (homeobox protein SHOOT MERISTEMLESS-like [Cucurbita maxima])

HSP 1 Score: 518.1 bits (1333), Expect = 2.6e-143
Identity = 262/303 (86.47%), Postives = 262/303 (86.47%), Query Frame = 0 

Query: 86  INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQV 145
           INEGSNGNS CELKAKIMGHPHYHRLLVAYVNCRK                        V
Sbjct: 84  INEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRK------------------------V 143

Query: 146 GAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLF 205
           GAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLF
Sbjct: 144 GAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLF 203

Query: 206 LQRIECQFKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSIDPWAE 265
           LQRIECQFKALSISSSSDA C              EAFDRNGSSEEEVDMN QSIDPWAE
Sbjct: 204 LQRIECQFKALSISSSSDAGC-------------GEAFDRNGSSEEEVDMNGQSIDPWAE 263

Query: 266 DHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVA 325
           DHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVA
Sbjct: 264 DHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVA 323

Query: 326 LAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISP 385
           LAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISP
Sbjct: 324 LAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISP 349

Query: 386 TLL 389
           TLL
Sbjct: 384 TLL 349

[Close]
BLAST of Carg13675 vs. NCBI nr
Match: XP_023544876.1 (homeobox protein SHOOT MERISTEMLESS-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 514.6 bits (1324), Expect = 2.9e-142
Identity = 260/303 (85.81%), Postives = 261/303 (86.14%), Query Frame = 0 

Query: 86  INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQV 145
           INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRK                        V
Sbjct: 87  INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRK------------------------V 146

Query: 146 GAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLF 205
           GAPP+VVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYE ELSKPFRDAMLF
Sbjct: 147 GAPPDVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEHELSKPFRDAMLF 206

Query: 206 LQRIECQFKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSIDPWAE 265
           LQRIECQFKALSISSSSDA C              EAFDRNGSSEEEVD N QSIDPWAE
Sbjct: 207 LQRIECQFKALSISSSSDAGC-------------GEAFDRNGSSEEEVDKNGQSIDPWAE 266

Query: 266 DHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVA 325
           DHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVA
Sbjct: 267 DHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVA 326

Query: 326 LAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISP 385
           LAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISP
Sbjct: 327 LAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISP 352

Query: 386 TLL 389
           TLL
Sbjct: 387 TLL 352

[Close]
BLAST of Carg13675 vs. NCBI nr
Match: XP_022132524.1 (homeobox protein SBH1 [Momordica charantia])

HSP 1 Score: 448.0 bits (1151), Expect = 3.3e-122
Identity = 233/292 (79.79%), Postives = 241/292 (82.53%), Query Frame = 0 

Query: 98  LKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVVARLEQ 157
           +KAKIM HPHYHRLL AYVNCRK                        VGAPPEVVARLEQ
Sbjct: 103 VKAKIMAHPHYHRLLAAYVNCRK------------------------VGAPPEVVARLEQ 162

Query: 158 ACASAATMSGT-SCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKAL 217
           ACASAAT+SGT SCIG+DP LDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRI+CQFKAL
Sbjct: 163 ACASAATISGTSSCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDCQFKAL 222

Query: 218 SISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRK 277
           SISSSSDA C              EAFDRNGSSEEEVD+N  SIDP AED ELKGQLLRK
Sbjct: 223 SISSSSDAAC-------------GEAFDRNGSSEEEVDINGHSIDPQAEDRELKGQLLRK 282

Query: 278 YSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQ 337
           YS YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQK+ALA+STGLDQKQ
Sbjct: 283 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQ 342

Query: 338 INNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 389
           INNWFINQRKRHWKPSEDMQFVVMDAA  HPQYYMD+VLGNPFP DISPTLL
Sbjct: 343 INNWFINQRKRHWKPSEDMQFVVMDAA--HPQYYMDTVLGNPFPLDISPTLL 355

[Close]
BLAST of Carg13675 vs. NCBI nr
Match: XP_023003991.1 (homeobox protein knotted-1-like LET6 [Cucurbita maxima])

