Carg07305 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07305
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Homeobox-leucine zipper protein family
Location	Cucurbita_argyrosperma_scaffold_019 : 35025 .. 36648 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTGGGTTTGAGGCTTGGAGATCAACAACGAACCCACAGCCACAACCCTAAGCTTCTTCACCTCGCTCTTCTTCCTCCTACTCCTACTCCAGACGGCGGCGGTGGGGAATCTCCGAGAAACCCATATCTGTGCTCCTCGTTGGAGCTGGGATTGTATGAAGTGGAAGAGCATCAGGGAAATAGCGACAGAGGTTGCTCTAGAGGCAGCGATGAAGATGATCAAATTTTGGGTTCCAGAAAGAAACTGCGGCTTTCCAGAGAACAGTCGGCGTTCCTTGAAGACAGCTTCAAAGATCATCATACACTTTACCCTGTAAGACCCTCTCTTCTTCCTCTTCATTCAATCATATACATGTTCCATTATTGGTATAAGACGTCAGGGATCACGAATCTTCACAATGATATGTTATTGTCTACTTTCACCATAAGCTCGAGTGGCTCATATCAATAGAAATAATATTTCTTGGTTATAAACCGATGCTCATTCTCTTAATTAGCCCATGTGTAACTCTTCCAGCAATCCTCCTCTCGAACAAAGTATACCATAGAGTCTCCTCCAAGGGCTATGGAGCCATTGAGCCTCCTATAAGGTTTATGAAGCTCTTGAACAGCTTCTCTTTAATTGAAACTCGATTCCTTTCTCTAGAGCCATCAAGCAAAGTACACCCTCACCATAGAGCCTCTCCAAAGGTCTATGTAGTCCTCAAACAGCCTCCCTTTAATCGAGACTCGAATCTTTTCTCTAGAGCCATCGAGCAAAGTACACTCTCACCATAGAGCCTCTCGGGAGGCCTATGTAGCCCTCGAACAGCCTCCCTTTAATCGAGGTTCGACTCCTTTCTCTAGAGCCATCGAGCAAAGTACACCCTCACCATAGAGGCTCTATGGAGGCCTATGTAGCCCTCAAACTCCACAATAGTATCAAGCTTTTGGTTTCTAAAAGGCTTCATTACTTATAAACTCATGATCATTCCCTTAATTAGCCACGTGTGACTCTTCCCAACAATCTTCTCACTATTGTGAAGGGTCGTGATTCGTAACAATAGAACGAGTACTATTTAAAATAAATTTAAATTTAAAAAGTTTAAAAATTTATAAGAGATATGAAATAGCAGAAGCAAAAGGTAGAACTTGCAAGAAGGCTAAATCTCCGTCCACGCCAAGTAGAAGTGTGGTTTCAAAACAGACGAGCAAGGTGACCATCGCCATTATCTCTCTCTTTCTCATTATTTATTTATTTATTTATTTATTTACAGTGTTAACATTACAGAACCAAGCTGAAGCAAACCGAAGTTGACTGTGAGTACTTGAAAAACTGTTGCCAAACACTAACCCAACAAAACAGGAAGCTTCGAAAGGAGCTTCAAGATTTAAGAGCTTTGAAAACCACTGATTCTCTCTTCATGCATTCCCCCGCCACCACTCTCACCATGTGTGCGTCTTGTGAACGCGCCGCCGTTCTTCACCCGCTGAACTCCAAGGCTTCTGGGTTTTCGTTTACTACAAATGGGTCCTCTCCACAATAATTATTCACAACCTTTTTTTGTTCACTATTTCTATGTGAATTTTCAAGATTTATATATATTTTTTATTGCTATGATATTGAAATTTTGTTTATT

