Carg13470 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13470
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	homeobox-leucine zipper protein HOX11-like
Location	Cucurbita_argyrosperma_scaffold_049 : 635951 .. 637250 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTTGGCTTGAGCTTAGGCGACACTCCCAAGCCCTTTCGTTTCGTCGACAAGCAACGGCAACCTCAGCGCGGCCTTTCCCGTCCAGATTTAGGGTTCTGCGTCGACTTATCGATCGGCCGTACTATCGCCGGAGATAAAGAAGGCGACGAAGAAAAACCTAATCAGAGAGAAGAGGAATCCGATGGCAATGAAGATCCACCGATCCAACTCGATCTTCTCCCTCGCAATCCTGTTCAACGGAACCTAACGAATCCTTACCAAGGATTTCCATGGCCGTCGTCTGAAAACGGTAAGGTTTTCGAGATTTCGAAACCCTGACTGTAACTACCTTCCAAATCACGAAATCATTTCCCCTGATTTTTCTAACGGAAATCGATTGTTTTCAGACGAAGTTGAAGACCGATCCGCATCGCCGAATAGCGCAGCGTCGTCGTTTCAAATGGAATTTGGATTGTACGGCGGCGGAGGGAACATTTCTTCACGGATAGATCAAATGAAAAATAGCGTTGTAAACGAAGTAGGTGAATCTGAGCGAGCATCTTCACGAGCGAGCGATGAAGACGAAAATGGCTCCACGAGGAAGAAACTCAGATTGTCGAAAGACCAATCCGCTTACCTCGAAGAAAGCTTCAAAGAACACAACACCTTGAATCCAGTAAGAACACAGCGTTTGATTTCTTAATTTTAACCTCGAATCTTAATTTCTGAAACTGATTCTTGCGATTCGGATTCCGATTTGTACAGAAACAAAAACTGGCGCTGGCTAAGCAACTGAATCTTCGTCCGCGCCAAGTGGAAGTTTGGTTCCAAAACAGAAGAGCCAGGTAATTGGTTGCGTCGTTCGAATCAAATCAGTTATGGAATAGATTCTTTGGGGAAATTTGTTGAAATTTGTAGAAATTTACAGGACAAAATTGAAGCAAACGGAGGTGGATTGTGAGTATTTGAAAAGATGCTGCGAGACATTAACAGATGAGAACAGACGGCTACAAAAGGAGCTTCAAGAATTAAGAGCTCTGAAGACCACTAACTCATTCTACATGCAATTACCAGCCACCACACTCACCATGTGCCCATCATGTGAAAGAGTGACCTCCACCGTCGCCACAGCCATCGCCGGCGGAGGAAAACTACCTGGTTTCGCCATTTCTGGTGGAGCAAGCTCCTCCTCTTTCCCATTTTCTGCAAAAACACAGACCCACCAGTCAACAACTTCATGATAAGGAGATATGGGTTAAGGCGAATCATGATGGTGCTCCCTTTTCTGTACATAAAACCCTTCTTCCCCCCCCCC

mRNA sequence

ATGGAGCTTGGCTTGAGCTTAGGCGACACTCCCAAGCCCTTTCGTTTCGTCGACAAGCAACGGCAACCTCAGCGCGGCCTTTCCCGTCCAGATTTAGGGTTCTGCGTCGACTTATCGATCGGCCGTACTATCGCCGGAGATAAAGAAGGCGACGAAGAAAAACCTAATCAGAGAGAAGAGGAATCCGATGGCAATGAAGATCCACCGATCCAACTCGATCTTCTCCCTCGCAATCCTGTTCAACGGAACCTAACGAATCCTTACCAAGGATTTCCATGGCCGTCGTCTGAAAACGACGAAGTTGAAGACCGATCCGCATCGCCGAATAGCGCAGCGTCGTCGTTTCAAATGGAATTTGGATTGTACGGCGGCGGAGGGAACATTTCTTCACGGATAGATCAAATGAAAAATAGCGTTGTAAACGAAGTAGGTGAATCTGAGCGAGCATCTTCACGAGCGAGCGATGAAGACGAAAATGGCTCCACGAGGAAGAAACTCAGATTGTCGAAAGACCAATCCGCTTACCTCGAAGAAAGCTTCAAAGAACACAACACCTTGAATCCAAAACAAAAACTGGCGCTGGCTAAGCAACTGAATCTTCGTCCGCGCCAAGTGGAAGTTTGGTTCCAAAACAGAAGAGCCAGGACAAAATTGAAGCAAACGGAGGTGGATTGTGAGTATTTGAAAAGATGCTGCGAGACATTAACAGATGAGAACAGACGGCTACAAAAGGAGCTTCAAGAATTAAGAGCTCTGAAGACCACTAACTCATTCTACATGCAATTACCAGCCACCACACTCACCATGTGCCCATCATGTGAAAGAGTGACCTCCACCGTCGCCACAGCCATCGCCGGCGGAGGAAAACTACCTGGTTTCGCCATTTCTGGTGGAGCAAGCTCCTCCTCTTTCCCATTTTCTGCAAAAACACAGACCCACCAGTCAACAACTTCATGATAAGGAGATATGGGTTAAGGCGAATCATGATGGTGCTCCCTTTTCTGTACATAAAACCCTTCTTCCCCCCCCCC

Coding sequence (CDS)

