Carg13605 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCAGGGCCGTTCATTTATCCGACTTTTTAATCCCAATCCAAGCCCTAGGATGGTTTGACTATCCCGATTCCGTGTAATCGAACGGTCTATGTTGTTGAACAATACGGCTGCAAGTGGTACGGAAAGCACAGGATTATGGGTTGCTTCGTCCGTGTCCGATTCTTCAACCTTCATTGAAGCAGGGAAGCGGACTGAAAGCGAGTTGTTTCTCCAGGCAACCATTTTTCACATCCAATCCATTCAGCTCATATGAAATTTCTTCATTCATTTCGATTTCATCAATCCCGGCTTTAGTATCAAGGAATTCCTTATCGTATTTTTCTGATCTCGATTTTGATCTCACGATCTCTCGAATCGCGTTATTTTTTCTCCATGGAGGAGCAGCAGAAGACGGCGAAAGATCAAGAACTCAAGGAGGATCATGAAGAGAATGACGCAATTGAGCTTGTTCTCTTTCAAGTTTCTGAATGTTATGTCTATTTGGTGAGTAAATTAGCCCTGCTTATCTCACAGAAATCTAAGTTTTTAGTTCTGATGCAGAAATCTAAGCTTTCTTGTGGCCTTCTTTTGCGATTACTCGAATGTGAAGTAGTTGTTAGCACCATAGTTGATTATATCCTCTTCGAAATCGCTGATATCGTGTTTGGCCTATTTTGTGCATTTGTCTTATCAATAGCTTCCCTTTGTGAAGGGTTCTTCATGTGCTTACGTACTATGCCTACTTCTGTAAAATCATGCAATTGAGATATCTTAGAAATGGAGATGTAGGTTGTCACTATTTGATATCTATCCACATTTTCCCTCGTAGTGGGATTATGTTTATATGAATAACGATAGAAAATTAGTGTTCTGTATCTGCTGGTTCTTCACTGCCGTGTAGTAAAACTGCATGATATTTTCCTGTGTACGATAATATTAGCCTTTTCTGGATATTTTATCTCTTCAATTCAATTGATTTTTCTTCATCTTGTTCTTAATCTCATTTTTATGATCTTTTTGCAGATACCCCCAAGAAAAAGTGCAGCTTCCTACAGGTTTTAACTGTAACTTCGATGGATTATGCATATAACTGTGAATTGTTATATGATCTTGATATCGTACAGAAACTTTATTGTCGACAGATATTATGTCCCCTAGATCAAATTGATGATTTCATTGTTTACTTATAATTCCAATTTAATTTAGTATTACGAAAAGTATAACTACAGGAAAGAATTTGATAGTACATATAAGCTAGATGCCTGAGATTTAGCTAGAATAGATCTAAAATCTCCCCCCAAGACATGCATATCTTTGAGTCTGATGTTCCTTTCAATATTCTTATGTAAGATCTTTTATCGAATTGGCCCACAAAGTCTTGGCCTTTTTTTCAAAGCTCTGCCCACGCAGTAGCTGTTCAATATTATGTTTTGTAGGGCCTGTTAGCAACCAACAGACATTGAATAATGGGAACACAAAGGACCACACTTTAAGAGCTATCAGCACCCAAGAATCACTAAACTATTCTCACTCTCAGTCATTATGATCTTGCCTATAATATTTAATGACTAAAAATAAATATTTGTCTGTACAGATTTATGCCTAGCTGTGAAGAATAGATAATGTATCCTTGTATGATGGTTAATGAGTAAACACTATATTAGATGTTTATTGTTGTAAAAATTCACTATCTATGCTTGCCATTTACGACTTAGTTTTGAAAATCCACTATATATACTCTGCCAACTTAGTTTTCCACATGTGCTTTGACTACCTTAAGGGCTGATGAATGGGATGTGAATAAATGGGCCTGGGAGGGAAAACTGAAAGTCCTTAGCAAGGGAGAAGAATGCATTATTAGACTTGAAGATAAGAGCACAGGTGAGATTATCTCTTAGTTGCTACAAAAGAAGTATTGTGGATCTGTGGTGTTTAAATGGTAGGTGAAGTATATTATTGCAGATGAGGCATATATGGTGTGTTGCTGGCTAATTAGCTGTTTATCATTATAATAGGTGAATTATATGCTCGGGCATTCTTGAGAGATGGAGAACCGCATCCAGTTGAACCTGTAATTGATAGCAGCAGGTTGATTTCATTTTTAATTGAACTCTAACTCTAATCTTACCAGTATTCTTTGTTGGCCCAAACTTTTGTGTCTAAATTGTAAGTTTGGCTGATCTTCCTTGTCCAAGTAGTTAACAGTCTGTGTCTAAGTTAGAAGTTCAGCTCAGATGAATATATTTTAACATCTTTACCTTGTTTTAACACTTCATTTGAAAATGTCTGATGTGATGTTCTATTATTGCAGATATTTTGTTCTTCGCATAGAAGAAAATATCGGTGAGCTTTGGGGGCTCTCGCCTACCATTCTACACCCTGAATTGACTTCTAATATATCTCATTATGATGTGATATTTATTTGTGAGACATGCGACCAACTGACACTTAGAGGCTGTAGAATAGAAACAATTTGGCTGTAGAATAGAAACAATTTGAGTTGAACAGTTAATAATTATGAATGAATACTATGTAGATGGTCGCCGTCGGCATGCCTTTATTGGCATAGGATTTCGAGAAAGAACCGAGGCATATGACTTCCAAGCAGCTTTGCATGATCATATGAAGTAAATGTCCTTCTACTCTACAAATATTCTATTTGCATGTACTTGTTCATCCAAAAAATAGAATTTTCAATGCGCTTTTCGTTATTTATTATTATTATTTTTTTTTTTTGAAAAAGGTATCTGAATAAAAAGAAGAGTGCAGAAGAGATGGAACAACAGTTCCAGAAAACATCCTTAGTTGATTATAGTTTGAAAGAAGGGGAGACTATTGTACTACAGTTAAAAAGCAAAGTAAGCTGATTTTCATTTCATTTCATTGATTTCTGCATCAACTTGTTCATTGCTCCATTATAATAGATCTCATCTCATCTTTACTTCACACAATTTTTGTGACCAACAGAAAAGCTTTAGCAGCATCAAGAAATCTTCTGAGCTTGATCTGAAAGTCTCCTCCTCATCAGAAGAAGAAGAAGGCAACACAAAAAAAGAGTCCATTTTTTGTATCAAACCACCCCCACCTCCACCAGCACCACTTTCACCTGTTCCAGCTCAGGAGTCTCCTACAAGTTTTCCGCCAAACATCAATCTGGAAGAAACTTCTAAGCACAAGGAAGACTCCAATCTTAACTGTCTGATAGAGGACTGA TCAGGGCCGTTCATTTATCCGACTTTTTAATCCCAATCCAAGCCCTAGGATGGTTTGACTATCCCGATTCCGTGTAATCGAACGGTCTATGTTGTTGAACAATACGGCTGCAAGTGGTACGGAAAGCACAGGATTATGGGTTGCTTCGTCCGTGTCCGATTCTTCAACCTTCATTGAAGCAGGGAAGCGGACTGAAAGCGAGTTGTTTCTCCAGGCAACCATTTTTCACATCCAATCCATTCAGCTCATATGAAATTTCTTCATTCATTTCGATTTCATCAATCCCGGCTTTAGTATCAAGGAATTCCTTATCGTATTTTTCTGATCTCGATTTTGATCTCACGATCTCTCGAATCGCGTTATTTTTTCTCCATGGAGGAGCAGCAGAAGACGGCGAAAGATCAAGAACTCAAGGAGGATCATGAAGAGAATGACGCAATTGAGCTTGTTCTCTTTCAAGTTTCTGAATGTTATGTCTATTTGATACCCCCAAGAAAAAGTGCAGCTTCCTACAGGGCTGATGAATGGGATGTGAATAAATGGGCCTGGGAGGGAAAACTGAAAGTCCTTAGCAAGGGAGAAGAATGCATTATTAGACTTGAAGATAAGAGCACAGGTGAATTATATGCTCGGGCATTCTTGAGAGATGGAGAACCGCATCCAGTTGAACCTGTAATTGATAGCAGCAGATATTTTGTTCTTCGCATAGAAGAAAATATCGATGGTCGCCGTCGGCATGCCTTTATTGGCATAGGATTTCGAGAAAGAACCGAGGCATATGACTTCCAAGCAGCTTTGCATGATCATATGAAGTATCTGAATAAAAAGAAGAGTGCAGAAGAGATGGAACAACAGTTCCAGAAAACATCCTTAGTTGATTATAGTTTGAAAGAAGGGGAGACTATTGTACTACAGTTAAAAAGCAAAAAAAGCTTTAGCAGCATCAAGAAATCTTCTGAGCTTGATCTGAAAGTCTCCTCCTCATCAGAAGAAGAAGAAGGCAACACAAAAAAAGAGTCCATTTTTTGTATCAAACCACCCCCACCTCCACCAGCACCACTTTCACCTGTTCCAGCTCAGGAGTCTCCTACAAGTTTTCCGCCAAACATCAATCTGGAAGAAACTTCTAAGCACAAGGAAGACTCCAATCTTAACTGTCTGATAGAGGACTGA ATGGAGGAGCAGCAGAAGACGGCGAAAGATCAAGAACTCAAGGAGGATCATGAAGAGAATGACGCAATTGAGCTTGTTCTCTTTCAAGTTTCTGAATGTTATGTCTATTTGATACCCCCAAGAAAAAGTGCAGCTTCCTACAGGGCTGATGAATGGGATGTGAATAAATGGGCCTGGGAGGGAAAACTGAAAGTCCTTAGCAAGGGAGAAGAATGCATTATTAGACTTGAAGATAAGAGCACAGGTGAATTATATGCTCGGGCATTCTTGAGAGATGGAGAACCGCATCCAGTTGAACCTGTAATTGATAGCAGCAGATATTTTGTTCTTCGCATAGAAGAAAATATCGATGGTCGCCGTCGGCATGCCTTTATTGGCATAGGATTTCGAGAAAGAACCGAGGCATATGACTTCCAAGCAGCTTTGCATGATCATATGAAGTATCTGAATAAAAAGAAGAGTGCAGAAGAGATGGAACAACAGTTCCAGAAAACATCCTTAGTTGATTATAGTTTGAAAGAAGGGGAGACTATTGTACTACAGTTAAAAAGCAAAAAAAGCTTTAGCAGCATCAAGAAATCTTCTGAGCTTGATCTGAAAGTCTCCTCCTCATCAGAAGAAGAAGAAGGCAACACAAAAAAAGAGTCCATTTTTTGTATCAAACCACCCCCACCTCCACCAGCACCACTTTCACCTGTTCCAGCTCAGGAGTCTCCTACAAGTTTTCCGCCAAACATCAATCTGGAAGAAACTTCTAAGCACAAGGAAGACTCCAATCTTAACTGTCTGATAGAGGACTGA MEEQQKTAKDQELKEDHEENDAIELVLFQVSECYVYLIPPRKSAASYRADEWDVNKWAWEGKLKVLSKGEECIIRLEDKSTGELYARAFLRDGEPHPVEPVIDSSRYFVLRIEENIDGRRRHAFIGIGFRERTEAYDFQAALHDHMKYLNKKKSAEEMEQQFQKTSLVDYSLKEGETIVLQLKSKKSFSSIKKSSELDLKVSSSSEEEEGNTKKESIFCIKPPPPPPAPLSPVPAQESPTSFPPNINLEETSKHKEDSNLNCLIED
BLAST of Carg13605 vs. NCBI nr
Match: XP_022947234.1 (uncharacterized protein At1g03900 [Cucurbita moschata]) HSP 1 Score: 446.8 bits (1148), Expect = 5.1e-122 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of Carg13605 vs. NCBI nr
Match: XP_023534216.1 (uncharacterized protein At1g03900 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 444.9 bits (1143), Expect = 1.9e-121 Identity = 257/259 (99.23%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of Carg13605 vs. NCBI nr
Match: XP_022970894.1 (uncharacterized protein At1g03900 [Cucurbita maxima]) HSP 1 Score: 444.5 bits (1142), Expect = 2.5e-121 Identity = 256/259 (98.84%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of Carg13605 vs. NCBI nr
Match: XP_022149778.1 (uncharacterized protein At1g03900 [Momordica charantia]) HSP 1 Score: 394.8 bits (1013), Expect = 2.3e-106 Identity = 215/265 (81.13%), Postives = 225/265 (84.91%), Query Frame = 0
BLAST of Carg13605 vs. NCBI nr
Match: XP_008456431.1 (PREDICTED: uncharacterized protein At1g03900 isoform X2 [Cucumis melo]) HSP 1 Score: 376.7 bits (966), Expect = 6.5e-101 Identity = 221/255 (86.67%), Postives = 236/255 (92.55%), Query Frame = 0
BLAST of Carg13605 vs. TAIR10
Match: AT3G58600.1 (Adaptin ear-binding coat-associated protein 1 NECAP-1) HSP 1 Score: 304.3 bits (778), Expect = 7.4e-83 Identity = 152/199 (76.38%), Postives = 172/199 (86.43%), Query Frame = 0
BLAST of Carg13605 vs. TAIR10
Match: AT1G03900.1 (non-intrinsic ABC protein 4) HSP 1 Score: 141.7 bits (356), Expect = 6.3e-34 Identity = 77/170 (45.29%), Postives = 105/170 (61.76%), Query Frame = 0
BLAST of Carg13605 vs. Swiss-Prot
Match: sp|Q681Q7|Y1390_ARATH (Uncharacterized protein At1g03900 OS=Arabidopsis thaliana OX=3702 GN=At1g03900 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.1e-32 Identity = 77/170 (45.29%), Postives = 105/170 (61.76%), Query Frame = 0
BLAST of Carg13605 vs. Swiss-Prot
