Carg13421 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTACTTCCTACATTACATTCAAGCGTGCATGAGAGATTGGGATGTAATTACTTTGCAATTCTGATATTAGCTTGTTTACGCTCTCATGTTTTCTGCAATTCCAGGTTATGAGACTTTGGTCGTCGGAGAACTTCAGATGTCTGGAAGAATATTCCATTCCGGAGAAACTGCCTCTAATTGACTTTGATTTTGATGAGAGCAAGGTAATATCAATATATCTCTTATAAGTATGCTGATGTTTTTGCTACTCGTCTAGAAAACTTTTGACAAAGCATGCTATTACTATATGAAAAGGTGAGTAGATGCATTCCTTCCTTTTCATCAGTTACTAAGCACTTTTTTGGGTGGAATTCTGAACCTTATTATTTCCCAATAGAGAACTGATATTTGCCAAATGAAATCTAATTTCTCAAGCCATTGTCTTGTCCTAGATTGTTGGTTTGGTTGGTAGAAACTTGTGCATTTGGAGTCGGAGTGGGAAACGAAGTATATTTCCTTCGCGTGAATGTACGTTTGTGGAGGGTTCATGTATGCGGTAAGTGGAAATACCTCCATAAATTTCTATCTGTTTTCAAAACTAACTTGTTTAACATCAATTTCTTTTTAATTACGTTTTAAACATTTTAATTTATCCATATATTTTCGTACTTATATTGATTTTGTCCTGTAATTTAACTTATCAATCCAATAGTCTCTGGTACACCAGTTTATGTTTATAATATGAAAGAATGATTGTCATTGCAGCCTTGGTCCACAGTCATTTGTAGACTTGAAGCGATTCTTCTCAATTTGTTTTCAATTAATTTGTATAATGAATCTTCCAATCCTGCTTACAGTTACTTTGATCCGGAGGCTGTTGTTGGTTGTGGAGATGGAACAGCTCATGTATTCGACATGTATAGTAGGAGATGCTCTAGAATTGTCAGGTAAACCAGAAGAAATATAAATGACATGACACTTCTCCTTCACCTGTTCTTTGGACTGAGGTTATTGACAGAAGTTTCGGCAATGACCGAACAGACGAGGAACAACCATTAGAAGTTGAGTTGGTGAAAATAACGTCACACAAATTTGATATTCATTACTTTTTCTTTCACCATGCACACAAACACTCGTGCTGACATTTTCACATTAGAATAAAAAGAGAGATCCATTTTGGTACGAACCAAAGGTTAATGGAAAACTAATTTTCAGGATTTATTATTACTTGTTTAGTTTTATGTAATTTCCTAAATGGTTGACATATCATGCACTTCTATCTTGACTTTTGTACCAATTTTGTTAATTTTACATTGCAGGATGCTTCCTGGGCCAGTGACATGCTTATGTGTGGGTGATGATCAGCTCATACTTGGGGGTTCCCTTCATGGAAACATTGGAGTATCGGGTCTTCGGTCTGATCAGCGGGTAGCAATGCTTAGATCAAGAAATACCATAGGTCATGCATATGGCAGTCTTACTTTTGCACCTTTCTCTTCTCCTTGTCTCGTCGTTTAAAAATTTTCTCTGTCTCGGACTTTCTGAATCAAATATAACACGATAAATCGTCCTCTGAATTAGAGACAAGAATAGAAGCAACTCAAGCAGTGTAGTTTAACATCTGAAGTAAACAAACAGTCTCAAGTAGTTTGCATATAGCTAATCTAACCGTCCTTCTCAAAGCACTTAAAAAAAATTCTTTTCAACTAGAGAACATTTATAGATTTCCTTGTGGTTAGTTCGTTCCCTTCGTGTACATATATCGAAAAGTAATTCCTTTCCACTCAGATTTGTTTTAGTGTATATTTTATTACAATTTCTGCTTGCAGGCATAAAGACCATGTGTTACAATGCTTCTTCACATTTAGTCTTTGCGGGATCAACTGCCGGACATGTCTATTGTTGGGACCTCAGGTAAGTAAAAAGTAATTTAGATGTAACTTCAGTAAATTGGTCTGGTCACTGATGGTATCCAACAAAAACAATAAGTTAATGGAAGATAGCTTCAGGCCCAGAAATGAATAGCTTTAACCAACATTGAATTTCCATTGCTGTTTGAATACTGAAACAAAATGAAATTATTTACTTCCGAAGGGAAGAAAAGTTCTGATTTTACAATTCTTGCTGTCTATGATGTTCTAAATTCGGACCGTGTCATTTATTTATTTACTGCTTTAGTCCCTTTCTTCAAATTATATTCTCTAATTGAGCTCTGCACATTTCTTAGGACAATGAAACCTTTATGGGAATCCCGAGTGAGCCCAAATGTCGTATATTCTTTACGACACCTCCAAAATGACAGGTCAAGTTTGGCTGTTGGTGGAATAGATGGCATTCTACGTATTTTGGATCAGAATACAGGCACGGTGCGGTCGGGTTGTATTGTGGATAGTAGACTGTTATCGACGTATCAGAGCGGGGTTGGAGTCGTGGAAGAAAGGATAGGAAATAGACTGTCAGATGAAACTCCTATTGATGCCATACACAGAAGGAGTAGGCCTCCGATCACAAGCTTAGCCGTTGGGATGAACAAGATAGTCACAACGCACAACGACAAGTTCATTAGATTATGGAAGTTCCGAAACTAGTCTTTCCCCAGGCTGGGATTCATGGTTCTTTGTTTTGCTCTTATTTACTGTACATATTTTCGTAACTTCTTTTTTTCTTTTTGTGGATGAATTTTGTGGTCAGCAATGTGGAATTATGTAGATAGAACGTTTGATTTCCAGTGAACTTTCTAGGTTACAATCCACTGGATGGGGATAATATTTTGGGTTCTTTTTAGTATTAATACTATTTTAGCTCCTAAGATTCTTCTTTATATATATACATGTATACATGTATGTATGTGTATGTATGTAGATATATGTGTATGTATGTATGTGTATGTGTG ATGGAGTACTTCCTACATTACATTCAAGCGTGCATGAGAGATTGGGATGTTATGAGACTTTGGTCGTCGGAGAACTTCAGATGTCTGGAAGAATATTCCATTCCGGAGAAACTGCCTCTAATTGACTTTGATTTTGATGAGAGCAAGATTGTTGGTTTGGTTGGTAGAAACTTGTGCATTTGGAGTCGGAGTGGGAAACGAAGTATATTTCCTTCGCGTGAATGTACGTTTGTGGAGGGTTCATGTATGCGTTACTTTGATCCGGAGGCTGTTGTTGGTTGTGGAGATGGAACAGCTCATGTATTCGACATGTATAGTAGGAGATGCTCTAGAATTGTCAGGATGCTTCCTGGGCCAGTGACATGCTTATGTGTGGGTGATGATCAGCTCATACTTGGGGGTTCCCTTCATGGAAACATTGGAGTATCGGGTCTTCGGTCTGATCAGCGGGTAGCAATGCTTAGATCAAGAAATACCATAGGCATAAAGACCATGTGTTACAATGCTTCTTCACATTTAGTCTTTGCGGGATCAACTGCCGGACATGTCTATTGTTGGGACCTCAGGACAATGAAACCTTTATGGGAATCCCGAGTGAGCCCAAATGTCGTATATTCTTTACGACACCTCCAAAATGACAGGTCAAGTTTGGCTGTTGGTGGAATAGATGGCATTCTACGTATTTTGGATCAGAATACAGGCACGGTGCGGTCGGGTTGTATTGTGGATAGTAGACTGTTATCGACGTATCAGAGCGGGGTTGGAGTCGTGGAAGAAAGGATAGGAAATAGACTGTCAGATGAAACTCCTATTGATGCCATACACAGAAGGAGTAGGCCTCCGATCACAAGCTTAGCCGTTGGGATGAACAAGATAGTCACAACGCACAACGACAAGTTCATTAGATTATGGAAGTTCCGAAACTAGTCTTTCCCCAGGCTGGGATTCATGGTTCTTTGTTTTGCTCTTATTTACTGTACATATTTTCGTAACTTCTTTTTTTCTTTTTGTGGATGAATTTTGTGGTCAGCAATGTGGAATTATGTAGATAGAACGTTTGATTTCCAGTGAACTTTCTAGGTTACAATCCACTGGATGGGGATAATATTTTGGGTTCTTTTTAGTATTAATACTATTTTAGCTCCTAAGATTCTTCTTTATATATATACATGTATACATGTATGTATGTGTATGTATGTAGATATATGTGTATGTATGTATGTGTATGTGTG