Carg12368 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12368
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Fasciclin-like arabinogalactan family protein
Location	Cucurbita_argyrosperma_scaffold_074 : 604989 .. 606705 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCACTCGCATTTCCCATTTTACCCCTATCCCTTCCCTCTTTTTCCTCCTCCTCCTCCTCTCCTCCTCCTCCCTTTCCCCTGTCCTTGCCCTAGACATCTCCTCCCTCCTCTCCTCCTTCCCCGACCTCTCCGATTTCGCCGCCCTTCTCTCCGCCTCCATCCTCTCAGATCTCAATCAACTCACCTCCCTCACTCTCCTCGCCGTCCCTAATTCCTACCTCGCCGCCTCCTCCGATCTCACTCACCGCATCCCTCAATCCTCCCTTGCCGATGTCCTCCGCTACCATGTCCTCCTCCAGTACCTCTCCCCTTCCGACCTCCGTCAGATCTCCCCTTCCGGCAAGCTCGTCACTACTCTCTTTCAAACTACTGGCCGTGCCACCAGCGATTTCGGCTCCGTCAACATCACTCGCGACCCACTCGACGGTCTTGTTTCTGTTCACTCCCCTGTTCCTTTCTCCTCTTCCAATGCTACTGTTTTGACGCTTCTTAAGAATCTTCCTTATAATGTCAGTATCTTTGCTGTTAATGCCCTTCTTGTCCCTTATGGATTTGATCTCATGGCGTCAGAAACTCGCCCGCCGTTGGGCTTGAATATCACTAGGGCTTTGATTGATGGCCATAATTTTAATGTTGCTGCCTCCATGCTTTTGGCTTCTGGTGTTGTTGATGAGTTTGAGGCCGATGAAGGCGGCGCTGGGATTACGCTTTTCGTTCCTACTGACTCCGCGTTTTCCGACCTTCCGCCCACAGTGAAGCTCCAGTCGCTGCCAGCGGATAAGAAGGCCGTTGTCTTGAAATTTCATGTGCTTCATTCTTATTACCCTCTCGGGTCTTTGGAATCGATTGTGAACCCTGTTCAGCCCACTTTAGCGACGGAGGATATGGGCGCCGGTAGCTTCACACTCAACATTTCGCGAGTTAACGGCTCAGTTGGGATCAATACCGGAATTGTTCAAGCATCGGTGACTCAGACGGTGTTCGATCAGAAGCCGGTCGCCATTTTTGGGGTTTCGGAAGTGCTATTGCCGAAGGAGATATTTGGGAACAATCCGATGATGACAATCAAGCCTGCAAATGAAACTATGGTCAGTGCTCAACCACCGGATGCAGTGGCAGCTATGTCGCCACAATCTAATGGACCGCCGTTACATCTTTCATCTCCACCAGGGTATCGTGAGGAAATCCGATCGGTTGCCGCCGGTAACGGCGTACTGAATTTCTTCCTGACTCTATGTTGTTGTATAGCATTGTATTTAATTCAGTAGTATAATATTCGATTGATTTTTCCCCGTGACAGTTGTTTTCATATTACGGGTTTCCTTTTTTTTTTTTTTCTTTTGGGTCTCTTTTTACACGATGATTCGAATGAATTGGGCTACAAAAAGTAGCAGCCAATTTTCCTTCCTGTAATTCGTTCCGTCGATTTCCATCTCTGTGTGGTGTAAATTAAAAGAAATCATACTGGTTTTGGAGATCTGCGGTGGTTTCAGTTTTGGATTTGCAGGTGTTTATGAGCAGCGAAAATGGTGGACGGACGGAAGGAAGGAAGGAAGGAAGGTAGGAAGGTAGGAAGGGGAAGCAATCTGTGGCTCAGAGATGTTGCCTCCTCATGTGTCATCTTCCCCAACAGATCAGGTTTCGTTTGTTTGGTTGCAGCCATTTCTCTGGGCTCTAGCTCTGCACAAGCCGAACTCCGAGGATCAGCTCTAA

mRNA sequence

ATGGGCACTCGCATTTCCCATTTTACCCCTATCCCTTCCCTCTTTTTCCTCCTCCTCCTCCTCTCCTCCTCCTCCCTTTCCCCTGTCCTTGCCCTAGACATCTCCTCCCTCCTCTCCTCCTTCCCCGACCTCTCCGATTTCGCCGCCCTTCTCTCCGCCTCCATCCTCTCAGATCTCAATCAACTCACCTCCCTCACTCTCCTCGCCGTCCCTAATTCCTACCTCGCCGCCTCCTCCGATCTCACTCACCGCATCCCTCAATCCTCCCTTGCCGATGTCCTCCGCTACCATGTCCTCCTCCAGTACCTCTCCCCTTCCGACCTCCGTCAGATCTCCCCTTCCGGCAAGCTCGTCACTACTCTCTTTCAAACTACTGGCCGTGCCACCAGCGATTTCGGCTCCGTCAACATCACTCGCGACCCACTCGACGGTCTTGTTTCTGTTCACTCCCCTGTTCCTTTCTCCTCTTCCAATGCTACTGTTTTGACGCTTCTTAAGAATCTTCCTTATAATGTCAGTATCTTTGCTGTTAATGCCCTTCTTGTCCCTTATGGATTTGATCTCATGGCGTCAGAAACTCGCCCGCCGTTGGGCTTGAATATCACTAGGGCTTTGATTGATGGCCATAATTTTAATGTTGCTGCCTCCATGCTTTTGGCTTCTGGTGTTGTTGATGAGTTTGAGGCCGATGAAGGCGGCGCTGGGATTACGCTTTTCGTTCCTACTGACTCCGCGTTTTCCGACCTTCCGCCCACAGTGAAGCTCCAGTCGCTGCCAGCGGATAAGAAGGCCGTTGTCTTGAAATTTCATGTGCTTCATTCTTATTACCCTCTCGGGTCTTTGGAATCGATTGTGAACCCTGTTCAGCCCACTTTAGCGACGGAGGATATGGGCGCCGGTAGCTTCACACTCAACATTTCGCGAGTTAACGGCTCAGTTGGGATCAATACCGGAATTGTTCAAGCATCGGTGACTCAGACGGTGTTCGATCAGAAGCCGGTCGCCATTTTTGGGGTTTCGGAAGTGCTATTGCCGAAGGAGATATTTGGGAACAATCCGATGATGACAATCAAGCCTGCAAATGAAACTATGGTCAGTGCTCAACCACCGGATGCAGTGGCAGCTATGTCGCCACAATCTAATGGACCGCCGTTACATCTTTCATCTCCACCAGGGTATCGTGAGGAAATCCGATCGGTTGCCGCCGGTGTTTATGAGCAGCGAAAATGGTGGACGGACGGAAGGAAGGAAGGAAGGAAGCCATTTCTCTGGGCTCTAGCTCTGCACAAGCCGAACTCCGAGGATCAGCTCTAA

Coding sequence (CDS)