HSP 1 Score: 440.3 bits (1131), Expect = 6.9e-120
Identity = 232/299 (77.59%), Postives = 240/299 (80.27%), Query Frame = 0 

Query: 93  NSSCELKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVV 152
           +SSCELKAKIMGHPHYHRLL AYVNCRK                        VGAPPEVV
Sbjct: 107 SSSCELKAKIMGHPHYHRLLAAYVNCRK------------------------VGAPPEVV 166

Query: 153 ARLEQACASAATMSGTS---CIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRI 212
           ARLE ACASA TMSGTS   CIG+DP LDQFMEAYCEMLTKYEQELSKPFRDAMLFL RI
Sbjct: 167 ARLEGACASALTMSGTSCTGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRI 226

Query: 213 ECQFKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSIDPWAEDHEL 272
           ECQFKALSI SSSDA C              EAF+RNGSSEEEVD+N  SIDP AED EL
Sbjct: 227 ECQFKALSI-SSSDAVC-------------GEAFERNGSSEEEVDINGHSIDPQAEDREL 286

Query: 273 KGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAES 332
           KGQLLRKYS  LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQK+ALA+S
Sbjct: 287 KGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQS 346

Query: 333 TGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 389
           TGLDQKQINNWFINQRKRHWKPSEDMQFVVMD    HPQYYMD++LGNPFP DISPTLL
Sbjct: 347 TGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGG--HPQYYMDTMLGNPFPLDISPTLL 365

[Close]
BLAST of Carg13675 vs. TAIR10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor)

HSP 1 Score: 395.2 bits (1014), Expect = 4.6e-110
Identity = 210/310 (67.74%), Postives = 228/310 (73.55%), Query Frame = 0 

Query: 86  INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQV 145
           IN  S+       KAKIM HPHYHRLL AYVNC+K                        V
Sbjct: 109 INPCSSXXXXXXXKAKIMAHPHYHRLLAAYVNCQK------------------------V 168

Query: 146 GAPPEVVARLEQAC----ASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRD 205
           GAPPEVVARLE+AC        +M  T C+G+DPGLDQFMEAYCEML KYEQELSKPF++
Sbjct: 169 GAPPEVVARLEEACXXXXXXXXSMGPTGCLGEDPGLDQFMEAYCEMLVKYEQELSKPFKE 228

Query: 206 AMLFLQRIECQFKALSISSSSDADCHSLCKIVVFLRIDSEAFDR--NGSSEEEVDMNRQS 265
           AM+FLQR+ECQFK+LS+SS S            F      A DR  NGSSEEEVDMN + 
Sbjct: 229 AMVFLQRVECQFKSLSLSSPSS-----------FSGYGETAIDRNNNGSSEEEVDMNNEF 288

Query: 266 IDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 325
           +DP AED ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS
Sbjct: 289 VDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 348

Query: 326 ESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPF 385
           E QK+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA H H  Y+MD+VLGNPF
Sbjct: 349 EQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPH-HYFMDNVLGNPF 382

Query: 386 PFD-ISPTLL 389
           P D IS T+L
Sbjct: 409 PMDHISSTML 382

[Close]
BLAST of Carg13675 vs. TAIR10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana)

HSP 1 Score: 268.1 bits (684), Expect = 8.6e-72
Identity = 153/301 (50.83%), Postives = 180/301 (59.80%), Query Frame = 0 

Query: 98  LKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVVARLEQ 157
           +KAKI+ HPHY  LL AY++C+K                        +GAPP+VV R+  
Sbjct: 134 MKAKIIAHPHYSTLLQAYLDCQK------------------------IGAPPDVVDRITA 193

Query: 158 A-----CASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQ 217
           A          +    S   +DP LDQFMEAYC+ML KY +EL++P ++AM F++RIE Q
Sbjct: 194 ARQDFEARQQRSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQ 253

Query: 218 FKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNR------QSIDPWAED 277
              L         C S   I   L       D  GSS+EE + N         IDP AED
Sbjct: 254 LSML---------CQSPIHI---LNNPDGKSDNMGSSDEEQENNSGGETELPEIDPRAED 313

Query: 278 HELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVAL 337
            ELK  LL+KYS YL SLKQE  KK+KKGKLPKEARQ+LL WW  HYKWPYPSES+KVAL
Sbjct: 314 RELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVAL 373