ATGGAGTACTTCCTACATTACATTCAAGCGTGCATGAGAGATTGGGATGTTATGAGACTTTGGTCGTCGGAGAACTTCAGATGTCTGGAAGAATATTCCATTCCGGAGAAACTGCCTCTAATTGACTTTGATTTTGATGAGAGCAAGATTGTTGGTTTGGTTGGTAGAAACTTGTGCATTTGGAGTCGGAGTGGGAAACGAAGTATATTTCCTTCGCGTGAATGTACGTTTGTGGAGGGTTCATGTATGCGTTACTTTGATCCGGAGGCTGTTGTTGGTTGTGGAGATGGAACAGCTCATGTATTCGACATGTATAGTAGGAGATGCTCTAGAATTGTCAGGATGCTTCCTGGGCCAGTGACATGCTTATGTGTGGGTGATGATCAGCTCATACTTGGGGGTTCCCTTCATGGAAACATTGGAGTATCGGGTCTTCGGTCTGATCAGCGGGTAGCAATGCTTAGATCAAGAAATACCATAGGCATAAAGACCATGTGTTACAATGCTTCTTCACATTTAGTCTTTGCGGGATCAACTGCCGGACATGTCTATTGTTGGGACCTCAGGACAATGAAACCTTTATGGGAATCCCGAGTGAGCCCAAATGTCGTATATTCTTTACGACACCTCCAAAATGACAGGTCAAGTTTGGCTGTTGGTGGAATAGATGGCATTCTACGTATTTTGGATCAGAATACAGGCACGGTGCGGTCGGGTTGTATTGTGGATAGTAGACTGTTATCGACGTATCAGAGCGGGGTTGGAGTCGTGGAAGAAAGGATAGGAAATAGACTGTCAGATGAAACTCCTATTGATGCCATACACAGAAGGAGTAGGCCTCCGATCACAAGCTTAGCCGTTGGGATGAACAAGATAGTCACAACGCACAACGACAAGTTCATTAGATTATGGAAGTTCCGAAACTAG MEYFLHYIQACMRDWDVMRLWSSENFRCLEEYSIPEKLPLIDFDFDESKIVGLVGRNLCIWSRSGKRSIFPSRECTFVEGSCMRYFDPEAVVGCGDGTAHVFDMYSRRCSRIVRMLPGPVTCLCVGDDQLILGGSLHGNIGVSGLRSDQRVAMLRSRNTIGIKTMCYNASSHLVFAGSTAGHVYCWDLRTMKPLWESRVSPNVVYSLRHLQNDRSSLAVGGIDGILRILDQNTGTVRSGCIVDSRLLSTYQSGVGVVEERIGNRLSDETPIDAIHRRSRPPITSLAVGMNKIVTTHNDKFIRLWKFRN
BLAST of Carg13421 vs. NCBI nr
Match: XP_022960484.1 (F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucurbita moschata]) HSP 1 Score: 606.7 bits (1563), Expect = 4.4e-170 Identity = 291/292 (99.66%), Postives = 292/292 (100.00%), Query Frame = 0
BLAST of Carg13421 vs. NCBI nr
Match: XP_022960485.1 (F-box/WD-40 repeat-containing protein At3g52030 isoform X2 [Cucurbita moschata]) HSP 1 Score: 606.7 bits (1563), Expect = 4.4e-170 Identity = 291/292 (99.66%), Postives = 292/292 (100.00%), Query Frame = 0
BLAST of Carg13421 vs. NCBI nr
Match: XP_023513732.1 (F-box/WD-40 repeat-containing protein At3g52030 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 606.7 bits (1563), Expect = 4.4e-170 Identity = 291/292 (99.66%), Postives = 292/292 (100.00%), Query Frame = 0
BLAST of Carg13421 vs. NCBI nr
Match: XP_023513731.1 (F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 606.7 bits (1563), Expect = 4.4e-170 Identity = 291/292 (99.66%), Postives = 292/292 (100.00%), Query Frame = 0
BLAST of Carg13421 vs. NCBI nr
