Carg12349 (gene) Silver-seed gourd

Overview
NameCarg12349
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionchitinase 2-like
LocationCucurbita_argyrosperma_scaffold_074 : 448718 .. 450286 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATGGATGGAATAATTGTTGTTCTTCTATTGATTCTGGTGGCTCCGCCGTCTAACACGGCGGTGGTAGTACCAGCGACAGTGTTTAGAGAATACATAGGAGCTGAGTTCAATGATGTCAAATTTTCCGACGTTCCGATTAACCCAAATGTAGAAGAGTTTCACTTTCTCCTGTCGTTTGCAATAGACTTTGACAGCTCCCGCCGTTGTTTCACTAATGGAGTATTCAACGTTTTCTGGGATTCCTATAATCTTAGCCCTTCCGCTGTTGCTGCCATTAAAAAGGTAATCAAACGTTCAACAACCCAATATTATACCTAAAAAAAATATATCCTTTTTTGAGGATAAACTCTCGTAGCTTTGTTTTTTGTTTCTTCGAAAGATCTCGTACCAATGGAGATACTCTTATTTGTTGGATGATGAAAGTTTCACGTCCACTAATTTAGAGAATGATTCTGAGTTTCTAATCAATGAATACTCTTTCCATTGGTACGAGGTCTTTTGGGAAGCCCAAAGCAAAGCCACTAGAGCTTATGCTTAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACATTATTTACTTATAAACTCACGATCTTCCTCTTAATTAGCTAATGTGGGACTACTCTTTTAATAATCCTCCCCTCGAGCAAAATACACCATAGAGCCTCCCCCTGAGGCCTATGAAGCCCTCGAACAAAGTACATCATTTGTTCGACACTCGAGTCACTTTTGACTCTAATACTATGTTAGGAATCACGACTCTCCACAATAATATGATATTGTCTACTTTGAGTATAAGCTCTCGTAGGTTTGTTTTTCGTTTCTCCAAAAAGTCTCGTGTCGTTAGAGATAGTATTCCTTACTTATAAACTCATAATTGTTCTCTTAATTACCGAACGAAATTACTCGTGCTTTAGGATCATTCAAACGTGAGAGTGGGTGTAAGTCTCGGAGGAGACAGCGTGGGAGACTCAGGCTTTGTTTATTTCAAACCTTCTTCAATAGCTTCATGGGTTTCCAACGCAGAACGTTCACTCACAAAGCTCATAAACACCTTCAATCTCGACGGCATCGACATCGATTACGAACACTTCGAGTCGGACCCCAACACATTCGCTGAGTGCATAGGGCAGCTAATTAGACGGCTAAAGAAGAAGGGAGTCATCTCATTTGCTTCCATTGCCCCTTTTGACGACGCTGAAGTTCAAACCCATTACTTAGCCTTATGGAAAAGATACGGGCACTTGATAGATTATGTTAATTTTCAATTCTATGCTTATGATAAGACCACCACAGTTCATCAGTTTATCAAACATTTCAAAGCTCAAAGCTCAAAGTATGAAGATGGTAGGATCCTGGCAAGCTTAGCCAGCGACGATAGCGGCGGATTGTTGCCAAAGCATGGGTTTTTTAAGGCGTGTCGAAGGCTTAGAACGGACAAACTCCTTCATGGAATCTTTATTTGGTCTGCAGATGATTCACAAGCTCGTGGTTTTAGGTATGAAAAGAAGGCACAAGCACTCCTACAAAGCCCCAACTACCACTATTGA

mRNA sequence

ATGGAAATGGATGGAATAATTGTTGTTCTTCTATTGATTCTGGTGGCTCCGCCGTCTAACACGGCGGTGGTAGTACCAGCGACAGTGTTTAGAGAATACATAGGAGCTGAGTTCAATGATGTCAAATTTTCCGACGTTCCGATTAACCCAAATGTAGAAGAGTTTCACTTTCTCCTGTCGTTTGCAATAGACTTTGACAGCTCCCGCCGTTGTTTCACTAATGGAGTATTCAACGTTTTCTGGGATTCCTATAATCTTAGCCCTTCCGCTGTTGCTGCCATTAAAAAGGATCATTCAAACGTGAGAGTGGGTGTAAGTCTCGGAGGAGACAGCGTGGGAGACTCAGGCTTTGTTTATTTCAAACCTTCTTCAATAGCTTCATGGGTTTCCAACGCAGAACGTTCACTCACAAAGCTCATAAACACCTTCAATCTCGACGGCATCGACATCGATTACGAACACTTCGAGTCGGACCCCAACACATTCGCTGAGTGCATAGGGCAGCTAATTAGACGGCTAAAGAAGAAGGGAGTCATCTCATTTGCTTCCATTGCCCCTTTTGACGACGCTGAAGTTCAAACCCATTACTTAGCCTTATGGAAAAGATACGGGCACTTGATAGATTATGTTAATTTTCAATTCTATGCTTATGATAAGACCACCACAGTTCATCAGTTTATCAAACATTTCAAAGCTCAAAGCTCAAAGTATGAAGATGGTAGGATCCTGGCAAGCTTAGCCAGCGACGATAGCGGCGGATTGTTGCCAAAGCATGGGTTTTTTAAGGCGTGTCGAAGGCTTAGAACGGACAAACTCCTTCATGGAATCTTTATTTGGTCTGCAGATGATTCACAAGCTCGTGGTTTTAGGTATGAAAAGAAGGCACAAGCACTCCTACAAAGCCCCAACTACCACTATTGA