Query: 338 AESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAH--HHPQYYMDSVLGNPFPFDIS 386
           AESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMD     HH   YMD       P+ + 
Sbjct: 374 AESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQHPHHAALYMDGHYMGDGPYRLG 398

[Close]
BLAST of Carg13675 vs. TAIR10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6)

HSP 1 Score: 226.1 bits (575), Expect = 3.7e-59
Identity = 126/280 (45.00%), Postives = 165/280 (58.93%), Query Frame = 0 

Query: 86  INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQV 145
           I    +  S   +KAKI  HP Y RLL AY++C+K                       QV
Sbjct: 73  IRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKK----------------------QV 132

Query: 146 GAPPEVVARLEQACASA----ATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRD 205
           GAPPE+   LE+    +      +  +SC G DP LD+FME YC++L KY+ +L++PF +
Sbjct: 133 GAPPEIACLLEEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDE 192

Query: 206 AMLFLQRIECQFKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSID 265
           A  FL +IE Q + L     S        + V    + S   + +G   E  +  RQ   
Sbjct: 193 ATCFLNKIEMQLRNLCTGVES-------ARGVSEDGVISSDEELSGGDHEVAEDGRQR-- 252

Query: 266 PWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 325
              ED +LK +LLRK+   + +LK EF KK+KKGKLP+EARQ LLDWW+ HYKWPYP+E 
Sbjct: 253 --CEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEG 312

Query: 326 QKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 362
            K+ALA++TGLDQKQINNWFINQRKRHWKPSE+M F +MD
Sbjct: 313 DKIALADATGLDQKQINNWFINQRKRHWKPSENMPFAMMD 319

[Close]
BLAST of Carg13675 vs. TAIR10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2)

HSP 1 Score: 206.8 bits (525), Expect = 2.3e-53
Identity = 116/280 (41.43%), Postives = 152/280 (54.29%), Query Frame = 0 

Query: 86  INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQV 145
           I +  +  S   +K+KI  HP Y RLL  Y++C+K                        V
Sbjct: 57  IRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQK------------------------V 116

Query: 146 GAPPEVVARLEQACAS----AATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRD 205
           GAP E+   LE+           ++  SC G DP LD+FME YC++L KY+ +L++PF +
Sbjct: 117 GAPMEIACILEEIQRENHVYKRDVAPLSCFGADPELDEFMETYCDILVKYKTDLARPFDE 176

Query: 206 AMLFLQRIECQFKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSID 265
           A  F+ +IE Q + L    +S                D                      
Sbjct: 177 ATTFINKIEMQLQNLCTGPASATALS-----------DDXXXXXXXXXXXXXXXXXXXXX 236

Query: 266 PWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 325
             + D +LK QLLRK+  ++ SLK EF KK+KKGKLP+EARQ LLDWW+ H KWPYP+E 
Sbjct: 237 XXSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEG 296

Query: 326 QKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 362
            K++LAE TGLDQKQINNWFINQRKRHWKPSE+M F +MD
Sbjct: 297 DKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMD 301

[Close]
BLAST of Carg13675 vs. TAIR10
Match: AT5G25220.1 (KNOTTED1-like homeobox gene 3)

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-24
Identity = 84/265 (31.70%), Postives = 128/265 (48.30%), Query Frame = 0 

Query: 99  KAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVVARLEQA 158
           KA+I+ HP Y +LL A+V C ++   V        ++  R +A  Q+     VVA+    
Sbjct: 160 KAEILSHPLYEQLLSAHVACLRIATPV--------DQLPRIDA--QLAQSQHVVAKY--- 219

Query: 159 CASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFR----DAMLFLQRIECQFK 218
             SA   +    +G D  LDQFM  Y  +L  ++++L +  R    +A++    IE   +
Sbjct: 220 --SALGAAAQGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQ 279

Query: 219 ALS---------ISSSSDADCHSLCKIVVF-LRIDSEAFDRNGSSEEEVDMNRQSIDPWA 278
           +L+          + S D D        +F   +D   F     +E E  +  +      
Sbjct: 280 SLTGVSPGEGMGATMSDDEDEQVESDANMFDGGLDVLGFGPLIPTESERSLMER------ 339

Query: 279 EDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKV 338
              ELK +L + Y   +  +++E ++KR+ GKLP +    L  WW  H KWPYP+E  K 
Sbjct: 340 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKA 399

Query: 339 ALAESTGLDQKQINNWFINQRKRHW 350
            L + TGL  KQINNWFINQRKR+W
Sbjct: 400 RLVQETGLQLKQINNWFINQRKRNW 403

[Close]
BLAST of Carg13675 vs. Swiss-Prot
Match: sp|P46608|HSBH1_SOYBN (Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 7.6e-110
Identity = 209/296 (70.61%), Postives = 229/296 (77.36%), Query Frame = 0 

Query: 99  KAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVVARLEQA 158
           KAKIM HPHYHRLL AYVNC+K                        VGAPPEVVARLE+A
Sbjct: 125 KAKIMAHPHYHRLLAAYVNCQK------------------------VGAPPEVVARLEEA 184

Query: 159 CASAATM------SGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQ 218
           CASAATM      +G+SCIG+DP LDQFMEAYCEMLTKYEQELSKP ++AMLFLQRIECQ
Sbjct: 185 CASAATMAGGDAAAGSSCIGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQ 244

Query: 219 FKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQ 278
           FK L+ISSS  A               +E  DRNGSSEE+VD++   IDP AED +LKGQ
Sbjct: 245 FKNLTISSSDFA--------------SNEGGDRNGSSEEDVDLHNM-IDPQAEDRDLKGQ 304

Query: 279 LLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGL 338
           LLRKYS YLGSLKQEFMKKRKKGKLPKEARQQLL+WW+RHYKWPYPSESQK+ALAESTGL
Sbjct: 305 LLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGL 364

Query: 339 DQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 389
           DQKQINNWFINQRKRHWKPSEDMQFVVMD +  HP YYMD+VLGNPFP D+S  +L
Sbjct: 365 DQKQINNWFINQRKRHWKPSEDMQFVVMDPS--HPHYYMDNVLGNPFPMDLSHPML 379

[Close]
BLAST of Carg13675 vs. Swiss-Prot
Match: sp|Q38874|STM_ARATH (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 SV=2)

HSP 1 Score: 395.2 bits (1014), Expect = 8.4e-109
Identity = 210/310 (67.74%), Postives = 228/310 (73.55%), Query Frame = 0 

Query: 86  INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQV 145
           IN  S+       KAKIM HPHYHRLL AYVNC+K                        V
Sbjct: 109 INPCSSXXXXXXXKAKIMAHPHYHRLLAAYVNCQK------------------------V 168

Query: 146 GAPPEVVARLEQAC----ASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRD 205
           GAPPEVVARLE+AC        +M  T C+G+DPGLDQFMEAYCEML KYEQELSKPF++
Sbjct: 169 GAPPEVVARLEEACXXXXXXXXSMGPTGCLGEDPGLDQFMEAYCEMLVKYEQELSKPFKE 228

Query: 206 AMLFLQRIECQFKALSISSSSDADCHSLCKIVVFLRIDSEAFDR--NGSSEEEVDMNRQS 265
           AM+FLQR+ECQFK+LS+SS S            F      A DR  NGSSEEEVDMN + 
Sbjct: 229 AMVFLQRVECQFKSLSLSSPSS-----------FSGYGETAIDRNNNGSSEEEVDMNNEF 288

Query: 266 IDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 325
           +DP AED ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS
Sbjct: 289 VDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 348

Query: 326 ESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPF 385
           E QK+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA H H  Y+MD+VLGNPF
Sbjct: 349 EQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPH-HYFMDNVLGNPF 382

Query: 386 PFD-ISPTLL 389
           P D IS T+L
Sbjct: 409 PMDHISSTML 382

[Close]
BLAST of Carg13675 vs. Swiss-Prot
Match: sp|O22299|LET6_SOLLC (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=2 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 6.0e-107
Identity = 201/296 (67.91%), Postives = 225/296 (76.01%), Query Frame = 0 

Query: 99  KAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVVARLEQA 158
           K+KIM HPHYHRLL AY+NC+K                        +GAPPEVVARLE+ 
Sbjct: 97  KSKIMAHPHYHRLLTAYLNCQK------------------------IGAPPEVVARLEEI 156

Query: 159 CASAATM------SGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQ 218
           CA++ATM      SG   IG+DP LDQFMEAYCEMLTKYEQELSKPF++AM+FL RIECQ
Sbjct: 157 CATSATMGRSSSSSGGGIIGEDPALDQFMEAYCEMLTKYEQELSKPFKEAMVFLSRIECQ 216

Query: 219 FKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQ 278
           FKAL+++ +S  +               EA DRNGSS+EEVD+N   IDP AED ELKGQ
Sbjct: 217 FKALTLAPNSSHESAL-----------GEAMDRNGSSDEEVDVNNSFIDPQAEDRELKGQ 276

Query: 279 LLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGL 338
           LLRKYS YLGSLKQEFMKKRKKGKLPKEARQQL+DWW RH KWPYPSESQK+ALAESTGL
Sbjct: 277 LLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALAESTGL 336

Query: 339 DQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 389
           DQKQINNWFINQRKRHWKPSEDMQFVVMDAA  HP YYMD+VL N FP D++P+LL
Sbjct: 337 DQKQINNWFINQRKRHWKPSEDMQFVVMDAA--HPHYYMDNVLANHFPMDMTPSLL 355

[Close]
BLAST of Carg13675 vs. Swiss-Prot
Match: sp|Q9M6D9|STM_BRAOL (Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.9e-105
Identity = 205/302 (67.88%), Postives = 226/302 (74.83%), Query Frame = 0 

Query: 94  SSCELKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVVA 153
           SS  +KAKIM HPHYHRLL+AYVNC+K                        VGAPPEV A
Sbjct: 119 SSLLVKAKIMAHPHYHRLLLAYVNCQK------------------------VGAPPEVQA 178

Query: 154 RLEQAC----ASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRI 213
           RLE+ C    A+AA+M  T  +G+DPGLDQFMEAYCEML KYEQELSKPF++AM+FLQ +
Sbjct: 179 RLEETCSSAAAAAASMGPTGSLGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQHV 238

Query: 214 ECQFKALSISSSSDADCHSLCKIVVFLRIDSEAFDR--NGSSEEEVDMNRQSIDPWAEDH 273
           ECQFK+LS+SS S             L     A +R  NGSSEEEVDMN + +DP AED 
Sbjct: 239 ECQFKSLSLSSPSS------------LGYGEAAIERNNNGSSEEEVDMNNEFVDPQAEDR 298

Query: 274 ELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALA 333
           ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSE QK+ALA
Sbjct: 299 ELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALA 358

Query: 334 ESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFD-ISPT 389
           ESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA  H   Y+M +VLGNPFP D IS T
Sbjct: 359 ESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAT-HPLHYFMGNVLGNPFPIDHISGT 383

[Close]
BLAST of Carg13675 vs. Swiss-Prot
Match: sp|P46639|KNAT1_ARATH (Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana OX=3702 GN=KNAT1 PE=1 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.5e-70
Identity = 153/301 (50.83%), Postives = 180/301 (59.80%), Query Frame = 0 

Query: 98  LKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVVARLEQ 157
           +KAKI+ HPHY  LL AY++C+K                        +GAPP+VV R+  
Sbjct: 134 MKAKIIAHPHYSTLLQAYLDCQK------------------------IGAPPDVVDRITA 193

Query: 158 A-----CASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQ 217
           A          +    S   +DP LDQFMEAYC+ML KY +EL++P ++AM F++RIE Q
Sbjct: 194 ARQDFEARQQRSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQ 253

Query: 218 FKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNR------QSIDPWAED 277
              L         C S   I   L       D  GSS+EE + N         IDP AED
Sbjct: 254 LSML---------CQSPIHI---LNNPDGKSDNMGSSDEEQENNSGGETELPEIDPRAED 313

Query: 278 HELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVAL 337
            ELK  LL+KYS YL SLKQE  KK+KKGKLPKEARQ+LL WW  HYKWPYPSES+KVAL
Sbjct: 314 RELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVAL 373