ATGGAGCTTGGCTTGAGCTTAGGCGACACTCCCAAGCCCTTTCGTTTCGTCGACAAGCAACGGCAACCTCAGCGCGGCCTTTCCCGTCCAGATTTAGGGTTCTGCGTCGACTTATCGATCGGCCGTACTATCGCCGGAGATAAAGAAGGCGACGAAGAAAAACCTAATCAGAGAGAAGAGGAATCCGATGGCAATGAAGATCCACCGATCCAACTCGATCTTCTCCCTCGCAATCCTGTTCAACGGAACCTAACGAATCCTTACCAAGGATTTCCATGGCCGTCGTCTGAAAACGACGAAGTTGAAGACCGATCCGCATCGCCGAATAGCGCAGCGTCGTCGTTTCAAATGGAATTTGGATTGTACGGCGGCGGAGGGAACATTTCTTCACGGATAGATCAAATGAAAAATAGCGTTGTAAACGAAGTAGGTGAATCTGAGCGAGCATCTTCACGAGCGAGCGATGAAGACGAAAATGGCTCCACGAGGAAGAAACTCAGATTGTCGAAAGACCAATCCGCTTACCTCGAAGAAAGCTTCAAAGAACACAACACCTTGAATCCAAAACAAAAACTGGCGCTGGCTAAGCAACTGAATCTTCGTCCGCGCCAAGTGGAAGTTTGGTTCCAAAACAGAAGAGCCAGGACAAAATTGAAGCAAACGGAGGTGGATTGTGAGTATTTGAAAAGATGCTGCGAGACATTAACAGATGAGAACAGACGGCTACAAAAGGAGCTTCAAGAATTAAGAGCTCTGAAGACCACTAACTCATTCTACATGCAATTACCAGCCACCACACTCACCATGTGCCCATCATGTGAAAGAGTGACCTCCACCGTCGCCACAGCCATCGCCGGCGGAGGAAAACTACCTGGTTTCGCCATTTCTGGTGGAGCAAGCTCCTCCTCTTTCCCATTTTCTGCAAAAACACAGACCCACCAGTCAACAACTTCATGA

Protein sequence

MELGLSLGDTPKPFRFVDKQRQPQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQREEESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNSAASSFQMEFGLYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVATAIAGGGKLPGFAISGGASSSSFPFSAKTQTHQSTTS

Homology

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BLAST of Carg13470 vs. NCBI nr
Match: XP_023513861.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 604.4 bits (1557), Expect = 2.3e-169
Identity = 314/318 (98.74%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MELGLSLGDTPKPFRFVDKQRQPQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQREE 60
           MELGLSLGDTPKPFRFVDKQRQPQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQREE
Sbjct: 1   MELGLSLGDTPKPFRFVDKQRQPQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQREE 60

Query: 61  ESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNSAASSFQMEFG 120
           ESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNSAASSFQMEFG
Sbjct: 61  ESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNSAASSFQMEFG 120

Query: 121 LYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLEESF 180
           LYGGGGNISSRIDQMKNSV+NEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLEESF
Sbjct: 121 LYGGGGNISSRIDQMKNSVLNEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLEESF 180

Query: 181 KEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENR 240
           KEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLT+ENR
Sbjct: 181 KEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENR 240

Query: 241 RLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVATAIAGGGKLPGFAISGGAS 300
           RLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVATA AGG KLPGFAISGGAS
Sbjct: 241 RLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVATATAGGVKLPGFAISGGAS 300

Query: 301 SSSFPFSAKTQTHQSTTS 319
           SSSFPFSAKTQTHQSTTS
Sbjct: 301 SSSFPFSAKTQTHQSTTS 318

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BLAST of Carg13470 vs. NCBI nr
Match: XP_022959833.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita moschata])

HSP 1 Score: 601.7 bits (1550), Expect = 1.5e-168
Identity = 314/318 (98.74%), Postives = 315/318 (99.06%), Query Frame = 0


Query: 1   MELGLSLGDTPKPFRFVDKQRQPQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQREE 60
           MELGLSLGDTPKPFRFVDKQRQPQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQREE
Sbjct: 1   MELGLSLGDTPKPFRFVDKQRQPQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQREE 60

Query: 61  ESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNSAASSFQMEFG 120
           ESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNS ASSFQMEFG
Sbjct: 61  ESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNSVASSFQMEFG 120

Query: 121 LYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLEESF 180
           LYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLEESF
Sbjct: 121 LYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLEESF 180

Query: 181 KEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENR 240
           KEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENR
Sbjct: 181 KEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENR 240

Query: 241 RLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVATAIAGGGKLPGFAISGGAS 300
           RLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVATA AGGGKLPGFAISGGA 
Sbjct: 241 RLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVATATAGGGKLPGFAISGGA- 300

Query: 301 SSSFPFSAKTQTHQSTTS 319
           SSSFPFSAK+QTHQSTTS
Sbjct: 301 SSSFPFSAKSQTHQSTTS 317

[Close]

BLAST of Carg13470 vs. NCBI nr
Match: XP_023004600.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita maxima])

HSP 1 Score: 594.0 bits (1530), Expect = 3.1e-166
Identity = 310/318 (97.48%), Postives = 314/318 (98.74%), Query Frame = 0


Query: 1   MELGLSLGDTPKPFRFVDKQRQPQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQREE 60
           MELGLSLGDTP+PFRFVDKQ QPQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQREE
Sbjct: 1   MELGLSLGDTPEPFRFVDKQPQPQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQREE 60

Query: 61  ESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNSAASSFQMEFG 120
           ESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNSAASSFQMEFG
Sbjct: 61  ESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNSAASSFQMEFG 120

Query: 121 LYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLEESF 180
           LYGGGGNIS+RIDQMKNSVVNEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLEESF
Sbjct: 121 LYGGGGNISTRIDQMKNSVVNEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLEESF 180

Query: 181 KEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENR 240
           KEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLT+ENR
Sbjct: 181 KEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENR 240