Coding sequence (CDS)

ATGGAAATGGATGGAATAATTGTTGTTCTTCTATTGATTCTGGTGGCTCCGCCGTCTAACACGGCGGTGGTAGTACCAGCGACAGTGTTTAGAGAATACATAGGAGCTGAGTTCAATGATGTCAAATTTTCCGACGTTCCGATTAACCCAAATGTAGAAGAGTTTCACTTTCTCCTGTCGTTTGCAATAGACTTTGACAGCTCCCGCCGTTGTTTCACTAATGGAGTATTCAACGTTTTCTGGGATTCCTATAATCTTAGCCCTTCCGCTGTTGCTGCCATTAAAAAGGATCATTCAAACGTGAGAGTGGGTGTAAGTCTCGGAGGAGACAGCGTGGGAGACTCAGGCTTTGTTTATTTCAAACCTTCTTCAATAGCTTCATGGGTTTCCAACGCAGAACGTTCACTCACAAAGCTCATAAACACCTTCAATCTCGACGGCATCGACATCGATTACGAACACTTCGAGTCGGACCCCAACACATTCGCTGAGTGCATAGGGCAGCTAATTAGACGGCTAAAGAAGAAGGGAGTCATCTCATTTGCTTCCATTGCCCCTTTTGACGACGCTGAAGTTCAAACCCATTACTTAGCCTTATGGAAAAGATACGGGCACTTGATAGATTATGTTAATTTTCAATTCTATGCTTATGATAAGACCACCACAGTTCATCAGTTTATCAAACATTTCAAAGCTCAAAGCTCAAAGTATGAAGATGGTAGGATCCTGGCAAGCTTAGCCAGCGACGATAGCGGCGGATTGTTGCCAAAGCATGGGTTTTTTAAGGCGTGTCGAAGGCTTAGAACGGACAAACTCCTTCATGGAATCTTTATTTGGTCTGCAGATGATTCACAAGCTCGTGGTTTTAGGTATGAAAAGAAGGCACAAGCACTCCTACAAAGCCCCAACTACCACTATTGA

Protein sequence

MEMDGIIVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPNYHY
Homology
[Close]
BLAST of Carg12349 vs. NCBI nr
Match: XP_023524573.1 (chitinase 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565.8 bits (1457), Expect = 8.6e-158
Identity = 296/305 (97.05%), Postives = 298/305 (97.70%), Query Frame = 0 

Query: 1   MEMDGIXXXXXXXXXXXXXXXXXXXPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLS 60
           MEMDGIXXXXXXXXXXXXXXXXXXX ATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLS
Sbjct: 1   MEMDGIXXXXXXXXXXXXXXXXXXXXATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLS 60

Query: 61  FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYF 120
           FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKK+HSNVRVGVSLGGDSVGDSGFVYF
Sbjct: 61  FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKNHSNVRVGVSLGGDSVGDSGFVYF 120

Query: 121 KPSSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS 180
           KPSSIASWVSNAERSLTKLINTF LDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS
Sbjct: 121 KPSSIASWVSNAERSLTKLINTFKLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS 180

Query: 181 FASIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDG 240
           FASIAPFDD EVQ HYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSS YE G
Sbjct: 181 FASIAPFDDTEVQAHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGG 240

Query: 241 RILASLASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQ 300
           RILASLASDD+GGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQA GFRYEKKAQALLQ
Sbjct: 241 RILASLASDDTGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQ 300

Query: 301 SPNYH 306
           SPNYH
Sbjct: 301 SPNYH 305

[Close]
BLAST of Carg12349 vs. NCBI nr
Match: XP_022949055.1 (chitinase 2-like [Cucurbita moschata])

HSP 1 Score: 565.5 bits (1456), Expect = 1.1e-157
Identity = 274/278 (98.56%), Postives = 274/278 (98.56%), Query Frame = 0 

Query: 29  VFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYNLSP 88
           VFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYNLSP
Sbjct: 27  VFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYNLSP 86

Query: 89  SAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNLDGI 148
           SAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNLDGI
Sbjct: 87  SAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNLDGI 146

Query: 149 DIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGHLID 208
           DIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGHLID
Sbjct: 147 DIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGHLID 206

Query: 209 YVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDSGGLLPKHGFFKACRRLR 268
           YVNFQFYAYDKTTTVHQFIKHFKAQSS YE GRILASLASDDSGGLL KHGFFKACRRLR
Sbjct: 207 YVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRILASLASDDSGGLLSKHGFFKACRRLR 266

Query: 269 TDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPNYHY 307
           TDKLLHGIFIWSADDSQA GFRYEKKAQALLQSPNYHY
Sbjct: 267 TDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSPNYHY 304

[Close]
BLAST of Carg12349 vs. NCBI nr
Match: XP_004152902.1 (PREDICTED: chitinase 2-like [Cucumis sativus] >KGN65683.1 hypothetical protein Csa_1G496300 [Cucumis sativus])

HSP 1 Score: 477.2 bits (1227), Expect = 4.0e-131
Identity = 228/278 (82.01%), Postives = 253/278 (91.01%), Query Frame = 0 

Query: 26  PATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYN 85
           PA VFREYIGAEFN+VKFSDVPI+ NVEEFHFLLSFAIDFD+S R FTNG F+VFWDS N
Sbjct: 33  PANVFREYIGAEFNNVKFSDVPIHSNVEEFHFLLSFAIDFDASSRSFTNGAFDVFWDSDN 92

Query: 86  LSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNL 145
           L+PSAVA+IKKDHSNVRVGVSLGGD+V + G V+FKPSSI SWVSNAE SLTK+I T+NL
Sbjct: 93  LNPSAVASIKKDHSNVRVGVSLGGDTVDNGGSVFFKPSSIHSWVSNAEHSLTKIIKTYNL 152

Query: 146 DGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGH 205
           DGIDIDYEHF+SDP+TFAECIGQLI+RLKKKG+ISFASIAPFDD EVQ+HYLALWKRYGH
Sbjct: 153 DGIDIDYEHFKSDPDTFAECIGQLIKRLKKKGIISFASIAPFDDDEVQSHYLALWKRYGH 212

Query: 206 LIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDSGGLLPKHGFFKACR 265
           LIDYVNFQFYAYDK TT+ QFI+HFK Q S YE GRILASL SDDSGGL+PK+GFFKACR
Sbjct: 213 LIDYVNFQFYAYDKGTTIGQFIQHFKDQMSNYEGGRILASLVSDDSGGLVPKNGFFKACR 272

Query: 266 RLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPN 304
           RL+ +KLL+GIFIWSADDSQA+GF YEK AQ+LL  PN
Sbjct: 273 RLKKEKLLNGIFIWSADDSQAKGFDYEKTAQSLLAKPN 310

[Close]
BLAST of Carg12349 vs. NCBI nr
Match: XP_008457518.1 (PREDICTED: chitinase 2-like [Cucumis melo])

HSP 1 Score: 470.7 bits (1210), Expect = 3.8e-129
Identity = 225/279 (80.65%), Postives = 255/279 (91.40%), Query Frame = 0 

Query: 26  PATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYN 85
           PA VFREYIGAEFN+VKFSDVPI  N+EEFHFLLSFAIDFD+S R FTNG F+VFWDS N
Sbjct: 33  PANVFREYIGAEFNNVKFSDVPIRSNIEEFHFLLSFAIDFDASSRSFTNGAFDVFWDSDN 92

Query: 86  LSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNL 145
           L+PSAVA+IKKDHSNVRVGVSLGGD+V + GFV+FKPSSI SWVSNAE SLTK+INT+NL
Sbjct: 93  LNPSAVASIKKDHSNVRVGVSLGGDTVDNGGFVFFKPSSIHSWVSNAEHSLTKIINTYNL 152

Query: 146 DGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGH 205
           DGIDIDYEHF+SDP+TFAECIGQLI+RLKKKG+ISFASIAPFDD EVQ+HYLALW+ YGH
Sbjct: 153 DGIDIDYEHFKSDPDTFAECIGQLIKRLKKKGIISFASIAPFDDDEVQSHYLALWRSYGH 212

Query: 206 LIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDS-GGLLPKHGFFKAC 265
           LIDYVNFQFYAYDK TTV QFI+HFK Q S YE GR+LASLASD+S GGL+P++GFFKAC
Sbjct: 213 LIDYVNFQFYAYDKGTTVGQFIRHFKDQVSNYEGGRVLASLASDNSAGGLVPENGFFKAC 272

Query: 266 RRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPN 304
           RRL+ +KLL GIFIWSADDS+A+GF YEK+AQ+LL +PN
Sbjct: 273 RRLKREKLLDGIFIWSADDSKAKGFGYEKEAQSLLATPN 311