Query: 338 AESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAH--HHPQYYMDSVLGNPFPFDIS 386
           AESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMD     HH   YMD       P+ + 
Sbjct: 374 AESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQHPHHAALYMDGHYMGDGPYRLG 398

[Close]
BLAST of Carg13675 vs. TrEMBL
Match: tr|A0A1S3B0X4|A0A1S3B0X4_CUCME (homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103484637 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 5.3e-116
Identity = 226/296 (76.35%), Postives = 234/296 (79.05%), Query Frame = 0 

Query: 97  ELKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVVARLE 156
           E+KAKIM HPHYHRLL AYVNCRK                        VGAPPEVVARLE
Sbjct: 99  EVKAKIMAHPHYHRLLTAYVNCRK------------------------VGAPPEVVARLE 158

Query: 157 QACASAATMS----GTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQ 216
           +ACASA TMS    G  CIG+DP LDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRI+ Q
Sbjct: 159 EACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQ 218

Query: 217 FKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQ 276
           FKALSISSS        C          EAFDRNGSSEEEVD+N  SIDP AED ELKGQ
Sbjct: 219 FKALSISSS---HLPPAC---------GEAFDRNGSSEEEVDINGHSIDPQAEDRELKGQ 278

Query: 277 LLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGL 336
           LLRKYS YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQK+ALA+STGL
Sbjct: 279 LLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGL 338

Query: 337 DQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 389
           DQKQINNWFINQRKRHWKPSEDMQFVVMDAA  HPQYYMD+VLGNPFP DISP LL
Sbjct: 339 DQKQINNWFINQRKRHWKPSEDMQFVVMDAA--HPQYYMDAVLGNPFPLDISPALL 356

[Close]
BLAST of Carg13675 vs. TrEMBL
Match: tr|A0A0A0KJU4|A0A0A0KJU4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513430 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 5.3e-116
Identity = 226/296 (76.35%), Postives = 234/296 (79.05%), Query Frame = 0 

Query: 97  ELKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVVARLE 156
           E+KAKIM HPHYHRLL AYVNCRK                        VGAPPEVVARLE
Sbjct: 94  EVKAKIMAHPHYHRLLAAYVNCRK------------------------VGAPPEVVARLE 153

Query: 157 QACASAATMS----GTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQ 216
           +ACASA TMS    G  CIG+DP LDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRI+ Q
Sbjct: 154 EACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQ 213

Query: 217 FKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQ 276
           FKALSISSS        C          EAFDRNGSSEEEVD+N  SIDP AED ELKGQ
Sbjct: 214 FKALSISSS---HLPPAC---------GEAFDRNGSSEEEVDINGHSIDPQAEDRELKGQ 273

Query: 277 LLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGL 336
           LLRKYS YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQK+ALA+STGL
Sbjct: 274 LLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGL 333

Query: 337 DQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 389
           DQKQINNWFINQRKRHWKPSEDMQFVVMDAA  HPQYYMD+VLGNPFP DISP LL
Sbjct: 334 DQKQINNWFINQRKRHWKPSEDMQFVVMDAA--HPQYYMDTVLGNPFPLDISPALL 351

[Close]
BLAST of Carg13675 vs. TrEMBL
Match: tr|A0A061GI15|A0A061GI15_THECC (KNOX/ELK homeobox transcription factor isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_030302 PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 3.4e-115
Identity = 219/293 (74.74%), Postives = 233/293 (79.52%), Query Frame = 0 

Query: 98  LKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVVARLEQ 157
           +KAKIM HPHYHRLL AYVNC+K                        VGAPPEVVARLE+
Sbjct: 104 VKAKIMAHPHYHRLLAAYVNCQK------------------------VGAPPEVVARLEE 163

Query: 158 ACASAATM--SGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKA 217
           ACASAATM  SGT C+G+DP LDQFMEAYCEMLTKYEQELSKPF++AMLFLQR+ECQFKA
Sbjct: 164 ACASAATMGPSGTGCLGEDPALDQFMEAYCEMLTKYEQELSKPFKEAMLFLQRVECQFKA 223

Query: 218 LSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLR 277
           L++SS S A     C          EA DRNGSSEEEVD+N   IDP AED ELKGQLLR
Sbjct: 224 LTVSSPSSA-----C---------GEAADRNGSSEEEVDVNNNFIDPLAEDRELKGQLLR 283

Query: 278 KYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQK 337
           KYS YLGSLKQEFMKKRKKGKLPKEARQQLLDWW RHYKWPYPSESQK+ALAESTGLDQK
Sbjct: 284 KYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWGRHYKWPYPSESQKIALAESTGLDQK 343

Query: 338 QINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 389
           QINNWFINQRKRHWKPSEDMQFVVMDA   HP YYMD+VLGNPFP D+SPTLL
Sbjct: 344 QINNWFINQRKRHWKPSEDMQFVVMDAT--HPHYYMDNVLGNPFPMDLSPTLL 356

[Close]
BLAST of Carg13675 vs. TrEMBL
Match: tr|A0A067JMJ4|A0A067JMJ4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21170 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.1e-113
Identity = 216/301 (71.76%), Postives = 237/301 (78.74%), Query Frame = 0 

Query: 90  SNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPP 149
           SN  S+  +KAKIM HPHYHRLL AY+NC+K                        VGAPP
Sbjct: 102 SNDGSAASVKAKIMAHPHYHRLLAAYINCQK------------------------VGAPP 161

Query: 150 EVVARLEQACASAATM--SGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQ 209
           EVVARLE+ACASAA M  +GTSC+G+DP LDQFMEAYCEMLTKYEQELSKPF++AMLFLQ
Sbjct: 162 EVVARLEEACASAAAMGPTGTSCVGEDPALDQFMEAYCEMLTKYEQELSKPFKEAMLFLQ 221

Query: 210 RIECQFKALSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSIDPWAEDH 269
           R+ECQFKAL++SS + A     C          EA +RNGSSEEEVD+N   IDP AED 
Sbjct: 222 RVECQFKALTVSSPNSA-----C---------GEAGERNGSSEEEVDVNNNFIDPQAEDQ 281

Query: 270 ELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALA 329
           ELKGQLLR+YS  LG+LKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQK+ALA
Sbjct: 282 ELKGQLLRRYSGCLGNLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALA 341

Query: 330 ESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTL 389
           ESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA   HP YY+D+VLGNPFP DISPTL
Sbjct: 342 ESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAT--HPHYYVDNVLGNPFPMDISPTL 362

[Close]
BLAST of Carg13675 vs. TrEMBL
Match: tr|B9RXF1|B9RXF1_RICCO (Homeobox protein knotted-1, putative OS=Ricinus communis OX=3988 GN=RCOM_0903280 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113
Identity = 215/293 (73.38%), Postives = 232/293 (79.18%), Query Frame = 0 

Query: 98  LKAKIMGHPHYHRLLVAYVNCRKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVVARLEQ 157
           +KAKIM HPHYHRLL AY+NC+K                        VGAPPEVV RLE+
Sbjct: 101 VKAKIMAHPHYHRLLAAYINCQK------------------------VGAPPEVVTRLEE 160

Query: 158 ACASAATM--SGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKA 217
           ACASAATM  +GTSCIG+DP LDQFMEAYCEMLTKYEQELSKPF++AMLFLQR+ECQFKA
Sbjct: 161 ACASAATMGQAGTSCIGEDPALDQFMEAYCEMLTKYEQELSKPFKEAMLFLQRVECQFKA 220

Query: 218 LSISSSSDADCHSLCKIVVFLRIDSEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLR 277
           L+++S + A                EA DRNGSSEEEVD+N   IDP AED ELKGQLLR
Sbjct: 221 LTVASPNSA--------------LGEASDRNGSSEEEVDVNNNFIDPQAEDQELKGQLLR 280

Query: 278 KYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQK 337
           +YS YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQK+ALAESTGLDQK
Sbjct: 281 RYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQK 340

Query: 338 QINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 389
           QINNWFINQRKRHWKPSEDMQFVVMDA   HP YYMD+VLGNPFP DISP LL
Sbjct: 341 QINNWFINQRKRHWKPSEDMQFVVMDAT--HPHYYMDNVLGNPFPMDISPALL 353