mRNA sequence

ATGGAGTTGGGTTTGAGGCTTGGAGATCAACAACGAACCCACAGCCACAACCCTAAGCTTCTTCACCTCGCTCTTCTTCCTCCTACTCCTACTCCAGACGGCGGCGGTGGGGAATCTCCGAGAAACCCATATCTGTGCTCCTCGTTGGAGCTGGGATTGTATGAAGTGGAAGAGCATCAGGGAAATAGCGACAGAGGTTGCTCTAGAGGCAGCGATGAAGATGATCAAATTTTGGGTTCCAGAAAGAAACTGCGGCTTTCCAGAGAACAGTCGGCGTTCCTTGAAGACAGCTTCAAAGATCATCATACACTTTACCCTAAGCAAAAGGTAGAACTTGCAAGAAGGCTAAATCTCCGTCCACGCCAAGTAGAAGTGTGGTTTCAAAACAGACGAGCAAGAACCAAGCTGAAGCAAACCGAAGTTGACTGTGAGTACTTGAAAAACTGTTGCCAAACACTAACCCAACAAAACAGGAAGCTTCGAAAGGAGCTTCAAGATTTAAGAGCTTTGAAAACCACTGATTCTCTCTTCATGCATTCCCCCGCCACCACTCTCACCATGTGTGCGTCTTGTGAACGCGCCGCCGTTCTTCACCCGCTGAACTCCAAGGCTTCTGGGTTTTCGTTTACTACAAATGGGTCCTCTCCACAATAATTATTCACAACCTTTTTTTGTTCACTATTTCTATGTGAATTTTCAAGATTTATATATATTTTTTATTGCTATGATATTGAAATTTTGTTTATT

Coding sequence (CDS)

ATGGAGTTGGGTTTGAGGCTTGGAGATCAACAACGAACCCACAGCCACAACCCTAAGCTTCTTCACCTCGCTCTTCTTCCTCCTACTCCTACTCCAGACGGCGGCGGTGGGGAATCTCCGAGAAACCCATATCTGTGCTCCTCGTTGGAGCTGGGATTGTATGAAGTGGAAGAGCATCAGGGAAATAGCGACAGAGGTTGCTCTAGAGGCAGCGATGAAGATGATCAAATTTTGGGTTCCAGAAAGAAACTGCGGCTTTCCAGAGAACAGTCGGCGTTCCTTGAAGACAGCTTCAAAGATCATCATACACTTTACCCTAAGCAAAAGGTAGAACTTGCAAGAAGGCTAAATCTCCGTCCACGCCAAGTAGAAGTGTGGTTTCAAAACAGACGAGCAAGAACCAAGCTGAAGCAAACCGAAGTTGACTGTGAGTACTTGAAAAACTGTTGCCAAACACTAACCCAACAAAACAGGAAGCTTCGAAAGGAGCTTCAAGATTTAAGAGCTTTGAAAACCACTGATTCTCTCTTCATGCATTCCCCCGCCACCACTCTCACCATGTGTGCGTCTTGTGAACGCGCCGCCGTTCTTCACCCGCTGAACTCCAAGGCTTCTGGGTTTTCGTTTACTACAAATGGGTCCTCTCCACAATAA

Protein sequence

MELGLRLGDQQRTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ

Homology

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BLAST of Carg07305 vs. NCBI nr
Match: XP_022949216.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita moschata])

HSP 1 Score: 431.0 bits (1107), Expect = 2.4e-117
Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MELGLRLGDQQRTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ 60
           MELGLRLGDQQ+THSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ
Sbjct: 1   MELGLRLGDQQQTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ 60

Query: 61  GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYP-KQKVELARRLNLR 120
           GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYP KQKVELARRLNLR
Sbjct: 61  GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPQKQKVELARRLNLR 120

Query: 121 PRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMH 180
           PRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMH
Sbjct: 121 PRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMH 180

Query: 181 SPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ 218
           SPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ
Sbjct: 181 SPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ 218

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BLAST of Carg07305 vs. NCBI nr
Match: XP_023525421.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.0 bits (998), Expect = 1.0e-104
Identity = 202/228 (88.60%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 1   MELGLRLGDQQRTHSHNPKL----------LHLALLPP--TPTPDGGGGESPRNPYLCSS 60
           MELGLRLGDQQ+THSHNPKL          LHLALLPP            SPRNPYLCSS
Sbjct: 1   MELGLRLGDQQQTHSHNPKLLPSFFHPPPILHLALLPPXXXXXXXXXXXXSPRNPYLCSS 60

Query: 61  LELGLYEVEEHQGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQ 120
           LELGLYEVE+HQGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLE+SFKDHHTLYPKQ
Sbjct: 61  LELGLYEVEDHQGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEESFKDHHTLYPKQ 120

Query: 121 KVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLR 180
           KVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLR
Sbjct: 121 KVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLR 180

Query: 181 ALKTTDSLFMHSPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSP 217
           ALKTTDSLFMHSPATTLTMCASCERAAVLHPLNSKASGFSFTTNGS P
Sbjct: 181 ALKTTDSLFMHSPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSFP 228

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BLAST of Carg07305 vs. NCBI nr
Match: XP_022998494.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita maxima])

HSP 1 Score: 314.7 bits (805), Expect = 2.5e-82
Identity = 170/217 (78.34%), Postives = 178/217 (82.03%), Query Frame = 0


Query: 1   MELGLRLGDQQRTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEE-H 60
           MELGLRLGDQQ                               P +CSSLELGLYEVE+ H
Sbjct: 1   MELGLRLGDQQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLVCSSLELGLYEVEDHH 60

Query: 61  QGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYP-KQKVELARRLNL 120
           QGNSDRGCSRGSDEDDQILGSRKKLRL REQSAFLED FKDHHTL P KQK E+ARRLNL
Sbjct: 61  QGNSDRGCSRGSDEDDQILGSRKKLRLFREQSAFLEDCFKDHHTLDPQKQKAEVARRLNL 120

Query: 121 RPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFM 180
           RPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQ+NRKLRKELQDLRALKTTDSLFM
Sbjct: 121 RPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQENRKLRKELQDLRALKTTDSLFM 180

Query: 181 HSPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSS 216
           HSPATTLTMCASCERAA++ P+NSKASGFSFT+NGSS
Sbjct: 181 HSPATTLTMCASCERAALIQPVNSKASGFSFTSNGSS 216

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BLAST of Carg07305 vs. NCBI nr
Match: XP_010036498.1 (PREDICTED: homeobox-leucine zipper protein HOX11 [Eucalyptus grandis] >KCW48112.1 hypothetical protein EUGRSUZ_K01847 [Eucalyptus grandis])

HSP 1 Score: 203.0 bits (515), Expect = 1.0e-48
Identity = 101/144 (70.14%), Postives = 126/144 (87.50%), Query Frame = 0


Query: 52  GLYEVEEHQGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVE 111
           G ++  + +G+++R CSRGSD+DD  L +RKKLRLS+EQSAFLE+SFK+H+TL PKQK+ 
Sbjct: 171 GSHKRVDMEGDNERDCSRGSDDDDNGL-TRKKLRLSKEQSAFLEESFKEHNTLNPKQKLA 230

Query: 112 LARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALK 171
           LA++LNLRPRQVEVWFQNRRARTKLKQTE+DCEYLK CC+TLT++NR+L+KELQ+LRALK
Sbjct: 231 LAKQLNLRPRQVEVWFQNRRARTKLKQTEIDCEYLKRCCETLTEENRRLQKELQELRALK 290

Query: 172 TTDSLFMHSPATTLTMCASCERAA 196
           T+   +M  PATTLTMC SCER A
Sbjct: 291 TSQPFYMQLPATTLTMCPSCERVA 313

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BLAST of Carg07305 vs. NCBI nr
Match: XP_022954327.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita moschata])

HSP 1 Score: 202.6 bits (514), Expect = 1.4e-48
Identity = 119/212 (56.13%), Postives = 144/212 (67.92%), Query Frame = 0


Query: 28  PTPTPDGGGGE----SPRNPYLCSSLELGLY-----------EVEEHQGNSDRGCSRGSD 87
           P P+ +   GE    SP +      +E GLY           ++E     S+R  SR SD
Sbjct: 95  PWPSSENDEGEDRTASPNSAASSFQMEFGLYGGGGNISCQREQMENGVIESERASSRASD 154

Query: 88  EDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRA 147
           ED+    +RKKLRLS+EQSAFLE+SFK+H+TL PKQK+ LA++LNLRPRQVEVWFQNRRA
Sbjct: 155 EDEN-GSTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRA 214

Query: 148 RTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCE 207
           RTKLKQTEVDCEYLK CC+TLT++NR+L+KELQ+LRALKTTDS +M  PATTLTMC SCE
Sbjct: 215 RTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTDSFYMQLPATTLTMCPSCE 274

Query: 208 RAAVLHPLN---------SKASGFSFTTNGSS 216
           R       +         SK SGF+ T   SS
Sbjct: 275 RVTSTSAGSSGGKSTEAVSKRSGFAITGRPSS 305

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BLAST of Carg07305 vs. TAIR10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana)

HSP 1 Score: 185.7 bits (470), Expect = 3.1e-47
Identity = 98/157 (62.42%), Postives = 120/157 (76.43%), Query Frame = 0


Query: 64  DRGCSRGS--DEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPR 123
           +R  SR S  D DD+   +RKKLRLS++QSAFLEDSFK+H TL PKQK+ LA++LNLRPR
Sbjct: 170 ERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPR 229

Query: 124 QVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSP 183
           QVEVWFQNRRARTKLKQTEVDCEYLK CC++LT++NR+L+KE+++LR LKT+   +M  P
Sbjct: 230 QVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQLP 289

Query: 184 ATTLTMCASCERAA--VLHPLNSKASGFSFTTNGSSP 217
           ATTLTMC SCER A     P  S A     +T+   P
Sbjct: 290 ATTLTMCPSCERVATSAAQPSTSAAHNLCLSTSSLIP 326

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BLAST of Carg07305 vs. TAIR10
Match: AT4G37790.1 (Homeobox-leucine zipper protein family)

HSP 1 Score: 179.1 bits (453), Expect = 2.9e-45
Identity = 94/140 (67.14%), Postives = 115/140 (82.14%), Query Frame = 0


Query: 57  EEHQGNSDR-GCSRGSD--EDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELA 116
           EE +  ++R  CSR SD  +D++ + +RKKLRL+++QSA LED+FK H TL PKQK  LA
Sbjct: 98  EEAEETTERVVCSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALA 157

Query: 117 RRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTT 176
           R+LNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK CC+TLT +NR+L+KELQDL+ALK +
Sbjct: 158 RQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLS 217

Query: 177 DSLFMHSPATTLTMCASCER 194
              +MH PA TLTMC SCER
Sbjct: 218 QPFYMHMPAATLTMCPSCER 237

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BLAST of Carg07305 vs. TAIR10
Match: AT2G22800.1 (Homeobox-leucine zipper protein family)

HSP 1 Score: 171.4 bits (433), Expect = 6.1e-43
Identity = 83/121 (68.60%), Postives = 102/121 (84.30%), Query Frame = 0


Query: 73  EDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRA 132
           ED++ + +RKKLRL+++QSA LE+SFKDH TL PKQK  LAR+LNLRPRQVEVWFQNRRA
Sbjct: 104 EDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRA 163

Query: 133 RTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCE 192
           RTKLKQTEVDCE+LK CC+TL  +N +L+KE+Q+L+ LK T   +MH PA+TLT C SCE
Sbjct: 164 RTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTLTKCPSCE 223

Query: 193 R 194
           R
Sbjct: 224 R 224

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BLAST of Carg07305 vs. TAIR10
Match: AT4G16780.1 (homeobox protein 2)

HSP 1 Score: 168.7 bits (426), Expect = 4.0e-42
Identity = 94/174 (54.02%), Postives = 120/174 (68.97%), Query Frame = 0


Query: 27  PPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQGNSDRGCSRGSDEDDQILGSRKKLRL 86
           PP+    G       +P    S   G  +  E + ++D   SRG  +D+    SRKKLRL
Sbjct: 76  PPSTAEYGDEDAGVSSPNSTVSSSTG--KRSEREEDTDPQGSRGISDDEDGDNSRKKLRL 135

Query: 87  SREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL 146
           S++QSA LE++FKDH TL PKQK  LA++L LR RQVEVWFQNRRARTKLKQTEVDCE+L
Sbjct: 136 SKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFL 195

Query: 147 KNCCQTLTQQNRKLRKELQDLRALKTTDSLFMH-SPATTLTMCASCERAAVLHP 200
           + CC+ LT++NR+L+KE+ +LRALK +   +MH SP TTLTMC SCE  +V  P
Sbjct: 196 RRCCENLTEENRRLQKEVTELRALKLSPQFYMHMSPPTTLTMCPSCEHVSVPPP 247

[Close]

BLAST of Carg07305 vs. TAIR10
Match: AT5G47370.1 (Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-39
Identity = 84/133 (63.16%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 64  DRGCSRGSDEDDQILG--SRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPR 123
           DRG SRG+ ++++  G  SRKKLRLS++QSAFLE++FK+H+TL PKQK+ LA++LNL  R
Sbjct: 110 DRGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTAR 169

Query: 124 QVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLF-MHS 183
           QVEVWFQNRRARTKLKQTEVDCEYLK C + LT++NR+L+KE  +LR LK +   +   +
Sbjct: 170 QVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMT 229

Query: 184 PATTLTMCASCER 194
           P TTL MC SCER
Sbjct: 230 PPTTLIMCPSCER 242

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BLAST of Carg07305 vs. Swiss-Prot
Match: sp|P46665|HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 PE=2 SV=3)

HSP 1 Score: 185.7 bits (470), Expect = 5.6e-46
Identity = 98/157 (62.42%), Postives = 120/157 (76.43%), Query Frame = 0


Query: 64  DRGCSRGS--DEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPR 123
           +R  SR S  D DD+   +RKKLRLS++QSAFLEDSFK+H TL PKQK+ LA++LNLRPR
Sbjct: 170 ERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPR 229

Query: 124 QVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSP 183
           QVEVWFQNRRARTKLKQTEVDCEYLK CC++LT++NR+L+KE+++LR LKT+   +M  P
Sbjct: 230 QVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQLP 289

Query: 184 ATTLTMCASCERAA--VLHPLNSKASGFSFTTNGSSP 217
           ATTLTMC SCER A     P  S A     +T+   P
Sbjct: 290 ATTLTMCPSCERVATSAAQPSTSAAHNLCLSTSSLIP 326

[Close]

BLAST of Carg07305 vs. Swiss-Prot
Match: sp|P46604|HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana OX=3702 GN=HAT22 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.3e-44
Identity = 94/140 (67.14%), Postives = 115/140 (82.14%), Query Frame = 0


Query: 57  EEHQGNSDR-GCSRGSD--EDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELA 116
           EE +  ++R  CSR SD  +D++ + +RKKLRL+++QSA LED+FK H TL PKQK  LA
Sbjct: 98  EEAEETTERVVCSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALA 157

Query: 117 RRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTT 176
           R+LNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK CC+TLT +NR+L+KELQDL+ALK +
Sbjct: 158 RQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLS 217

Query: 177 DSLFMHSPATTLTMCASCER 194
              +MH PA TLTMC SCER
Sbjct: 218 QPFYMHMPAATLTMCPSCER 237

[Close]

BLAST of Carg07305 vs. Swiss-Prot
Match: sp|A2YW03|HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=HOX27 PE=2 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 1.0e-42
Identity = 86/111 (77.48%), Postives = 98/111 (88.29%), Query Frame = 0


Query: 85  RLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCE 144
           RLS+EQSAFLE+SFK+H TL PKQKV LA++LNLRPRQVEVWFQNRRARTKLKQTEVDCE
Sbjct: 177 RLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 236

Query: 145 YLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCERAA 196
           YLK CC+TLT++NR+L KEL +LRALKT    +MH PATTL+MC SCER A
Sbjct: 237 YLKRCCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCERVA 287

[Close]

BLAST of Carg07305 vs. Swiss-Prot
Match: sp|Q6YPD0|HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX27 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.0e-42
Identity = 86/111 (77.48%), Postives = 98/111 (88.29%), Query Frame = 0


Query: 85  RLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCE 144
           RLS+EQSAFLE+SFK+H TL PKQKV LA++LNLRPRQVEVWFQNRRARTKLKQTEVDCE
Sbjct: 177 RLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 236

Query: 145 YLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCERAA 196
           YLK CC+TLT++NR+L KEL +LRALKT    +MH PATTL+MC SCER A
Sbjct: 237 YLKRCCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCERVA 287

[Close]

BLAST of Carg07305 vs. Swiss-Prot
Match: sp|A2Z1U1|HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=HOX11 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-42
Identity = 85/111 (76.58%), Postives = 99/111 (89.19%), Query Frame = 0


Query: 85  RLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCE 144
           RLS+EQSAFLE+SFK+H TL PKQK+ LA++LNLRPRQVEVWFQNRRARTKLKQTEVDCE
Sbjct: 93  RLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 152

Query: 145 YLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCERAA 196
           YLK CC+TLT++NR+L+KEL +LRALKT    +MH PATTL+MC SCER A
Sbjct: 153 YLKRCCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVA 203

[Close]

BLAST of Carg07305 vs. TrEMBL
Match: tr|A0A059A1W8|A0A059A1W8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K01847 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.9e-49
Identity = 101/144 (70.14%), Postives = 126/144 (87.50%), Query Frame = 0


Query: 52  GLYEVEEHQGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVE 111
           G ++  + +G+++R CSRGSD+DD  L +RKKLRLS+EQSAFLE+SFK+H+TL PKQK+ 
Sbjct: 171 GSHKRVDMEGDNERDCSRGSDDDDNGL-TRKKLRLSKEQSAFLEESFKEHNTLNPKQKLA 230

Query: 112 LARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALK 171
           LA++LNLRPRQVEVWFQNRRARTKLKQTE+DCEYLK CC+TLT++NR+L+KELQ+LRALK
Sbjct: 231 LAKQLNLRPRQVEVWFQNRRARTKLKQTEIDCEYLKRCCETLTEENRRLQKELQELRALK 290

Query: 172 TTDSLFMHSPATTLTMCASCERAA 196
           T+   +M  PATTLTMC SCER A
Sbjct: 291 TSQPFYMQLPATTLTMCPSCERVA 313

[Close]

BLAST of Carg07305 vs. TrEMBL
Match: tr|A0A2I0IFX3|A0A2I0IFX3_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_036690 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48
Identity = 107/172 (62.21%), Postives = 131/172 (76.16%), Query Frame = 0


Query: 31  TPDGGGGESPRNPYLCSSLELGLYEVEEHQGN-------SDRGCSRGSDEDDQILGSRKK 90
           T DGG   SP +      +E G+      +GN       ++R  SRGSD+D+  L +RKK
Sbjct: 119 TDDGGAHSSPNSAVSSFHMEFGISSGSGGRGNKRDLEADAERDGSRGSDDDENGL-TRKK 178

Query: 91  LRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDC 150
           LRLS+EQSAFLE+SFK+H TL PKQK+ LA++LNLRPRQVEVWFQNRRARTKLKQTE+DC
Sbjct: 179 LRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEIDC 238

Query: 151 EYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCERAA 196
           EYLK CC+TLT++NR+L+KELQ+LRALKT+   +M  PATTLTMC SCER A
Sbjct: 239 EYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVA 289

[Close]

BLAST of Carg07305 vs. TrEMBL
Match: tr|A0A1S3CEP0|A0A1S3CEP0_CUCME (homeobox-leucine zipper protein HOX11-like OS=Cucumis melo OX=3656 GN=LOC103499889 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.5e-48
Identity = 112/185 (60.54%), Postives = 134/185 (72.43%), Query Frame = 0


Query: 28  PTPTPDGGGGE----SPRNPYLCSSLELGLY---------------EVEEHQGNSDRGCS 87
           P P+ +   GE    SP +      +E GLY                V    G S+R  S
Sbjct: 95  PWPSSENDEGEDRTASPNSAASSFQMEFGLYGSGGNISCRRDQMENGVMNEVGESERASS 154

Query: 88  RGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQ 147
           R SDED+    +RKKLRLS+EQSAFLE+SFK+H+TL PKQK+ LA++LNLRPRQVEVWFQ
Sbjct: 155 RASDEDENGC-TRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQ 214

Query: 148 NRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMC 194
           NRRARTKLKQTEVDCEYLK CC+TLT++NR+L+KELQ+LRALKTT+SL+M  PATTLTMC
Sbjct: 215 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSLYMQLPATTLTMC 274

[Close]

BLAST of Carg07305 vs. TrEMBL
Match: tr|A0A0A0KBJ3|A0A0A0KBJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429520 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.4e-48
Identity = 112/185 (60.54%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 28  PTPTPDGGGGE----SPRNPYLCSSLELGLY---------------EVEEHQGNSDRGCS 87
           P P+ +   GE    SP +      +E GLY                V    G S+R  S
Sbjct: 95  PWPSSENDEGEDRTASPNSAASSFQMEFGLYGSGGNISSRRDQMENGVMNEVGESERASS 154

Query: 88  RGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQ 147
           R SDED+    +RKKLRLS+EQSAFLE+SFK+H+TL PKQK  LA++LNLRPRQVEVWFQ
Sbjct: 155 RASDEDENGC-TRKKLRLSKEQSAFLEESFKEHNTLNPKQKQALAKQLNLRPRQVEVWFQ 214

Query: 148 NRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMC 194
           NRRARTKLKQTEVDCEYLK CC+TLT++NR+L+KELQ+LRALKTT+SL+M  PATTLTMC
Sbjct: 215 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSLYMQLPATTLTMC 274

[Close]

BLAST of Carg07305 vs. TrEMBL
Match: tr|G7IJ30|G7IJ30_MEDTR (Homeobox associated leucine zipper protein OS=Medicago truncatula OX=3880 GN=11440706 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.5e-48
Identity = 105/163 (64.42%), Postives = 126/163 (77.30%), Query Frame = 0


Query: 55  EVEEHQGNSDRGCSRGSDEDDQ--ILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVEL 114
           E  + +G   R  SR SDEDD   +  +RKKLRLS++QSAFLE+SFK+HHTL PKQK+ L
Sbjct: 171 EFSDGEGYDQRNSSRVSDEDDNCGVRNTRKKLRLSKDQSAFLEESFKEHHTLNPKQKLAL 230

Query: 115 ARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKT 174
           A++LNLRPRQVEVWFQNRRARTKLKQTEVDCEYLK CC+TLT++NR+L KELQ+LRALKT
Sbjct: 231 AKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKT 290

Query: 175 TDSLFMHSPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSS 216
           ++   M  PATTLTMC SCER A      S  +  S T NG++
Sbjct: 291 SNPFNMQLPATTLTMCPSCERVATNSTATSSVTNTSATINGNN 333

The following BLAST results are available for this feature:

BLAST of Carg07305 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949216.1	2.4e-117	99.08	homeobox-leucine zipper protein HOX11-like [Cucurbita moschata]	[more]
XP_023525421.1	1.0e-104	88.60	homeobox-leucine zipper protein HOX11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998494.1	2.5e-82	78.34	homeobox-leucine zipper protein HOX11-like [Cucurbita maxima]	[more]
XP_010036498.1	1.0e-48	70.14	PREDICTED: homeobox-leucine zipper protein HOX11 [Eucalyptus grandis] >KCW48112....	[more]
XP_022954327.1	1.4e-48	56.13	homeobox-leucine zipper protein HOX11-like [Cucurbita moschata]	[more]

BLAST of Carg07305 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06710.1	3.1e-47	62.42	homeobox from Arabidopsis thaliana	[more]
AT4G37790.1	2.9e-45	67.14	Homeobox-leucine zipper protein family	[more]
AT2G22800.1	6.1e-43	68.60	Homeobox-leucine zipper protein family	[more]
AT4G16780.1	4.0e-42	54.02	homeobox protein 2	[more]
AT5G47370.1	1.1e-39	63.16	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]

BLAST of Carg07305 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P46665\|HAT14_ARATH	5.6e-46	62.42	Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 P...	[more]
sp\|P46604\|HAT22_ARATH	5.3e-44	67.14	Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana OX=3702 GN=HAT22 P...	[more]
sp\|A2YW03\|HOX27_ORYSI	1.0e-42	77.48	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
sp\|Q6YPD0\|HOX27_ORYSJ	1.0e-42	77.48	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
sp\|A2Z1U1\|HOX11_ORYSI	1.3e-42	76.58	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of Carg07305 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A059A1W8\|A0A059A1W8_EUCGR	6.9e-49	70.14	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K01847 PE=4 SV...	[more]
tr\|A0A2I0IFX3\|A0A2I0IFX3_PUNGR	1.2e-48	62.21	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_036690 PE=4 SV=1	[more]
tr\|A0A1S3CEP0\|A0A1S3CEP0_CUCME	1.5e-48	60.54	homeobox-leucine zipper protein HOX11-like OS=Cucumis melo OX=3656 GN=LOC1034998...	[more]
tr\|A0A0A0KBJ3\|A0A0A0KBJ3_CUCSA	3.4e-48	60.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429520 PE=4 SV=1	[more]
tr\|G7IJ30\|G7IJ30_MEDTR	4.5e-48	64.42	Homeobox associated leucine zipper protein OS=Medicago truncatula OX=3880 GN=114...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017970	Homeobox_CS
IPR003106	Leu_zip_homeo
IPR001356	Homeobox_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07305-RA	Carg07305-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 150..173
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 85..135 e-value: 5.6E-18 score: 66.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 57..204
None	No IPR available	PANTHER	PTHR24326:SF514	HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1-RELATED	coord: 57..204
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 79..141 e-value: 3.0E-15 score: 66.7
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 81..135 e-value: 6.5E-15 score: 54.6
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 77..137 score: 16.277
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 81..138 e-value: 8.26894E-15 score: 64.9572
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 137..180 e-value: 3.6E-19 score: 79.7
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 137..171 e-value: 4.7E-9 score: 36.2
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 112..135
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 74..138

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07305	Cla017237	Watermelon (97103) v1	carwmB0759
Carg07305	Csa3G702640	Cucumber (Chinese Long) v2	carcuB0779
Carg07305	MELO3C023937	Melon (DHL92) v3.5.1	carmeB0755
Carg07305	ClCG10G012670	Watermelon (Charleston Gray)	carwcgB0738
Carg07305	CSPI03G30010	Wild cucumber (PI 183967)	carcpiB0797
Carg07305	Cucsa.177570	Cucumber (Gy14) v1	carcgyB0858
Carg07305	CmaCh01G002070	Cucurbita maxima (Rimu)	carcmaB1059
Carg07305	CmoCh01G002170	Cucurbita moschata (Rifu)	carcmoB1033
Carg07305	Cp4.1LG02g15420	Cucurbita pepo (Zucchini)	carcpeB1072
Carg07305	CsGy3G027810	Cucumber (Gy14) v2	carcgybB0756
Carg07305	MELO3C023937.2	Melon (DHL92) v3.6.1	carmedB0770
Carg07305	CsaV3_3G032480	Cucumber (Chinese Long) v3	carcucB0800
Carg07305	Cla97C10G195530	Watermelon (97103) v2	carwmbB0794
Carg07305	Bhi11G001218	Wax gourd	carwgoB0894
Carg07305	Bhi09G000487	Wax gourd	carwgoB0898

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07305	Carg18702	Silver-seed gourd	carcarB382
Carg07305	Carg13470	Silver-seed gourd	carcarB453

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07305	Silver-seed gourd	carcarB605
Carg07305	Cucurbita maxima (Rimu)	carcmaB1057
Carg07305	Cucurbita moschata (Rifu)	carcmoB1031
Carg07305	Cucurbita moschata (Rifu)	carcmoB1032
Carg07305	Cucurbita pepo (Zucchini)	carcpeB1073
Carg07305	Bottle gourd (USVL1VR-Ls)	carlsiB697
Carg07305	Bottle gourd (USVL1VR-Ls)	carlsiB699