[Close]
BLAST of Carg12349 vs. NCBI nr
Match: XP_022156744.1 (chitinase 2-like [Momordica charantia])

HSP 1 Score: 468.0 bits (1203), Expect = 2.5e-128
Identity = 226/277 (81.59%), Postives = 249/277 (89.89%), Query Frame = 0 

Query: 27  ATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYNL 86
           A +FREYIGAEF DVKFSDVPINP+V EFHFLLSFAIDFD+SRR FTNG+FNVFWDS+NL
Sbjct: 29  AKLFREYIGAEFKDVKFSDVPINPDV-EFHFLLSFAIDFDASRRSFTNGIFNVFWDSHNL 88

Query: 87  SPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNLD 146
           +PS V AIKKDHSNV+VG+S+GGD+V  +GF YFKPSSI SWVSNAERSLTKLIN FNLD
Sbjct: 89  NPSDVVAIKKDHSNVKVGLSIGGDTV-PNGFAYFKPSSIDSWVSNAERSLTKLINAFNLD 148

Query: 147 GIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGHL 206
            IDIDYEHF+SDPNTFAECIG+LI+RLKKKG ISFASIAPFD AEVQ+HYLALW+ YGHL
Sbjct: 149 SIDIDYEHFKSDPNTFAECIGRLIKRLKKKGAISFASIAPFDKAEVQSHYLALWRSYGHL 208

Query: 207 IDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDSGGLLPKHGFFKACRR 266
           IDYVNFQFYAYDKTTTV QFI+HFKAQ+S YE GR+LASL SDDSGGLL ++GFF ACRR
Sbjct: 209 IDYVNFQFYAYDKTTTVPQFIQHFKAQTSNYEGGRVLASLVSDDSGGLLAENGFFTACRR 268

Query: 267 LRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPN 304
           LR +KLLHGIF+WSADDS A GF YEKKAQ LL  PN
Sbjct: 269 LRAEKLLHGIFVWSADDSIANGFGYEKKAQELLAMPN 303

[Close]
BLAST of Carg12349 vs. Swiss-Prot
Match: sp|Q9SLP4|CHIT1_TULBA (Chitinase 1 OS=Tulipa bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 5.1e-101
Identity = 179/280 (63.93%), Postives = 220/280 (78.57%), Query Frame = 0 

Query: 27  ATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDS-SRRCFTNGVFNVFWDSYN 86
           A VFREYIG++FNDVKFSDVPINP+V +FHF+L+FAID+ S S    TNG F  FWD+ N
Sbjct: 26  ALVFREYIGSQFNDVKFSDVPINPDV-DFHFILAFAIDYTSGSSPTPTNGNFKPFWDTNN 85

Query: 87  LSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNL 146
           LSPS VAA+K+ HSNV+V +SLGGDSVG    V+F PSS++SWV NA  SLT++I  ++L
Sbjct: 86  LSPSQVAAVKRTHSNVKVSLSLGGDSVGGKN-VFFSPSSVSSWVENAVSSLTRIIKQYHL 145

Query: 147 DGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGH 206
           DGIDIDYEHF+ DPNTFAECIGQL+ RLKK  V+SF SIAPFDDA+VQ+HY ALW++YGH
Sbjct: 146 DGIDIDYEHFKGDPNTFAECIGQLVTRLKKNEVVSFVSIAPFDDAQVQSHYQALWEKYGH 205

Query: 207 LIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDSGGLLPKHGFFKACR 266
            IDYVNFQFYAY   T+V QF+K+F+ QSS Y  G++L S ++D SGGL P +GFF+AC 
Sbjct: 206 QIDYVNFQFYAYSARTSVEQFLKYFEEQSSNYHGGKVLVSFSTDSSGGLKPDNGFFRACS 265

Query: 267 RLRTDKLLHGIFIWSADDSQARG--FRYEKKAQALLQSPN 304
            L+    LHGIF+WSADDS      FRYE +AQ++L S N
Sbjct: 266 ILKKQGKLHGIFVWSADDSLMSNNVFRYEMQAQSMLASVN 303

[Close]
BLAST of Carg12349 vs. Swiss-Prot
Match: sp|Q7M443|CHIT2_TULBA (Chitinase 2 OS=Tulipa bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.6e-99
Identity = 177/276 (64.13%), Postives = 218/276 (78.99%), Query Frame = 0 

Query: 29  VFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDS-SRRCFTNGVFNVFWDSYNLS 88
           +FREYIGA+FNDVKFSDVPINPNV +FHF+L+FAID+ S S    TNG FN FWD+ NLS
Sbjct: 2   LFREYIGAQFNDVKFSDVPINPNV-DFHFILAFAIDYTSGSSPTPTNGNFNPFWDTNNLS 61