The following BLAST results are available for this feature:
BLAST of Carg13675 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949951.11.1e-14487.13homeobox protein SHOOT MERISTEMLESS-like [Cucurbita moschata][more]
XP_022979101.12.6e-14386.47homeobox protein SHOOT MERISTEMLESS-like [Cucurbita maxima][more]
XP_023544876.12.9e-14285.81homeobox protein SHOOT MERISTEMLESS-like [Cucurbita pepo subsp. pepo][more]
XP_022132524.13.3e-12279.79homeobox protein SBH1 [Momordica charantia][more]
XP_023003991.16.9e-12077.59homeobox protein knotted-1-like LET6 [Cucurbita maxima][more]
BLAST of Carg13675 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G62360.14.6e-11067.74KNOX/ELK homeobox transcription factor[more]
AT4G08150.18.6e-7250.83KNOTTED-like from Arabidopsis thaliana[more]
AT1G23380.23.7e-5945.00KNOTTED1-like homeobox gene 6[more]
AT1G70510.12.3e-5341.43KNOTTED-like from Arabidopsis thaliana 2[more]
AT5G25220.11.3e-2431.70KNOTTED1-like homeobox gene 3[more]
BLAST of Carg13675 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P46608|HSBH1_SOYBN7.6e-11070.61Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1[more]
sp|Q38874|STM_ARATH8.4e-10967.74Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 ... [more]
sp|O22299|LET6_SOLLC6.0e-10767.91Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=... [more]
sp|Q9M6D9|STM_BRAOL1.9e-10567.88Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=... [more]
sp|P46639|KNAT1_ARATH1.5e-7050.83Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana OX=3702 GN=KNAT1 PE=1 ... [more]
BLAST of Carg13675 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B0X4|A0A1S3B0X4_CUCME5.3e-11676.35homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103484637 PE=... [more]
tr|A0A0A0KJU4|A0A0A0KJU4_CUCSA5.3e-11676.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513430 PE=3 SV=1[more]
tr|A0A061GI15|A0A061GI15_THECC3.4e-11574.74KNOX/ELK homeobox transcription factor isoform 1 OS=Theobroma cacao OX=3641 GN=T... [more]
tr|A0A067JMJ4|A0A067JMJ4_JATCU1.1e-11371.76Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21170 PE=3 SV=1[more]
tr|B9RXF1|B9RXF1_RICCO1.4e-11373.38Homeobox protein knotted-1, putative OS=Ricinus communis OX=3988 GN=RCOM_0903280... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017970Homeobox_CS
IPR008422Homeobox_KN_domain
IPR005541KNOX2
IPR001356Homeobox_dom
IPR005539ELK_dom
IPR005540KNOX1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg13675-RACarg13675-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005540KNOX1SMARTSM01255KNOX1_2coord: 96..164
e-value: 2.7E-8
score: 43.6
IPR005540KNOX1PFAMPF03790KNOX1coord: 98..160
e-value: 2.7E-15
score: 55.7
IPR005539ELK domainSMARTSM01188ELK_2coord: 268..289
e-value: 2.0E-7
score: 40.7
IPR005539ELK domainPFAMPF03789ELKcoord: 268..289
e-value: 9.4E-10
score: 38.2
IPR005539ELK domainPROSITEPS51213ELKcoord: 268..288
score: 10.737
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 290..355
e-value: 4.4E-13
score: 59.5
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 288..351
score: 12.989
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 300..352
e-value: 8.31825E-12
score: 59.1793
IPR005541KNOX2SMARTSM01256KNOX2_2coord: 167..218
e-value: 2.1E-24
score: 97.0
IPR005541KNOX2PFAMPF03791KNOX2coord: 170..216
e-value: 2.8E-20
score: 71.7
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 286..358
e-value: 1.9E-21
score: 77.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..67
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 144..388
coord: 3..121
NoneNo IPR availablePANTHERPTHR11850:SF100HOMEOBOX PROTEIN SHOOT MERISTEMLESScoord: 144..388
coord: 3..121
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 308..347
e-value: 3.9E-17
score: 61.8
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 326..349
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 290..365