Match: sp|Q5E9Q4|NECP2_BOVIN (Adaptin ear-binding coat-associated protein 2 OS=Bos taurus OX=9913 GN=NECAP2 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.1e-30 Identity = 72/168 (42.86%), Postives = 104/168 (61.90%), Query Frame = 0
BLAST of Carg13605 vs. Swiss-Prot
Match: sp|Q9NVZ3|NECP2_HUMAN (Adaptin ear-binding coat-associated protein 2 OS=Homo sapiens OX=9606 GN=NECAP2 PE=1 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 9.1e-30 Identity = 70/168 (41.67%), Postives = 103/168 (61.31%), Query Frame = 0
BLAST of Carg13605 vs. Swiss-Prot
Match: sp|Q6P756|NECP2_RAT (Adaptin ear-binding coat-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Necap2 PE=1 SV=2) HSP 1 Score: 131.3 bits (329), Expect = 1.5e-29 Identity = 69/168 (41.07%), Postives = 103/168 (61.31%), Query Frame = 0
BLAST of Carg13605 vs. Swiss-Prot
Match: sp|Q5R630|NECP1_PONAB (Adaptin ear-binding coat-associated protein 1 OS=Pongo abelii OX=9601 GN=NECAP1 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.5e-29 Identity = 68/159 (42.77%), Postives = 97/159 (61.01%), Query Frame = 0
BLAST of Carg13605 vs. TrEMBL
Match: tr|A0A1S3C3X0|A0A1S3C3X0_CUCME (uncharacterized protein At1g03900 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496372 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 4.3e-101 Identity = 221/255 (86.67%), Postives = 236/255 (92.55%), Query Frame = 0
BLAST of Carg13605 vs. TrEMBL
Match: tr|A0A0A0KHL0|A0A0A0KHL0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G239700 PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 6.2e-100 Identity = 199/255 (78.04%), Postives = 217/255 (85.10%), Query Frame = 0
BLAST of Carg13605 vs. TrEMBL
Match: tr|M5XER6|M5XER6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G061900 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.0e-86 Identity = 182/249 (73.09%), Postives = 201/249 (80.72%), Query Frame = 0
BLAST of Carg13605 vs. TrEMBL
Match: tr|W9RYM3|W9RYM3_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004799 PE=4 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 7.3e-85 Identity = 181/254 (71.26%), Postives = 198/254 (77.95%), Query Frame = 0
BLAST of Carg13605 vs. TrEMBL
Match: tr|A0A2P4I6G0|A0A2P4I6G0_QUESU (Adaptin ear-binding coat-associated protein 2 OS=Quercus suber OX=58331 GN=CFP56_08475 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 4.8e-84 Identity = 181/253 (71.54%), Postives = 203/253 (80.24%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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