Carg07859 (gene) Silver-seed gourd

Overview
NameCarg07859
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionHomeobox protein knotted-1, putative
LocationCucurbita_argyrosperma_scaffold_066 : 501793 .. 504586 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGTCCTGGCGGAAGTTCTTCAGGTATGATGAATTTTGGAGATCAAAATAATAGTAATAATGGGTTATGTTCTTCCATGATGATGATGATGCCTTTAATGTCTTCTCACCACCACCACCACCACCATCAAGGAGATGCATGTAATCCATTTCCTCCTCTTCCTTCTCCTAATTACACTACCAACAACATCAACAACACCAACACTTCTTCTTCTTCTAACCCTATTTGTTACTTCATGGATGAACACACCACCACCACCACCAACAACAACAATGATAATGGGTGTTGTAATGCAAATTCGTCTTCTTGTGAATTGAAGGCCAAAATTATGGGTCATCCTCACTACCACCGCCTCCTTGCTGCCTATGTCAATTGTCGAAAGGTAACCAACCAACCAACTAACCAACCAACCAACTAACCAACTAACCACCATAAATAATAATAGACTTGTTTTTAGGACTCTCTCTATAGCTTTAGATCTGAAGAAGCTTTATTGTTTTGGACTCGTTTTCTCCCTTTTCTCAGGTGGGGGCGCCGCCGGATGTGGTGGCGAGGCTTGAAGGAGCGTGTGCATCTGCACTCACAATGAGTGGTACGTCTTGTACGGGGTGTATTGGTGAAGATCCGGCTCTTGACCAGTTCATGGAAGCTTATTGCGAGATGCTCACTAAATATGAACAAGAACTTTCCAAACCCTTCAGGGATGCCATGCTTTTTCTTCACCGAATTGAGTGCCAATTCAAAGCCCTCTCCATTTCCTCCTCCGACGCTGGTGAATTTTTCCACCAATTACTTTATTTTTAAATCAATTCATCTTCCTCTAATACTTTTTCATGCATGTTTATAATGCTTGTATAATTACATACCCCGTAGCTTCATTTATTATTCTTAGTGTATTAATTAGCTGATTTTTTTTTTTTTTTTTTTAATAATCCTAAACTGTTTGTGAAAAATTCTAAACCCTTTGATTTGTTTAATCTCTTTGTTTAAACTGTTTGGGGTTTGATTTTTCAATGCAATTAGTTCAGTGAAAAACTGTATTATTATTTTTGTTTCCATAACTGGAAATTAGGTTATCATCTAGATGTTTGTGTCAACTGTGATGTAGAACTGCAGGAATCCATCTGCGTATGGTTGATTGAGATCTAACAAGTCATTGAGTCATGTCCACTGGAGTGTTTATTTTCACTCTTTTTGAGTTCTAATTATCAATTCATTGTTTGTAATGCATTGATGAAGAGATTAAATGACATTATGTCCATGTTTTTTAGTCATTGGCTTGTGTTTTTGTTCTCTCATTCCTTGCCATTGCCTATACATTGTCTATATGATTCTATGTCTTCTATATTTTTCGCTCAAGTGATATAGGCTTCTTAAACCCTGGCCTTTTGCATTTTATCCTTTTGTTTAATGCTATTAAAATTGTAACGGCCCAGACTGACCGCTAGCAGATATTTTCCTCTTTTGGCTTCCTCTCAAAGCCTTAAAACGCGTTTGCTAGGATAAGGTATCTACAAGGGTATTTCGTCCTCCTCCCCAACCAATGTAGGATATCACATAAATTCATCGTTATGTTTGTTAAAATATCATTACTAGCCCAATAGGGTTAAGGCCAACCACTGAGTGACTATATCTATGTTAAGAAAATGATTATGAATTTTAGGAATAAATCTAGTAAAATGATTTAGTTATTTTTAAAAAAAATATTGAGAAATTTTAGGAATATATATAAATACCCCTCCACCCTACTTAGTTCATCCCAAGAAATCCCAATACAGAGTATACATAGTATTCTTCAAAGTGTCTCCCAAGAAATCCCAAGCAATACAAAGTAGTAGTATTCTTCAAAATGTCTTGTATTCTCTTCTCGATTGGTCGAGTGCTAGTGTTTCCCACGTAAAGTTAGTGTGTTCAACAATGTTGCTTTGGAAATATAGAACCCTCTTTGTTTTTGCTTTTCAACATCTCACCTGAATTTTCTGGTGTTTTGATTTGAAATTCAGTATGAAAGTACACAGTTTCTTTTTGTATTTTCTGCCTATCACCTTTACATGTTCGTATCTGTTCAAAAATCTTAGAAAATAGTGTCTGTTGTCATCTTCTTCCGAATAAGGAGTCATGTCCAAGAATACTTGATCATAATTAGCTCAACTGCAACCGAACCGATCAATGGGTTAATAACCATGGGGTGCTGATTTACGATAACATGTATGTTCGAGTTCATTTGATGGCTGATATATTGTATGCATACCACCCAGTTTGTGGTGAGGCATTTGAAAGGAATGGTTCATCTGAAGAGGAAGTTGATATCAATGGCCACTCTATCGACCCTCAAGCCGAAGACCGTGAACTGAAAGGTCAGCTCCTCCGCAAGTACAGTGGATGCTTGGGCAGTCTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGCTGCCTAAGGAGGCCAGACAACAGCTCCTTGACTGGTGGAGTAGACATTACAAGTGGCCTTATCCATCTGTATGTGTAATCTCACCATTTCCTATGTTGTTCTTGTAAGGGTTAGTTTAGATTGTAACTGTAATGTTGTGTTTTTGAACAGGAATCACAGAAGCTAGCATTGGCTCAATCCACTGGGTTGGATCAAAAGCAAATCAACAACTGGTTCATCAACCAAAGGAAAAGGCACTGGAAACCCTCTGAAGATATGCAGTTCGTGGTGATGGATGGTGGGCATCCGCAGTATTACATGGACACCGTGTTGGGCAATCCTTTTCCCTTGGATATCTCTCCCACTCTACTCTAA

mRNA sequence

ATGGATGGTCCTGGCGGAAGTTCTTCAGGTATGATGAATTTTGGAGATCAAAATAATAGTAATAATGGGTTATGTTCTTCCATGATGATGATGATGCCTTTAATGTCTTCTCACCACCACCACCACCACCATCAAGGAGATGCATGTAATCCATTTCCTCCTCTTCCTTCTCCTAATTACACTACCAACAACATCAACAACACCAACACTTCTTCTTCTTCTAACCCTATTTGTTACTTCATGGATGAACACACCACCACCACCACCAACAACAACAATGATAATGGGTGTTGTAATGCAAATTCGTCTTCTTGTGAATTGAAGGCCAAAATTATGGGTCATCCTCACTACCACCGCCTCCTTGCTGCCTATGTCAATTGTCGAAAGGTGGGGGCGCCGCCGGATGTGGTGGCGAGGCTTGAAGGAGCGTGTGCATCTGCACTCACAATGAGTGGTACGTCTTGTACGGGGTGTATTGGTGAAGATCCGGCTCTTGACCAGTTCATGGAAGCTTATTGCGAGATGCTCACTAAATATGAACAAGAACTTTCCAAACCCTTCAGGGATGCCATGCTTTTTCTTCACCGAATTGAGTGCCAATTCAAAGCCCTCTCCATTTCCTCCTCCGACGCTGGTTATCATCTAGATGTTTGTGTCAACTGTGATGTAGAACTGCAGGAATCCATCTGCCTCAACTGCAACCGAACCGATCAATGGGTTAATAACCATGGGGTGCTGATTTACGATAACATGTATGTTCGAGTTCATTTGATGGCTGATATATTGTATGCATACCACCCAGTTTGTGGTGAGGCATTTGAAAGGAATGGTTCATCTGAAGAGGAAGTTGATATCAATGGCCACTCTATCGACCCTCAAGCCGAAGACCGTGAACTGAAAGGTCAGCTCCTCCGCAAGTACAGTGGATGCTTGGGCAGTCTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGCTGCCTAAGGAGGCCAGACAACAGCTCCTTGACTGGTGGAGTAGACATTACAAGTGGCCTTATCCATCTGAATCACAGAAGCTAGCATTGGCTCAATCCACTGGGTTGGATCAAAAGCAAATCAACAACTGGTTCATCAACCAAAGGAAAAGGCACTGGAAACCCTCTGAAGATATGCAGTTCGTGGTGATGGATGGTGGGCATCCGCAGTATTACATGGACACCGTGTTGGGCAATCCTTTTCCCTTGGATATCTCTCCCACTCTACTCTAA

Coding sequence (CDS)

ATGGATGGTCCTGGCGGAAGTTCTTCAGGTATGATGAATTTTGGAGATCAAAATAATAGTAATAATGGGTTATGTTCTTCCATGATGATGATGATGCCTTTAATGTCTTCTCACCACCACCACCACCACCATCAAGGAGATGCATGTAATCCATTTCCTCCTCTTCCTTCTCCTAATTACACTACCAACAACATCAACAACACCAACACTTCTTCTTCTTCTAACCCTATTTGTTACTTCATGGATGAACACACCACCACCACCACCAACAACAACAATGATAATGGGTGTTGTAATGCAAATTCGTCTTCTTGTGAATTGAAGGCCAAAATTATGGGTCATCCTCACTACCACCGCCTCCTTGCTGCCTATGTCAATTGTCGAAAGGTGGGGGCGCCGCCGGATGTGGTGGCGAGGCTTGAAGGAGCGTGTGCATCTGCACTCACAATGAGTGGTACGTCTTGTACGGGGTGTATTGGTGAAGATCCGGCTCTTGACCAGTTCATGGAAGCTTATTGCGAGATGCTCACTAAATATGAACAAGAACTTTCCAAACCCTTCAGGGATGCCATGCTTTTTCTTCACCGAATTGAGTGCCAATTCAAAGCCCTCTCCATTTCCTCCTCCGACGCTGGTTATCATCTAGATGTTTGTGTCAACTGTGATGTAGAACTGCAGGAATCCATCTGCCTCAACTGCAACCGAACCGATCAATGGGTTAATAACCATGGGGTGCTGATTTACGATAACATGTATGTTCGAGTTCATTTGATGGCTGATATATTGTATGCATACCACCCAGTTTGTGGTGAGGCATTTGAAAGGAATGGTTCATCTGAAGAGGAAGTTGATATCAATGGCCACTCTATCGACCCTCAAGCCGAAGACCGTGAACTGAAAGGTCAGCTCCTCCGCAAGTACAGTGGATGCTTGGGCAGTCTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGCTGCCTAAGGAGGCCAGACAACAGCTCCTTGACTGGTGGAGTAGACATTACAAGTGGCCTTATCCATCTGAATCACAGAAGCTAGCATTGGCTCAATCCACTGGGTTGGATCAAAAGCAAATCAACAACTGGTTCATCAACCAAAGGAAAAGGCACTGGAAACCCTCTGAAGATATGCAGTTCGTGGTGATGGATGGTGGGCATCCGCAGTATTACATGGACACCGTGTTGGGCAATCCTTTTCCCTTGGATATCTCTCCCACTCTACTCTAA