Query: 89  PSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNLDG 148
           PS VAAIK+ ++NV+V VSLGG+SVG    V+F PSS++SWV NA  SLTK+I  ++LDG
Sbjct: 62  PSQVAAIKRTYNNVKVSVSLGGNSVGGER-VFFNPSSVSSWVDNAVSSLTKIIKQYHLDG 121

Query: 149 IDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGHLI 208
           IDIDYEHF+ DPNTFAECIGQL+ RLKK GV+SF SIAPFDDA+VQ+HY ALW++YGH I
Sbjct: 122 IDIDYEHFKGDPNTFAECIGQLVTRLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQI 181

Query: 209 DYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDSGGLLPKHGFFKACRRL 268
           DYVNFQFY Y    +V QF+K+F+ Q S Y  G++L S ++D+SGGL P++GFF AC  L
Sbjct: 182 DYVNFQFYVYSSRMSVEQFLKYFEMQRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSIL 241

Query: 269 RTDKLLHGIFIWSADDSQARG--FRYEKKAQALLQS 302
           +    LHGIF+WSADDS      F+YE +AQ+LL S
Sbjct: 242 KKQGKLHGIFVWSADDSLMSNDVFKYEMQAQSLLAS 275

[Close]
BLAST of Carg12349 vs. Swiss-Prot
Match: sp|P39657|RUAP_SOYBN (RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.8e-21
Identity = 65/188 (34.57%), Postives = 93/188 (49.47%), Query Frame = 0 

Query: 29  VFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYNLSP 88
           VFRE+     +D  F +  I  N+ EF   LS A D+D +    TNG F  +WD+  ++P
Sbjct: 7   VFREFT----SDDSFLNQVIPENITEFQVTLSLARDYDGNNS--TNGKFIPYWDTEKVTP 66

Query: 89  SAVAAIKKDHS----NVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFN 148
             +   KK +      V+V VS+G  +     F     S+  +WVS A  SL  +I T+N
Sbjct: 67  EVIKKFKKKYEPTALRVKVLVSIGNKN-KQFPFTIGSDSNSEAWVSEATASLKSIIKTYN 126

Query: 149 LDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYG 208
           LDGID+ YE   ++   F   +G L+R LK+  +I+ AS A   DA     Y  L+  Y 
Sbjct: 127 LDGIDVSYEDIAANEADFVNSVGGLVRNLKQNKLITVASFATSADAANNKFYNLLYAEYA 186

Query: 209 HLIDYVNF 213
              D V F
Sbjct: 187 TFFDTVVF 187

[Close]
BLAST of Carg12349 vs. TrEMBL
Match: tr|A0A0A0LV90|A0A0A0LV90_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G496300 PE=3 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 2.7e-131
Identity = 228/278 (82.01%), Postives = 253/278 (91.01%), Query Frame = 0 

Query: 26  PATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYN 85
           PA VFREYIGAEFN+VKFSDVPI+ NVEEFHFLLSFAIDFD+S R FTNG F+VFWDS N
Sbjct: 33  PANVFREYIGAEFNNVKFSDVPIHSNVEEFHFLLSFAIDFDASSRSFTNGAFDVFWDSDN 92

Query: 86  LSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNL 145
           L+PSAVA+IKKDHSNVRVGVSLGGD+V + G V+FKPSSI SWVSNAE SLTK+I T+NL
Sbjct: 93  LNPSAVASIKKDHSNVRVGVSLGGDTVDNGGSVFFKPSSIHSWVSNAEHSLTKIIKTYNL 152

Query: 146 DGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGH 205
           DGIDIDYEHF+SDP+TFAECIGQLI+RLKKKG+ISFASIAPFDD EVQ+HYLALWKRYGH
Sbjct: 153 DGIDIDYEHFKSDPDTFAECIGQLIKRLKKKGIISFASIAPFDDDEVQSHYLALWKRYGH 212

Query: 206 LIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDSGGLLPKHGFFKACR 265
           LIDYVNFQFYAYDK TT+ QFI+HFK Q S YE GRILASL SDDSGGL+PK+GFFKACR
Sbjct: 213 LIDYVNFQFYAYDKGTTIGQFIQHFKDQMSNYEGGRILASLVSDDSGGLVPKNGFFKACR 272

Query: 266 RLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPN 304
           RL+ +KLL+GIFIWSADDSQA+GF YEK AQ+LL  PN
Sbjct: 273 RLKKEKLLNGIFIWSADDSQAKGFDYEKTAQSLLAKPN 310

[Close]
BLAST of Carg12349 vs. TrEMBL
Match: tr|A0A1S3C5A3|A0A1S3C5A3_CUCME (chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103497192 PE=3 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 2.5e-129
Identity = 225/279 (80.65%), Postives = 255/279 (91.40%), Query Frame = 0 

