Carg12362 (gene) Silver-seed gourd

Overview
NameCarg12362
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionWUSCHEL-related homeobox like
LocationCucurbita_argyrosperma_scaffold_074 : 560054 .. 560767 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTACGGCGGAGATAGGCGGAACTCCGGTGAGCTCACGGTGGAATCCGACGAAGGAGCAAATAAGCATTTTGGAGAACTTGTATGAACAAGGTGTGAGAACGCCGAGTGCTGAGCAAATACAACAGATTACGAATCGGCTTAAGAGTTATGGGCATATTGAAGGCAAAAATGTGTTCTATTGGTTTCAAAATCACAAAGCAAGGCAAAGACAGAAGCAAAAGCAAGACCATTCCGCCACTTTGGCTTATTTTAATCACTTTCTTCCTCTTCCACCTTTTGCTCCTCATTTTCCTTCCCCAAATGGTTGCTTCTTCCTTCTTTTCTTTTTTTTTTTTTTTTTTCTATGGCTAAAGGGGTTTTTTTTTTTTTTTTTTTGGCTAAATTTTCAATTTTTTTTATGAACAGTGGTTTGCAGCCCATACTACGTACATCAGAACAACGTCGGGGTTTATCCACAGCAACAAAGCAATTCCAAGATGAGGAGATCACATAATGGCGGCTTTGGGTACCAATCATGTCAAAATGACAACCCCACCACCCAAACTCTCTCTCTTTTTCCCACTCACCCAACTGGAGATTTACAAGCTGGACCGCCGCCGTCTCCGCCGCACGCGGAGGCGGCAACGGCGACGGCGTCGGCATCTTCTGGAATGTCTGCCGACGAGTCTTCTGGCGGCTGTCGGACTTACTTTGAATTTTTTCTGTAA

mRNA sequence

ATGGAAGCTACGGCGGAGATAGGCGGAACTCCGGTGAGCTCACGGTGGAATCCGACGAAGGAGCAAATAAGCATTTTGGAGAACTTGTATGAACAAGGTGTGAGAACGCCGAGTGCTGAGCAAATACAACAGATTACGAATCGGCTTAAGAGTTATGGGCATATTGAAGGCAAAAATGTGTTCTATTGGTTTCAAAATCACAAAGCAAGGCAAAGACAGAAGCAAAAGCAAGACCATTCCGCCACTTTGGCTTATTTTAATCACTTTCTTCCTCTTCCACCTTTTGCTCCTCATTTTCCTTCCCCAAATGTGGTTTGCAGCCCATACTACGTACATCAGAACAACGTCGGGGTTTATCCACAGCAACAAAGCAATTCCAAGATGAGGAGATCACATAATGGCGGCTTTGGGTACCAATCATGTCAAAATGACAACCCCACCACCCAAACTCTCTCTCTTTTTCCCACTCACCCAACTGGAGATTTACAAGCTGGACCGCCGCCGTCTCCGCCGCACGCGGAGGCGGCAACGGCGACGGCGTCGGCATCTTCTGGAATGTCTGCCGACGAGTCTTCTGGCGGCTGTCGGACTTACTTTGAATTTTTTCTGTAA

Coding sequence (CDS)

ATGGAAGCTACGGCGGAGATAGGCGGAACTCCGGTGAGCTCACGGTGGAATCCGACGAAGGAGCAAATAAGCATTTTGGAGAACTTGTATGAACAAGGTGTGAGAACGCCGAGTGCTGAGCAAATACAACAGATTACGAATCGGCTTAAGAGTTATGGGCATATTGAAGGCAAAAATGTGTTCTATTGGTTTCAAAATCACAAAGCAAGGCAAAGACAGAAGCAAAAGCAAGACCATTCCGCCACTTTGGCTTATTTTAATCACTTTCTTCCTCTTCCACCTTTTGCTCCTCATTTTCCTTCCCCAAATGTGGTTTGCAGCCCATACTACGTACATCAGAACAACGTCGGGGTTTATCCACAGCAACAAAGCAATTCCAAGATGAGGAGATCACATAATGGCGGCTTTGGGTACCAATCATGTCAAAATGACAACCCCACCACCCAAACTCTCTCTCTTTTTCCCACTCACCCAACTGGAGATTTACAAGCTGGACCGCCGCCGTCTCCGCCGCACGCGGAGGCGGCAACGGCGACGGCGTCGGCATCTTCTGGAATGTCTGCCGACGAGTCTTCTGGCGGCTGTCGGACTTACTTTGAATTTTTTCTGTAA

Protein sequence

MEATAEIGGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNHKARQRQKQKQDHSATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYPQQQSNSKMRRSHNGGFGYQSCQNDNPTTQTLSLFPTHPTGDLQAGPPPSPPHAEAATATASASSGMSADESSGGCRTYFEFFL
Homology
[Close]
BLAST of Carg12362 vs. NCBI nr
Match: XP_022998665.1 (WUSCHEL-related homeobox 2-like [Cucurbita maxima])

HSP 1 Score: 328.2 bits (840), Expect = 2.0e-86
Identity = 184/213 (86.38%), Postives = 186/213 (87.32%), Query Frame = 0 

Query: 1   MEATAEIGGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNV 60
           MEATAEIGGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNV
Sbjct: 1   MEATAEIGGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNV 60

Query: 61  FYWFQNHKARQRQKQKQDHSATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYP 120
           FYWFQNHKARQ      DH+ATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYP
Sbjct: 61  FYWFQNHKARQXXXXXXDHTATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYP 120

Query: 121 QQQSNSKMRRS--------HNGGFGYQSCQNDNPTTQTLSLFPTHPTGDLQAGP--PXXX 180
            QQSNS  RRS        +N GFGYQSCQ DNP TQTL LFPTHPTGDLQ GP   XXX
Sbjct: 121 HQQSNSTTRRSNSERRSCTNNPGFGYQSCQTDNPATQTLPLFPTHPTGDLQVGPXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXMSADESSGGCRTYFEFFL 204
           XXXXXXXXXXXXXXX  ADESSGGCRTYFEFFL
Sbjct: 181 XXXXXXXXXXXXXXXXXADESSGGCRTYFEFFL 213

[Close]
BLAST of Carg12362 vs. NCBI nr
Match: XP_022158904.1 (WUSCHEL-related homeobox 2 [Momordica charantia])

HSP 1 Score: 201.4 bits (511), Expect = 2.8e-48
Identity = 115/213 (53.99%), Postives = 130/213 (61.03%), Query Frame = 0 

Query: 5   AEIGGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWF 64
           +E+GG P SSRWNPTKEQI ILENLY+QGVRTPSA+QI +ITN LK+YGHIEGKNVFYWF
Sbjct: 9   SEVGGAPASSRWNPTKEQIGILENLYKQGVRTPSADQIHEITNSLKAYGHIEGKNVFYWF 68

Query: 65  QNHKARQRQKQKQDHSATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYPQQQS 124
           QNHKAR          A  ++F HF   P     + SPNV CSPYYVHQN+VG+YP   +
Sbjct: 69  QNHKARXXXXXXXXXLALFSHFLHFNSNP-----YSSPNVGCSPYYVHQNDVGLYPPYHN 128

Query: 125 NSKM--------------RRSHNGGFGYQSCQNDNPTTQTLSLFPTHPTGDLQAGPPXXX 184
           NSK               RR+ NG     S  N N  T+TLSLFPTHPTGDLQ GP    
Sbjct: 129 NSKALQSSGIARRRSKSERRNSNGEIEV-SAINLNIQTETLSLFPTHPTGDLQVGP---- 188

Query: 185 XXXXXXXXXXXXXXXMSADESSGGCRTYFEFFL 204
                           SA  SS G  TYF+FFL
Sbjct: 189 ---LPPTSSETSADHSSAGVSSSGRGTYFDFFL 208

[Close]
BLAST of Carg12362 vs. NCBI nr
Match: XP_015079052.1 (PREDICTED: WUSCHEL-related homeobox 2-like [Solanum pennellii])

HSP 1 Score: 182.2 bits (461), Expect = 1.8e-42
Identity = 99/173 (57.23%), Postives = 116/173 (67.05%), Query Frame = 0 

Query: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67
           GG+PV  RWNPTKEQI +LE+LY+QG+RTPSA+QIQQIT RL+++GHIEGKNVFYWFQNH
Sbjct: 12  GGSPVGCRWNPTKEQIDLLESLYKQGIRTPSADQIQQITGRLRAFGHIEGKNVFYWFQNH 71

Query: 68  KARQRQKQKQDHSATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYPQQQSNSK 127
           KARQRQKQKQD     AY+N FL      P    PNVVCSPYY  QNN+G Y Q  +   
Sbjct: 72  KARQRQKQKQD---KFAYYNRFLHRTSVFPPPNCPNVVCSPYYTAQNNLGFYQQYPAVPS 131

Query: 128 MRRSHNGGFGYQSC----------QNDNP-------TTQTLSLFPTHPTGDLQ 164
           M     GGF  ++           QND+P       T +TL+LFP HPTG LQ
Sbjct: 132 MIIPGPGGFKRRATCNQETLNLCEQNDSPNANKEFITQETLNLFPLHPTGVLQ 181

[Close]
BLAST of Carg12362 vs. NCBI nr
Match: XP_004242075.3 (WUSCHEL-related homeobox 2 [Solanum lycopersicum])

HSP 1 Score: 180.3 bits (456), Expect = 6.8e-42
Identity = 98/173 (56.65%), Postives = 116/173 (67.05%), Query Frame = 0 

Query: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67
           GG+PV  RWNPTKEQI +LE+LY+QG+RTPSA+QIQQIT RL+++GHIEGKNVFYWFQNH
Sbjct: 12  GGSPVGCRWNPTKEQIDLLESLYKQGIRTPSADQIQQITGRLRAFGHIEGKNVFYWFQNH 71

Query: 68  KARQRQKQKQDHSATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYPQQQSNSK 127
           KARQRQKQKQD     AY+N FL      P    PNVVCSPYY  QNN+G Y Q  +   
Sbjct: 72  KARQRQKQKQD---KFAYYNRFLHRTSVFPPPNCPNVVCSPYYTAQNNLGFYQQYPAVPS 131

Query: 128 MRRSHNGGFGYQSC----------QNDNP-------TTQTLSLFPTHPTGDLQ 164
           M     GGF  ++           QN++P       T +TL+LFP HPTG LQ
Sbjct: 132 MIIPGPGGFKRRATCNQETLNLCEQNNSPNANKEFITQETLNLFPLHPTGVLQ 181

[Close]
BLAST of Carg12362 vs. NCBI nr
Match: XP_006350912.1 (PREDICTED: WUSCHEL-related homeobox 2 [Solanum tuberosum])

HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 100/173 (57.80%), Postives = 115/173 (66.47%), Query Frame = 0 

Query: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67
           GGTPV  RWNPTKEQI +LE+LY+QG+RTPSAEQIQQIT RL+++GHIEGKNVFYWFQNH
Sbjct: 14  GGTPVGCRWNPTKEQIDLLESLYKQGIRTPSAEQIQQITGRLRAFGHIEGKNVFYWFQNH 73

Query: 68  KARQRQKQKQDHSATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYPQQQSNSK 127
           KARQRQKQKQD     AY+N FL      P    PNVVCSPYY  QNN+G Y Q  S   
Sbjct: 74  KARQRQKQKQD---KFAYYNRFLHRTSVFPPPNCPNVVCSPYYTAQNNLGFYQQYPS--- 133

Query: 128 MRRSHNGGFGYQS---------CQNDNPTT--------QTLSLFPTHPTGDLQ 164
           M     GGF  ++         C+ +N T         +TL+LFP HPTG LQ
Sbjct: 134 MIIPGPGGFKRRATCNQETLNLCEQNNITNANKEFINQETLNLFPLHPTGVLQ 180

[Close]
BLAST of Carg12362 vs. TAIR10
Match: AT5G59340.1 (WUSCHEL related homeobox 2)

HSP 1 Score: 125.2 bits (313), Expect = 4.7e-29
Identity = 66/107 (61.68%), Postives = 78/107 (72.90%), Query Frame = 0 

Query: 9   GTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNHK 68
           GT  SSRWNPTK+QI++LENLY++G+RTPSA+QIQQIT RL++YGHIEGKNVFYWFQNHK
Sbjct: 8   GTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHK 67

Query: 69  ARQRQKQKQDHSATLAYFNHFL-PLPPFAPHFPSPNVVC-SPYYVHQ 114
           ARQ      +    +AYFN  L     F    P  NV C SPYY+ Q
Sbjct: 68  ARQXXXXXXER---MAYFNRLLHKTSRFFYPPPCSNVGCVSPYYLQQ 111

[Close]
BLAST of Carg12362 vs. TAIR10
Match: AT1G46480.1 (WUSCHEL related homeobox 4)

HSP 1 Score: 107.5 bits (267), Expect = 1.0e-23
Identity = 68/165 (41.21%), Postives = 91/165 (55.15%), Query Frame = 0 

Query: 11  PVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNHKAR 70
           P  +RWNPT+EQI ILE LY+ G+RTP+A+QI+ IT +L  YG IEGKNVFYWFQNHKAR
Sbjct: 86  PGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKAR 145

Query: 71  QRQKQKQDHSATLAYFNHFLPLPPFAPHFPSPNVVCSPY-YVHQNNVGVYPQQQSNSKMR 130
           +RQKQK+++  +L+  + F     F P         S    + +  V      + N   R
Sbjct: 146 ERQKQKRNNLISLSCQSSFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELVEENEYKR 205

Query: 131 RSHNGGF---GYQSCQNDNPTTQ-----------TLSLFPTHPTG 161
              + GF     ++ +N N +T            TL LFP HP G
Sbjct: 206 TCRSWGFENLEIENRRNKNSSTMATTFNKIIDNVTLELFPLHPEG 250

[Close]
BLAST of Carg12362 vs. TAIR10
Match: AT3G18010.1 (WUSCHEL related homeobox 1)

HSP 1 Score: 105.5 bits (262), Expect = 3.8e-23
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 0 

Query: 12  VSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNHKARQ 71
           VSSRWNPT +Q+ +LE LY QG RTPSA+ IQQIT +L+ YG IEGKNVFYWFQNHKAR+
Sbjct: 73  VSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARE 132

Query: 72  RQKQKQ 78
           RQK+++
Sbjct: 133 RQKRRR 138

[Close]
BLAST of Carg12362 vs. TAIR10
Match: AT2G01500.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 6.1e-21
Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 0 

Query: 15  RWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNHKARQRQK 74
           RWNPT EQI+ LE LY  G RTP+ EQIQQI ++L+ YG IEGKNVFYWFQNHKAR+R K
Sbjct: 61  RWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLK 120

Query: 75  QKQ 78
           +++
Sbjct: 121 RRR 123

[Close]
BLAST of Carg12362 vs. TAIR10
Match: AT2G17950.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 4.4e-19
Identity = 42/65 (64.62%), Postives = 54/65 (83.08%), Query Frame = 0 

Query: 13  SSRWNPTKEQISILENL-YEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNHKARQ 72
           S+RW PT EQI IL+ L Y   +R+P+A+QIQ+IT RL+ +G IEGKNVFYWFQNHKAR+
Sbjct: 36  STRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARE 95

Query: 73  RQKQK 77
           RQK++
Sbjct: 96  RQKKR 100

[Close]
BLAST of Carg12362 vs. Swiss-Prot
Match: sp|Q6X7K1|WOX2_ARATH (WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.5e-28
Identity = 66/107 (61.68%), Postives = 78/107 (72.90%), Query Frame = 0 