Protein sequence

MDGPGGSSSGMMNFGDQNNSNNGLCSSMMMMMPLMSSHHHHHHHQGDACNPFPPLPSPNYTTNNINNTNTSSSSNPICYFMDEHTTTTTNNNNDNGCCNANSSSCELKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGTSCTGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDVELQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEVDINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVLGNPFPLDISPTLL
Homology
[Close]
BLAST of Carg07859 vs. NCBI nr
Match: XP_023518637.1 (homeobox protein knotted-1-like LET6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 509.2 bits (1310), Expect = 1.3e-140
Identity = 257/313 (82.11%), Postives = 257/313 (82.11%), Query Frame = 0 

Query: 104 SCELKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGTSCTGCIGEDP 163
           SCELKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGTSCTGCIGEDP
Sbjct: 103 SCELKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGTSCTGCIGEDP 162

Query: 164 ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDV 223
           ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDA            
Sbjct: 163 ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDA------------ 222

Query: 224 ELQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEV 283
                                                       VCGEAFERNGSSEEEV
Sbjct: 223 --------------------------------------------VCGEAFERNGSSEEEV 282

Query: 284 DINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY 343
           DINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY
Sbjct: 283 DINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY 342

Query: 344 KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVL 403
           KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVL
Sbjct: 343 KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVL 359

Query: 404 GNPFPLDISPTLL 417
           GNPFPLDISPTLL
Sbjct: 403 GNPFPLDISPTLL 359

[Close]
BLAST of Carg07859 vs. NCBI nr
Match: XP_022926891.1 (homeobox protein knotted-1-like LET6 [Cucurbita moschata])

HSP 1 Score: 507.7 bits (1306), Expect = 3.8e-140
Identity = 256/313 (81.79%), Postives = 257/313 (82.11%), Query Frame = 0 

Query: 104 SCELKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGTSCTGCIGEDP 163
           SCELKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALT+SGTSCTGCIGEDP
Sbjct: 105 SCELKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTISGTSCTGCIGEDP 164

Query: 164 ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDV 223
           ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDA            
Sbjct: 165 ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDA------------ 224

Query: 224 ELQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEV 283
                                                       VCGEAFERNGSSEEEV
Sbjct: 225 --------------------------------------------VCGEAFERNGSSEEEV 284

Query: 284 DINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY 343
           DINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY
Sbjct: 285 DINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY 344

Query: 344 KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVL 403
           KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVL
Sbjct: 345 KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVL 361

Query: 404 GNPFPLDISPTLL 417
           GNPFPLDISPTLL
Sbjct: 405 GNPFPLDISPTLL 361

[Close]
BLAST of Carg07859 vs. NCBI nr
Match: XP_023003991.1 (homeobox protein knotted-1-like LET6 [Cucurbita maxima])

HSP 1 Score: 506.5 bits (1303), Expect = 8.5e-140
Identity = 255/313 (81.47%), Postives = 257/313 (82.11%), Query Frame = 0 

Query: 104 SCELKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGTSCTGCIGEDP 163
           SCELKAKIMGHPHYHRLLAAYVNCRKVGAPP+VVARLEGACASALTMSGTSCTGCIGEDP
Sbjct: 109 SCELKAKIMGHPHYHRLLAAYVNCRKVGAPPEVVARLEGACASALTMSGTSCTGCIGEDP 168

Query: 164 ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDV 223
           ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDA            
Sbjct: 169 ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDA------------ 228

Query: 224 ELQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEV 283
                                                       VCGEAFERNGSSEEEV
Sbjct: 229 --------------------------------------------VCGEAFERNGSSEEEV 288

Query: 284 DINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY 343
           DINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY
Sbjct: 289 DINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY 348

Query: 344 KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVL 403
           KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDT+L
Sbjct: 349 KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTML 365

Query: 404 GNPFPLDISPTLL 417
           GNPFPLDISPTLL
Sbjct: 409 GNPFPLDISPTLL 365

[Close]
BLAST of Carg07859 vs. NCBI nr
Match: XP_004134981.2 (PREDICTED: homeobox protein knotted-1-like LET6 [Cucumis sativus] >KGN49079.1 hypothetical protein Csa_6G513430 [Cucumis sativus])

HSP 1 Score: 458.0 bits (1177), Expect = 3.5e-125
Identity = 238/312 (76.28%), Postives = 244/312 (78.21%), Query Frame = 0 

Query: 106 ELKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTM-SGTSCTGCIGEDPA 165
           E+KAKIM HPHYHRLLAAYVNCRKVGAPP+VVARLE ACASA+TM SG +  GCIGEDPA
Sbjct: 94  EVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPA 153

Query: 166 LDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDVE 225
           LDQFMEAYCEMLTKYEQELSKPFRDAMLFL RI+ QFKALSISSS    HL         
Sbjct: 154 LDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSS----HLP-------- 213

Query: 226 LQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEVD 285
                                                     P CGEAF+RNGSSEEEVD
Sbjct: 214 ------------------------------------------PACGEAFDRNGSSEEEVD 273

Query: 286 INGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK 345
           INGHSIDPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK
Sbjct: 274 INGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK 333

Query: 346 WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVLG 405
           WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HPQYYMDTVLG
Sbjct: 334 WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLG 351

Query: 406 NPFPLDISPTLL 417
           NPFPLDISP LL
Sbjct: 394 NPFPLDISPALL 351

[Close]
BLAST of Carg07859 vs. NCBI nr
Match: XP_022132524.1 (homeobox protein SBH1 [Momordica charantia])

HSP 1 Score: 458.0 bits (1177), Expect = 3.5e-125
Identity = 236/310 (76.13%), Postives = 241/310 (77.74%), Query Frame = 0 

Query: 107 LKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGTSCTGCIGEDPALD 166
           +KAKIM HPHYHRLLAAYVNCRKVGAPP+VVARLE ACASA T+SGTS   CIGEDPALD
Sbjct: 103 VKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEQACASAATISGTS--SCIGEDPALD 162

Query: 167 QFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDVELQ 226
           QFMEAYCEMLTKYEQELSKPFRDAMLFL RI+CQFKALSISSS                 
Sbjct: 163 QFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDCQFKALSISSSS---------------- 222

Query: 227 ESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEVDIN 286
                                                     CGEAF+RNGSSEEEVDIN
Sbjct: 223 ---------------------------------------DAACGEAFDRNGSSEEEVDIN 282

Query: 287 GHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP 346
           GHSIDPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP
Sbjct: 283 GHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP 342

Query: 347 YPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVLGNP 406
           YPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HPQYYMDTVLGNP
Sbjct: 343 YPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNP 355

Query: 407 FPLDISPTLL 417
           FPLDISPTLL
Sbjct: 403 FPLDISPTLL 355

[Close]
BLAST of Carg07859 vs. TAIR10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor)

HSP 1 Score: 386.7 bits (992), Expect = 1.8e-107
Identity = 203/312 (65.06%), Postives = 222/312 (71.15%), Query Frame = 0 

Query: 108 KAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGT-SCTGCIGEDPALD 167
           KAKIM HPHYHRLLAAYVNC+KVGAPP+VVARLE AC        +   TGC+GEDP LD
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACXXXXXXXXSMGPTGCLGEDPGLD 181

Query: 168 QFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDVELQ 227
           QFMEAYCEML KYEQELSKPF++AM+FL R+ECQFK+LS+SS  +               
Sbjct: 182 QFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSS--------------- 241

Query: 228 ESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEVDIN 287
                         + +G    D                          NGSSEEEVD+N
Sbjct: 242 -------------FSGYGETAIDR-----------------------NNNGSSEEEVDMN 301

Query: 288 GHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP 347
              +DPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP
Sbjct: 302 NEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP 361

Query: 348 YPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHP-QYYMDTVLGN 407
           YPSE QKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HP  Y+MD VLGN
Sbjct: 362 YPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHHYFMDNVLGN 382

Query: 408 PFPLD-ISPTLL 417
           PFP+D IS T+L
Sbjct: 422 PFPMDHISSTML 382

[Close]
BLAST of Carg07859 vs. TAIR10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana)

HSP 1 Score: 268.1 bits (684), Expect = 9.2e-72
Identity = 153/300 (51.00%), Postives = 179/300 (59.67%), Query Frame = 0 

Query: 107 LKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACA--SALTMSGTSCTGCIGEDPA 166
           +KAKI+ HPHY  LL AY++C+K+GAPPDVV R+  A     A     T        DP 
Sbjct: 134 MKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSRDPE 193

Query: 167 LDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDVE 226
           LDQFMEAYC+ML KY +EL++P ++AM F+ RIE Q   L  S      H+         
Sbjct: 194 LDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSP----IHI--------- 253

Query: 227 LQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEVD 286
                    N  D   +N G                          E  E N   E E+ 
Sbjct: 254 --------LNNPDGKSDNMG-----------------------SSDEEQENNSGGETELP 313

Query: 287 INGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK 346
                IDP+AEDRELK  LL+KYSG L SLKQE  KK+KKGKLPKEARQ+LL WW  HYK
Sbjct: 314 ----EIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYK 373

Query: 347 WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDG-GHPQY---YMD 401
           WPYPSES+K+ALA+STGLDQKQINNWFINQRKRHWKPSEDMQF+VMDG  HP +   YMD
Sbjct: 374 WPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQHPHHAALYMD 385

[Close]
BLAST of Carg07859 vs. TAIR10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6)

HSP 1 Score: 222.2 bits (565), Expect = 5.8e-58
Identity = 125/297 (42.09%), Postives = 166/297 (55.89%), Query Frame = 0 

Query: 107 LKAKIMGHPHYHRLLAAYVNCRK--VGAPPDVVARLEG-ACASALTMSGTSCTGCIGEDP 166
           +KAKI  HP Y RLL AY++C+K  VGAPP++   LE     S +       + C G DP
Sbjct: 85  IKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACLLEEIQRESDVYKQEVVPSSCFGADP 144

Query: 167 ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDV 226
            LD+FME YC++L KY+ +L++PF +A  FL++IE Q + L      A            
Sbjct: 145 ELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESA------------ 204

Query: 227 ELQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEV 286
                         + V+  GV+  D                        E     + EV
Sbjct: 205 --------------RGVSEDGVISSD------------------------EELSGGDHEV 264

Query: 287 DINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY 346
             +G     + EDR+LK +LLRK+   + +LK EF KK+KKGKLP+EARQ LLDWW+ HY
Sbjct: 265 AEDGRQ---RCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHY 324

Query: 347 KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMD 401
           KWPYP+E  K+ALA +TGLDQKQINNWFINQRKRHWKPSE+M F +MD     ++ +
Sbjct: 325 KWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDSSGSFFTE 328

[Close]
BLAST of Carg07859 vs. TAIR10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2)

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-52
Identity = 113/295 (38.31%), Postives = 153/295 (51.86%), Query Frame = 0 

Query: 107 LKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEG-ACASALTMSGTSCTGCIGEDPAL 166
           +K+KI  HP Y RLL  Y++C+KVGAP ++   LE     + +     +   C G DP L
Sbjct: 69  IKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCFGADPEL 128

Query: 167 DQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDVEL 226
           D+FME YC++L KY+ +L++PF +A  F+++IE Q + L    + A    D         
Sbjct: 129 DEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATALSDDXXXXXXXX 188

Query: 227 QESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEVDI 286
                          +N                                           
Sbjct: 189 XXXXXXXXXXXXXXXSN------------------------------------------- 248

Query: 287 NGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKW 346
                     DR+LK QLLRK+   + SLK EF KK+KKGKLP+EARQ LLDWW+ H KW
Sbjct: 249 ----------DRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKW 308

