Carg12229 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAACTCCGAGTCAGGAAAGTACCTAAGCGCTCCCTTTGGCATGCCAAGCCCTTGAAGTATGACATTACCCTTCATTCATTCTGGTATAACATAGTGTTTCAGATAAAGATATTGTAAGTGCTCCATTGAAGATATGAAGGAAATCCATGAAACTCTAAAATAACTGCACAGAACAAAATGACTCCTTTGCAGCTTCTCTTTGGAAAAAAAAATCTGCTTAAACCTCGGTGGGATCATGTCAAGGACCTTGAAAATGGACTGCAACTGTGGCAGTGTTCTTGTATATAGCAGACTGGTAAAACAAAACTATGATTATTTGTCAATATTGCAGTAGAAATCCTGATTTCCGTTCAGCAACCTCTGCATCTGGCTGTGAGACTTCAGGTTTCAAATCATACTGCCCTCTACCTCGTCGACGTAGGAAGCCATTTTCCAGGACCACAATGGAAGTTATTACTCGTTCTTTGGGTCATCATCAACCACATCCATCCAAAGCAATAAATGTTTTCACTCACTGGGTCCATCCAGACCAATTGAAGAGAGACCCACATTCAAGAACCGTATCTCTGAGATCGGAATCAGATACTCAGGCATATATGATCTCTAATATGGCACCACAACACGAAGCTTCCTATGAAGAACAGGGGCAATGTGGAATGGGCGATGAT ATGCAACTCCGAGTCAGGAAAGTACCTAAGCGCTCCCTTTGGCATGCCAAGCCCTTGAAGTATGACATTACCCTTCATTCATTCTGGTATAACATAGTGTTTCAGATAAAGATATTTAGAAATCCTGATTTCCGTTCAGCAACCTCTGCATCTGGCTGTGAGACTTCAGGTTTCAAATCATACTGCCCTCTACCTCGTCGACGTAGGAAGCCATTTTCCAGGACCACAATGGAAGTTATTACTCGTTCTTTGGGTCATCATCAACCACATCCATCCAAAGCAATAAATGTTTTCACTCACTGGGTCCATCCAGACCAATTGAAGAGAGACCCACATTCAAGAACCGTATCTCTGAGATCGGAATCAGATACTCAGGCATATATGATCTCTAATATGGCACCACAACACGAAGCTTCCTATGAAGAACAGGGGCAATGTGGAATGGGCGATGAT ATGCAACTCCGAGTCAGGAAAGTACCTAAGCGCTCCCTTTGGCATGCCAAGCCCTTGAAGTATGACATTACCCTTCATTCATTCTGGTATAACATAGTGTTTCAGATAAAGATATTTAGAAATCCTGATTTCCGTTCAGCAACCTCTGCATCTGGCTGTGAGACTTCAGGTTTCAAATCATACTGCCCTCTACCTCGTCGACGTAGGAAGCCATTTTCCAGGACCACAATGGAAGTTATTACTCGTTCTTTGGGTCATCATCAACCACATCCATCCAAAGCAATAAATGTTTTCACTCACTGGGTCCATCCAGACCAATTGAAGAGAGACCCACATTCAAGAACCGTATCTCTGAGATCGGAATCAGATACTCAGGCATATATGATCTCTAATATGGCACCACAACACGAAGCTTCCTATGAAGAACAGGGGCAATGTGGAATGGGCGATGAT MQLRVRKVPKRSLWHAKPLKYDITLHSFWYNIVFQIKIFRNPDFRSATSASGCETSGFKSYCPLPRRRRKPFSRTTMEVITRSLGHHQPHPSKAINVFTHWVHPDQLKRDPHSRTVSLRSESDTQAYMISNMAPQHEASYEEQGQCGMGDD
BLAST of Carg12229 vs. NCBI nr
Match: XP_004148727.1 (PREDICTED: probable glycosyltransferase At5g03795 [Cucumis sativus] >KGN65348.1 hypothetical protein Csa_1G364960 [Cucumis sativus]) HSP 1 Score: 64.3 bits (155), Expect = 4.0e-07 Identity = 31/41 (75.61%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Carg12229 vs. NCBI nr
Match: XP_008462761.1 (PREDICTED: probable glycosyltransferase At5g03795 [Cucumis melo]) HSP 1 Score: 64.3 bits (155), Expect = 4.0e-07 Identity = 31/41 (75.61%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Carg12229 vs. NCBI nr
Match: XP_022961026.1 (probable glycosyltransferase At5g03795 [Cucurbita moschata]) HSP 1 Score: 64.3 bits (155), Expect = 4.0e-07 Identity = 31/41 (75.61%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Carg12229 vs. NCBI nr
Match: XP_022987636.1 (probable glycosyltransferase At5g03795 [Cucurbita maxima]) HSP 1 Score: 64.3 bits (155), Expect = 4.0e-07 Identity = 31/41 (75.61%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Carg12229 vs. NCBI nr
Match: XP_023516188.1 (probable glycosyltransferase At5g03795 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 64.3 bits (155), Expect = 4.0e-07 Identity = 31/41 (75.61%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Carg12229 vs. TAIR10
Match: AT5G25820.1 (Exostosin family protein) HSP 1 Score: 55.5 bits (132), Expect = 3.4e-08 Identity = 26/41 (63.41%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of Carg12229 vs. TAIR10
Match: AT5G19670.1 (Exostosin family protein) HSP 1 Score: 51.2 bits (121), Expect = 6.4e-07 Identity = 24/40 (60.00%), Postives = 27/40 (67.50%), Query Frame = 0
BLAST of Carg12229 vs. TAIR10
Match: AT4G32790.1 (Exostosin family protein) HSP 1 Score: 49.3 bits (116), Expect = 2.4e-06 Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0
BLAST of Carg12229 vs. TrEMBL
Match: tr|A0A1S3CJA3|A0A1S3CJA3_CUCME (probable glycosyltransferase At5g03795 OS=Cucumis melo OX=3656 GN=LOC103501046 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.7e-07 Identity = 31/41 (75.61%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Carg12229 vs. TrEMBL
Match: tr|A0A0A0LU64|A0A0A0LU64_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G364960 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.7e-07 Identity = 31/41 (75.61%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Carg12229 vs. TrEMBL
Match: tr|A0A059CN85|A0A059CN85_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C01012 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.3e-06 Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Carg12229 vs. TrEMBL
Match: tr|A0A022QH56|A0A022QH56_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a002540mg PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.7e-06 Identity = 30/40 (75.00%), Postives = 31/40 (77.50%), Query Frame = 0
BLAST of Carg12229 vs. TrEMBL
Match: tr|F6HGM0|F6HGM0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g03370 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.9e-06 Identity = 29/40 (72.50%), Postives = 31/40 (77.50%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |