Carg12369 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12369
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	GTP-binding protein Obg/CgtA
Location	Cucurbita_argyrosperma_scaffold_074 : 607008 .. 609965 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATACAAAATTCTAATTTATTTTTATTAATTTAGGCTAAAAAAACCAAATTGTCACTCTTTTTCCTCCCTTGTACCCAGCCGCGCGCCAACCCCTTAGCGGTCGTACTCGTCCAGAAGCTACCCACTAGTCATCTTAGTAGACGGCGTCCTACCGGCCTGCTGCGACCACGAGCGGCGGGGAACGACGACCCTGCGCGTTTCCTCTTCCAGCGACTGATACTCCAAACGGAGACGCGAATCACCTGCGGTGCATCTGTCGGCGGCAGCGCTCCATTCTGAAATACCGGCACACTTCGCTTCTCTATCTCCGGTGATTCACGACGGTAGCACCCACGGCGAATAGCTGCGTGATCTCCTCCTAGAGACAAAATTTGAGCTAGGAGATAGTGAGCCATAACCCGAACGACACCCTGGATAGAACACCCATAGCCTTTAGGGTTCAAATCTACAAAATTGAACTCATTCGAACTCAATCCTGCAAAGACTCGAGCTTTACGGTAAGGATTAGTTGGAAATGGCTCGCTCTAAACTCTTTTTGGATTCCTTCAATGTTTAGGTTTGGACTGTTCGAGTTAAGTTTAATCTCTCACGAACGTCCTTCAATTTTGATTATGGTTTCTGAACTGAGTTGTAACCTTGGAACTTTGTCTTTCTTGTTTCAAGAATTGATAGAATAGCTTAGAAGCGATTTAAAATGTGTTGCAAGTAGTTTCTTCTTGTGGAGTTTGTATACCTTGTATGCTATGTATGCTGGATGCTTTGTTATACTTGTTTGATATGTGTGTTTTTATTTAATGTTATGTTGAACCCGATTGTATGTTTTGATGTGTTACGCTCATTAAGTTATTGTTTTGTGTTGATTAAGCATGTACTGATGTTGGTCCCTGCGTTAAAAGCATGTTCATGTGGTTATTAGGCTGGAAGCATGGTCTAGCAAGCATGTATAAGATGTGCATATCTGGGTTGTTTAGAGACTGATTGTTAAGTTGCGTATATTTGAGTTTGCAATCCAGGAAAGCGAGGACAATATAAGGATCTCGGGTGTAGATGGTCAAGGGTAGATATTATTTTAAGGAAATGAAAGTGAATATCAATGCCTCGAGTATAAATGGAGGTTAGGTATGTCGCTTTTTGGTGTCAAGGCTTTGGGTATAAATGATTGAGGGTCGATGCACAAGTATAAATGTCAAGGGTCAGTGATGAGTCTTAAGGTAAGTATTGGGGCCTTGGGAATAAATGGTCAAGGGTTGATGCACAGTTCAAGGCTTTGGGTATTAATGGTCTAGGGTCGAACGTCAATTTCTATAGAGAAGTGTTGAGACCATGTGTATAAATAGTGAGGTATAAATGGTCAAGGATTGGTGTGATGAGTCTTGTGGAGTCTGGACATAAATGGTCAATGATCAATGCACAGTTTGAGGCTTTGGGTATTAATGATCAAGGATCTGAATGTCGAGTTTCATAAAAGTGTTGAGGCCCCAAGTATAAATAGTCAAGGATTGATGCATCTCGAAGATGTGGGAAAGATTGATAAGAGCTTGGGAAGGGCTTGAGAGAGCTATAAAAAGTTTTAAGGATTCAATATTGTCTTGAGATAGAAGTTGAGCATGTATAATATGAGAATCATGCATGATATAATTTTGATAAGTGAGCATCACGCATATTACTTGGTTCCTCATGGTGAGAAGTATGATCTTATGATGTATGTTGTATGTCGTTTGGATGACTGACAAGAGCGTTTCTGTCCGGTACATGACTTTGGATGGCTGGCCCACTTGGGGAGACTTATATGGTTTTACCAAATTCCTGTTCTATGTTTTTCGTCGTTATATTACTTCTTGGGAACTCCGGATCATTTCTTGTTGACGCTGCTGGATTGACGAAAGTGTAACAGCCCAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGACTTTCCCTTAAGGTTCTTAAGACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAGTGTTTCGTTCTCCTCCTCAACCGATGTGGGATCTCACAGAAAGTCATTGTCCATTTTTCTGGTTGCAAAATAGTCATAACTAGCCATCTGTGTGTACTTTTGTTTTCCTGCTAATGTACAAAGACTAGTAGGTTTTATATCTTAAGTTATTTATTTATATATTATTACTTTTTACTGAAGCTTGCCATGGAATCTTTTCAATTGGAGTTGACCTCGCTCCCCTTATCGAAATCATAATTGTTCTTGCTTCAATTGATTGATATTTAAATTTTGTAGATCTCTTTATTCTAGTTCAAACTTTACAACTTTCCAAAGCATGGATGATGTTTGAGGCGCGAGAGAAGGGAGAACGATGAGGTTTTTGTGCGTAAAACAAGTTCTATATTTGAGAGGCTTGAGAGAAACCTCAAGTTTTCCATGGCTTTTTTCTGCCATTTCCTATTACTCAGATACTCCCTCAAAGAAGTCTAAACTTGCCCCTTTACAGGTTTTTCTTTACTTCTCTTCCATTTTTTCATTACTTTTTTCAATGCAAATTCTTCTACTCATGTTTGGATTTATTGGGTTCCACAGGAGAGGAGAATGATAGACAGGTTTATGATGTATGCCAAAGGAGGTGATGGTGGAAATGGATGCCATAGCACTCGCCGTAGTAGGCAGGATCGCCACGGCCAACCTGATGGTAGGCTTTATGTAATTATTTAATCTCTTAGAATGATAGTCAAGTAAGGAAGATCGAACGGTCCTCTTGGCGTGTATAATTAGGAACTGTTCCCCTTGTCATGAGATAGCTGCTTGACTCTACCACGACGCTTCCTTTCTAATTGATGCAGGTGGAAATGGTGGAAGGGGGGGCAATGTCATTCTTGAATGTTCCGCTGCTCTCTGGGACTTCAGCAGTTTGAAGCATCATATTGTATGTTCGACTCTTATACTCATGCTAGAAACAACTCGGAAATGA

mRNA sequence

AAAAATACAAAATTCTAATTTATTTTTATTAATTTAGGCTAAAAAAACCAAATTGTCACTCTTTTTCCTCCCTTGTACCCAGCCGCGCGCCAACCCCTTAGCGGTCGTACTCGTCCAGAAGCTACCCACTAGTCATCTTAGTAGACGGCGTCCTACCGGCCTGCTGCGACCACGAGCGGCGGGGAACGACGACCCTGCGCGTTTCCTCTTCCAGCGACTGATACTCCAAACGGAGACGCGAATCACCTGCGGTGCATCTGTCGGCGGCAGCGCTCCATTCTGAAATACCGGCACACTTCGCTTCTCTATCTCCGGTGATTCACGACGGTAGCACCCACGGCGAATAGCTGCGTGATCTCCTCCTAGAGACAAAATTTGAGCTAGGAGATAGTGAGCCATAACCCGAACGACACCCTGGATAGAACACCCATAGCCTTTAGGGTTCAAATCTACAAAATTGAACTCATTCGAACTCAATCCTGCAAAGACTCGAGCTTTACGATCTCTTTATTCTAGTTCAAACTTTACAACTTTCCAAAGCATGGATGATGTTTGAGGCGCGAGAGAAGGGAGAACGATGAGGTTTTTGTGCGTAAAACAAGTTCTATATTTGAGAGGCTTGAGAGAAACCTCAAGTTTTCCATGGCTTTTTTCTGCCATTTCCTATTACTCAGATACTCCCTCAAAGAAGTCTAAACTTGCCCCTTTACAGGAGAGGAGAATGATAGACAGGTTTATGATGTATGCCAAAGGAGGTGATGGTGGAAATGGATGCCATAGCACTCGCCGTAGTAGGCAGGATCGCCACGGCCAACCTGATGGTGGAAATGGTGGAAGGGGGGGCAATGTCATTCTTGAATGTTCCGCTGCTCTCTGGGACTTCAGCAGTTTGAAGCATCATATTGTATGTTCGACTCTTATACTCATGCTAGAAACAACTCGGAAATGA

Coding sequence (CDS)

ATGAGGTTTTTGTGCGTAAAACAAGTTCTATATTTGAGAGGCTTGAGAGAAACCTCAAGTTTTCCATGGCTTTTTTCTGCCATTTCCTATTACTCAGATACTCCCTCAAAGAAGTCTAAACTTGCCCCTTTACAGGAGAGGAGAATGATAGACAGGTTTATGATGTATGCCAAAGGAGGTGATGGTGGAAATGGATGCCATAGCACTCGCCGTAGTAGGCAGGATCGCCACGGCCAACCTGATGGTGGAAATGGTGGAAGGGGGGGCAATGTCATTCTTGAATGTTCCGCTGCTCTCTGGGACTTCAGCAGTTTGAAGCATCATATTGTATGTTCGACTCTTATACTCATGCTAGAAACAACTCGGAAATGA

Protein sequence

MRFLCVKQVLYLRGLRETSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDRFMMYAKGGDGGNGCHSTRRSRQDRHGQPDGGNGGRGGNVILECSAALWDFSSLKHHIVCSTLILMLETTRK

Homology

[Close]

BLAST of Carg12369 vs. NCBI nr
Match: XP_023522978.1 (probable GTP-binding protein OBGM, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 107/109 (98.17%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MRFLCVKQVLYLRGLRETSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDRFMMYAKGG 60
           MRFLCVKQVLYLRGLRE+SSFPWLFSAISY SDTPSKKSKLAPLQERRMIDRFMMYAKGG
Sbjct: 1   MRFLCVKQVLYLRGLRESSSFPWLFSAISYCSDTPSKKSKLAPLQERRMIDRFMMYAKGG 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHI 110
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHI
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHI 109

[Close]

BLAST of Carg12369 vs. NCBI nr
Match: XP_022997993.1 (probable GTP-binding protein OBGM, mitochondrial [Cucurbita maxima])

HSP 1 Score: 141.7 bits (356), Expect = 1.6e-30
Identity = 105/109 (96.33%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MRFLCVKQVLYLRGLRETSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDRFMMYAKGG 60
           MRFLCVKQVLYLRGLRE+SSFPWLFSAISYYSDTPS K+KLAPLQERRMIDRFM+YAKGG
Sbjct: 9   MRFLCVKQVLYLRGLRESSSFPWLFSAISYYSDTPS-KTKLAPLQERRMIDRFMVYAKGG 68

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHI 110
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHI
Sbjct: 69  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHI 116

[Close]

BLAST of Carg12369 vs. NCBI nr
Match: XP_022948603.1 (probable GTP-binding protein OBGM, mitochondrial [Cucurbita moschata])

HSP 1 Score: 140.2 bits (352), Expect = 4.7e-30
Identity = 106/117 (90.60%), Postives = 108/117 (92.31%), Query Frame = 0


Query: 1   MRFLCVK--------QVLYLRGLRETSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDR 60
           MRFLCV+         VLYLRGLRE+SSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDR
Sbjct: 1   MRFLCVRTMXXXXXXXVLYLRGLRESSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDR 60

Query: 61  FMMYAKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHI 110
           FMMYAKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHI
Sbjct: 61  FMMYAKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHI 117

[Close]

BLAST of Carg12369 vs. NCBI nr
Match: XP_004142409.1 (PREDICTED: probable GTP-binding protein OBGM, mitochondrial [Cucumis sativus] >KGN52306.1 hypothetical protein Csa_5G623700 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-28
Identity = 100/112 (89.29%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MRFLCVKQVLYLRGLRETSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDRFMMYAKGG 60
           MRFLCVK+VL+LRGLRE+SS PWLFSAISYYSDTP KKSKLAPLQERRMIDRF +YAKGG
Sbjct: 1   MRFLCVKRVLHLRGLRESSSCPWLFSAISYYSDTPKKKSKLAPLQERRMIDRFKVYAKGG 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHIVCS 113
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX VILECS ALWDFSSL HHI  S
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVILECSTALWDFSSLNHHINAS 112

[Close]

BLAST of Carg12369 vs. NCBI nr
Match: ADN34199.1 (mitochondrial GTPase [Cucumis melo subsp. melo])

HSP 1 Score: 131.3 bits (329), Expect = 2.2e-27
Identity = 98/112 (87.50%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MRFLCVKQVLYLRGLRETSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDRFMMYAKGG 60
           MRFLCVK+VL LRGLRE+SS PWLFSAISYYSD P KKSKLAPLQERRMIDRF +YAKGG
Sbjct: 1   MRFLCVKKVLRLRGLRESSSCPWLFSAISYYSDAPKKKSKLAPLQERRMIDRFKVYAKGG 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHIVCS 113
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX VILECS ALWDFS+L HHI  S
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVILECSTALWDFSTLNHHIKAS 112

[Close]

BLAST of Carg12369 vs. TAIR10
Match: AT1G07615.1 (GTP-binding protein Obg/CgtA)

HSP 1 Score: 71.6 bits (174), Expect = 3.7e-13
Identity = 66/101 (65.35%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 9   VLYLRGLRETSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDRFMMYAKGGXXXXXXXX 68
           V YL   +     PW+ + + +YSD   KK K+APLQE RM DRF +YA+GG XXXXXXX
Sbjct: 10  VRYLGSYKRPQKPPWMRNPVVFYSDFSEKKGKVAPLQETRMRDRFTLYARGGEXXXXXXX 69

Query: 69  XXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHI 110
           XXXXXXXXXXXXXXXXXXXXX VILEC+ A+WDFS L+ HI
Sbjct: 70  XXXXXXXXXXXXXXXXXXXXXDVILECTHAVWDFSGLQPHI 110

[Close]

BLAST of Carg12369 vs. Swiss-Prot
Match: sp|F4HSD4|OBGM_ARATH (Probable GTP-binding protein OBGM, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ATOBGM PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 6.7e-12
Identity = 66/101 (65.35%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 9   VLYLRGLRETSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDRFMMYAKGGXXXXXXXX 68
           V YL   +     PW+ + + +YSD   KK K+APLQE RM DRF +YA+GG XXXXXXX
Sbjct: 10  VRYLGSYKRPQKPPWMRNPVVFYSDFSEKKGKVAPLQETRMRDRFTLYARGGEXXXXXXX 69

Query: 69  XXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHI 110
           XXXXXXXXXXXXXXXXXXXXX VILEC+ A+WDFS L+ HI
Sbjct: 70  XXXXXXXXXXXXXXXXXXXXXDVILECTHAVWDFSGLQPHI 110

[Close]

BLAST of Carg12369 vs. Swiss-Prot
Match: sp|Q2QZ37|OBGM_ORYSJ (Probable GTP-binding protein OBGM, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=OBGM PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-07
Identity = 34/84 (40.48%), Postives = 42/84 (50.00%), Query Frame = 0


Query: 30  YYSDTP-SKKSKLAPLQERRMIDRFMMYAKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXX 89
           YY+  P  +K K APLQ R M+DRF + AKGG                        XX  
Sbjct: 26  YYATEPEGRKPKTAPLQSRGMVDRFRLRAKGGDGGNGCISLRRSRSDRQGKPDGGNXXRG 85

Query: 90  XXVILECSAALWDFSSLKHHIVCS 113
             VILECS ++WDFS L+HH+  S
Sbjct: 86  GDVILECSRSVWDFSGLQHHMKAS 109

[Close]

BLAST of Carg12369 vs. TrEMBL
Match: tr|A0A0A0KWW4|A0A0A0KWW4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623700 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.7e-29
Identity = 100/112 (89.29%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MRFLCVKQVLYLRGLRETSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDRFMMYAKGG 60
           MRFLCVK+VL+LRGLRE+SS PWLFSAISYYSDTP KKSKLAPLQERRMIDRF +YAKGG
Sbjct: 1   MRFLCVKRVLHLRGLRESSSCPWLFSAISYYSDTPKKKSKLAPLQERRMIDRFKVYAKGG 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHIVCS 113
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX VILECS ALWDFSSL HHI  S
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVILECSTALWDFSSLNHHINAS 112

[Close]

BLAST of Carg12369 vs. TrEMBL
Match: tr|A0A1S3BG88|A0A1S3BG88_CUCME (probable GTP-binding protein OBGM, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489498 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27
Identity = 98/112 (87.50%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MRFLCVKQVLYLRGLRETSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDRFMMYAKGG 60
           MRFLCVK+VL LRGLRE+SS PWLFSAISYYSD P KKSKLAPLQERRMIDRF +YAKGG
Sbjct: 1   MRFLCVKKVLRLRGLRESSSCPWLFSAISYYSDAPKKKSKLAPLQERRMIDRFKVYAKGG 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHIVCS 113
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX VILECS ALWDFS+L HHI  S
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVILECSTALWDFSTLNHHIKAS 112

[Close]

BLAST of Carg12369 vs. TrEMBL
Match: tr|E5GCK2|E5GCK2_CUCME (Mitochondrial GTPase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27
Identity = 98/112 (87.50%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MRFLCVKQVLYLRGLRETSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDRFMMYAKGG 60
           MRFLCVK+VL LRGLRE+SS PWLFSAISYYSD P KKSKLAPLQERRMIDRF +YAKGG
Sbjct: 1   MRFLCVKKVLRLRGLRESSSCPWLFSAISYYSDAPKKKSKLAPLQERRMIDRFKVYAKGG 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHIVCS 113
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX VILECS ALWDFS+L HHI  S
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVILECSTALWDFSTLNHHIKAS 112