Query: 347 PYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMD 401
           PYP+E  K++LA+ TGLDQKQINNWFINQRKRHWKPSE+M F +MD  +  ++ +
Sbjct: 309 PYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMDDSNETFFTE 310

[Close]
BLAST of Carg07859 vs. TAIR10
Match: AT5G25220.1 (KNOTTED1-like homeobox gene 3)

HSP 1 Score: 126.7 bits (317), Expect = 3.3e-29
Identity = 87/282 (30.85%), Postives = 137/282 (48.58%), Query Frame = 0 

Query: 108 KAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASA------LTMSGTSCTGCIGE 167
           KA+I+ HP Y +LL+A+V C ++  P D + R++   A +       +  G +  G +G+
Sbjct: 160 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQGLVGD 219

Query: 168 DPALDQFMEAYCEMLTKYEQELSKPFR----DAMLFLHRIECQFKALSISSSDAGYHLDV 227
           D  LDQFM  Y  +L  ++++L +  R    +A++    IE   ++L+  S   G    +
Sbjct: 220 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATM 279

Query: 228 CVNCDVELQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNG 287
             + D +++     + N  D  +                   D+L  + P+     ER  
Sbjct: 280 SDDEDEQVES----DANMFDGGL-------------------DVL-GFGPLIPTESER-- 339

Query: 288 SSEEEVDINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLD 347
           S  E V             +ELK +L + Y   +  +++E ++KR+ GKLP +    L  
Sbjct: 340 SLMERV------------RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKA 399

Query: 348 WWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHW 380
           WW  H KWPYP+E  K  L Q TGL  KQINNWFINQRKR+W
Sbjct: 400 WWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 403

[Close]
BLAST of Carg07859 vs. Swiss-Prot
Match: sp|P46608|HSBH1_SOYBN (Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 5.6e-111
Identity = 210/312 (67.31%), Postives = 232/312 (74.36%), Query Frame = 0 

Query: 108 KAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSG---TSCTGCIGEDPA 167
           KAKIM HPHYHRLLAAYVNC+KVGAPP+VVARLE ACASA TM+G    + + CIGEDPA
Sbjct: 125 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGEDPA 184

Query: 168 LDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDVE 227
           LDQFMEAYCEMLTKYEQELSKP ++AMLFL RIECQFK L+ISSSD              
Sbjct: 185 LDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISSSD-------------- 244

Query: 228 LQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEVD 287
                         + +N G                             +RNGSSEE+VD
Sbjct: 245 --------------FASNEG----------------------------GDRNGSSEEDVD 304

Query: 288 INGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK 347
           ++ + IDPQAEDR+LKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLL+WW+RHYK
Sbjct: 305 LH-NMIDPQAEDRDLKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWNRHYK 364

Query: 348 WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVLG 407
           WPYPSESQKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HP YYMD VLG
Sbjct: 365 WPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPSHPHYYMDNVLG 379

Query: 408 NPFPLDISPTLL 417
           NPFP+D+S  +L
Sbjct: 425 NPFPMDLSHPML 379

[Close]
BLAST of Carg07859 vs. Swiss-Prot
Match: sp|O22299|LET6_SOLLC (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=2 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 4.0e-109
Identity = 201/312 (64.42%), Postives = 227/312 (72.76%), Query Frame = 0 

Query: 108 KAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTM---SGTSCTGCIGEDPA 167
           K+KIM HPHYHRLL AY+NC+K+GAPP+VVARLE  CA++ TM   S +S  G IGEDPA
Sbjct: 97  KSKIMAHPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPA 156

Query: 168 LDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDVE 227
           LDQFMEAYCEMLTKYEQELSKPF++AM+FL RIECQFKAL+++ +               
Sbjct: 157 LDQFMEAYCEMLTKYEQELSKPFKEAMVFLSRIECQFKALTLAPNS-------------- 216

Query: 228 LQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEVD 287
                                                  ++    GEA +RNGSS+EEVD
Sbjct: 217 ---------------------------------------SHESALGEAMDRNGSSDEEVD 276

Query: 288 INGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK 347
           +N   IDPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQL+DWW RH K
Sbjct: 277 VNNSFIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIK 336

Query: 348 WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVLG 407
           WPYPSESQKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HP YYMD VL 
Sbjct: 337 WPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMDNVLA 355

Query: 408 NPFPLDISPTLL 417
           N FP+D++P+LL
Sbjct: 397 NHFPMDMTPSLL 355

[Close]
BLAST of Carg07859 vs. Swiss-Prot
Match: sp|Q38874|STM_ARATH (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 SV=2)

HSP 1 Score: 386.7 bits (992), Expect = 3.2e-106
Identity = 203/312 (65.06%), Postives = 222/312 (71.15%), Query Frame = 0 

Query: 108 KAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGT-SCTGCIGEDPALD 167
           KAKIM HPHYHRLLAAYVNC+KVGAPP+VVARLE AC        +   TGC+GEDP LD
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACXXXXXXXXSMGPTGCLGEDPGLD 181

Query: 168 QFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDVELQ 227
           QFMEAYCEML KYEQELSKPF++AM+FL R+ECQFK+LS+SS  +               
Sbjct: 182 QFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSS--------------- 241

Query: 228 ESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEVDIN 287
                         + +G    D                          NGSSEEEVD+N
Sbjct: 242 -------------FSGYGETAIDR-----------------------NNNGSSEEEVDMN 301

Query: 288 GHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP 347
              +DPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP
Sbjct: 302 NEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP 361

Query: 348 YPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHP-QYYMDTVLGN 407
           YPSE QKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HP  Y+MD VLGN
Sbjct: 362 YPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHHYFMDNVLGN 382

Query: 408 PFPLD-ISPTLL 417
           PFP+D IS T+L
Sbjct: 422 PFPMDHISSTML 382

[Close]
BLAST of Carg07859 vs. Swiss-Prot
Match: sp|Q9M6D9|STM_BRAOL (Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 3.9e-104
Identity = 205/317 (64.67%), Postives = 224/317 (70.66%), Query Frame = 0 

Query: 107 LKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGT-SCTGCIGEDPAL 166
           +KAKIM HPHYHRLL AYVNC+KVGAPP+V ARLE  C+SA   + +   TG +GEDP L
Sbjct: 123 VKAKIMAHPHYHRLLLAYVNCQKVGAPPEVQARLEETCSSAAAAAASMGPTGSLGEDPGL 182

Query: 167 DQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISS-SDAGYHLDVCVNCDVE 226
           DQFMEAYCEML KYEQELSKPF++AM+FL  +ECQFK+LS+SS S  GY           
Sbjct: 183 DQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGY----------- 242

Query: 227 LQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGE-AFER--NGSSEE 286
                                                        GE A ER  NGSSEE
Sbjct: 243 ---------------------------------------------GEAAIERNNNGSSEE 302

Query: 287 EVDINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSR 346
           EVD+N   +DPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSR
Sbjct: 303 EVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSR 362

Query: 347 HYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHP-QYYMD 406
           HYKWPYPSE QKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HP  Y+M 
Sbjct: 363 HYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPLHYFMG 383

Query: 407 TVLGNPFPLD-ISPTLL 417
            VLGNPFP+D IS T+L
Sbjct: 423 NVLGNPFPIDHISGTML 383

[Close]
BLAST of Carg07859 vs. Swiss-Prot
Match: sp|Q41853|RSH1_MAIZE (Homeobox protein rough sheath 1 OS=Zea mays OX=4577 GN=RS1 PE=2 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.1e-71
Identity = 152/309 (49.19%), Postives = 187/309 (60.52%), Query Frame = 0 

Query: 107 LKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGTSCTGCIGEDPALD 166
           +KAKI+ HP Y  LLAAY++C+KVGAPPDV+ RL    A A  +  ++       DP LD
Sbjct: 90  IKAKIVAHPQYSALLAAYLDCQKVGAPPDVLERL---TAMAAKLDASAAGRHEPRDPELD 149

Query: 167 QFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDVELQ 226
           QFMEAYC ML KY +EL++P  +AM FL R+E Q   +S     +   L           
Sbjct: 150 QFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGGSSSARLS---------- 209

Query: 227 ESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEVDIN 286
                                          +AD         G++ E  GSSE+++D N
Sbjct: 210 -------------------------------LAD---------GKS-EGVGSSEDDMDPN 269

Query: 287 GH-----SIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSR 346
           G       IDP+AED+ELK QLL+KYSG L SL+QEF KK+KKGKLPKEARQ+LL WW  
Sbjct: 270 GRENDPPEIDPRAEDKELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWEL 329

Query: 347 HYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDT 406
           HYKWPYPSE++K+ALA+STGLDQKQINNWFINQRKRHWKPSEDM FV+M+G HPQ     
Sbjct: 330 HYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAAL 344

Query: 407 VLGNPFPLD 411
            +  PF  D
Sbjct: 390 YMDGPFMRD 344

[Close]
BLAST of Carg07859 vs. TrEMBL
Match: tr|A0A0A0KJU4|A0A0A0KJU4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513430 PE=3 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.3e-125
Identity = 238/312 (76.28%), Postives = 244/312 (78.21%), Query Frame = 0 

Query: 106 ELKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTM-SGTSCTGCIGEDPA 165
           E+KAKIM HPHYHRLLAAYVNCRKVGAPP+VVARLE ACASA+TM SG +  GCIGEDPA
Sbjct: 94  EVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPA 153

Query: 166 LDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDVE 225
           LDQFMEAYCEMLTKYEQELSKPFRDAMLFL RI+ QFKALSISSS    HL         
Sbjct: 154 LDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSS----HLP-------- 213

Query: 226 LQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEVD 285
                                                     P CGEAF+RNGSSEEEVD
Sbjct: 214 ------------------------------------------PACGEAFDRNGSSEEEVD 273

Query: 286 INGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK 345
           INGHSIDPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK
Sbjct: 274 INGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK 333

Query: 346 WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVLG 405
           WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HPQYYMDTVLG
Sbjct: 334 WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLG 351

Query: 406 NPFPLDISPTLL 417
           NPFPLDISP LL
Sbjct: 394 NPFPLDISPALL 351

[Close]
BLAST of Carg07859 vs. TrEMBL
Match: tr|A0A1S3B0X4|A0A1S3B0X4_CUCME (homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103484637 PE=3 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 2.5e-124
Identity = 236/312 (75.64%), Postives = 242/312 (77.56%), Query Frame = 0 

Query: 106 ELKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTM-SGTSCTGCIGEDPA 165
           E+KAKIM HPHYHRLL AYVNCRKVGAPP+VVARLE ACASA+TM SG +  GCIGEDPA
Sbjct: 99  EVKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPA 158

Query: 166 LDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDVE 225
           LDQFMEAYCEMLTKYEQELSKPFRDAMLFL RI+ QFKALSISSS    HL         
Sbjct: 159 LDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSS----HLP-------- 218

Query: 226 LQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEVD 285
                                                     P CGEAF+RNGSSEEEVD
Sbjct: 219 ------------------------------------------PACGEAFDRNGSSEEEVD 278

Query: 286 INGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK 345
           INGHSIDPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK
Sbjct: 279 INGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK 338

Query: 346 WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVLG 405
           WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HPQYYMD VLG
Sbjct: 339 WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLG 356

Query: 406 NPFPLDISPTLL 417
           NPFPLDISP LL
Sbjct: 399 NPFPLDISPALL 356

[Close]
BLAST of Carg07859 vs. TrEMBL
Match: tr|A0A067JMJ4|A0A067JMJ4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21170 PE=3 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 6.7e-117
Identity = 215/313 (68.69%), Postives = 237/313 (75.72%), Query Frame = 0 

Query: 104 SCELKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGTSCTGCIGEDP 163
           +  +KAKIM HPHYHRLLAAY+NC+KVGAPP+VVARLE ACASA  M G + T C+GEDP
Sbjct: 107 AASVKAKIMAHPHYHRLLAAYINCQKVGAPPEVVARLEEACASAAAM-GPTGTSCVGEDP 166

Query: 164 ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDV 223
           ALDQFMEAYCEMLTKYEQELSKPF++AMLFL R+ECQFKAL++SS ++            
Sbjct: 167 ALDQFMEAYCEMLTKYEQELSKPFKEAMLFLQRVECQFKALTVSSPNS------------ 226

Query: 224 ELQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEV 283
                                                        CGEA ERNGSSEEEV
Sbjct: 227 --------------------------------------------ACGEAGERNGSSEEEV 286

Query: 284 DINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY 343
           D+N + IDPQAED+ELKGQLLR+YSGCLG+LKQEFMKKRKKGKLPKEARQQLLDWWSRHY
Sbjct: 287 DVNNNFIDPQAEDQELKGQLLRRYSGCLGNLKQEFMKKRKKGKLPKEARQQLLDWWSRHY 346

Query: 344 KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVL 403
           KWPYPSESQKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HP YY+D VL
Sbjct: 347 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHYYVDNVL 362

Query: 404 GNPFPLDISPTLL 417
           GNPFP+DISPTLL
Sbjct: 407 GNPFPMDISPTLL 362

[Close]
BLAST of Carg07859 vs. TrEMBL
Match: tr|A0A1U8JSR3|A0A1U8JSR3_GOSHI (homeobox protein SBH1-like OS=Gossypium hirsutum OX=3635 GN=LOC107910050 PE=3 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 6.7e-117
Identity = 217/313 (69.33%), Postives = 235/313 (75.08%), Query Frame = 0 

Query: 104 SCELKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGTSCTGCIGEDP 163
           S  +KAKIM HPHYHRLLAAYVNC+KVGAPP+VVARLE ACASA TM G + TGCIGEDP
Sbjct: 102 SSSVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATM-GPTRTGCIGEDP 161

Query: 164 ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDV 223
           ALDQFMEAYCEMLTKYEQEL+KPF++AMLFL R+ECQFKAL++SS               
Sbjct: 162 ALDQFMEAYCEMLTKYEQELTKPFKEAMLFLQRVECQFKALTVSSP-------------- 221

Query: 224 ELQESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEV 283
                                                     +P CGE  +RN SSEE+V
Sbjct: 222 ------------------------------------------NPACGEGVDRNASSEEDV 281

Query: 284 DINGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY 343
           D+N + IDP AEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY
Sbjct: 282 DVNNNFIDPLAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY 341

Query: 344 KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVL 403
           KWPYPSESQKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HP YYMD VL
Sbjct: 342 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMDNVL 357

Query: 404 GNPFPLDISPTLL 417
           GNPFP+D+SPTLL
Sbjct: 402 GNPFPMDLSPTLL 357

[Close]
BLAST of Carg07859 vs. TrEMBL
Match: tr|A0A061GI15|A0A061GI15_THECC (KNOX/ELK homeobox transcription factor isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_030302 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.1e-116
Identity = 217/310 (70.00%), Postives = 234/310 (75.48%), Query Frame = 0 

Query: 107 LKAKIMGHPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGTSCTGCIGEDPALD 166
           +KAKIM HPHYHRLLAAYVNC+KVGAPP+VVARLE ACASA TM G S TGC+GEDPALD
Sbjct: 104 VKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATM-GPSGTGCLGEDPALD 163

Query: 167 QFMEAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAGYHLDVCVNCDVELQ 226
           QFMEAYCEMLTKYEQELSKPF++AMLFL R+ECQFKAL++SS  +               
Sbjct: 164 QFMEAYCEMLTKYEQELSKPFKEAMLFLQRVECQFKALTVSSPSS--------------- 223

Query: 227 ESICLNCNRTDQWVNNHGVLIYDNMYVRVHLMADILYAYHPVCGEAFERNGSSEEEVDIN 286
                                                     CGEA +RNGSSEEEVD+N
Sbjct: 224 -----------------------------------------ACGEAADRNGSSEEEVDVN 283

Query: 287 GHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP 346
            + IDP AEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWW RHYKWP
Sbjct: 284 NNFIDPLAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWGRHYKWP 343

Query: 347 YPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVLGNP 406
           YPSESQK+ALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HP YYMD VLGNP
Sbjct: 344 YPSESQKIALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHYYMDNVLGNP 356

Query: 407 FPLDISPTLL 417
           FP+D+SPTLL
Sbjct: 404 FPMDLSPTLL 356

The following BLAST results are available for this feature:
BLAST of Carg07859 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023518637.11.3e-14082.11homeobox protein knotted-1-like LET6 [Cucurbita pepo subsp. pepo][more]
XP_022926891.13.8e-14081.79homeobox protein knotted-1-like LET6 [Cucurbita moschata][more]
XP_023003991.18.5e-14081.47homeobox protein knotted-1-like LET6 [Cucurbita maxima][more]
XP_004134981.23.5e-12576.28PREDICTED: homeobox protein knotted-1-like LET6 [Cucumis sativus] >KGN49079.1 hy... [more]
XP_022132524.13.5e-12576.13homeobox protein SBH1 [Momordica charantia][more]
BLAST of Carg07859 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G62360.11.8e-10765.06KNOX/ELK homeobox transcription factor[more]
AT4G08150.19.2e-7251.00KNOTTED-like from Arabidopsis thaliana[more]
AT1G23380.25.8e-5842.09KNOTTED1-like homeobox gene 6[more]
AT1G70510.12.1e-5238.31KNOTTED-like from Arabidopsis thaliana 2[more]
AT5G25220.13.3e-2930.85KNOTTED1-like homeobox gene 3[more]
BLAST of Carg07859 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P46608|HSBH1_SOYBN5.6e-11167.31Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1[more]
sp|O22299|LET6_SOLLC4.0e-10964.42Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=... [more]
sp|Q38874|STM_ARATH3.2e-10665.06Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 ... [more]
sp|Q9M6D9|STM_BRAOL3.9e-10464.67Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=... [more]
sp|Q41853|RSH1_MAIZE1.1e-7149.19Homeobox protein rough sheath 1 OS=Zea mays OX=4577 GN=RS1 PE=2 SV=1[more]
BLAST of Carg07859 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KJU4|A0A0A0KJU4_CUCSA2.3e-12576.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513430 PE=3 SV=1[more]
tr|A0A1S3B0X4|A0A1S3B0X4_CUCME2.5e-12475.64homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103484637 PE=... [more]
tr|A0A067JMJ4|A0A067JMJ4_JATCU6.7e-11768.69Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21170 PE=3 SV=1[more]
tr|A0A1U8JSR3|A0A1U8JSR3_GOSHI6.7e-11769.33homeobox protein SBH1-like OS=Gossypium hirsutum OX=3635 GN=LOC107910050 PE=3 SV... [more]
tr|A0A061GI15|A0A061GI15_THECC1.1e-11670.00KNOX/ELK homeobox transcription factor isoform 1 OS=Theobroma cacao OX=3641 GN=T... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017970Homeobox_CS
IPR008422Homeobox_KN_domain
IPR005541KNOX2
IPR001356Homeobox_dom
IPR005540KNOX1
IPR005539ELK_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07859-RACarg07859-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005539ELK domainSMARTSM01188ELK_2coord: 298..319
e-value: 2.6E-8
score: 43.6
IPR005539ELK domainPFAMPF03789ELKcoord: 298..319
e-value: 8.5E-11
score: 41.5
IPR005539ELK domainPROSITEPS51213ELKcoord: 298..318
score: 10.633
IPR005540KNOX1SMARTSM01255KNOX1_2coord: 105..149
e-value: 1.3E-17
score: 74.5
IPR005540KNOX1PFAMPF03790KNOX1coord: 107..145
e-value: 1.6E-20
score: 72.5
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 320..385
e-value: 7.7E-13
score: 58.7
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 318..381
score: 13.005
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 330..382
e-value: 2.14666E-12
score: 61.1052
IPR005541KNOX2SMARTSM01256KNOX2_2coord: 155..206
e-value: 5.7E-24
score: 95.6
IPR005541KNOX2PFAMPF03791KNOX2coord: 158..204
e-value: 4.3E-20
score: 71.0
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 338..377
e-value: 8.1E-17
score: 60.7
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 316..387
e-value: 2.3E-21
score: 77.1
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 271..416
NoneNo IPR availablePANTHERPTHR11850:SF100HOMEOBOX PROTEIN SHOOT MERISTEMLESScoord: 271..416
NoneNo IPR availablePANTHERPTHR11850:SF100HOMEOBOX PROTEIN SHOOT MERISTEMLESScoord: 7..222
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 7..222
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 356..379
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 320..395

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg07859Cla014424Watermelon (97103) v1carwmB0642
Carg07859Csa6G513430Cucumber (Chinese Long) v2carcuB0663
Carg07859Csa7G041370Cucumber (Chinese Long) v2carcuB0664
Carg07859MELO3C007417Melon (DHL92) v3.5.1carmeB0642
Carg07859MELO3C018844Melon (DHL92) v3.5.1carmeB0640
Carg07859ClCG01G021690Watermelon (Charleston Gray)carwcgB0623
Carg07859ClCG02G002200Watermelon (Charleston Gray)carwcgB0624
Carg07859CSPI06G33270Wild cucumber (PI 183967)carcpiB0672
Carg07859CSPI07G03420Wild cucumber (PI 183967)carcpiB0673
Carg07859Cucsa.148830Cucumber (Gy14) v1carcgyB0717
Carg07859Cucsa.044950Cucumber (Gy14) v1carcgyB0714
Carg07859CmaCh07G003290Cucurbita maxima (Rimu)carcmaB0914
Carg07859CmaCh03G005530Cucurbita maxima (Rimu)carcmaB0912
Carg07859CmoCh07G003200Cucurbita moschata (Rifu)carcmoB0888
Carg07859CmoCh03G005800Cucurbita moschata (Rifu)carcmoB0886
Carg07859Lsi11G014220Bottle gourd (USVL1VR-Ls)carlsiB584
Carg07859Lsi01G004560Bottle gourd (USVL1VR-Ls)carlsiB585
Carg07859Cp4.1LG19g07900Cucurbita pepo (Zucchini)carcpeB0915
Carg07859CsGy6G032820Cucumber (Gy14) v2carcgybB0640
Carg07859CsGy7G003090Cucumber (Gy14) v2carcgybB0641
Carg07859MELO3C018844.2Melon (DHL92) v3.6.1carmedB0650
Carg07859MELO3C007417.2Melon (DHL92) v3.6.1carmedB0652
Carg07859CsaV3_6G048730Cucumber (Chinese Long) v3carcucB0674
Carg07859CsaV3_7G003300Cucumber (Chinese Long) v3carcucB0675
Carg07859Cla97C01G021290Watermelon (97103) v2carwmbB0669
Carg07859Bhi03G000473Wax gourdcarwgoB0759
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg07859Carg13675Silver-seed gourdcarcarB563
The following block(s) are covering this gene:
GeneOrganismBlock
Carg07859Cucurbita pepo (Zucchini)carcpeB0913