ATGGGCACTCGCATTTCCCATTTTACCCCTATCCCTTCCCTCTTTTTCCTCCTCCTCCTCCTCTCCTCCTCCTCCCTTTCCCCTGTCCTTGCCCTAGACATCTCCTCCCTCCTCTCCTCCTTCCCCGACCTCTCCGATTTCGCCGCCCTTCTCTCCGCCTCCATCCTCTCAGATCTCAATCAACTCACCTCCCTCACTCTCCTCGCCGTCCCTAATTCCTACCTCGCCGCCTCCTCCGATCTCACTCACCGCATCCCTCAATCCTCCCTTGCCGATGTCCTCCGCTACCATGTCCTCCTCCAGTACCTCTCCCCTTCCGACCTCCGTCAGATCTCCCCTTCCGGCAAGCTCGTCACTACTCTCTTTCAAACTACTGGCCGTGCCACCAGCGATTTCGGCTCCGTCAACATCACTCGCGACCCACTCGACGGTCTTGTTTCTGTTCACTCCCCTGTTCCTTTCTCCTCTTCCAATGCTACTGTTTTGACGCTTCTTAAGAATCTTCCTTATAATGTCAGTATCTTTGCTGTTAATGCCCTTCTTGTCCCTTATGGATTTGATCTCATGGCGTCAGAAACTCGCCCGCCGTTGGGCTTGAATATCACTAGGGCTTTGATTGATGGCCATAATTTTAATGTTGCTGCCTCCATGCTTTTGGCTTCTGGTGTTGTTGATGAGTTTGAGGCCGATGAAGGCGGCGCTGGGATTACGCTTTTCGTTCCTACTGACTCCGCGTTTTCCGACCTTCCGCCCACAGTGAAGCTCCAGTCGCTGCCAGCGGATAAGAAGGCCGTTGTCTTGAAATTTCATGTGCTTCATTCTTATTACCCTCTCGGGTCTTTGGAATCGATTGTGAACCCTGTTCAGCCCACTTTAGCGACGGAGGATATGGGCGCCGGTAGCTTCACACTCAACATTTCGCGAGTTAACGGCTCAGTTGGGATCAATACCGGAATTGTTCAAGCATCGGTGACTCAGACGGTGTTCGATCAGAAGCCGGTCGCCATTTTTGGGGTTTCGGAAGTGCTATTGCCGAAGGAGATATTTGGGAACAATCCGATGATGACAATCAAGCCTGCAAATGAAACTATGGTCAGTGCTCAACCACCGGATGCAGTGGCAGCTATGTCGCCACAATCTAATGGACCGCCGTTACATCTTTCATCTCCACCAGGGTATCGTGAGGAAATCCGATCGGTTGCCGCCGGTGTTTATGAGCAGCGAAAATGGTGGACGGACGGAAGGAAGGAAGGAAGGAAGCCATTTCTCTGGGCTCTAGCTCTGCACAAGCCGAACTCCGAGGATCAGCTCTAA

Protein sequence

MGTRISHFTPIPSLFFLLLLLSSSSLSPVLALDISSLLSSFPDLSDFAALLSASILSDLNQLTSLTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTTLFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNALLVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFVPTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGSFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKPANETMVSAQPPDAVAAMSPQSNGPPLHLSSPPGYREEIRSVAAGVYEQRKWWTDGRKEGRKPFLWALALHKPNSEDQL

Homology

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BLAST of Carg12368 vs. NCBI nr
Match: XP_022997926.1 (fasciclin-like arabinogalactan protein 4 [Cucurbita maxima])

HSP 1 Score: 690.6 bits (1781), Expect = 3.3e-195
Identity = 366/403 (90.82%), Postives = 368/403 (91.32%), Query Frame = 0


Query: 1   MGTRISHFTPIPSLFFLLLLLSSXXLSPVLALDIXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MGTRISHFTPIPSL FLLLLLSS   SP+LALDI                          
Sbjct: 1   MGTRISHFTPIPSLVFLLLLLSSSSPSPILALDISSLLSSFPDLSDFAALLSASILSDLN 60

Query: 61  XXXXXTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTT 120
                TLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTT
Sbjct: 61  QLTSLTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTT 120

Query: 121 LFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNAL 180
           LFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVN+L
Sbjct: 121 LFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNSL 180

Query: 181 LVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFV 240
           LVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFV
Sbjct: 181 LVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFV 240

Query: 241 PTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG 300
           PTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG
Sbjct: 241 PTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG 300

Query: 301 SFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKPA 360
           SFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKPA
Sbjct: 301 SFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKPA 360

Query: 361 NETMVSAQPPDAVAAMSPQSNGPPLHLSSPPGYREEIRSVAAG 404
           NETMVSAQPPDAVAAMSPQSNGPPLHLSSPPGYREEIRSVAAG
Sbjct: 361 NETMVSAQPPDAVAAMSPQSNGPPLHLSSPPGYREEIRSVAAG 403

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BLAST of Carg12368 vs. NCBI nr
Match: XP_022949328.1 (fasciclin-like arabinogalactan protein 4 [Cucurbita moschata] >XP_022949329.1 fasciclin-like arabinogalactan protein 4 [Cucurbita moschata])

HSP 1 Score: 679.5 bits (1752), Expect = 7.7e-192
Identity = 362/403 (89.83%), Postives = 363/403 (90.07%), Query Frame = 0


Query: 1   MGTRISHFTPIPSLFFLLLLLSSXXLSPVLALDIXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MGTRISHFTPIPSLFF       XX SP+LALDI                          
Sbjct: 1   MGTRISHFTPIPSLFFXXXXXXXXXXSPLLALDISSLLSSFPDLSDFAALLSASILSDLN 60

Query: 61  XXXXXTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTT 120
                TLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTT
Sbjct: 61  QLTSLTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTT 120

Query: 121 LFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNAL 180
           LFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNAL
Sbjct: 121 LFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNAL 180

Query: 181 LVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFV 240
           LVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFV
Sbjct: 181 LVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFV 240

Query: 241 PTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG 300
           PTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG
Sbjct: 241 PTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG 300

Query: 301 SFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKPA 360
           SFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKPA
Sbjct: 301 SFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKPA 360

Query: 361 NETMVSAQPPDAVAAMSPQSNGPPLHLSSPPGYREEIRSVAAG 404
           NETMVSAQPPDAV AMSPQSNGPPLHLSSPPGYREEIRSVAAG
Sbjct: 361 NETMVSAQPPDAVGAMSPQSNGPPLHLSSPPGYREEIRSVAAG 403

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BLAST of Carg12368 vs. NCBI nr
Match: XP_023523051.1 (fasciclin-like arabinogalactan protein 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 678.7 bits (1750), Expect = 1.3e-191
Identity = 362/403 (89.83%), Postives = 364/403 (90.32%), Query Frame = 0


Query: 1   MGTRISHFTPIPSLFFLLLLLSSXXLSPVLALDIXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MGTRISHFTPIPSLFF       XX SPVLALDI                          
Sbjct: 1   MGTRISHFTPIPSLFFXXXXXXXXXPSPVLALDISSLLSSFPDLSDFAALLSTSILSDLN 60

Query: 61  XXXXXTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTT 120
                TLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTT
Sbjct: 61  QLTSLTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTT 120

Query: 121 LFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNAL 180
           LFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNAL
Sbjct: 121 LFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNAL 180

Query: 181 LVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFV 240
           LVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFV
Sbjct: 181 LVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFV 240

Query: 241 PTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG 300
           PTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG
Sbjct: 241 PTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG 300

Query: 301 SFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKPA 360
           SFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNP+MTIKPA
Sbjct: 301 SFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPIMTIKPA 360

Query: 361 NETMVSAQPPDAVAAMSPQSNGPPLHLSSPPGYREEIRSVAAG 404
           NETMVSAQPPDA+AAMSPQSNGPPLHLSSPPGYREEIRSVAAG
Sbjct: 361 NETMVSAQPPDAMAAMSPQSNGPPLHLSSPPGYREEIRSVAAG 403

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BLAST of Carg12368 vs. NCBI nr
Match: XP_004150187.1 (PREDICTED: fasciclin-like arabinogalactan protein 4 [Cucumis sativus] >KGN65714.1 hypothetical protein Csa_1G507470 [Cucumis sativus])

HSP 1 Score: 609.0 bits (1569), Expect = 1.3e-170
Identity = 346/403 (85.86%), Postives = 361/403 (89.58%), Query Frame = 0


Query: 1   MGTRISHFTPIPSLFFLLLLLSSXXLSPVLALDI-XXXXXXXXXXXXXXXXXXXXXXXXX 60
           MGT ISHFTP+  L+FLLL       SP+LAL+          XXXXXXXXXXXXXXXX 
Sbjct: 4   MGTPISHFTPLHLLYFLLL-----SSSPILALNFSSLLSSFPDXXXXXXXXXXXXXXXXL 63

Query: 61  XXXXXXTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVT 120
                 TLLAVPNSYLAASSDLTHRIP SSLAD+LRYHVLLQYLSPSDLR ISPSGKLVT
Sbjct: 64  NHRTSLTLLAVPNSYLAASSDLTHRIPPSSLADLLRYHVLLQYLSPSDLRHISPSGKLVT 123

Query: 121 TLFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNA 180
           TLFQTTGRATSDFGSVNITR+PLDG+VSVHSPVPFSSSNATVLTLL+NLPYNVSIFAVNA
Sbjct: 124 TLFQTTGRATSDFGSVNITRNPLDGVVSVHSPVPFSSSNATVLTLLQNLPYNVSIFAVNA 183

Query: 181 LLVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLF 240
           LLVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASML ASGVV+EFEADEGGAGITLF
Sbjct: 184 LLVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLSASGVVEEFEADEGGAGITLF 243

Query: 241 VPTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGA 300
           VPTD AFSDLP TVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGA
Sbjct: 244 VPTDVAFSDLPGTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGA 303

Query: 301 GSFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKP 360
           G FTLNISRVNGSVGINTGIVQASVTQTVFDQ PVAIFGVSEVLLP+EIFGNNPMMT KP
Sbjct: 304 GRFTLNISRVNGSVGINTGIVQASVTQTVFDQNPVAIFGVSEVLLPREIFGNNPMMTAKP 363

Query: 361 ANETMVSAQPPDAVAAMSPQSNGPPLHLSSPPGYREEIRSVAA 403
            NE + +AQPP+ + AMSP+SNGP LHLSSPPGY EEIRSVAA
Sbjct: 364 RNEIVGNAQPPEGM-AMSPESNGPQLHLSSPPGYGEEIRSVAA 400

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BLAST of Carg12368 vs. NCBI nr
Match: XP_022965003.1 (fasciclin-like arabinogalactan protein 4 [Cucurbita moschata])

HSP 1 Score: 602.8 bits (1553), Expect = 9.1e-169
Identity = 327/402 (81.34%), Postives = 345/402 (85.82%), Query Frame = 0


Query: 1   MGTRISHFTPIPSLFFLLLLLSSXXLSPVLALDI-XXXXXXXXXXXXXXXXXXXXXXXXX 60
           MGTRISHFTPI  L+FLLL   S   SP+LAL+I                          
Sbjct: 1   MGTRISHFTPILFLYFLLL---SSPPSPILALNISSLLSSFPDLSHFAALLSASSILSDL 60

Query: 61  XXXXXXTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVT 120
                 TLLAVPNSYL ASSDLT RIP SSLAD+LRYHVLLQYLSP DLR ISPSGKLVT
Sbjct: 61  NHRTSLTLLAVPNSYLDASSDLTRRIPPSSLADLLRYHVLLQYLSPYDLRHISPSGKLVT 120

Query: 121 TLFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNA 180
           TLFQTTGRATSDFGS+NITR+PLDG+VS+HSPVPFSSSNATVLTLLKNLPYNVSIFAVNA
Sbjct: 121 TLFQTTGRATSDFGSLNITRNPLDGIVSLHSPVPFSSSNATVLTLLKNLPYNVSIFAVNA 180

Query: 181 LLVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLF 240
           LLVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASML ASGVV+EFEADEGGAGITLF
Sbjct: 181 LLVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLSASGVVEEFEADEGGAGITLF 240

Query: 241 VPTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGA 300
           VPTD+AFSDLP TV LQSL ADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGA
Sbjct: 241 VPTDTAFSDLPGTVSLQSLSADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGA 300

Query: 301 GSFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKP 360
           GSFTLNISRVNGSVGINTGIVQASVTQTV DQ PVAIFGVSEVLLP+EIFGN+PMMT +P
Sbjct: 301 GSFTLNISRVNGSVGINTGIVQASVTQTVIDQNPVAIFGVSEVLLPREIFGNSPMMTTQP 360

Query: 361 ANETMVSAQPPDAVAAMSPQSNGPPLHLSSPPGYREEIRSVA 402
            NE + SAQPPD++ AMSP+S+GPPLHLSSPPGY EEIRSVA
Sbjct: 361 GNEIVSSAQPPDSM-AMSPESSGPPLHLSSPPGYGEEIRSVA 398

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BLAST of Carg12368 vs. TAIR10
Match: AT3G46550.1 (Fasciclin-like arabinogalactan family protein)

HSP 1 Score: 360.9 bits (925), Expect = 1.1e-99
Identity = 204/349 (58.45%), Postives = 251/349 (71.92%), Query Frame = 0


Query: 66  TLLAVPNS-YLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTTLFQT 125
           TLLAVPNS + +AS DLT R+P S+LAD+LR+HVLLQ+LS SDLR+I PSG  VTTL++ 
Sbjct: 64  TLLAVPNSQFSSASLDLTRRLPPSALADLLRFHVLLQFLSDSDLRRIPPSGSAVTTLYEA 123

Query: 126 TGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNALLVPY 185
           +GR     GSVN+TRDP  G V++ SP   ++ N TVL LL+  P N+++  V++L+VP 
Sbjct: 124 SGRTFFGSGSVNVTRDPASGSVTIGSP---ATKNVTVLKLLETKPPNITVLTVDSLIVPT 183

Query: 186 GFDLMASETRPP-----------LGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGG 245
           G D+ ASET  P              N+T+ LI+GHNFNVA S+L+ASGV+ EFE DE G
Sbjct: 184 GIDITASETLTPPPTXXXXXXXXXXXNLTQILINGHNFNVALSLLVASGVITEFENDERG 243

Query: 246 AGITLFVPTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLA 305
           AGIT+FVPTDSAFSDLP  V LQSLPA++KA VLKFHVLHSYY LGSLESI NPVQPTLA
Sbjct: 244 AGITVFVPTDSAFSDLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLA 303

Query: 306 TEDMGAGSFTLNISRVNGS-VGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNN 365
           TE+MGAGS+TLNISRVNGS V IN+G+V A VTQT FDQ PV++FGVS+VLLPKE+F   
Sbjct: 304 TEEMGAGSYTLNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELF--- 363