Query: 9   GTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNHK 68
           GT  SSRWNPTK+QI++LENLY++G+RTPSA+QIQQIT RL++YGHIEGKNVFYWFQNHK
Sbjct: 8   GTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHK 67

Query: 69  ARQRQKQKQDHSATLAYFNHFL-PLPPFAPHFPSPNVVC-SPYYVHQ 114
           ARQ      +    +AYFN  L     F    P  NV C SPYY+ Q
Sbjct: 68  ARQXXXXXXER---MAYFNRLLHKTSRFFYPPPCSNVGCVSPYYLQQ 111

[Close]
BLAST of Carg12362 vs. Swiss-Prot
Match: sp|Q6X7J9|WOX4_ARATH (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-22
Identity = 68/165 (41.21%), Postives = 91/165 (55.15%), Query Frame = 0 

Query: 11  PVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNHKAR 70
           P  +RWNPT+EQI ILE LY+ G+RTP+A+QI+ IT +L  YG IEGKNVFYWFQNHKAR
Sbjct: 86  PGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKAR 145

Query: 71  QRQKQKQDHSATLAYFNHFLPLPPFAPHFPSPNVVCSPY-YVHQNNVGVYPQQQSNSKMR 130
           +RQKQK+++  +L+  + F     F P         S    + +  V      + N   R
Sbjct: 146 ERQKQKRNNLISLSCQSSFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELVEENEYKR 205

Query: 131 RSHNGGF---GYQSCQNDNPTTQ-----------TLSLFPTHPTG 161
              + GF     ++ +N N +T            TL LFP HP G
Sbjct: 206 TCRSWGFENLEIENRRNKNSSTMATTFNKIIDNVTLELFPLHPEG 250

[Close]
BLAST of Carg12362 vs. Swiss-Prot
Match: sp|Q6X7K0|WOX1_ARATH (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 105.5 bits (262), Expect = 6.9e-22
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 0 

Query: 12  VSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNHKARQ 71
           VSSRWNPT +Q+ +LE LY QG RTPSA+ IQQIT +L+ YG IEGKNVFYWFQNHKAR+
Sbjct: 73  VSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARE 132

Query: 72  RQKQKQ 78
           RQK+++
Sbjct: 133 RQKRRR 138

[Close]
BLAST of Carg12362 vs. Swiss-Prot
Match: sp|A2WWU7|WOX5_ORYSI (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.1e-22
Identity = 52/90 (57.78%), Postives = 62/90 (68.89%), Query Frame = 0 

Query: 13  SSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNHKARQR 72
           ++RW PTKEQI++LE LY QG+RTP+AEQIQQIT RL+ +GHIEGKNVFYWFQNHKARQ 
Sbjct: 42  NARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQX 101

Query: 73  QKQKQDHSATLAYFNHFLPLPPFAPHFPSP 103
                    +  YF+     PP  P    P
Sbjct: 102 XXXXXQ---SFDYFSKLFRRPPPLPVLHRP 128

[Close]
BLAST of Carg12362 vs. Swiss-Prot
Match: sp|Q8LR86|WOX5_ORYSJ (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.1e-22
Identity = 52/90 (57.78%), Postives = 62/90 (68.89%), Query Frame = 0 

Query: 13  SSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNHKARQR 72
           ++RW PTKEQI++LE LY QG+RTP+AEQIQQIT RL+ +GHIEGKNVFYWFQNHKARQ 
Sbjct: 42  NARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQX 101

Query: 73  QKQKQDHSATLAYFNHFLPLPPFAPHFPSP 103
                    +  YF+     PP  P    P
Sbjct: 102 XXXXXQ---SFDYFSKLFRRPPPLPVLHRP 128

[Close]
BLAST of Carg12362 vs. TrEMBL
Match: tr|M1CZ36|M1CZ36_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102585727 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.6e-42
Identity = 100/173 (57.80%), Postives = 115/173 (66.47%), Query Frame = 0 

Query: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67
           GGTPV  RWNPTKEQI +LE+LY+QG+RTPSAEQIQQIT RL+++GHIEGKNVFYWFQNH
Sbjct: 14  GGTPVGCRWNPTKEQIDLLESLYKQGIRTPSAEQIQQITGRLRAFGHIEGKNVFYWFQNH 73

Query: 68  KARQRQKQKQDHSATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYPQQQSNSK 127
           KARQRQKQKQD     AY+N FL      P    PNVVCSPYY  QNN+G Y Q  S   
Sbjct: 74  KARQRQKQKQD---KFAYYNRFLHRTSVFPPPNCPNVVCSPYYTAQNNLGFYQQYPS--- 133

Query: 128 MRRSHNGGFGYQS---------CQNDNPTT--------QTLSLFPTHPTGDLQ 164
           M     GGF  ++         C+ +N T         +TL+LFP HPTG LQ
Sbjct: 134 MIIPGPGGFKRRATCNQETLNLCEQNNITNANKEFINQETLNLFPLHPTGVLQ 180

[Close]
BLAST of Carg12362 vs. TrEMBL
Match: tr|A0A1Q3AQ94|A0A1Q3AQ94_CEPFO (Homeobox domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_01445 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.9e-41
Identity = 99/187 (52.94%), Postives = 120/187 (64.17%), Query Frame = 0 

Query: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67
           GGTP SSRWNPTKEQIS+LE LY QG+RTP+A+QIQQIT+RL++YGHIEGKNVFYWFQNH
Sbjct: 12  GGTPTSSRWNPTKEQISMLEGLYRQGIRTPTADQIQQITSRLRAYGHIEGKNVFYWFQNH 71

Query: 68  KARQRQKQKQDHSATLAYFNHFL--PLPPFAPHFPSPNVVCSPYYVHQNNVGVYPQQQS- 127
           KARQRQKQ+Q+   ++AY N F+   LP F P    PNVVCSPYY+ Q+++G+YP  QS 
Sbjct: 72  KARQRQKQRQE---SMAYINRFIHTTLPMFPP--SCPNVVCSPYYLPQSDLGIYPPYQSP 131

Query: 128 ------NSKMRRS-------------------HNGGFGYQSCQND-NPTTQTLSLFPTHP 166
                     RR+                   H       +C ND N   +TL+LFP HP
Sbjct: 132 KVPLPAGGYRRRTRVDKTKKTITYGIPGFDPMHASYLNEGTCHNDGNSKQETLALFPLHP 191

[Close]
BLAST of Carg12362 vs. TrEMBL
Match: tr|K4C9W1|K4C9W1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.9e-40
Identity = 98/176 (55.68%), Postives = 116/176 (65.91%), Query Frame = 0 

Query: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67
           GG+PV  RWNPTKEQI +LE+LY+QG+RTPSA+QIQQIT RL+++GHIEGKNVFYWFQNH
Sbjct: 12  GGSPVGCRWNPTKEQIDLLESLYKQGIRTPSADQIQQITGRLRAFGHIEGKNVFYWFQNH 71

Query: 68  KARQRQKQKQDHSATLAYFNHFLPLPPFAPHFPSPN---VVCSPYYVHQNNVGVYPQQQS 127
           KARQRQKQKQD     AY+N FL      P    PN   VVCSPYY  QNN+G Y Q  +
Sbjct: 72  KARQRQKQKQD---KFAYYNRFLHRTSVFPPPNCPNGFVVVCSPYYTAQNNLGFYQQYPA 131

Query: 128 NSKMRRSHNGGFGYQSC----------QNDNP-------TTQTLSLFPTHPTGDLQ 164
              M     GGF  ++           QN++P       T +TL+LFP HPTG LQ
Sbjct: 132 VPSMIIPGPGGFKRRATCNQETLNLCEQNNSPNANKEFITQETLNLFPLHPTGVLQ 184

[Close]
BLAST of Carg12362 vs. TrEMBL
Match: tr|A0A1U8H059|A0A1U8H059_CAPAN (WUSCHEL-related homeobox 2 OS=Capsicum annuum OX=4072 GN=LOC107874623 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.6e-39
Identity = 99/182 (54.40%), Postives = 111/182 (60.99%), Query Frame = 0 

Query: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67
           GGTPV SRWNPTKEQI +LE+LY QG+RTPSAEQIQQIT RL+++GHIEGKNVFYWFQNH
Sbjct: 14  GGTPVGSRWNPTKEQIDLLESLYGQGIRTPSAEQIQQITGRLRAFGHIEGKNVFYWFQNH 73

Query: 68  KARQRQKQKQDHSATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYPQQQSNSK 127
           KARQRQK+KQD     AYFN FL   P  P    PNVVCSPYY  Q+N+G Y Q      
Sbjct: 74  KARQRQKEKQD---KFAYFNQFLLRTPVFPPPNCPNVVCSPYYTPQSNLGFYQQYPVIQS 133

Query: 128 M---------RRS------HNGGFGYQSCQNDNP-----------TTQTLSLFPTHPTGD 164
           +         RR       HN       CQ  +              +TL LFP HPTG 
Sbjct: 134 VIIPGPGCFNRRETCDSTVHNMDATSTHCQVKSNMEYVVPDVRQFKQETLELFPLHPTGL 192

[Close]
BLAST of Carg12362 vs. TrEMBL
Match: tr|A0A1J6IBB8|A0A1J6IBB8_NICAT (Wuschel-related homeobox 2 OS=Nicotiana attenuata OX=49451 GN=WOX2 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.6e-39
Identity = 97/178 (54.49%), Postives = 110/178 (61.80%), Query Frame = 0 

Query: 10  TPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNHKA 69
           TPV SRWNPTKEQI +LE++Y QG+RTPSAEQIQQIT RL+++GHIEGKNVFYWFQNHKA
Sbjct: 15  TPVGSRWNPTKEQIDLLESIYRQGIRTPSAEQIQQITLRLRAFGHIEGKNVFYWFQNHKA 74

Query: 70  RQRQKQKQDHSATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYPQQQSNSKMR 129
           RQRQKQKQD     AYFNHFL      P  P PNVVC PYY  QNN+G Y Q    S + 
Sbjct: 75  RQRQKQKQD---KFAYFNHFLHRTNVFPP-PRPNVVCGPYYTPQNNLGFYQQYPVPSLIL 134

Query: 130 RSHNGGFGYQSC------------QNDNPTT------------QTLSLFPTHPTGDLQ 164
               G     +C            +N N               +TL+LFP HPTG LQ
Sbjct: 135 PGPGGFKRRATCDAAVYINATYSQENSNNMAHLSPNAKQFNHQETLNLFPLHPTGILQ 188

The following BLAST results are available for this feature:
BLAST of Carg12362 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022998665.12.0e-8686.38WUSCHEL-related homeobox 2-like [Cucurbita maxima][more]
XP_022158904.12.8e-4853.99WUSCHEL-related homeobox 2 [Momordica charantia][more]
XP_015079052.11.8e-4257.23PREDICTED: WUSCHEL-related homeobox 2-like [Solanum pennellii][more]
XP_004242075.36.8e-4256.65WUSCHEL-related homeobox 2 [Solanum lycopersicum][more]
XP_006350912.11.2e-4157.80PREDICTED: WUSCHEL-related homeobox 2 [Solanum tuberosum][more]
BLAST of Carg12362 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59340.14.7e-2961.68WUSCHEL related homeobox 2[more]
AT1G46480.11.0e-2341.21WUSCHEL related homeobox 4[more]
AT3G18010.13.8e-2371.21WUSCHEL related homeobox 1[more]
AT2G01500.16.1e-2168.25Homeodomain-like superfamily protein[more]
AT2G17950.14.4e-1964.62Homeodomain-like superfamily protein[more]
BLAST of Carg12362 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6X7K1|WOX2_ARATH8.5e-2861.68WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1[more]
sp|Q6X7J9|WOX4_ARATH1.8e-2241.21WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1[more]
sp|Q6X7K0|WOX1_ARATH6.9e-2271.21WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2[more]
sp|A2WWU7|WOX5_ORYSI9.1e-2257.78WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 S... [more]
sp|Q8LR86|WOX5_ORYSJ9.1e-2257.78WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2... [more]
BLAST of Carg12362 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|M1CZ36|M1CZ36_SOLTU7.6e-4257.80Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102585727 PE=4 SV=1[more]
tr|A0A1Q3AQ94|A0A1Q3AQ94_CEPFO2.9e-4152.94Homeobox domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... [more]
tr|K4C9W1|K4C9W1_SOLLC1.9e-4055.68Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1[more]
tr|A0A1U8H059|A0A1U8H059_CAPAN4.6e-3954.40WUSCHEL-related homeobox 2 OS=Capsicum annuum OX=4072 GN=LOC107874623 PE=4 SV=1[more]
tr|A0A1J6IBB8|A0A1J6IBB8_NICAT4.6e-3954.49Wuschel-related homeobox 2 OS=Nicotiana attenuata OX=49451 GN=WOX2 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR001356Homeobox_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12362-RACarg12362-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 11..78
e-value: 2.0E-6
score: 37.3
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 14..73
e-value: 8.1E-20
score: 70.3
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 9..74
score: 11.256
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 15..75
e-value: 2.94238E-8
score: 46.8529
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 13..80
e-value: 5.3E-11
score: 44.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..193
NoneNo IPR availablePANTHERPTHR24326:SF203WUSCHEL-RELATED HOMEOBOX 2coord: 8..131
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 8..131
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 13..77