Query: 241 RLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVATAIAGGGKLPGFAISGGAS 300
           RLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTS+VATA  GGGKLPGFAISGGA 
Sbjct: 241 RLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSSVATATDGGGKLPGFAISGGA- 300

Query: 301 SSSFPFSAKTQTHQSTTS 319
           SSSFPFSAKTQTHQSTTS
Sbjct: 301 SSSFPFSAKTQTHQSTTS 317

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BLAST of Carg13470 vs. NCBI nr
Match: XP_008461247.1 (PREDICTED: homeobox-leucine zipper protein HOX11-like [Cucumis melo])

HSP 1 Score: 515.8 bits (1327), Expect = 1.1e-142
Identity = 277/326 (84.97%), Postives = 290/326 (88.96%), Query Frame = 0


Query: 1   MELGLSLGDTPKPFRFVDKQRQ---PQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQ 60
           MELGLSLGD PKPFRFVDKQ Q   PQR LSR DLGFCVDLSIGR++AGDKE DE+KPNQ
Sbjct: 1   MELGLSLGDAPKPFRFVDKQSQVPSPQRRLSRKDLGFCVDLSIGRSVAGDKEDDEDKPNQ 60

Query: 61  REEESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNSAASSFQM 120
            E+ESDGNEDPP+QLDLLP NPV RNLTNPYQGFPWPSSENDE EDR+ASPNSAASSFQM
Sbjct: 61  GEDESDGNEDPPVQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 121 EFGLYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLE 180
           EFGLYG GGNIS R DQM+N V+NEVGESERASSRASDEDENG TRKKLRLSK+QSA+LE
Sbjct: 121 EFGLYGSGGNISCRRDQMENGVMNEVGESERASSRASDEDENGCTRKKLRLSKEQSAFLE 180

Query: 181 ESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTD 240
           ESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLT+
Sbjct: 181 ESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTE 240

Query: 241 ENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVA----TAIAGGGKLPGF 300
           ENRRLQKELQELRALKTTNS YMQLPATTLTMCPSCERVTS+ A     A  G  K  G 
Sbjct: 241 ENRRLQKELQELRALKTTNSLYMQLPATTLTMCPSCERVTSSSAASTVAATEGVTKRSGL 300

Query: 301 AISGG-ASSSSFPFSAKTQTHQSTTS 319
           AI GG   SSSFPFSAKTQ+HQST S
Sbjct: 301 AIGGGRPGSSSFPFSAKTQSHQSTAS 326

[Close]

BLAST of Carg13470 vs. NCBI nr
Match: XP_004135907.1 (PREDICTED: homeobox-leucine zipper protein HOX11-like [Cucumis sativus] >KGN45166.1 hypothetical protein Csa_7G429520 [Cucumis sativus])

HSP 1 Score: 512.3 bits (1318), Expect = 1.2e-141
Identity = 276/326 (84.66%), Postives = 289/326 (88.65%), Query Frame = 0


Query: 1   MELGLSLGDTPKPFRFVDKQRQ---PQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQ 60
           MELGLSLGD PKPFRFV+KQ Q   PQR LSR DLGFCVDLSIGR++AGDKE DE+KPNQ
Sbjct: 1   MELGLSLGDAPKPFRFVEKQSQVPSPQRRLSRKDLGFCVDLSIGRSVAGDKEDDEDKPNQ 60

Query: 61  REEESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNSAASSFQM 120
            E+ESDGNEDPP QLDLLP NPV RNLTNPYQGFPWPSSENDE EDR+ASPNSAASSFQM
Sbjct: 61  GEDESDGNEDPPTQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 121 EFGLYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLE 180
           EFGLYG GGNISSR DQM+N V+NEVGESERASSRASDEDENG TRKKLRLSK+QSA+LE
Sbjct: 121 EFGLYGSGGNISSRRDQMENGVMNEVGESERASSRASDEDENGCTRKKLRLSKEQSAFLE 180

Query: 181 ESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTD 240
           ESFKEHNTLNPKQK ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLT+
Sbjct: 181 ESFKEHNTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTE 240

Query: 241 ENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVA----TAIAGGGKLPGF 300
           ENRRLQKELQELRALKTTNS YMQLPATTLTMCPSCERVTS+ A     A  G  K  G 
Sbjct: 241 ENRRLQKELQELRALKTTNSLYMQLPATTLTMCPSCERVTSSSAASTVAATEGVTKRSGL 300

Query: 301 AISGG-ASSSSFPFSAKTQTHQSTTS 319
           AI GG   SSSFPFSAKTQ+HQST S
Sbjct: 301 AIGGGRPGSSSFPFSAKTQSHQSTAS 326

[Close]

BLAST of Carg13470 vs. TAIR10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana)

HSP 1 Score: 256.5 bits (654), Expect = 2.1e-68
Identity = 168/314 (53.50%), Postives = 202/314 (64.33%), Query Frame = 0


Query: 1   MELGLSLGD-TPKPFRFVDKQRQ------PQRGLSRPDLGFCVDL--------SIGRTIA 60
           MEL LSLGD T K F F++K  +           S  DLGFC+ L        S+  + +
Sbjct: 1   MELALSLGDNTKKQFSFMEKNSKINNPSVSSTSTSEKDLGFCMALDVAFGGHRSLSSSSS 60

Query: 61  GDKEGDEEKPNQREEESD-----GNEDPPIQLDL-----LPRNPVQRNLTNPYQGFPWPS 120
              E +++KP  R ++SD      + DPP+QL L     LP N   R       G     
Sbjct: 61  PSVEDEKKKPAPRAKKSDEFRVSSSVDPPLQLQLHFPNWLPENSKGRQGGRMPLGAXXXX 120

Query: 121 SENDEVEDRSAS-----PNSAASSFQMEFGLYGGGGNISSRIDQMKNSVVNEVGESERAS 180
                      S     P+S  SSFQ++FG+   G    S     K  + +EV   ER++
Sbjct: 121 XXXXXXXXXXPSMSVSPPDSVTSSFQLDFGIKSYGYERRSN----KRDIDDEV---ERSA 180

Query: 181 SRASDE---DENGSTRKKLRLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEV 240
           SRAS+E   DENGSTRKKLRLSKDQSA+LE+SFKEH+TLNPKQK+ALAKQLNLRPRQVEV
Sbjct: 181 SRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEV 240

Query: 241 WFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKELQELRALKTTNSFYMQLPATTL 282
           WFQNRRARTKLKQTEVDCEYLKRCCE+LT+ENRRLQKE++ELR LKT+  FYMQLPATTL
Sbjct: 241 WFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQLPATTL 300

[Close]

BLAST of Carg13470 vs. TAIR10
Match: AT5G47370.1 (Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein)

HSP 1 Score: 190.3 bits (482), Expect = 1.9e-48
Identity = 126/234 (53.85%), Postives = 148/234 (63.25%), Query Frame = 0


Query: 69  PIQLDLLPRNPVQRNLTNPYQGFPW------------------PSSENDEVEDRSASPNS 128
           P+Q++L P + +  NL    Q  PW                  PS+ N E +   +SPNS
Sbjct: 22  PLQMNLNPNSSLSNNL----QRLPWNQTFDPTSDLRKIDVNSFPSTVNCEEDTGVSSPNS 81

Query: 129 AASSF-----QMEFGLYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDENG--STR 188
             SS          G+ G G  + S  D       +E+      S   SDE+E+G  ++R
Sbjct: 82  TISSTISGKRSEREGISGTG--VGSGDDH------DEITPDRGYSRGTSDEEEDGGETSR 141

Query: 189 KKLRLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEV 248
           KKLRLSKDQSA+LEE+FKEHNTLNPKQKLALAK+LNL  RQVEVWFQNRRARTKLKQTEV
Sbjct: 142 KKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEV 201

Query: 249 DCEYLKRCCETLTDENRRLQKELQELRALKTTNSFYMQL-PATTLTMCPSCERV 277
           DCEYLKRC E LT+ENRRLQKE  ELR LK +  FY Q+ P TTL MCPSCERV
Sbjct: 202 DCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMTPPTTLIMCPSCERV 243

[Close]

BLAST of Carg13470 vs. TAIR10
Match: AT2G22800.1 (Homeobox-leucine zipper protein family)

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-47
Identity = 105/173 (60.69%), Postives = 122/173 (70.52%), Query Frame = 0


Query: 104 RSASPNSAASSFQMEFGLYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDENGSTR 163
           R  S +S  SSF          G +  R          E   +ER  S   +++E  S R
Sbjct: 61  RQTSSHSGVSSF--------SSGRVVKRERDGGEESPEEEEMTERVISDYHEDEEGISAR 120

Query: 164 KKLRLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEV 223
           KKLRL+K QSA LEESFK+H+TLNPKQK  LA+QLNLRPRQVEVWFQNRRARTKLKQTEV
Sbjct: 121 KKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEV 180

Query: 224 DCEYLKRCCETLTDENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERV 277
           DCE+LK+CCETL DEN RLQKE+QEL+ LK T  FYM +PA+TLT CPSCER+
Sbjct: 181 DCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTLTKCPSCERI 225

[Close]

BLAST of Carg13470 vs. TAIR10
Match: AT4G37790.1 (Homeobox-leucine zipper protein family)

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-47
Identity = 115/213 (53.99%), Postives = 142/213 (66.67%), Query Frame = 0


Query: 104 RSASPNSAASSF-----QMEFGLYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDE 163
           R  S +S  SSF     + E  + GG G   +  +  +  V + V +         D++E
Sbjct: 69  RQTSSHSGISSFSSGRVKREREISGGDGEEEAE-ETTERVVCSRVSDDH-------DDEE 128

Query: 164 NGSTRKKLRLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKL 223
             S RKKLRL+K QSA LE++FK H+TLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKL
Sbjct: 129 GVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKL 188

Query: 224 KQTEVDCEYLKRCCETLTDENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTS 283
           KQTEVDCE+LK+CCETLTDENRRLQKELQ+L+ALK +  FYM +PA TLTMCPSCER+  
Sbjct: 189 KQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMHMPAATLTMCPSCERL-- 248

Query: 284 TVATAIAGGGKLPGFAISGGASSSSFPFSAKTQ 312
                  GGG + G   +    ++   FS  T+
Sbjct: 249 -------GGGGVGGDTTAVDEETAKGAFSIVTK 264

[Close]

BLAST of Carg13470 vs. TAIR10
Match: AT4G17460.1 (Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-45
Identity = 124/235 (52.77%), Postives = 150/235 (63.83%), Query Frame = 0


Query: 66  EDPPIQLDLLPRNPVQRNLTNPYQGFPWPS---SENDEVED---RSASPNSAASSFQM-- 125
           ++ P+QL+L P +    NL    Q FPW     S +D+ +    R    NS  ++  +  
Sbjct: 18  QNHPLQLNLKPTSSPMSNL----QMFPWNQTLVSSSDQQKQQFLRKIDVNSLPTTVDLEE 77

Query: 126 EFGLYGGGGNISSRIDQMKNSVVNE------VGES-----ERASSRAS---DEDENGST- 185
           E G+      ISS +   + S   E       G+      +R+SSR +   +ED  G T 
Sbjct: 78  ETGVSSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDITLDRSSSRGTSDEEEDYGGETC 137

Query: 186 RKKLRLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTE 245
           RKKLRLSKDQSA LE++FKEHNTLNPKQKLALAK+L L  RQVEVWFQNRRARTKLKQTE
Sbjct: 138 RKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTE 197

Query: 246 VDCEYLKRCCETLTDENRRLQKELQELRALKTTNSFYMQL-PATTLTMCPSCERV 277
           VDCEYLKRC E LT+ENRRL+KE  ELRALK +   Y Q+ P TTL MCPSCERV
Sbjct: 198 VDCEYLKRCVEKLTEENRRLEKEAAELRALKLSPRLYGQMSPPTTLLMCPSCERV 248

[Close]

BLAST of Carg13470 vs. Swiss-Prot
Match: sp|P46665|HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 PE=2 SV=3)

HSP 1 Score: 256.5 bits (654), Expect = 3.8e-67
Identity = 168/314 (53.50%), Postives = 202/314 (64.33%), Query Frame = 0


Query: 1   MELGLSLGD-TPKPFRFVDKQRQ------PQRGLSRPDLGFCVDL--------SIGRTIA 60
           MEL LSLGD T K F F++K  +           S  DLGFC+ L        S+  + +
Sbjct: 1   MELALSLGDNTKKQFSFMEKNSKINNPSVSSTSTSEKDLGFCMALDVAFGGHRSLSSSSS 60

Query: 61  GDKEGDEEKPNQREEESD-----GNEDPPIQLDL-----LPRNPVQRNLTNPYQGFPWPS 120
              E +++KP  R ++SD      + DPP+QL L     LP N   R       G     
Sbjct: 61  PSVEDEKKKPAPRAKKSDEFRVSSSVDPPLQLQLHFPNWLPENSKGRQGGRMPLGAXXXX 120

Query: 121 SENDEVEDRSAS-----PNSAASSFQMEFGLYGGGGNISSRIDQMKNSVVNEVGESERAS 180
                      S     P+S  SSFQ++FG+   G    S     K  + +EV   ER++
Sbjct: 121 XXXXXXXXXXPSMSVSPPDSVTSSFQLDFGIKSYGYERRSN----KRDIDDEV---ERSA 180

Query: 181 SRASDE---DENGSTRKKLRLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEV 240
           SRAS+E   DENGSTRKKLRLSKDQSA+LE+SFKEH+TLNPKQK+ALAKQLNLRPRQVEV
Sbjct: 181 SRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEV 240

Query: 241 WFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKELQELRALKTTNSFYMQLPATTL 282
           WFQNRRARTKLKQTEVDCEYLKRCCE+LT+ENRRLQKE++ELR LKT+  FYMQLPATTL
Sbjct: 241 WFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQLPATTL 300

[Close]

BLAST of Carg13470 vs. Swiss-Prot
Match: sp|A2Z1U1|HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=HOX11 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.2e-50
Identity = 101/112 (90.18%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 167 RLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 226
           RLSK+QSA+LEESFKEH+TLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE
Sbjct: 93  RLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 152

Query: 227 YLKRCCETLTDENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTS 279
           YLKRCCETLT+ENRRLQKEL ELRALKT + FYM LPATTL+MCPSCERV S
Sbjct: 153 YLKRCCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVAS 204

[Close]

BLAST of Carg13470 vs. Swiss-Prot
Match: sp|Q67UE2|HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX11 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.2e-50
Identity = 101/112 (90.18%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 167 RLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 226
           RLSK+QSA+LEESFKEH+TLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE
Sbjct: 180 RLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 239

Query: 227 YLKRCCETLTDENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTS 279
           YLKRCCETLT+ENRRLQKEL ELRALKT + FYM LPATTL+MCPSCERV S
Sbjct: 240 YLKRCCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVAS 291

[Close]

BLAST of Carg13470 vs. Swiss-Prot
Match: sp|A2YW03|HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=HOX27 PE=2 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 3.6e-49
Identity = 100/115 (86.96%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 167 RLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 226
           RLSK+QSA+LEESFKEH+TLNPKQK+ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE
Sbjct: 177 RLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 236

Query: 227 YLKRCCETLTDENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVA 282
           YLKRCCETLT+ENRRL KEL ELRALKT   FYM LPATTL+MCPSCERV S  A
Sbjct: 237 YLKRCCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCERVASNPA 291

[Close]

BLAST of Carg13470 vs. Swiss-Prot
Match: sp|Q6YPD0|HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX27 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.6e-49
Identity = 100/115 (86.96%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 167 RLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 226
           RLSK+QSA+LEESFKEH+TLNPKQK+ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE
Sbjct: 177 RLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 236

Query: 227 YLKRCCETLTDENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVA 282
           YLKRCCETLT+ENRRL KEL ELRALKT   FYM LPATTL+MCPSCERV S  A
Sbjct: 237 YLKRCCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCERVASNPA 291

[Close]

BLAST of Carg13470 vs. TrEMBL
Match: tr|A0A1S3CEP0|A0A1S3CEP0_CUCME (homeobox-leucine zipper protein HOX11-like OS=Cucumis melo OX=3656 GN=LOC103499889 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 7.1e-143
Identity = 277/326 (84.97%), Postives = 290/326 (88.96%), Query Frame = 0


Query: 1   MELGLSLGDTPKPFRFVDKQRQ---PQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQ 60
           MELGLSLGD PKPFRFVDKQ Q   PQR LSR DLGFCVDLSIGR++AGDKE DE+KPNQ
Sbjct: 1   MELGLSLGDAPKPFRFVDKQSQVPSPQRRLSRKDLGFCVDLSIGRSVAGDKEDDEDKPNQ 60

Query: 61  REEESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNSAASSFQM 120
            E+ESDGNEDPP+QLDLLP NPV RNLTNPYQGFPWPSSENDE EDR+ASPNSAASSFQM
Sbjct: 61  GEDESDGNEDPPVQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 121 EFGLYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLE 180
           EFGLYG GGNIS R DQM+N V+NEVGESERASSRASDEDENG TRKKLRLSK+QSA+LE
Sbjct: 121 EFGLYGSGGNISCRRDQMENGVMNEVGESERASSRASDEDENGCTRKKLRLSKEQSAFLE 180

Query: 181 ESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTD 240
           ESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLT+
Sbjct: 181 ESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTE 240

Query: 241 ENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVA----TAIAGGGKLPGF 300
           ENRRLQKELQELRALKTTNS YMQLPATTLTMCPSCERVTS+ A     A  G  K  G 
Sbjct: 241 ENRRLQKELQELRALKTTNSLYMQLPATTLTMCPSCERVTSSSAASTVAATEGVTKRSGL 300

Query: 301 AISGG-ASSSSFPFSAKTQTHQSTTS 319
           AI GG   SSSFPFSAKTQ+HQST S
Sbjct: 301 AIGGGRPGSSSFPFSAKTQSHQSTAS 326

[Close]

BLAST of Carg13470 vs. TrEMBL
Match: tr|A0A0A0KBJ3|A0A0A0KBJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429520 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 7.8e-142
Identity = 276/326 (84.66%), Postives = 289/326 (88.65%), Query Frame = 0


Query: 1   MELGLSLGDTPKPFRFVDKQRQ---PQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQ 60
           MELGLSLGD PKPFRFV+KQ Q   PQR LSR DLGFCVDLSIGR++AGDKE DE+KPNQ
Sbjct: 1   MELGLSLGDAPKPFRFVEKQSQVPSPQRRLSRKDLGFCVDLSIGRSVAGDKEDDEDKPNQ 60

Query: 61  REEESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSENDEVEDRSASPNSAASSFQM 120
            E+ESDGNEDPP QLDLLP NPV RNLTNPYQGFPWPSSENDE EDR+ASPNSAASSFQM
Sbjct: 61  GEDESDGNEDPPTQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 121 EFGLYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDENGSTRKKLRLSKDQSAYLE 180
           EFGLYG GGNISSR DQM+N V+NEVGESERASSRASDEDENG TRKKLRLSK+QSA+LE
Sbjct: 121 EFGLYGSGGNISSRRDQMENGVMNEVGESERASSRASDEDENGCTRKKLRLSKEQSAFLE 180

Query: 181 ESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTD 240
           ESFKEHNTLNPKQK ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLT+
Sbjct: 181 ESFKEHNTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTE 240

Query: 241 ENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTVA----TAIAGGGKLPGF 300
           ENRRLQKELQELRALKTTNS YMQLPATTLTMCPSCERVTS+ A     A  G  K  G 
Sbjct: 241 ENRRLQKELQELRALKTTNSLYMQLPATTLTMCPSCERVTSSSAASTVAATEGVTKRSGL 300

Query: 301 AISGG-ASSSSFPFSAKTQTHQSTTS 319
           AI GG   SSSFPFSAKTQ+HQST S
Sbjct: 301 AIGGGRPGSSSFPFSAKTQSHQSTAS 326

[Close]

BLAST of Carg13470 vs. TrEMBL
Match: tr|A0A200QRK6|A0A200QRK6_9MAGN (Homeobox domain OS=Macleaya cordata OX=56857 GN=BVC80_8941g37 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-82
Identity = 184/299 (61.54%), Postives = 216/299 (72.24%), Query Frame = 0


Query: 1   MELGLSLGDTPKPF-RFVDKQRQPQRGLSRPDLGFCVDLSIGRTIAGDKEGDEEKPNQRE 60
           MELGLSLG+  +PF    DK R     ++   LGFC+ L +G     D+E  E+   Q+ 
Sbjct: 1   MELGLSLGEVSRPFGGCTDKNRSK---MNNKSLGFCMGLGVGGFNGRDEEKGEQSDEQQR 60

Query: 61  EESDGNEDPPIQLDLLPRNPVQRNLTNPYQGFPWPSSEN------------------DEV 120
            E   + DPP+QLDLLP  PV RN  +   GFPW SSEN                  +E 
Sbjct: 61  NERRVSADPPVQLDLLPLAPVPRNQPSSQTGFPW-SSENGNSEVGSRGFDVNRLPSTEEA 120

Query: 121 EDRSA--SPNSAASSFQMEFGLYGGGGNISSRIDQMKNSVVNEVGESERASSRASDEDEN 180
           +D +A  SPNS  SSFQ++F +Y  G    S+ D  + + +N+V E+ER SSRASDE+EN
Sbjct: 121 DDGAAISSPNSTVSSFQIDFSIYRNGSGSGSKRDS-EIAGLNDV-ETERTSSRASDEEEN 180

Query: 181 GSTRKKLRLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLK 240
           G TRKKLRLSK+QSA+LEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLK
Sbjct: 181 GLTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLK 240

Query: 241 QTEVDCEYLKRCCETLTDENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTS 279
           QTEVDCEYLKRCCETLT+ENRRLQKELQELRALKT++ +YMQLPATTLTMCPSCERV +
Sbjct: 241 QTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSHPYYMQLPATTLTMCPSCERVAT 293

[Close]

BLAST of Carg13470 vs. TrEMBL
Match: tr|A0A1U8AS99|A0A1U8AS99_NELNU (homeobox-leucine zipper protein HOX11-like OS=Nelumbo nucifera OX=4432 GN=LOC104603567 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.1e-82
Identity = 203/360 (56.39%), Postives = 238/360 (66.11%), Query Frame = 0


Query: 1   MELGLSLGDTPKPFRFVDKQRQPQRGLSRPDLGFCVDLSIGRTIAGDK---EGDEEK--- 60
           MELGLSLGD  K F FV+K R+   G S   LGFC+ L +G    G++   E DE +   
Sbjct: 1   MELGLSLGDASKAFPFVEKARRIS-GSSSSSLGFCMGLGVGVVNGGEEDRIEVDEGEDGG 60

Query: 61  -PNQREEESDGNEDPPIQLDLLPRNPVQRN-LTNPYQGFPWPSSEN-------------- 120
              Q+ EE   + DPP+QLDLLP  PV RN  ++   GFPWP+                 
Sbjct: 61  GDGQQREERRDSADPPVQLDLLPPGPVPRNPPSSSPLGFPWPTENGNCEAGSSGHLGASA 120

Query: 121 -----------DEVEDRSA--SPNSAASSFQMEFGLYGGGGNISSRIDQMKNSVVNEVGE 180
                      ++ +D +A  SPNSA SSFQM+F +Y G G  S +  +   S  NEV E
Sbjct: 121 RGFDVNRLPAAEDADDGAAVSSPNSAVSSFQMDFSIYRGAGGGSKKDAE---SAGNEV-E 180

Query: 181 SERASSRASDEDENGSTRKKLRLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQV 240
           +ERASSRASDE+ENG TRKKLRLSK+QSA+LEESFKEHNTLNPKQKLALAKQLNLRPRQV
Sbjct: 181 AERASSRASDEEENGMTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQV 240

Query: 241 EVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKELQELRALKTTNSFYMQLPAT 300
           EVWFQNRRARTKLKQTEVDCEYLKRCCETLT+ENRRLQKELQELRALKT++ FYMQLPAT
Sbjct: 241 EVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSHPFYMQLPAT 300

Query: 301 TLTMCPSCERV--TSTVATAIAGGGKLPGFAISGGASSS-----SFPFSAKTQTHQSTTS 319
           TLTMCPSCERV  TST  +A+         A +  ++ S      +PFS     H S  +
Sbjct: 301 TLTMCPSCERVATTSTAPSAMTDASATTTPATNKASAFSLTRPRFYPFSQAHAPHPSAAT 355

[Close]

BLAST of Carg13470 vs. TrEMBL
Match: tr|A0A061F4R6|A0A061F4R6_THECC (Homeobox from OS=Theobroma cacao OX=3641 GN=TCM_024940 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.7e-81
Identity = 189/306 (61.76%), Postives = 213/306 (69.61%), Query Frame = 0


Query: 1   MELGLSLGDTPKPFRFVDKQRQPQRGLSRPDLGFCVDLSIGRTIAGDKEGDE-EKPNQRE 60
           MEL LSLGD  KPF F+DK  +    LS  DLGFC  + +G      ++GD  E  ++ E
Sbjct: 1   MELALSLGDPSKPFSFLDKAPK----LSSKDLGFC--MGLGNGFRSQEKGDAFEGESRGE 60

Query: 61  EESDGNE-----DPPIQLDLLPRNPVQRNLTNPYQGFPW------PSSEN---------- 120
              DG++     DPP+QLDLLP +PV R+       FPW       SSE           
Sbjct: 61  ATRDGHDKRVSSDPPLQLDLLPFSPVPRSQPPSQLRFPWLTDNQTGSSEGQGRGLDVNRL 120

Query: 121 ------DEVEDRSA--SPNSAASSFQMEFGLYGGGGNISSRIDQMKNSVVNEVGESERAS 180
                 DE ED +A  SPNSA SSFQM+FG+  G G     ++           E+ERAS
Sbjct: 121 PVVAVMDEAEDGAAMSSPNSAVSSFQMDFGIRNGSGRGKRDLEV----------ENERAS 180

Query: 181 SRASDEDENGSTRKKLRLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQ 240
           SRASD+DENGSTRKKLRLSK+QSA+LEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQ
Sbjct: 181 SRASDDDENGSTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQ 240

Query: 241 NRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKELQELRALKTTNSFYMQLPATTLTMC 277
           NRRARTKLKQTEVDCEYLKRCCETLT+ENRRLQKELQELRALKT+  FYMQLPATTLTMC
Sbjct: 241 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMC 290

The following BLAST results are available for this feature:

BLAST of Carg13470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513861.1	2.3e-169	98.74	homeobox-leucine zipper protein HOX11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022959833.1	1.5e-168	98.74	homeobox-leucine zipper protein HOX11-like [Cucurbita moschata]	[more]
XP_023004600.1	3.1e-166	97.48	homeobox-leucine zipper protein HOX11-like [Cucurbita maxima]	[more]
XP_008461247.1	1.1e-142	84.97	PREDICTED: homeobox-leucine zipper protein HOX11-like [Cucumis melo]	[more]
XP_004135907.1	1.2e-141	84.66	PREDICTED: homeobox-leucine zipper protein HOX11-like [Cucumis sativus] >KGN4516...	[more]

BLAST of Carg13470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06710.1	2.1e-68	53.50	homeobox from Arabidopsis thaliana	[more]
AT5G47370.1	1.9e-48	53.85	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]
AT2G22800.1	2.1e-47	60.69	Homeobox-leucine zipper protein family	[more]
AT4G37790.1	2.1e-47	53.99	Homeobox-leucine zipper protein family	[more]
AT4G17460.1	1.5e-45	52.77	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]

BLAST of Carg13470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P46665\|HAT14_ARATH	3.8e-67	53.50	Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 P...	[more]
sp\|A2Z1U1\|HOX11_ORYSI	3.2e-50	90.18	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
sp\|Q67UE2\|HOX11_ORYSJ	3.2e-50	90.18	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
sp\|A2YW03\|HOX27_ORYSI	3.6e-49	86.96	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
sp\|Q6YPD0\|HOX27_ORYSJ	3.6e-49	86.96	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Carg13470 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CEP0\|A0A1S3CEP0_CUCME	7.1e-143	84.97	homeobox-leucine zipper protein HOX11-like OS=Cucumis melo OX=3656 GN=LOC1034998...	[more]
tr\|A0A0A0KBJ3\|A0A0A0KBJ3_CUCSA	7.8e-142	84.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429520 PE=4 SV=1	[more]
tr\|A0A200QRK6\|A0A200QRK6_9MAGN	1.8e-82	61.54	Homeobox domain OS=Macleaya cordata OX=56857 GN=BVC80_8941g37 PE=4 SV=1	[more]
tr\|A0A1U8AS99\|A0A1U8AS99_NELNU	4.1e-82	56.39	homeobox-leucine zipper protein HOX11-like OS=Nelumbo nucifera OX=4432 GN=LOC104...	[more]
tr\|A0A061F4R6\|A0A061F4R6_THECC	7.7e-81	61.76	Homeobox from OS=Theobroma cacao OX=3641 GN=TCM_024940 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017970	Homeobox_CS
IPR003106	Leu_zip_homeo
IPR001356	Homeobox_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13470-RA	Carg13470-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 232..255
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 138..218 e-value: 4.8E-18 score: 67.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..168
None	No IPR available	PANTHER	PTHR24326:SF105	SUBFAMILY NOT NAMED	coord: 77..283
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 77..283
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 161..223 e-value: 1.0E-15 score: 68.3
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 163..217 e-value: 3.4E-15 score: 55.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 159..219 score: 17.119
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 163..220 e-value: 1.35087E-14 score: 66.1128
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 219..262 e-value: 3.8E-25 score: 99.5
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 219..253 e-value: 6.7E-11 score: 42.1
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 194..217
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 155..220

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13470	Cla015276	Watermelon (97103) v1	carwmB0451
Carg13470	Csa3G702640	Cucumber (Chinese Long) v2	carcuB0483
Carg13470	Csa7G429520	Cucumber (Chinese Long) v2	carcuB0484
Carg13470	MELO3C023937	Melon (DHL92) v3.5.1	carmeB0457
Carg13470	MELO3C023514	Melon (DHL92) v3.5.1	carmeB0455
Carg13470	ClCG10G012670	Watermelon (Charleston Gray)	carwcgB0443
Carg13470	ClCG09G003800	Watermelon (Charleston Gray)	carwcgB0442
Carg13470	CSPI03G30010	Wild cucumber (PI 183967)	carcpiB0488
Carg13470	CSPI07G19610	Wild cucumber (PI 183967)	carcpiB0489
Carg13470	Cucsa.050000	Cucumber (Gy14) v1	carcgyB0519
Carg13470	CmaCh01G002070	Cucurbita maxima (Rimu)	carcmaB0626
Carg13470	CmaCh17G009300	Cucurbita maxima (Rimu)	carcmaB0625
Carg13470	CmaCh08G005560	Cucurbita maxima (Rimu)	carcmaB0628
Carg13470	CmoCh01G002170	Cucurbita moschata (Rifu)	carcmoB0609
Carg13470	CmoCh08G005480	Cucurbita moschata (Rifu)	carcmoB0610
Carg13470	CmoCh17G009020	Cucurbita moschata (Rifu)	carcmoB0608
Carg13470	Lsi02G026120	Bottle gourd (USVL1VR-Ls)	carlsiB409
Carg13470	Cp4.1LG12g06970	Cucurbita pepo (Zucchini)	carcpeB0631
Carg13470	Cp4.1LG17g08420	Cucurbita pepo (Zucchini)	carcpeB0632
Carg13470	Cp4.1LG02g15420	Cucurbita pepo (Zucchini)	carcpeB0633
Carg13470	CsGy3G027810	Cucumber (Gy14) v2	carcgybB0460
Carg13470	CsGy7G017930	Cucumber (Gy14) v2	carcgybB0461
Carg13470	MELO3C023937.2	Melon (DHL92) v3.6.1	carmedB0460
Carg13470	MELO3C023514.2	Melon (DHL92) v3.6.1	carmedB0458
Carg13470	CsaV3_7G031430	Cucumber (Chinese Long) v3	carcucB0486
Carg13470	CsaV3_3G032480	Cucumber (Chinese Long) v3	carcucB0485
Carg13470	Cla97C09G166050	Watermelon (97103) v2	carwmbB0475
Carg13470	Bhi09G000487	Wax gourd	carwgoB0546

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg13470	Carg18702	Silver-seed gourd	carcarB379
Carg13470	Carg07305	Silver-seed gourd	carcarB453

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13470	Silver-seed gourd	carcarB452
Carg13470	Silver-seed gourd	carcarB454
Carg13470	Silver-seed gourd	carcarB455
Carg13470	Cucurbita maxima (Rimu)	carcmaB0624
Carg13470	Cucurbita maxima (Rimu)	carcmaB0627
Carg13470	Cucurbita moschata (Rifu)	carcmoB0607
Carg13470	Cucurbita pepo (Zucchini)	carcpeB0634
Carg13470	Cucurbita pepo (Zucchini)	carcpeB0635
Carg13470	Bottle gourd (USVL1VR-Ls)	carlsiB410
Carg13470	Watermelon (97103) v2	carwmbB0472