Query: 366 PMMTIKPANETMVSAQPPDAVAAMSPQSNGPPLHLSSPPGYREEIRSVA 402
                 P +   V+  PP  ++     S+  P  L SPP  RE + S A
Sbjct: 364 ------PKSGQPVATAPPQEISLSPESSSEQPSRLVSPP--REIVSSGA 398

[Close]

BLAST of Carg12368 vs. TAIR10
Match: AT3G60900.1 (FASCICLIN-like arabinogalactan-protein 10)

HSP 1 Score: 137.5 bits (345), Expect = 2.0e-32
Identity = 97/287 (33.80%), Postives = 150/287 (52.26%), Query Frame = 0


Query: 66  TLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTTLFQTT 125
           T+L + N    A S L  + P S + + L   VLL Y  P  L Q+S    L TTL+QTT
Sbjct: 61  TVLVLNN---GAMSSLAGKHPLSVVKNALSLLVLLDYYDPLKLHQLSKGTTLTTTLYQTT 120

Query: 126 GRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNALLVPYG 185
           G A  + G VN+T D   G V   S  P S  +++    +K +PYN+S+  +NA ++  G
Sbjct: 121 GHALGNLGFVNVT-DLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEINAPIIAPG 180

Query: 186 FDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFVPTDSA 245
             ++ +      G++    L++       A++L++SGV+  FE+     G+T+F P+D A
Sbjct: 181 --ILTAPAPSSAGVSNITGLLEKAGCKTFANLLVSSGVIKTFESTV-EKGLTVFAPSDEA 240

Query: 246 FSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGSFTLN 305
           F        L +L   +   +L++H L  Y P GSL++  + +  TLAT   GAG + L 
Sbjct: 241 FK-ARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAIS-TLATN--GAGKYDLT 300

Query: 306 ISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNN 353
            S     V ++TG+  + +  TV D+ PV IF V  VLLP E+FG +
Sbjct: 301 TSTSGDEVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELFGKS 336

[Close]

BLAST of Carg12368 vs. TAIR10
Match: AT2G45470.1 (FASCICLIN-like arabinogalactan protein 8)

HSP 1 Score: 132.9 bits (333), Expect = 4.8e-31
Identity = 100/289 (34.60%), Postives = 147/289 (50.87%), Query Frame = 0


Query: 66  TLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTTLFQTT 125
           T+L + N    A S L  + P S +   L   VLL Y  P  L +IS    L TTL+QTT
Sbjct: 61  TVLVLNN---GAMSALAGKHPLSVIKSALSLLVLLDYYDPQKLHKISKGTTLSTTLYQTT 120

Query: 126 GRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNALLVPYG 185
           G A  + G VNIT D   G V   S    S  +++    +K +PYN+SI  ++A ++  G
Sbjct: 121 GNAPGNLGFVNIT-DLKGGKVGFGSAASGSKLDSSYTKSVKQIPYNISILEIDAPIIAPG 180

Query: 186 FDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFVPTDSA 245
              + +   P   L+    L++       A++L++SGV+  +E+     G+T+F P+D A
Sbjct: 181 ---VLTAPAPSASLSNITGLLEKAGCKTFANLLVSSGVLKTYES-AVEKGLTVFAPSDEA 240

Query: 246 F--SDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGSFT 305
           F    +P   KL      +   +L++H L  Y P GSL++  N +  TLAT   GAG F 
Sbjct: 241 FKAEGVPDLTKLTQA---EVVSLLEYHALAEYKPKGSLKTNKNNIS-TLATN--GAGKFD 300

Query: 306 LNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNN 353
           L  S     V ++TG+  + +  TV D  PV IF V  VLLP E+FG +
Sbjct: 301 LTTSTSGDEVILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELFGKS 335

[Close]

BLAST of Carg12368 vs. TAIR10
Match: AT5G55730.1 (FASCICLIN-like arabinogalactan 1)

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-26
Identity = 93/284 (32.75%), Postives = 141/284 (49.65%), Query Frame = 0


Query: 66  TLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTTLFQTT 125
           T+ AV N+ ++A +   + +  S+L ++L  HVLL Y     L QI     L  TLFQ T
Sbjct: 60  TVCAVDNAAMSALTSKGYTL--STLKNILSLHVLLDYFGTKKLHQIRDGSALAATLFQAT 119

Query: 126 GRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNALLVPYG 185
           G A    G VNIT D   G V    P     S+  V + ++ +PYN+SI  ++ +L    
Sbjct: 120 GAAPGTSGFVNIT-DLRGGKVG-FGPDGGDLSSFFVKS-IEEVPYNISIIQISRVLPS-- 179

Query: 186 FDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFVPTDSA 245
            +  A+ T  P  +N+T  ++  H   V A  LL +    +   +    G+T+F P D A
Sbjct: 180 -ETAAAPTPAPAEMNLT-GIMSAHGCKVFAETLLTNPGASKTYQESLEGGMTVFCPGDDA 239

Query: 246 FSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGSFTLN 305
                P  K ++L A KK   L F  + +YY +  L+S   P+  TLAT+  GA  F L 
Sbjct: 240 MKGFLP--KYKNLTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMN-TLATD--GANKFELT 299

Query: 306 ISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIF 350
           +      V + T I    +  T+ D++P+AI+   +VLLPKE+F
Sbjct: 300 VQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATDKVLLPKELF 329

[Close]

BLAST of Carg12368 vs. TAIR10
Match: AT4G12730.1 (FASCICLIN-like arabinogalactan 2)

HSP 1 Score: 105.5 bits (262), Expect = 8.3e-23
Identity = 90/284 (31.69%), Postives = 140/284 (49.30%), Query Frame = 0


Query: 66  TLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTTLFQTT 125
           T+LAV NS  A SS L++      + ++L  HVL+ Y     L QI+       ++FQ+T
Sbjct: 62  TVLAVDNS--AMSSILSNGYSLYQIRNILSLHVLVDYFGTKKLHQITDGSTSTASMFQST 121

Query: 126 GRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNALLVPYG 185
           G AT   G +NIT D   G V+       S   A  +  +   PYN+S+  ++ +L    
Sbjct: 122 GSATGTSGYINIT-DIKGGKVAFGVQDDDSKLTAHYVKSVFEKPYNISVLHISQVLTSPE 181

Query: 186 FDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFVPTDSA 245
            +   + T  P  L +T  +++       + +L ++G    F+ D    G+T+F P+DSA
Sbjct: 182 AE---APTASPSDLILT-TILEKQGCKAFSDILKSTGADKTFQ-DTVDGGLTVFCPSDSA 241

Query: 246 FSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGSFTLN 305
                P  K  S PA+K A+VL +H +  Y  L  L S  N    TLATE  G   F   
Sbjct: 242 VGKFMPKFKSLS-PANKTALVL-YHGMPVYQSLQMLRS-GNGAVNTLATE--GNNKFDFT 301

Query: 306 ISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIF 350
           +      V + T +V A V  T+ DQ+P+ ++ + +VLLP+EI+
Sbjct: 302 VQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREIY 332

[Close]

BLAST of Carg12368 vs. Swiss-Prot
Match: sp|Q9SNC3|FLA4_ARATH (Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana OX=3702 GN=FLA4 PE=1 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 2.0e-98
Identity = 204/349 (58.45%), Postives = 251/349 (71.92%), Query Frame = 0


Query: 66  TLLAVPNS-YLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTTLFQT 125
           TLLAVPNS + +AS DLT R+P S+LAD+LR+HVLLQ+LS SDLR+I PSG  VTTL++ 
Sbjct: 64  TLLAVPNSQFSSASLDLTRRLPPSALADLLRFHVLLQFLSDSDLRRIPPSGSAVTTLYEA 123

Query: 126 TGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNALLVPY 185
           +GR     GSVN+TRDP  G V++ SP   ++ N TVL LL+  P N+++  V++L+VP 
Sbjct: 124 SGRTFFGSGSVNVTRDPASGSVTIGSP---ATKNVTVLKLLETKPPNITVLTVDSLIVPT 183

Query: 186 GFDLMASETRPP-----------LGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGG 245
           G D+ ASET  P              N+T+ LI+GHNFNVA S+L+ASGV+ EFE DE G
Sbjct: 184 GIDITASETLTPPPTXXXXXXXXXXXNLTQILINGHNFNVALSLLVASGVITEFENDERG 243

Query: 246 AGITLFVPTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLA 305
           AGIT+FVPTDSAFSDLP  V LQSLPA++KA VLKFHVLHSYY LGSLESI NPVQPTLA
Sbjct: 244 AGITVFVPTDSAFSDLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLA 303

Query: 306 TEDMGAGSFTLNISRVNGS-VGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNN 365
           TE+MGAGS+TLNISRVNGS V IN+G+V A VTQT FDQ PV++FGVS+VLLPKE+F   
Sbjct: 304 TEEMGAGSYTLNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELF--- 363

Query: 366 PMMTIKPANETMVSAQPPDAVAAMSPQSNGPPLHLSSPPGYREEIRSVA 402
                 P +   V+  PP  ++     S+  P  L SPP  RE + S A
Sbjct: 364 ------PKSGQPVATAPPQEISLSPESSSEQPSRLVSPP--REIVSSGA 398

[Close]

BLAST of Carg12368 vs. Swiss-Prot
Match: sp|Q9LZX4|FLA10_ARATH (Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana OX=3702 GN=FLA10 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.5e-31
Identity = 97/287 (33.80%), Postives = 150/287 (52.26%), Query Frame = 0


Query: 66  TLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTTLFQTT 125
           T+L + N    A S L  + P S + + L   VLL Y  P  L Q+S    L TTL+QTT
Sbjct: 61  TVLVLNN---GAMSSLAGKHPLSVVKNALSLLVLLDYYDPLKLHQLSKGTTLTTTLYQTT 120

Query: 126 GRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNALLVPYG 185
           G A  + G VN+T D   G V   S  P S  +++    +K +PYN+S+  +NA ++  G
Sbjct: 121 GHALGNLGFVNVT-DLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEINAPIIAPG 180

Query: 186 FDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFVPTDSA 245
             ++ +      G++    L++       A++L++SGV+  FE+     G+T+F P+D A
Sbjct: 181 --ILTAPAPSSAGVSNITGLLEKAGCKTFANLLVSSGVIKTFESTV-EKGLTVFAPSDEA 240

Query: 246 FSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGSFTLN 305
           F        L +L   +   +L++H L  Y P GSL++  + +  TLAT   GAG + L 
Sbjct: 241 FK-ARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAIS-TLATN--GAGKYDLT 300

Query: 306 ISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNN 353
            S     V ++TG+  + +  TV D+ PV IF V  VLLP E+FG +
Sbjct: 301 TSTSGDEVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELFGKS 336

[Close]

BLAST of Carg12368 vs. Swiss-Prot
Match: sp|O22126|FLA8_ARATH (Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana OX=3702 GN=FLA8 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 8.7e-30
Identity = 100/289 (34.60%), Postives = 147/289 (50.87%), Query Frame = 0


Query: 66  TLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTTLFQTT 125
           T+L + N    A S L  + P S +   L   VLL Y  P  L +IS    L TTL+QTT
Sbjct: 61  TVLVLNN---GAMSALAGKHPLSVIKSALSLLVLLDYYDPQKLHKISKGTTLSTTLYQTT 120

Query: 126 GRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNALLVPYG 185
           G A  + G VNIT D   G V   S    S  +++    +K +PYN+SI  ++A ++  G
Sbjct: 121 GNAPGNLGFVNIT-DLKGGKVGFGSAASGSKLDSSYTKSVKQIPYNISILEIDAPIIAPG 180

Query: 186 FDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFVPTDSA 245
              + +   P   L+    L++       A++L++SGV+  +E+     G+T+F P+D A
Sbjct: 181 ---VLTAPAPSASLSNITGLLEKAGCKTFANLLVSSGVLKTYES-AVEKGLTVFAPSDEA 240

Query: 246 F--SDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGSFT 305
           F    +P   KL      +   +L++H L  Y P GSL++  N +  TLAT   GAG F 
Sbjct: 241 FKAEGVPDLTKLTQA---EVVSLLEYHALAEYKPKGSLKTNKNNIS-TLATN--GAGKFD 300

Query: 306 LNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNN 353
           L  S     V ++TG+  + +  TV D  PV IF V  VLLP E+FG +
Sbjct: 301 LTTSTSGDEVILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELFGKS 335

[Close]

BLAST of Carg12368 vs. Swiss-Prot
Match: sp|Q9FM65|FLA1_ARATH (Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLA1 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.8e-25
Identity = 93/284 (32.75%), Postives = 141/284 (49.65%), Query Frame = 0


Query: 66  TLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTTLFQTT 125
           T+ AV N+ ++A +   + +  S+L ++L  HVLL Y     L QI     L  TLFQ T
Sbjct: 60  TVCAVDNAAMSALTSKGYTL--STLKNILSLHVLLDYFGTKKLHQIRDGSALAATLFQAT 119

Query: 126 GRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNALLVPYG 185
           G A    G VNIT D   G V    P     S+  V + ++ +PYN+SI  ++ +L    
Sbjct: 120 GAAPGTSGFVNIT-DLRGGKVG-FGPDGGDLSSFFVKS-IEEVPYNISIIQISRVLPS-- 179

Query: 186 FDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFVPTDSA 245
            +  A+ T  P  +N+T  ++  H   V A  LL +    +   +    G+T+F P D A
Sbjct: 180 -ETAAAPTPAPAEMNLT-GIMSAHGCKVFAETLLTNPGASKTYQESLEGGMTVFCPGDDA 239

Query: 246 FSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGSFTLN 305
                P  K ++L A KK   L F  + +YY +  L+S   P+  TLAT+  GA  F L 
Sbjct: 240 MKGFLP--KYKNLTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMN-TLATD--GANKFELT 299

Query: 306 ISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIF 350
           +      V + T I    +  T+ D++P+AI+   +VLLPKE+F
Sbjct: 300 VQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATDKVLLPKELF 329

[Close]

BLAST of Carg12368 vs. Swiss-Prot
Match: sp|Q9SU13|FLA2_ARATH (Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.5e-21
Identity = 90/284 (31.69%), Postives = 140/284 (49.30%), Query Frame = 0


Query: 66  TLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTTLFQTT 125
           T+LAV NS  A SS L++      + ++L  HVL+ Y     L QI+       ++FQ+T
Sbjct: 62  TVLAVDNS--AMSSILSNGYSLYQIRNILSLHVLVDYFGTKKLHQITDGSTSTASMFQST 121

Query: 126 GRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNALLVPYG 185
           G AT   G +NIT D   G V+       S   A  +  +   PYN+S+  ++ +L    
Sbjct: 122 GSATGTSGYINIT-DIKGGKVAFGVQDDDSKLTAHYVKSVFEKPYNISVLHISQVLTSPE 181

Query: 186 FDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFVPTDSA 245
            +   + T  P  L +T  +++       + +L ++G    F+ D    G+T+F P+DSA
Sbjct: 182 AE---APTASPSDLILT-TILEKQGCKAFSDILKSTGADKTFQ-DTVDGGLTVFCPSDSA 241

Query: 246 FSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGSFTLN 305
                P  K  S PA+K A+VL +H +  Y  L  L S  N    TLATE  G   F   
Sbjct: 242 VGKFMPKFKSLS-PANKTALVL-YHGMPVYQSLQMLRS-GNGAVNTLATE--GNNKFDFT 301

Query: 306 ISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIF 350
           +      V + T +V A V  T+ DQ+P+ ++ + +VLLP+EI+
Sbjct: 302 VQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREIY 332

[Close]

BLAST of Carg12368 vs. TrEMBL
Match: tr|A0A0A0LXD7|A0A0A0LXD7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G507470 PE=4 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 8.4e-171
Identity = 346/403 (85.86%), Postives = 361/403 (89.58%), Query Frame = 0


Query: 1   MGTRISHFTPIPSLFFLLLLLSSXXLSPVLALDI-XXXXXXXXXXXXXXXXXXXXXXXXX 60
           MGT ISHFTP+  L+FLLL       SP+LAL+          XXXXXXXXXXXXXXXX 
Sbjct: 4   MGTPISHFTPLHLLYFLLL-----SSSPILALNFSSLLSSFPDXXXXXXXXXXXXXXXXL 63

Query: 61  XXXXXXTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVT 120
                 TLLAVPNSYLAASSDLTHRIP SSLAD+LRYHVLLQYLSPSDLR ISPSGKLVT
Sbjct: 64  NHRTSLTLLAVPNSYLAASSDLTHRIPPSSLADLLRYHVLLQYLSPSDLRHISPSGKLVT 123

Query: 121 TLFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNA 180
           TLFQTTGRATSDFGSVNITR+PLDG+VSVHSPVPFSSSNATVLTLL+NLPYNVSIFAVNA
Sbjct: 124 TLFQTTGRATSDFGSVNITRNPLDGVVSVHSPVPFSSSNATVLTLLQNLPYNVSIFAVNA 183

Query: 181 LLVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLF 240
           LLVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASML ASGVV+EFEADEGGAGITLF
Sbjct: 184 LLVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLSASGVVEEFEADEGGAGITLF 243

Query: 241 VPTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGA 300
           VPTD AFSDLP TVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGA
Sbjct: 244 VPTDVAFSDLPGTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGA 303

Query: 301 GSFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKP 360
           G FTLNISRVNGSVGINTGIVQASVTQTVFDQ PVAIFGVSEVLLP+EIFGNNPMMT KP
Sbjct: 304 GRFTLNISRVNGSVGINTGIVQASVTQTVFDQNPVAIFGVSEVLLPREIFGNNPMMTAKP 363

Query: 361 ANETMVSAQPPDAVAAMSPQSNGPPLHLSSPPGYREEIRSVAA 403
            NE + +AQPP+ + AMSP+SNGP LHLSSPPGY EEIRSVAA
Sbjct: 364 RNEIVGNAQPPEGM-AMSPESNGPQLHLSSPPGYGEEIRSVAA 400

[Close]

BLAST of Carg12368 vs. TrEMBL
Match: tr|A0A1S4E1I9|A0A1S4E1I9_CUCME (LOW QUALITY PROTEIN: fasciclin-like arabinogalactan protein 4 OS=Cucumis melo OX=3656 GN=LOC103497237 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 6.1e-153
Identity = 321/403 (79.65%), Postives = 335/403 (83.13%), Query Frame = 0


Query: 1   MGTRISHFTPIPSLFFLLLLLSSXXLSPVLALDI-XXXXXXXXXXXXXXXXXXXXXXXXX 60
           MGT ISHFTP+  L+FLLL       SP+LAL+            XXXXXXXXXXXXXX 
Sbjct: 1   MGTPISHFTPLHFLYFLLL-----SSSPILALNFSSLLSSFPDLSXXXXXXXXXXXXXXL 60

Query: 61  XXXXXXTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVT 120
                 TLLAVPNSYLAASSDLTHRIP SSLAD+LRYHVLLQYLSPSDLR ISPSGKLVT
Sbjct: 61  NHRTSLTLLAVPNSYLAASSDLTHRIPPSSLADLLRYHVLLQYLSPSDLRHISPSGKLVT 120

Query: 121 TLFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNA 180
           TLFQTTGR         +   P            FSSSNATVLTLL+NLPYNVSIFAVNA
Sbjct: 121 TLFQTTGRXXXXXXXRRLRSLPCS---------XFSSSNATVLTLLQNLPYNVSIFAVNA 180

Query: 181 LLVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLF 240
           LLVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASML ASGVV+EFEADEGGAGITLF
Sbjct: 181 LLVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLSASGVVEEFEADEGGAGITLF 240

Query: 241 VPTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGA 300
           VPTD AFSDLP TVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGA
Sbjct: 241 VPTDIAFSDLPGTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGA 300

Query: 301 GSFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKP 360
           G FTLNISRVNGSVGINTGIVQASVTQTVFDQ PVAIFGVSEVLLP+EIFGNNPMMT KP
Sbjct: 301 GRFTLNISRVNGSVGINTGIVQASVTQTVFDQNPVAIFGVSEVLLPREIFGNNPMMTAKP 360

Query: 361 ANETMVSAQPPDAVAAMSPQSNGPPLHLSSPPGYREEIRSVAA 403
            NE + +AQPP+ + AMSP+SNGP LHLSSPPGY EEIRSVAA
Sbjct: 361 RNEIVGNAQPPEGM-AMSPESNGPQLHLSSPPGYGEEIRSVAA 388

[Close]

BLAST of Carg12368 vs. TrEMBL
Match: tr|A0A2P5EJA5|A0A2P5EJA5_9ROSA (FAS1 domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_186260 PE=4 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.3e-147
Identity = 294/404 (72.77%), Postives = 320/404 (79.21%), Query Frame = 0


Query: 5   ISHFTPIPS-LFFLLLLLSSXXLSP-VLALDI--XXXXXXXXXXXXXXXXXXXXXXXXXX 64
           +SHF P  S L FLLLL SS   +P  LAL+I                            
Sbjct: 8   VSHFAPTMSILVFLLLLSSSITTTPTALALNITDLVSSFPDLSDFTSLLSSSASLAVDLS 67

Query: 65  XXXXXTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTT 124
                TLLAVPN+YL+ASSDLT R+  SS ADVLRYHVLL+YLS SDLR+I PSGKLVTT
Sbjct: 68  RRSSLTLLAVPNTYLSASSDLTRRLSSSSRADVLRYHVLLEYLSVSDLRRIPPSGKLVTT 127

Query: 125 LFQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNAL 184
           L QTTGRAT++FGSVNITRDP  G VSV SP P+S SNATVL L+K LPYNVS+F VN+L
Sbjct: 128 LLQTTGRATNNFGSVNITRDPSTGAVSVRSPAPYSPSNATVLNLIKTLPYNVSVFTVNSL 187

Query: 185 LVPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFV 244
           LVPYGFDLMASETRPPLGLNIT+ALIDGHNFNVAASML ASGVV+EFEADEGGAGITLFV
Sbjct: 188 LVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLSASGVVEEFEADEGGAGITLFV 247

Query: 245 PTDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG 304
           P D+AF+DLP  V+LQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG
Sbjct: 248 PVDTAFADLPANVRLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG 307

Query: 305 SFTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKPA 364
           SFTLNISRV GSV I+TGIVQASVTQTVFDQ PVAIFGVSEVLLP+EIFG NP+MT KP 
Sbjct: 308 SFTLNISRVKGSVAIDTGIVQASVTQTVFDQNPVAIFGVSEVLLPREIFGKNPIMTAKPG 367

Query: 365 NETMVSAQPPDAVAA--MSPQSNGPPLHLSSPPGYREEIRSVAA 403
              + SAQPPD   +   SP  +GPP HLSSPPG+REEIRS AA
Sbjct: 368 APFVDSAQPPDIALSPEFSPGFDGPPSHLSSPPGFREEIRSEAA 411

[Close]

BLAST of Carg12368 vs. TrEMBL
Match: tr|A0A2P5AJJ1|A0A2P5AJJ1_PARAD (FAS1 domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_326160 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 9.7e-143
Identity = 285/403 (70.72%), Postives = 312/403 (77.42%), Query Frame = 0


Query: 5   ISHFTPIPSLFFLLLLLSSXXLSP-VLALDI--XXXXXXXXXXXXXXXXXXXXXXXXXXX 64
           ISHF P  S+   LLL SS   +P  LAL+I                             
Sbjct: 8   ISHFAPTMSILVFLLLSSSITTTPTALALNITDLLSSFPDLSDFTSLLSSSASLPADLSR 67

Query: 65  XXXXTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTTL 124
               TLLAVPN+YL+ASSDLT R+  S  ADVLRYHVLL+YLS SDLR+I  SGKLVTTL
Sbjct: 68  RSSLTLLAVPNTYLSASSDLTRRLSSSRRADVLRYHVLLEYLSVSDLRRIPSSGKLVTTL 127

Query: 125 FQTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNALL 184
            QTTGRAT++FGSVNITRDP  G VSV SP P+S SNATVL L+K LPYNVS+F VN+LL
Sbjct: 128 LQTTGRATNNFGSVNITRDPSTGAVSVRSPAPYSPSNATVLNLIKTLPYNVSVFTVNSLL 187

Query: 185 VPYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFVP 244
           VPYGFDLMASETRP L LNIT+ LIDGHNFNVAASML ASGVV+EFEADEGGAGITLFVP
Sbjct: 188 VPYGFDLMASETRPLLRLNITKTLIDGHNFNVAASMLSASGVVEEFEADEGGAGITLFVP 247

Query: 245 TDSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGS 304
            D+AF+DLP  V+LQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG 
Sbjct: 248 VDTAFADLPANVRLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGR 307

Query: 305 FTLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKPAN 364
           FTLNISRV GSV I+TGIVQASVTQTVFDQ PVAIFGVSEVLLP+EIFG NP+MT KP  
Sbjct: 308 FTLNISRVKGSVAIDTGIVQASVTQTVFDQNPVAIFGVSEVLLPREIFGKNPIMTAKPGA 367

Query: 365 ETMVSAQPPDAVAA--MSPQSNGPPLHLSSPPGYREEIRSVAA 403
             + SAQPPD   +   SP  +GPP HLSSPPG+REEIRS A+
Sbjct: 368 PFVDSAQPPDIALSPEFSPGFDGPPSHLSSPPGFREEIRSEAS 410

[Close]

BLAST of Carg12368 vs. TrEMBL
Match: tr|A5BM05|A5BM05_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_006797 PE=4 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 5.5e-138
Identity = 276/403 (68.49%), Postives = 315/403 (78.16%), Query Frame = 0


Query: 4   RISHFTPIPSLFFLLLLLSSXXLSPVLALDI-XXXXXXXXXXXXXXXXXXXXXXXXXXXX 63
           RISHF P   ++FLLL  S     P++AL+I                             
Sbjct: 5   RISHFAPTAIVYFLLLSSS----YPIVALNITSLLSTYPDLSDFANLLTATAVDGDLIHR 64

Query: 64  XXXTLLAVPNSYLAASSDLTHRIPQSSLADVLRYHVLLQYLSPSDLRQISPSGKLVTTLF 123
              TLLAVPNS+L  SSDLTHR   SSLADV+RYHVLLQYLS  D+RQI  +GKL+TTL+
Sbjct: 65  SSLTLLAVPNSFL-RSSDLTHRSSASSLADVIRYHVLLQYLSWPDIRQIPAAGKLITTLY 124

Query: 124 QTTGRATSDFGSVNITRDPLDGLVSVHSPVPFSSSNATVLTLLKNLPYNVSIFAVNALLV 183
           QTTGRATS+FGSVNITR+P +G VSVHSP  +S SNAT+L+L+K LPYNVSIF VN+LLV
Sbjct: 125 QTTGRATSNFGSVNITRNPANGAVSVHSPASYSPSNATILSLIKTLPYNVSIFTVNSLLV 184

Query: 184 PYGFDLMASETRPPLGLNITRALIDGHNFNVAASMLLASGVVDEFEADEGGAGITLFVPT 243
           PYGFDLMASE+RPPLGLNIT+ LIDGHNFNVAASML+ASGVV+EFEADE GAGIT+F+PT
Sbjct: 185 PYGFDLMASESRPPLGLNITKTLIDGHNFNVAASMLMASGVVEEFEADEAGAGITMFIPT 244

Query: 244 DSAFSDLPPTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGSF 303
           D AF+DLP T +LQSLPADKKAVVLKFHVLHSYY LGSLESIVNPVQPTLATE+MGA SF
Sbjct: 245 DDAFADLPTTERLQSLPADKKAVVLKFHVLHSYYTLGSLESIVNPVQPTLATEEMGAESF 304

Query: 304 TLNISRVNGSVGINTGIVQASVTQTVFDQKPVAIFGVSEVLLPKEIFGNNPMMTIKPA-- 363
           TLNISRVNGSV I++GIVQASVTQTVFDQ PVAIFGVS+VLLP+EIFGNNP+ T +P+  
Sbjct: 305 TLNISRVNGSVAIDSGIVQASVTQTVFDQNPVAIFGVSKVLLPREIFGNNPISTTRPSPN 364

Query: 364 NETMVSAQPPDAVAA--MSPQSNGPPLHLSSPPGYREEIRSVA 402
           NE   SAQPPD   +   SP S  PP  +SSPPG+ EE+RS A
Sbjct: 365 NEATGSAQPPDISXSPENSPGSYTPPSGMSSPPGFHEELRSEA 402

The following BLAST results are available for this feature:

BLAST of Carg12368 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997926.1	3.3e-195	90.82	fasciclin-like arabinogalactan protein 4 [Cucurbita maxima]	[more]
XP_022949328.1	7.7e-192	89.83	fasciclin-like arabinogalactan protein 4 [Cucurbita moschata] >XP_022949329.1 fa...	[more]
XP_023523051.1	1.3e-191	89.83	fasciclin-like arabinogalactan protein 4 [Cucurbita pepo subsp. pepo]	[more]
XP_004150187.1	1.3e-170	85.86	PREDICTED: fasciclin-like arabinogalactan protein 4 [Cucumis sativus] >KGN65714....	[more]
XP_022965003.1	9.1e-169	81.34	fasciclin-like arabinogalactan protein 4 [Cucurbita moschata]	[more]

BLAST of Carg12368 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G46550.1	1.1e-99	58.45	Fasciclin-like arabinogalactan family protein	[more]
AT3G60900.1	2.0e-32	33.80	FASCICLIN-like arabinogalactan-protein 10	[more]
AT2G45470.1	4.8e-31	34.60	FASCICLIN-like arabinogalactan protein 8	[more]
AT5G55730.1	2.1e-26	32.75	FASCICLIN-like arabinogalactan 1	[more]
AT4G12730.1	8.3e-23	31.69	FASCICLIN-like arabinogalactan 2	[more]

BLAST of Carg12368 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SNC3\|FLA4_ARATH	2.0e-98	58.45	Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana OX=3702 GN=FLA4...	[more]
sp\|Q9LZX4\|FLA10_ARATH	3.5e-31	33.80	Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
sp\|O22126\|FLA8_ARATH	8.7e-30	34.60	Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana OX=3702 GN=FLA8...	[more]
sp\|Q9FM65\|FLA1_ARATH	3.8e-25	32.75	Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLA1...	[more]
sp\|Q9SU13\|FLA2_ARATH	1.5e-21	31.69	Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2...	[more]

BLAST of Carg12368 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LXD7\|A0A0A0LXD7_CUCSA	8.4e-171	85.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G507470 PE=4 SV=1	[more]
tr\|A0A1S4E1I9\|A0A1S4E1I9_CUCME	6.1e-153	79.65	LOW QUALITY PROTEIN: fasciclin-like arabinogalactan protein 4 OS=Cucumis melo OX...	[more]
tr\|A0A2P5EJA5\|A0A2P5EJA5_9ROSA	1.3e-147	72.77	FAS1 domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_186260...	[more]
tr\|A0A2P5AJJ1\|A0A2P5AJJ1_PARAD	9.7e-143	70.72	FAS1 domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_32...	[more]
tr\|A5BM05\|A5BM05_VITVI	5.5e-138	68.49	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_006797 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR033254	Plant_FLA
IPR036378	FAS1_dom_sf
IPR000782	FAS1_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12368-RA	Carg12368-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 237..346 e-value: 3.1E-17 score: 73.3
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 210..345 e-value: 6.9E-17 score: 61.8
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 31..181 score: 9.189
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 198..343 score: 15.868
IPR036378	FAS1 domain superfamily	GENE3D	G3DSA:2.30.180.10		coord: 199..346 e-value: 9.0E-10 score: 40.7
IPR036378	FAS1 domain superfamily	SUPERFAMILY	SSF82153	FAS1 domain	coord: 205..346
IPR036378	FAS1 domain superfamily	SUPERFAMILY	SSF82153	FAS1 domain	coord: 30..183
IPR033254	Fasciclin-like arabinogalactan protein	PANTHER	PTHR32382	FAMILY NOT NAMED	coord: 3..402
None	No IPR available	PANTHER	PTHR32382:SF0	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4	coord: 3..402

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12368	Cla008246	Watermelon (97103) v1	carwmB0440
Carg12368	Csa1G507470	Cucumber (Chinese Long) v2	carcuB0471
Carg12368	MELO3C020643	Melon (DHL92) v3.5.1	carmeB0449
Carg12368	ClCG03G001570	Watermelon (Charleston Gray)	carwcgB0436
Carg12368	CSPI01G22990	Wild cucumber (PI 183967)	carcpiB0476
Carg12368	Cucsa.213860	Cucumber (Gy14) v1	carcgyB0512
Carg12368	CmaCh13G001310	Cucurbita maxima (Rimu)	carcmaB0610
Carg12368	CmoCh13G001300	Cucurbita moschata (Rifu)	carcmoB0594
Carg12368	Cp4.1LG20g08490	Cucurbita pepo (Zucchini)	carcpeB0620
Carg12368	Cp4.1LG02g13410	Cucurbita pepo (Zucchini)	carcpeB0622
Carg12368	CsGy1G022470	Cucumber (Gy14) v2	carcgybB0448
Carg12368	MELO3C020643.2	Melon (DHL92) v3.6.1	carmedB0451
Carg12368	CsaV3_1G034110	Cucumber (Chinese Long) v3	carcucB0472
Carg12368	Cla97C03G052500	Watermelon (97103) v2	carwmbB0467
Carg12368	Bhi08G000534	Wax gourd	carwgoB0535

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12368	Carg20662	Silver-seed gourd	carcarB408

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12368	Silver-seed gourd	carcarB192
Carg12368	Silver-seed gourd	carcarB332
Carg12368	Silver-seed gourd	carcarB353
Carg12368	Silver-seed gourd	carcarB449
Carg12368	Cucumber (Gy14) v2	carcgybB0453
Carg12368	Cucumber (Gy14) v2	carcgybB0452
Carg12368	Cucumber (Gy14) v2	carcgybB0450
Carg12368	Cucumber (Gy14) v1	carcgyB0510
Carg12368	Cucurbita maxima (Rimu)	carcmaB0613
Carg12368	Cucurbita maxima (Rimu)	carcmaB0612
Carg12368	Cucurbita maxima (Rimu)	carcmaB0615
Carg12368	Cucurbita maxima (Rimu)	carcmaB0618
Carg12368	Cucurbita moschata (Rifu)	carcmoB0595
Carg12368	Cucurbita moschata (Rifu)	carcmoB0596
Carg12368	Cucurbita moschata (Rifu)	carcmoB0598
Carg12368	Cucurbita moschata (Rifu)	carcmoB0601
Carg12368	Cucurbita pepo (Zucchini)	carcpeB0617
Carg12368	Cucurbita pepo (Zucchini)	carcpeB0619
Carg12368	Cucurbita pepo (Zucchini)	carcpeB0624
Carg12368	Wild cucumber (PI 183967)	carcpiB0481
Carg12368	Wild cucumber (PI 183967)	carcpiB0478
Carg12368	Cucumber (Chinese Long) v2	carcuB0473
Carg12368	Cucumber (Chinese Long) v2	carcuB0475
Carg12368	Cucumber (Chinese Long) v3	carcucB0475
Carg12368	Cucumber (Chinese Long) v3	carcucB0477
Carg12368	Melon (DHL92) v3.5.1	carmeB0446
Carg12368	Bottle gourd (USVL1VR-Ls)	carlsiB400
Carg12368	Bottle gourd (USVL1VR-Ls)	carlsiB403
Carg12368	Bottle gourd (USVL1VR-Ls)	carlsiB405
Carg12368	Melon (DHL92) v3.5.1	carmeB0450
Carg12368	Melon (DHL92) v3.6.1	carmedB0448
Carg12368	Melon (DHL92) v3.6.1	carmedB0453
Carg12368	Watermelon (Charleston Gray)	carwcgB0431
Carg12368	Watermelon (Charleston Gray)	carwcgB0435
Carg12368	Watermelon (97103) v1	carwmB0438
Carg12368	Watermelon (97103) v1	carwmB0441
Carg12368	Watermelon (97103) v1	carwmB0444
Carg12368	Watermelon (97103) v2	carwmbB0463
Carg12368	Watermelon (97103) v2	carwmbB0466
Carg12368	Wax gourd	carwgoB0529