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12362Cla008252Watermelon (97103) v1carwmB0440
Carg12362Csa1G505930Cucumber (Chinese Long) v2carcuB0471
Carg12362ClCG03G001630Watermelon (Charleston Gray)carwcgB0436
Carg12362CSPI01G22930Wild cucumber (PI 183967)carcpiB0476
Carg12362Cucsa.213810Cucumber (Gy14) v1carcgyB0512
Carg12362CmaCh01G005920Cucurbita maxima (Rimu)carcmaB0613
Carg12362Lsi02G013650Bottle gourd (USVL1VR-Ls)carlsiB403
Carg12362Cp4.1LG02g13460Cucurbita pepo (Zucchini)carcpeB0622
Carg12362CsGy1G022410Cucumber (Gy14) v2carcgybB0448
Carg12362MELO3C035340.2Melon (DHL92) v3.6.1carmedB0451
Carg12362CsaV3_1G034050Cucumber (Chinese Long) v3carcucB0472
Carg12362Cla97C03G052570Watermelon (97103) v2carwmbB0467
Carg12362Bhi08G000545Wax gourdcarwgoB0535
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg12362Wax gourdcarwgoB0529
Carg12362Silver-seed gourdcarcarB332
Carg12362Silver-seed gourdcarcarB353
Carg12362Silver-seed gourdcarcarB408
Carg12362Cucumber (Gy14) v2carcgybB0452
Carg12362Cucurbita maxima (Rimu)carcmaB0610
Carg12362Cucurbita maxima (Rimu)carcmaB0615
Carg12362Cucurbita moschata (Rifu)carcmoB0594
Carg12362Cucurbita moschata (Rifu)carcmoB0596
Carg12362Cucurbita moschata (Rifu)carcmoB0598
Carg12362Cucurbita pepo (Zucchini)carcpeB0617
Carg12362Cucurbita pepo (Zucchini)carcpeB0619
Carg12362Cucurbita pepo (Zucchini)carcpeB0620
Carg12362Cucurbita pepo (Zucchini)carcpeB0624
Carg12362Melon (DHL92) v3.5.1carmeB0446
Carg12362Bottle gourd (USVL1VR-Ls)carlsiB400
Carg12362Bottle gourd (USVL1VR-Ls)carlsiB405
Carg12362Melon (DHL92) v3.5.1carmeB0449
Carg12362Melon (DHL92) v3.6.1carmedB0448
Carg12362Watermelon (Charleston Gray)carwcgB0435
Carg12362Watermelon (97103) v1carwmB0441
Carg12362Watermelon (97103) v1carwmB0444