Query: 26  PATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYN 85
           PA VFREYIGAEFN+VKFSDVPI  N+EEFHFLLSFAIDFD+S R FTNG F+VFWDS N
Sbjct: 33  PANVFREYIGAEFNNVKFSDVPIRSNIEEFHFLLSFAIDFDASSRSFTNGAFDVFWDSDN 92

Query: 86  LSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNL 145
           L+PSAVA+IKKDHSNVRVGVSLGGD+V + GFV+FKPSSI SWVSNAE SLTK+INT+NL
Sbjct: 93  LNPSAVASIKKDHSNVRVGVSLGGDTVDNGGFVFFKPSSIHSWVSNAEHSLTKIINTYNL 152

Query: 146 DGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGH 205
           DGIDIDYEHF+SDP+TFAECIGQLI+RLKKKG+ISFASIAPFDD EVQ+HYLALW+ YGH
Sbjct: 153 DGIDIDYEHFKSDPDTFAECIGQLIKRLKKKGIISFASIAPFDDDEVQSHYLALWRSYGH 212

Query: 206 LIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDS-GGLLPKHGFFKAC 265
           LIDYVNFQFYAYDK TTV QFI+HFK Q S YE GR+LASLASD+S GGL+P++GFFKAC
Sbjct: 213 LIDYVNFQFYAYDKGTTVGQFIRHFKDQVSNYEGGRVLASLASDNSAGGLVPENGFFKAC 272

Query: 266 RRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPN 304
           RRL+ +KLL GIFIWSADDS+A+GF YEK+AQ+LL +PN
Sbjct: 273 RRLKREKLLDGIFIWSADDSKAKGFGYEKEAQSLLATPN 311

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BLAST of Carg12349 vs. TrEMBL
Match: tr|M5VZB8|M5VZB8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G088400 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 6.8e-111
Identity = 198/275 (72.00%), Postives = 229/275 (83.27%), Query Frame = 0 

Query: 29  VFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYNLSP 88
           +FREYIGAEFNDVKFSDVPINPNV EFHF+LSFAID+D S    TNG FNVFWDS NLSP
Sbjct: 34  LFREYIGAEFNDVKFSDVPINPNV-EFHFILSFAIDYDPSGSSPTNGKFNVFWDSDNLSP 93

Query: 89  SAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNLDGI 148
           S V++IK  HSNV+V +SLGGDSV  SG  YFKPSSI SWVSNA  SLT +I  +NLDGI
Sbjct: 94  SQVSSIKNQHSNVKVALSLGGDSV-SSGSAYFKPSSIDSWVSNAVSSLTSIIQQYNLDGI 153

Query: 149 DIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGHLID 208
           DIDYEHF +DP+TF+ECIG+LI  LK  GVISFASIAPFDD +VQ+HYLALWK YGHLID
Sbjct: 154 DIDYEHFSADPDTFSECIGKLITTLKNNGVISFASIAPFDDDQVQSHYLALWKSYGHLID 213

Query: 209 YVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDSGGLLPKHGFFKACRRLR 268
           YVNFQFYAYD+ TTV QFI +FK QSS Y  G++LAS  SD SGGL P++GFF AC RL+
Sbjct: 214 YVNFQFYAYDQGTTVSQFINYFKTQSSNYNGGKVLASFISDGSGGLSPENGFFTACHRLK 273

Query: 269 TDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPN 304
           +++ LHGIF+WSADDS+  GFRYEK++QALL +P+
Sbjct: 274 SEQQLHGIFVWSADDSKKIGFRYEKQSQALLATPH 306

[Close]
BLAST of Carg12349 vs. TrEMBL
Match: tr|A0A2P6QI35|A0A2P6QI35_ROSCH (Putative chitinase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0062101 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 2.6e-110
Identity = 195/275 (70.91%), Postives = 233/275 (84.73%), Query Frame = 0 

Query: 29  VFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYNLSP 88
           +FREYIGAEFN+VKFSDVPINPNV EFHFLLSFAID+D+S    TNG FNVFWD+ NL  
Sbjct: 34  IFREYIGAEFNNVKFSDVPINPNV-EFHFLLSFAIDYDTSGSSPTNGNFNVFWDTDNLGA 93

Query: 89  SAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNLDGI 148
           S V+AIK DHSNV+VG+SLGGDSV +SG  YF PSS+ SWVSNA  SLT +I  +NLDGI
Sbjct: 94  SQVSAIKNDHSNVKVGLSLGGDSV-NSGSCYFNPSSVDSWVSNAVSSLTSIIQQYNLDGI 153

Query: 149 DIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGHLID 208
           DIDYEHF+SDPNTF+ECIG+LI+ LK KGVI FASIAPFDD +VQ+HYLALWK YG LID
Sbjct: 154 DIDYEHFKSDPNTFSECIGRLIKTLKDKGVIKFASIAPFDDDDVQSHYLALWKNYGQLID 213

Query: 209 YVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDSGGLLPKHGFFKACRRLR 268
           YVNFQFYAYD++TTV QFI +FK QSS Y  G++LAS ++D SGGL P++GFF AC RL+
Sbjct: 214 YVNFQFYAYDQSTTVSQFINYFKKQSSNYNGGKVLASFSTDGSGGLSPENGFFTACHRLK 273

Query: 269 TDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPN 304
           +++ L+GIF+WSADDS+  GFRYEK++QALL +P+
Sbjct: 274 SEQNLNGIFVWSADDSKKNGFRYEKQSQALLATPH 306

[Close]
BLAST of Carg12349 vs. TrEMBL
Match: tr|A0A2P5EF55|A0A2P5EF55_9ROSA (2S globulin OS=Trema orientalis OX=63057 GN=TorRG33x02_200750 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 9.9e-110
Identity = 196/275 (71.27%), Postives = 228/275 (82.91%), Query Frame = 0 

Query: 27  ATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYNL 86
           + +FREYIGAEFN+VKFSDVPINPNV +FHF+LSFAID+D+S    TNG FNVFWDS NL
Sbjct: 31  SNLFREYIGAEFNNVKFSDVPINPNV-DFHFILSFAIDYDASGTTPTNGKFNVFWDSENL 90

Query: 87  SPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNLD 146
           SPS V++IK  H NV+V +SLGGDSVGD GF YFKP S+ SWVSNA  +LT++I  +NLD
Sbjct: 91  SPSQVSSIKSSHPNVKVALSLGGDSVGD-GFAYFKPFSVDSWVSNAVSTLTRIIKEYNLD 150

Query: 147 GIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGHL 206
           GIDIDYEHF SDP TFAECIG+LI+ LK+  VISFASIAPFDD +VQ+HYLALWKRYG+L
Sbjct: 151 GIDIDYEHFSSDPQTFAECIGRLIKTLKRNKVISFASIAPFDDDQVQSHYLALWKRYGNL 210

Query: 207 IDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDSGGLLPKHGFFKACRR 266
           IDYVNFQFYAYD+ TTV QFI +FK QSS Y  G++LAS  SD SGGL P +GFF AC R
Sbjct: 211 IDYVNFQFYAYDQGTTVSQFIDYFKTQSSNYHGGKVLASFISDGSGGLSPDNGFFDACSR 270

Query: 267 LRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQS 302
           L++   LHGIFIWSADDS+  GFRYEK++QALL S
Sbjct: 271 LKSQGHLHGIFIWSADDSKKNGFRYEKRSQALLAS 303

The following BLAST results are available for this feature:
BLAST of Carg12349 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023524573.18.6e-15897.05chitinase 2-like [Cucurbita pepo subsp. pepo][more]
XP_022949055.11.1e-15798.56chitinase 2-like [Cucurbita moschata][more]
XP_004152902.14.0e-13182.01PREDICTED: chitinase 2-like [Cucumis sativus] >KGN65683.1 hypothetical protein C... [more]
XP_008457518.13.8e-12980.65PREDICTED: chitinase 2-like [Cucumis melo][more]
XP_022156744.12.5e-12881.59chitinase 2-like [Momordica charantia][more]
BLAST of Carg12349 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Carg12349 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SLP4|CHIT1_TULBA5.1e-10163.93Chitinase 1 OS=Tulipa bakeri OX=110455 PE=1 SV=1[more]
sp|Q7M443|CHIT2_TULBA1.6e-9964.13Chitinase 2 OS=Tulipa bakeri OX=110455 PE=1 SV=1[more]
sp|P39657|RUAP_SOYBN6.8e-2134.57RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1[more]
BLAST of Carg12349 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LV90|A0A0A0LV90_CUCSA2.7e-13182.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G496300 PE=3 SV=1[more]
tr|A0A1S3C5A3|A0A1S3C5A3_CUCME2.5e-12980.65chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103497192 PE=3 SV=1[more]
tr|M5VZB8|M5VZB8_PRUPE6.8e-11172.00Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G088400 PE=3 SV=1[more]
tr|A0A2P6QI35|A0A2P6QI35_ROSCH2.6e-11070.91Putative chitinase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0062101 PE=3 SV=1[more]
tr|A0A2P5EF55|A0A2P5EF55_9ROSA9.9e-11071.272S globulin OS=Trema orientalis OX=63057 GN=TorRG33x02_200750 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR001579Glyco_hydro_18_chit_AS
IPR001223Glyco_hydro18_cat
IPR0006772S_globulin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12349-RACarg12349-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0006772S globulinPRINTSPR005512SGLOBULINcoord: 27..40
score: 46.43
coord: 74..89
score: 27.6
coord: 91..109
score: 40.35
coord: 262..281
score: 37.08
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 89..224
e-value: 3.1E-14
score: 53.3
NoneNo IPR availableGENE3DG3DSA:3.20.20.80coord: 26..301
e-value: 6.0E-83
score: 280.5
NoneNo IPR availablePANTHERPTHR11177:SF253SUBFAMILY NOT NAMEDcoord: 7..300
NoneNo IPR availablePANTHERPTHR11177CHITINASEcoord: 7..300
NoneNo IPR availableCDDcd06544GH18_narbonincoord: 29..284
e-value: 1.55401E-120
score: 348.592
IPR001579Glycoside hydrolase, chitinase active sitePROSITEPS01095CHITINASE_18coord: 145..153
IPR017853Glycoside hydrolase superfamilySUPERFAMILYSSF51445(Trans)glycosidasescoord: 28..299

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12349Cla008270Watermelon (97103) v1carwmB0440
Carg12349Csa6G301040Cucumber (Chinese Long) v2carcuB0476
Carg12349Csa1G496300Cucumber (Chinese Long) v2carcuB0471
Carg12349MELO3C020685Melon (DHL92) v3.5.1carmeB0449
Carg12349ClCG03G001790Watermelon (Charleston Gray)carwcgB0436
Carg12349CSPI01G22640Wild cucumber (PI 183967)carcpiB0476
Carg12349CmaCh20G004490Cucurbita maxima (Rimu)carcmaB0614
Carg12349CmaCh01G005770Cucurbita maxima (Rimu)carcmaB0613
Carg12349CmoCh20G004860Cucurbita moschata (Rifu)carcmoB0597
Carg12349CmoCh01G006020Cucurbita moschata (Rifu)carcmoB0596
Carg12349Lsi10G013230Bottle gourd (USVL1VR-Ls)carlsiB401
Carg12349Lsi02G013820Bottle gourd (USVL1VR-Ls)carlsiB403
Carg12349Cp4.1LG02g13090Cucurbita pepo (Zucchini)carcpeB0622
Carg12349Cp4.1LG16g05690Cucurbita pepo (Zucchini)carcpeB0618
Carg12349CsGy1G022190Cucumber (Gy14) v2carcgybB0448
Carg12349CsGy6G016070Cucumber (Gy14) v2carcgybB0454
Carg12349MELO3C020685.2Melon (DHL92) v3.6.1carmedB0451
Carg12349CsaV3_1G033780Cucumber (Chinese Long) v3carcucB0472
Carg12349CsaV3_6G021940Cucumber (Chinese Long) v3carcucB0478
Carg12349Cla97C03G052780Watermelon (97103) v2carwmbB0467
Carg12349Bhi10G000507Wax gourdcarwgoB0530
Carg12349Bhi08G000572Wax gourdcarwgoB0535
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg12349Carg03277Silver-seed gourdcarcarB354
The following block(s) are covering this gene:
GeneOrganismBlock
Carg12349Wax gourdcarwgoB0529
Carg12349Silver-seed gourdcarcarB332
Carg12349Silver-seed gourdcarcarB333
Carg12349Silver-seed gourdcarcarB353
Carg12349Silver-seed gourdcarcarB447
Carg12349Cucumber (Gy14) v2carcgybB0452
Carg12349Cucumber (Gy14) v1carcgyB0512
Carg12349Cucurbita maxima (Rimu)carcmaB0610
Carg12349Cucurbita maxima (Rimu)carcmaB0615
Carg12349Cucurbita maxima (Rimu)carcmaB0616
Carg12349Cucurbita moschata (Rifu)carcmoB0594
Carg12349Cucurbita moschata (Rifu)carcmoB0598
Carg12349Cucurbita moschata (Rifu)carcmoB0599
Carg12349Cucurbita pepo (Zucchini)carcpeB0617
Carg12349Cucurbita pepo (Zucchini)carcpeB0619
Carg12349Cucurbita pepo (Zucchini)carcpeB0620
Carg12349Cucurbita pepo (Zucchini)carcpeB0624
Carg12349Wild cucumber (PI 183967)carcpiB0480
Carg12349Melon (DHL92) v3.5.1carmeB0446
Carg12349Bottle gourd (USVL1VR-Ls)carlsiB400
Carg12349Bottle gourd (USVL1VR-Ls)carlsiB405
Carg12349Melon (DHL92) v3.6.1carmedB0448
Carg12349Watermelon (Charleston Gray)carwcgB0433
Carg12349Watermelon (Charleston Gray)carwcgB0435
Carg12349Watermelon (97103) v1carwmB0441
Carg12349Watermelon (97103) v1carwmB0442
Carg12349Watermelon (97103) v1carwmB0444
Carg12349Watermelon (97103) v2carwmbB0464