[Close]

BLAST of Carg12369 vs. TrEMBL
Match: tr|A0A1S3BGW6|A0A1S3BGW6_CUCME (probable GTP-binding protein OBGM, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489498 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-27
Identity = 97/109 (88.99%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 1   MRFLCVKQVLYLRGLRETSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDRFMMYAKGG 60
           MRFLCVK+VL LRGLRE+SS PWLFSAISYYSD P KKSKLAPLQERRMIDRF +YAKGG
Sbjct: 1   MRFLCVKKVLRLRGLRESSSCPWLFSAISYYSDAPKKKSKLAPLQERRMIDRFKVYAKGG 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHI 110
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX VILECS ALWDFS+L HHI
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVILECSTALWDFSTLNHHI 109

[Close]

BLAST of Carg12369 vs. TrEMBL
Match: tr|A0A2P4HU61|A0A2P4HU61_QUESU (Putative gtp-binding protein obgm, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_38343 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.2e-19
Identity = 80/108 (74.07%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 5   CVKQVLYLRGLRETSSFPWLFSAISYYSDTPSKKSKLAPLQERRMIDRFMMYAKGGXXXX 64
           CVK +  L  LR++S  PWLFS  S YSDTP +KSKLAPLQER+MIDRF +YAKGGXXXX
Sbjct: 3   CVKPLWQLEALRQSSKSPWLFSLFSLYSDTPHRKSKLAPLQERKMIDRFRLYAKGGXXXX 62

Query: 65  XXXXXXXXXXXXXXXXXXXXXXXXXXVILECSAALWDFSSLKHHIVCS 113
           XXXXXXXXXXXXXXXXXXXXXXXXX VILECS  +WDFS L+HH+  +
Sbjct: 63  XXXXXXXXXXXXXXXXXXXXXXXXXDVILECSPTVWDFSGLQHHVAAN 110

The following BLAST results are available for this feature:

BLAST of Carg12369 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522978.1	2.9e-32	98.17	probable GTP-binding protein OBGM, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022997993.1	1.6e-30	96.33	probable GTP-binding protein OBGM, mitochondrial [Cucurbita maxima]	[more]
XP_022948603.1	4.7e-30	90.60	probable GTP-binding protein OBGM, mitochondrial [Cucurbita moschata]	[more]
XP_004142409.1	1.2e-28	89.29	PREDICTED: probable GTP-binding protein OBGM, mitochondrial [Cucumis sativus] >K...	[more]
ADN34199.1	2.2e-27	87.50	mitochondrial GTPase [Cucumis melo subsp. melo]	[more]

BLAST of Carg12369 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07615.1	3.7e-13	65.35	GTP-binding protein Obg/CgtA	[more]

BLAST of Carg12369 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4HSD4\|OBGM_ARATH	6.7e-12	65.35	Probable GTP-binding protein OBGM, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q2QZ37\|OBGM_ORYSJ	1.0e-07	40.48	Probable GTP-binding protein OBGM, mitochondrial OS=Oryza sativa subsp. japonica...	[more]

BLAST of Carg12369 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KWW4\|A0A0A0KWW4_CUCSA	7.7e-29	89.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623700 PE=4 SV=1	[more]
tr\|A0A1S3BG88\|A0A1S3BG88_CUCME	1.4e-27	87.50	probable GTP-binding protein OBGM, mitochondrial isoform X1 OS=Cucumis melo OX=3...	[more]
tr\|E5GCK2\|E5GCK2_CUCME	1.4e-27	87.50	Mitochondrial GTPase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3BGW6\|A0A1S3BGW6_CUCME	1.9e-27	88.99	probable GTP-binding protein OBGM, mitochondrial isoform X2 OS=Cucumis melo OX=3...	[more]
tr\|A0A2P4HU61\|A0A2P4HU61_QUESU	7.2e-19	74.07	Putative gtp-binding protein obgm, mitochondrial OS=Quercus suber OX=58331 GN=CF...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006169	GTP1_OBG_dom
IPR036726	GTP1_OBG_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12369-RA	Carg12369-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036726	GTP1/OBG domain superfamily	GENE3D	G3DSA:2.70.210.12		coord: 45..113 e-value: 1.6E-16 score: 62.1
IPR036726	GTP1/OBG domain superfamily	SUPERFAMILY	SSF82051	Obg GTP-binding protein N-terminal domain	coord: 49..110
IPR006169	GTP1/OBG domain	PFAM	PF01018	GTP1_OBG	coord: 50..108 e-value: 4.4E-16 score: 58.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..87
None	No IPR available	PANTHER	PTHR11702	DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED	coord: 36..109
None	No IPR available	PANTHER	PTHR11702:SF31	MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 2	coord: 36..109

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12369	CmaCh01G006010	Cucurbita maxima (Rimu)	carcmaB0613
Carg12369	Cp4.1LG02g13360	Cucurbita pepo (Zucchini)	carcpeB0622

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12369	Silver-seed gourd	carcarB192
Carg12369	Silver-seed gourd	carcarB332
Carg12369	Silver-seed gourd	carcarB353
Carg12369	Silver-seed gourd	carcarB408
Carg12369	Silver-seed gourd	carcarB449
Carg12369	Cucumber (Gy14) v2	carcgybB0453
Carg12369	Cucumber (Gy14) v2	carcgybB0452
Carg12369	Cucumber (Gy14) v2	carcgybB0448
Carg12369	Cucumber (Gy14) v2	carcgybB0450
Carg12369	Cucumber (Gy14) v1	carcgyB0510
Carg12369	Cucurbita maxima (Rimu)	carcmaB0610
Carg12369	Cucurbita maxima (Rimu)	carcmaB0612
Carg12369	Cucurbita maxima (Rimu)	carcmaB0615
Carg12369	Cucurbita maxima (Rimu)	carcmaB0618
Carg12369	Cucurbita moschata (Rifu)	carcmoB0594
Carg12369	Cucurbita moschata (Rifu)	carcmoB0595
Carg12369	Cucurbita moschata (Rifu)	carcmoB0596
Carg12369	Cucurbita moschata (Rifu)	carcmoB0598
Carg12369	Cucurbita moschata (Rifu)	carcmoB0601
Carg12369	Cucurbita pepo (Zucchini)	carcpeB0617
Carg12369	Cucurbita pepo (Zucchini)	carcpeB0619
Carg12369	Cucurbita pepo (Zucchini)	carcpeB0620
Carg12369	Cucurbita pepo (Zucchini)	carcpeB0624
Carg12369	Wild cucumber (PI 183967)	carcpiB0481
Carg12369	Wild cucumber (PI 183967)	carcpiB0476
Carg12369	Wild cucumber (PI 183967)	carcpiB0478
Carg12369	Cucumber (Chinese Long) v2	carcuB0471
Carg12369	Cucumber (Chinese Long) v2	carcuB0473
Carg12369	Cucumber (Chinese Long) v2	carcuB0475
Carg12369	Cucumber (Chinese Long) v3	carcucB0472
Carg12369	Cucumber (Chinese Long) v3	carcucB0475
Carg12369	Cucumber (Chinese Long) v3	carcucB0477
Carg12369	Melon (DHL92) v3.5.1	carmeB0446
Carg12369	Bottle gourd (USVL1VR-Ls)	carlsiB400
Carg12369	Bottle gourd (USVL1VR-Ls)	carlsiB403
Carg12369	Bottle gourd (USVL1VR-Ls)	carlsiB405
Carg12369	Melon (DHL92) v3.5.1	carmeB0449
Carg12369	Melon (DHL92) v3.5.1	carmeB0450
Carg12369	Melon (DHL92) v3.6.1	carmedB0448
Carg12369	Melon (DHL92) v3.6.1	carmedB0451
Carg12369	Melon (DHL92) v3.6.1	carmedB0453
Carg12369	Watermelon (Charleston Gray)	carwcgB0431
Carg12369	Watermelon (Charleston Gray)	carwcgB0435
Carg12369	Watermelon (Charleston Gray)	carwcgB0436
Carg12369	Watermelon (97103) v1	carwmB0438
Carg12369	Watermelon (97103) v1	carwmB0440
Carg12369	Watermelon (97103) v1	carwmB0441
Carg12369	Watermelon (97103) v1	carwmB0444
Carg12369	Watermelon (97103) v2	carwmbB0463
Carg12369	Watermelon (97103) v2	carwmbB0466
Carg12369	Watermelon (97103) v2	carwmbB0467
Carg12369	Wax gourd	carwgoB0529
Carg12369	Wax gourd	carwgoB0535