Match: XP_023004546.1 (F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucurbita maxima]) HSP 1 Score: 605.9 bits (1561), Expect = 7.6e-170 Identity = 290/292 (99.32%), Postives = 292/292 (100.00%), Query Frame = 0
BLAST of Carg13421 vs. TAIR10
Match: AT3G52030.1 (F-box family protein with WD40/YVTN repeat doamin) HSP 1 Score: 326.6 bits (836), Expect = 1.6e-89 Identity = 163/313 (52.08%), Postives = 212/313 (67.73%), Query Frame = 0
BLAST of Carg13421 vs. Swiss-Prot
Match: sp|Q9SV01|FBW4_ARATH (F-box/WD-40 repeat-containing protein At3g52030 OS=Arabidopsis thaliana OX=3702 GN=At3g52030 PE=4 SV=2) HSP 1 Score: 326.6 bits (836), Expect = 2.9e-88 Identity = 163/313 (52.08%), Postives = 212/313 (67.73%), Query Frame = 0
BLAST of Carg13421 vs. TrEMBL
Match: tr|A0A0A0KBD6|A0A0A0KBD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420840 PE=4 SV=1) HSP 1 Score: 530.8 bits (1366), Expect = 2.1e-147 Identity = 248/292 (84.93%), Postives = 271/292 (92.81%), Query Frame = 0
BLAST of Carg13421 vs. TrEMBL
Match: tr|A0A1S3CEH9|A0A1S3CEH9_CUCME (F-box/WD-40 repeat-containing protein At3g52030 OS=Cucumis melo OX=3656 GN=LOC103499956 PE=4 SV=1) HSP 1 Score: 530.4 bits (1365), Expect = 2.7e-147 Identity = 252/292 (86.30%), Postives = 270/292 (92.47%), Query Frame = 0
BLAST of Carg13421 vs. TrEMBL
Match: tr|A0A2I4ECY0|A0A2I4ECY0_9ROSI (F-box/WD-40 repeat-containing protein At3g52030 OS=Juglans regia OX=51240 GN=LOC108988437 PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 4.0e-119 Identity = 199/291 (68.38%), Postives = 245/291 (84.19%), Query Frame = 0
BLAST of Carg13421 vs. TrEMBL
Match: tr|A0A2N9J669|A0A2N9J669_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59977 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 9.3e-116 Identity = 197/293 (67.24%), Postives = 242/293 (82.59%), Query Frame = 0
BLAST of Carg13421 vs. TrEMBL
Match: tr|A0A2P4JLC9|A0A2P4JLC9_QUESU (F-box/wd-40 repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_62411 PE=4 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 1.2e-115 Identity = 198/293 (67.58%), Postives = 242/293 (82.59%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |