Carg12111 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12111
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	36.4 kDa proline-rich protein
Location	Cucurbita_argyrosperma_scaffold_054 : 14768 .. 15358 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCCTCAAAAATTTATTCCCTCTTCCTAGTTTGCATGCTTTTCCTCTCCACCGCCACTCCCATTTTGGGCTGCGGCGCCTGCGGCAACCCGCCACCCAAAAAGGGCAAACCCGGCTCCGGTTCCAAGTCCCCTAAAGGAGGCCCCATTGGCCTTCCACCCATCGACCTCCCTCCCGTCGTAAAACCGCCAATTTCCCTCCCCCCCATCGTCAAACCGCCTGTCGACCTCCCACCCATCCCTCCCGTTACCCTTCCTCCAGTCACCGTCCCTCCAGTTCTCACAAAGCCATCTCCGGCGTCGAAGCCCTGCCCCCCCTCGGGGAAAGAGACCTGCCCAATTGACACTCTGAAATTGGGCGCATGTGTGGATCTTCTAGGCGGGCTGGTGCACATTGGGCTAGGAGACCCTGCAGTGAATGAATGCTGCCCGGTACTCTCAGGGCTGGCTGAGGTGGAAGCCGCGGTTTGCCTTTGCACTACCCTTAAAATTAAGGCTCTTAGCCTTAACATCTATGTTCCCATTGCCCTTCAGCTCCTCATCAGCTGTGGGAAGACCCCTCCCCCTGGCTACACTTGCTCCCTTTAG

mRNA sequence

ATGGAGTCCTCAAAAATTTATTCCCTCTTCCTAGTTTGCATGCTTTTCCTCTCCACCGCCACTCCCATTTTGGGCTGCGGCGCCTGCGGCAACCCGCCACCCAAAAAGGGCAAACCCGGCTCCGGTTCCAAGTCCCCTAAAGGAGGCCCCATTGGCCTTCCACCCATCGACCTCCCTCCCGTCGTAAAACCGCCAATTTCCCTCCCCCCCATCGTCAAACCGCCTGTCGACCTCCCACCCATCCCTCCCGTTACCCTTCCTCCAGTCACCGTCCCTCCAGTTCTCACAAAGCCATCTCCGGCGTCGAAGCCCTGCCCCCCCTCGGGGAAAGAGACCTGCCCAATTGACACTCTGAAATTGGGCGCATGTGTGGATCTTCTAGGCGGGCTGGTGCACATTGGGCTAGGAGACCCTGCAGTGAATGAATGCTGCCCGGTACTCTCAGGGCTGGCTGAGGTGGAAGCCGCGGTTTGCCTTTGCACTACCCTTAAAATTAAGGCTCTTAGCCTTAACATCTATGTTCCCATTGCCCTTCAGCTCCTCATCAGCTGTGGGAAGACCCCTCCCCCTGGCTACACTTGCTCCCTTTAG

Coding sequence (CDS)

ATGGAGTCCTCAAAAATTTATTCCCTCTTCCTAGTTTGCATGCTTTTCCTCTCCACCGCCACTCCCATTTTGGGCTGCGGCGCCTGCGGCAACCCGCCACCCAAAAAGGGCAAACCCGGCTCCGGTTCCAAGTCCCCTAAAGGAGGCCCCATTGGCCTTCCACCCATCGACCTCCCTCCCGTCGTAAAACCGCCAATTTCCCTCCCCCCCATCGTCAAACCGCCTGTCGACCTCCCACCCATCCCTCCCGTTACCCTTCCTCCAGTCACCGTCCCTCCAGTTCTCACAAAGCCATCTCCGGCGTCGAAGCCCTGCCCCCCCTCGGGGAAAGAGACCTGCCCAATTGACACTCTGAAATTGGGCGCATGTGTGGATCTTCTAGGCGGGCTGGTGCACATTGGGCTAGGAGACCCTGCAGTGAATGAATGCTGCCCGGTACTCTCAGGGCTGGCTGAGGTGGAAGCCGCGGTTTGCCTTTGCACTACCCTTAAAATTAAGGCTCTTAGCCTTAACATCTATGTTCCCATTGCCCTTCAGCTCCTCATCAGCTGTGGGAAGACCCCTCCCCCTGGCTACACTTGCTCCCTTTAG

Protein sequence

MESSKIYSLFLVCMLFLSTATPILGCGACGNPPPKKGKPGSGSKSPKGGPIGLPPIDLPPVVKPPISLPPIVKPPVDLPPIPPVTLPPVTVPPVLTKPSPASKPCPPSGKETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSLNIYVPIALQLLISCGKTPPPGYTCSL

Homology

[Close]

BLAST of Carg12111 vs. NCBI nr
Match: XP_023529211.1 (36.4 kDa proline-rich protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.6 bits (719), Expect = 2.1e-72
Identity = 194/206 (94.17%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 1   MESSKIYSLFLVCMLFLSTATPILGCGACGNPPPKKGKPGSGSKSPKGGPIGLP------ 60
           MESSKIYSLFL+CMLFLSTATPILGCGACGNPPPKKGKPGSGSKSPKGGPIGLP      
Sbjct: 1   MESSKIYSLFLLCMLFLSTATPILGCGACGNPPPKKGKPGSGSKSPKGGPIGLPPITLXX 60

Query: 61  ----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPASKPCPPSGK 120
               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PASKPCPPSGK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASKPCPPSGK 120

Query: 121 ETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSL 180
           ETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSL
Sbjct: 121 ETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSL 180

Query: 181 NIYVPIALQLLISCGKTPPPGYTCSL 197
           NIYVPIALQLLISCGKTPPPGYTCSL
Sbjct: 181 NIYVPIALQLLISCGKTPPPGYTCSL 206

[Close]

BLAST of Carg12111 vs. NCBI nr
Match: XP_022933855.1 (36.4 kDa proline-rich protein-like [Cucurbita moschata])

HSP 1 Score: 281.2 bits (718), Expect = 2.7e-72
Identity = 194/206 (94.17%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MESSKIYSLFLVCMLFLSTATPILGCGACGNPPPKKGKPGSGSKSPKGGPIGLP------ 60
           MESSKIYSLFLVCMLFLSTATPI GCGACGNPPPKKGKPGSGSKSPKGGPIGLP      
Sbjct: 1   MESSKIYSLFLVCMLFLSTATPIFGCGACGNPPPKKGKPGSGSKSPKGGPIGLPPITLXX 60

Query: 61  ----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPASKPCPPSGK 120
               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PASKPCPPSGK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASKPCPPSGK 120

Query: 121 ETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSL 180
           ETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSL
Sbjct: 121 ETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSL 180

Query: 181 NIYVPIALQLLISCGKTPPPGYTCSL 197
           NIYVPIALQLLISCGKTPPPGYTCSL
Sbjct: 181 NIYVPIALQLLISCGKTPPPGYTCSL 206

[Close]

BLAST of Carg12111 vs. NCBI nr
Match: XP_022966511.1 (36.4 kDa proline-rich protein-like [Cucurbita maxima])

HSP 1 Score: 276.6 bits (706), Expect = 6.7e-71
Identity = 192/206 (93.20%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MESSKIYSLFLVCMLFLSTATPILGCGACGNPPPKKGKPGSGSKSPKGGPIGLP------ 60
           MESSKIYSLFL+CMLFLSTATPI GCGACGNPPPKK KPGSGSKSPKGGPIGLP      
Sbjct: 1   MESSKIYSLFLLCMLFLSTATPIFGCGACGNPPPKKVKPGSGSKSPKGGPIGLPPISLXX 60

Query: 61  ----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPASKPCPPSGK 120
               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PASKPCPPSGK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASKPCPPSGK 120

Query: 121 ETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSL 180
           ETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSL
Sbjct: 121 ETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSL 180

Query: 181 NIYVPIALQLLISCGKTPPPGYTCSL 197
           NIYVPIALQLLISCGKTPPPGYTCSL
Sbjct: 181 NIYVPIALQLLISCGKTPPPGYTCSL 206

[Close]

BLAST of Carg12111 vs. NCBI nr
Match: XP_004150208.2 (PREDICTED: 36.4 kDa proline-rich protein [Cucumis sativus] >KGN65120.1 hypothetical protein Csa_1G228960 [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 5.0e-58
Identity = 167/205 (81.46%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 1   MESSKIYSLFLVCMLFLSTATPILGCGACGNPPPKKGKPGSGSKSPKGGPIGLP------ 60
           ME SKIYSLFL+CMLF+S+A+PILGCG+C   PP+K KPGSGSKSPK GPI LP      
Sbjct: 1   MEPSKIYSLFLICMLFISSASPILGCGSCSGKPPRKTKPGSGSKSPK-GPITLPPIPIKX 60

Query: 61  --XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP-ASKPCPPSGKE 120
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SP  + PCPPSGKE
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPSPGVNTPCPPSGKE 120

Query: 121 TCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSLN 180
           TCPIDTLKLG CV+LLGGLVHIG+GDPA N CCP++SGLAE+EAAVCLCTTLKIKAL LN
Sbjct: 121 TCPIDTLKLGGCVNLLGGLVHIGIGDPAANACCPIISGLAELEAAVCLCTTLKIKALDLN 180

Query: 181 IYVPIALQLLISCGKTPPPGYTCSL 197
           IYVPIALQLLI+CGKTPPPGYTCSL
Sbjct: 181 IYVPIALQLLITCGKTPPPGYTCSL 204

[Close]

BLAST of Carg12111 vs. NCBI nr
Match: XP_008443949.1 (PREDICTED: 36.4 kDa proline-rich protein [Cucumis melo])

HSP 1 Score: 233.0 bits (593), Expect = 8.5e-58
Identity = 168/216 (77.78%), Postives = 180/216 (83.33%), Query Frame = 0


Query: 1   MESSKIYSLFLVCMLFLSTATPILGCGACGNPPPKKGKPGSGSKSPKGGPIGLP------ 60
           ME SKIYSLFL+CMLF+S+A+PILGCG+C   PP+K KPGSGSKSPK GPI LP      
Sbjct: 1   MEPSKIYSLFLICMLFISSASPILGCGSCSGKPPRKTKPGSGSKSPK-GPITLPPIPIKX 60

Query: 61  -------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP- 120
                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    SP 
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGNPSPG 120

Query: 121 ASKPCPPSGKETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLC 180
           A KPCPPSGKETCPIDTLKLG CVDLLGGLVHIG+GDPA N CCP++SGLAE+EAAVCLC
Sbjct: 121 AKKPCPPSGKETCPIDTLKLGGCVDLLGGLVHIGIGDPAANACCPIISGLAELEAAVCLC 180

Query: 181 TTLKIKALSLNIYVPIALQLLISCGKTPPPGYTCSL 197
           TTLKIKAL+L IYVPIALQLLI+CGKTPPPGYTCSL
Sbjct: 181 TTLKIKALNLKIYVPIALQLLITCGKTPPPGYTCSL 215

[Close]

BLAST of Carg12111 vs. TAIR10
Match: AT2G10940.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 156.4 bits (394), Expect = 1.8e-38
Identity = 71/85 (83.53%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 112 TCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSLN 171
           TCPIDTLKLGACVDLLGGLV IGLGDPAVN+CCP+L GL EVEAA CLCTTLK+KAL LN
Sbjct: 207 TCPIDTLKLGACVDLLGGLVKIGLGDPAVNKCCPLLKGLVEVEAAACLCTTLKLKALDLN 266

Query: 172 IYVPIALQLLISCGKTPPPGYTCSL 197
           +YVP+ALQLL++CGK PPPGYTCS+
Sbjct: 267 LYVPVALQLLLTCGKNPPPGYTCSI 291

[Close]

BLAST of Carg12111 vs. TAIR10
Match: AT1G62500.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-30
Identity = 57/83 (68.67%), Postives = 71/83 (85.54%), Query Frame = 0


Query: 112 TCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSLN 171
           TCPI+ LKLGACVD+LGGL+HIGLG+P  N CCPVL GL E+EAAVCLCTT+++K L+LN
Sbjct: 211 TCPINALKLGACVDVLGGLIHIGLGNPVENVCCPVLQGLLELEAAVCLCTTIRLKLLNLN 270

Query: 172 IYVPIALQLLISCGKTPPPGYTC 195
           I++P+ALQ LI+CG  PP G+ C
Sbjct: 271 IFIPLALQALITCGINPPSGFVC 293

[Close]

BLAST of Carg12111 vs. TAIR10
Match: AT3G22142.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 127.5 bits (319), Expect = 9.1e-30
Identity = 54/83 (65.06%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 112  TCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSLN 171
            TCPIDTLKLG+CVDLLGGLVHIG+G  A  +CCPV+ GL +++AAVCLCTT+K K L+++
Sbjct: 1396 TCPIDTLKLGSCVDLLGGLVHIGIGKSAKEKCCPVVEGLVDLDAAVCLCTTIKAKLLNID 1455

Query: 172  IYVPIALQLLISCGKTPPPGYTC 195
            + +PIAL++L++CGK PPPG+ C
Sbjct: 1456 VILPIALEVLLNCGKNPPPGFKC 1478

[Close]

BLAST of Carg12111 vs. TAIR10
Match: AT3G22120.1 (cell wall-plasma membrane linker protein)

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27
Identity = 55/83 (66.27%), Postives = 70/83 (84.34%), Query Frame = 0


Query: 113 CPIDTLKLGACVDLLGGLVHIGLG-DPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSLN 172
           CPIDTLKLGACVD+LGGL+HIGLG   A  ECCPVL GL +++AAVCLCTT+K+K L+++
Sbjct: 250 CPIDTLKLGACVDVLGGLIHIGLGKSHAKAECCPVLGGLLDLDAAVCLCTTIKLKLLNID 309

Query: 173 IYVPIALQLLISCGKTPPPGYTC 195
           + +PIAL+LL+ CGKTPP  + C
Sbjct: 310 LVLPIALELLLDCGKTPPSDFKC 332

[Close]

BLAST of Carg12111 vs. TAIR10
Match: AT4G15160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-25
Identity = 52/85 (61.18%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 112 TCPIDTLKLGACVDLLGGLVHIGLGDP-AVNECCPVLSGLAEVEAAVCLCTTLKIKALSL 171
           TCPID LKLGACVD+LGGL+HIGLG   A  +CCP+L  L  ++AAVCLCTT++ K L++
Sbjct: 180 TCPIDALKLGACVDVLGGLIHIGLGKSYAKAKCCPLLDDLVGLDAAVCLCTTIRAKLLNI 239

Query: 172 NIYVPIALQLLISCGKTPPP-GYTC 195
           ++ +PIAL++L+ CGKTPPP G+ C
Sbjct: 240 DLIIPIALEVLVDCGKTPPPRGFKC 264

[Close]

BLAST of Carg12111 vs. Swiss-Prot
Match: sp|Q00451|PRF1_SOLLC (36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-22
Identity = 48/80 (60.00%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 116 DTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSLNIYVP 175
           D LKLGACVD+LGGL+HIG+G  A   CCP+L GL +++AA+CLCTT+++K L++NI +P
Sbjct: 264 DALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLNINIILP 323

Query: 176 IALQLLI-SCGKTPPPGYTC 195
           IALQ+LI  CGK PP  + C
Sbjct: 324 IALQVLIDDCGKYPPKDFKC 343

[Close]

BLAST of Carg12111 vs. Swiss-Prot
Match: sp|Q9SU35|ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-17
Identity = 40/91 (43.96%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 106 PPSGKETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKI 165
           P S   +CPID LKLG C ++L  L++I LG P+  +CC ++ GL +V+AA+CLCT L+ 
Sbjct: 71  PGSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDAAICLCTALRA 130

Query: 166 KALSLNIYVPIALQLLIS-CGKTPPPGYTCS 196
             L +N+ VPI+L +L++ C +  P G+ C+
Sbjct: 131 NVLGINLNVPISLSVLLNVCNRKLPSGFQCA 161

[Close]

BLAST of Carg12111 vs. Swiss-Prot
Match: sp|Q9SU34|ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-17
Identity = 39/98 (39.80%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 99  SPASKPCPPSGKETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVC 158
           +P   P  P     CPID L+LG C ++L GL+++ LG P+   CC ++ GL +++AAVC
Sbjct: 85  TPVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVC 144

Query: 159 LCTTLKIKALSLNIYVPIALQLLIS-CGKTPPPGYTCS 196
           LCT L+   L +N+ VPI+L +L++ C +  P  + C+
Sbjct: 145 LCTALRANVLGINLNVPISLSVLLNVCNRRLPSNFQCA 182

[Close]

BLAST of Carg12111 vs. Swiss-Prot
Match: sp|Q9SU33|ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 37/93 (39.78%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 104 PCPPSGKETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTL 163
           P  P     CPID L+LG C ++L GL+++ LG P+   CC ++ GL +++AA+CLCT L
Sbjct: 85  PRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTAL 144

Query: 164 KIKALSLNIYVPIALQLLIS-CGKTPPPGYTCS 196
           +   L +N+ VPI+L +L++ C +  P  + C+
Sbjct: 145 RANVLGINLNVPISLSVLLNVCNRRLPSDFQCA 177

[Close]

BLAST of Carg12111 vs. Swiss-Prot
Match: sp|Q39176|ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.2e-16
Identity = 36/84 (42.86%), Postives = 58/84 (69.05%), Query Frame = 0


Query: 113 CPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSLNI 172
           CPID L+LG C ++L  L++I LG P+   CC ++ GL +++AA+CLCT L+   L +N+
Sbjct: 85  CPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINL 144

Query: 173 YVPIALQLLIS-CGKTPPPGYTCS 196
            VPI+L +L++ C +  P G+ C+
Sbjct: 145 NVPISLSVLLNVCNRKVPSGFQCA 168

[Close]

BLAST of Carg12111 vs. TrEMBL
Match: tr|A0A0A0LT87|A0A0A0LT87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G228960 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.3e-58
Identity = 167/205 (81.46%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 1   MESSKIYSLFLVCMLFLSTATPILGCGACGNPPPKKGKPGSGSKSPKGGPIGLP------ 60
           ME SKIYSLFL+CMLF+S+A+PILGCG+C   PP+K KPGSGSKSPK GPI LP      
Sbjct: 1   MEPSKIYSLFLICMLFISSASPILGCGSCSGKPPRKTKPGSGSKSPK-GPITLPPIPIKX 60

Query: 61  --XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP-ASKPCPPSGKE 120
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SP  + PCPPSGKE
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPSPGVNTPCPPSGKE 120

Query: 121 TCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSLN 180
           TCPIDTLKLG CV+LLGGLVHIG+GDPA N CCP++SGLAE+EAAVCLCTTLKIKAL LN
Sbjct: 121 TCPIDTLKLGGCVNLLGGLVHIGIGDPAANACCPIISGLAELEAAVCLCTTLKIKALDLN 180

Query: 181 IYVPIALQLLISCGKTPPPGYTCSL 197
           IYVPIALQLLI+CGKTPPPGYTCSL
Sbjct: 181 IYVPIALQLLITCGKTPPPGYTCSL 204

[Close]

BLAST of Carg12111 vs. TrEMBL
Match: tr|A0A1S3B8S4|A0A1S3B8S4_CUCME (36.4 kDa proline-rich protein OS=Cucumis melo OX=3656 GN=6H01 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.6e-58
Identity = 168/216 (77.78%), Postives = 180/216 (83.33%), Query Frame = 0


Query: 1   MESSKIYSLFLVCMLFLSTATPILGCGACGNPPPKKGKPGSGSKSPKGGPIGLP------ 60
           ME SKIYSLFL+CMLF+S+A+PILGCG+C   PP+K KPGSGSKSPK GPI LP      
Sbjct: 1   MEPSKIYSLFLICMLFISSASPILGCGSCSGKPPRKTKPGSGSKSPK-GPITLPPIPIKX 60

Query: 61  -------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP- 120
                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    SP 
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGNPSPG 120

Query: 121 ASKPCPPSGKETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLC 180
           A KPCPPSGKETCPIDTLKLG CVDLLGGLVHIG+GDPA N CCP++SGLAE+EAAVCLC
Sbjct: 121 AKKPCPPSGKETCPIDTLKLGGCVDLLGGLVHIGIGDPAANACCPIISGLAELEAAVCLC 180

Query: 181 TTLKIKALSLNIYVPIALQLLISCGKTPPPGYTCSL 197
           TTLKIKAL+L IYVPIALQLLI+CGKTPPPGYTCSL
Sbjct: 181 TTLKIKALNLKIYVPIALQLLITCGKTPPPGYTCSL 215

[Close]

BLAST of Carg12111 vs. TrEMBL
Match: tr|Q8VWX9|Q8VWX9_CUCSA (Extensin-like protein (Fragment) OS=Cucumis sativus OX=3659 GN=EXTL PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.2e-57
Identity = 167/216 (77.31%), Postives = 180/216 (83.33%), Query Frame = 0


Query: 1   MESSKIYSLFLVCMLFLSTATPILGCGACGNPPPKKGKPGSGSKSPKGGPIGLP------ 60
           ME SKIYSLFL+CMLF+S+A+PILGCG+C   PP+K KPGSGSKSPK GPI LP      
Sbjct: 5   MEPSKIYSLFLICMLFISSASPILGCGSCSGKPPRKTKPGSGSKSPK-GPITLPPIPIKX 64

Query: 61  -------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP- 120
                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SP 
Sbjct: 65  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPSPG 124

Query: 121 ASKPCPPSGKETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLC 180
            + PCPPSGKETCPIDTLKLG CV+LLGGLVHIG+GDPA N CCP++SGLAE+EAAVCLC
Sbjct: 125 VNTPCPPSGKETCPIDTLKLGGCVNLLGGLVHIGIGDPAANACCPIISGLAELEAAVCLC 184

Query: 181 TTLKIKALSLNIYVPIALQLLISCGKTPPPGYTCSL 197
           TTLKIKAL LNIYVPIALQLLI+CGKTPPPGYTCSL
Sbjct: 185 TTLKIKALDLNIYVPIALQLLITCGKTPPPGYTCSL 219

[Close]

BLAST of Carg12111 vs. TrEMBL
Match: tr|A0A1U8QBL8|A0A1U8QBL8_NELNU (36.4 kDa proline-rich protein OS=Nelumbo nucifera OX=4432 GN=LOC104586134 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.3e-42
Identity = 143/200 (71.50%), Postives = 160/200 (80.00%), Query Frame = 0


Query: 1   MESSKIYSLFLVCMLFLSTATPILGCGACGNPPPK----KGKPGSGSKSPKGGPIGLPXX 60
           M+SSKI +L ++CMLF+S+ATPILGCG C  PPPK                       XX
Sbjct: 1   MDSSKISALLIICMLFISSATPILGCGYCSKPPPKHKXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPASKPCPPSGKETCPID 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PA KP      ETCPID
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAKKP------ETCPID 120

Query: 121 TLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCTTLKIKALSLNIYVPI 180
           TLKLGACVDLLGGLVHIGLGDP VN+CCP+L GL E+EAAVCLCTTLK+K L++NIY+P+
Sbjct: 121 TLKLGACVDLLGGLVHIGLGDPVVNQCCPLLEGLVELEAAVCLCTTLKVKLLNINIYLPL 180

Query: 181 ALQLLISCGKTPPPGYTCSL 197
           ALQLL++CGKTPPPGYTC+L
Sbjct: 181 ALQLLVTCGKTPPPGYTCTL 194

[Close]

BLAST of Carg12111 vs. TrEMBL
Match: tr|A0A2R6QRX9|A0A2R6QRX9_ACTCH (Hydrophobic seed protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc14490 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.8e-41
Identity = 150/215 (69.77%), Postives = 162/215 (75.35%), Query Frame = 0


Query: 1   MESSKIYSLFLVCMLFLSTATPILGCGACGNPPPKKGKPGSGSKSPKGGPI--------- 60
           MESSK  +L  + MLF+S+ATPILGCG+CG  PP K KP    K PKG  +         
Sbjct: 1   MESSKFNALLFISMLFISSATPILGCGSCGK-PPSKHKP----KGPKGPVVXXXXXXXXX 60

Query: 61  ----------GLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPA 120
                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 SKPCPPSGKETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLCT 180
                     TCPIDTLKLGACVDLLGGLVHIGLGDPA NECCPVL+GL E+EAAVCLCT
Sbjct: 121 XXXXXXXAAATCPIDTLKLGACVDLLGGLVHIGLGDPAANECCPVLAGLVELEAAVCLCT 180

Query: 181 TLKIKALSLNIYVPIALQLLISCGKTPPPGYTCSL 197
           TLKIKAL+LNI+VPIALQLLI+CGKTPPPGYTCS+
Sbjct: 181 TLKIKALNLNIFVPIALQLLITCGKTPPPGYTCSV 210

The following BLAST results are available for this feature:

BLAST of Carg12111 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529211.1	2.1e-72	94.17	36.4 kDa proline-rich protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022933855.1	2.7e-72	94.17	36.4 kDa proline-rich protein-like [Cucurbita moschata]	[more]
XP_022966511.1	6.7e-71	93.20	36.4 kDa proline-rich protein-like [Cucurbita maxima]	[more]
XP_004150208.2	5.0e-58	81.46	PREDICTED: 36.4 kDa proline-rich protein [Cucumis sativus] >KGN65120.1 hypotheti...	[more]
XP_008443949.1	8.5e-58	77.78	PREDICTED: 36.4 kDa proline-rich protein [Cucumis melo]	[more]

BLAST of Carg12111 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G10940.1	1.8e-38	83.53	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G62500.1	1.1e-30	68.67	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22142.1	9.1e-30	65.06	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22120.1	1.1e-27	66.27	cell wall-plasma membrane linker protein	[more]
AT4G15160.1	2.3e-25	61.18	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

BLAST of Carg12111 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q00451\|PRF1_SOLLC	1.8e-22	60.00	36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV...	[more]
sp\|Q9SU35\|ERLL1_ARATH	1.0e-17	43.96	pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE...	[more]
sp\|Q9SU34\|ERLL2_ARATH	5.0e-17	39.80	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g124...	[more]
sp\|Q9SU33\|ERLL3_ARATH	1.9e-16	39.78	pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g125...	[more]
sp\|Q39176\|ERLI1_ARATH	4.2e-16	42.86	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV...	[more]

BLAST of Carg12111 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT87\|A0A0A0LT87_CUCSA	3.3e-58	81.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G228960 PE=4 SV=1	[more]
tr\|A0A1S3B8S4\|A0A1S3B8S4_CUCME	5.6e-58	77.78	36.4 kDa proline-rich protein OS=Cucumis melo OX=3656 GN=6H01 PE=4 SV=1	[more]
tr\|Q8VWX9\|Q8VWX9_CUCSA	6.2e-57	77.31	Extensin-like protein (Fragment) OS=Cucumis sativus OX=3659 GN=EXTL PE=2 SV=1	[more]
tr\|A0A1U8QBL8\|A0A1U8QBL8_NELNU	4.3e-42	71.50	36.4 kDa proline-rich protein OS=Nelumbo nucifera OX=4432 GN=LOC104586134 PE=4 S...	[more]
tr\|A0A2R6QRX9\|A0A2R6QRX9_ACTCH	4.8e-41	69.77	Hydrophobic seed protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR027923	Hydrophob_seed
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12111-RA	Carg12111-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 113..194 e-value: 2.5E-5 score: 33.7
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 109..196 e-value: 7.8E-21 score: 75.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..58
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 1..93 coord: 94..195
None	No IPR available	PANTHER	PTHR31731:SF54	SUBFAMILY NOT NAMED	coord: 1..93 coord: 94..195
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 112..195 e-value: 2.5E-27 score: 94.8
IPR027923	Hydrophobic seed protein	CDD	cd01958	HPS_like	coord: 112..194 e-value: 4.85491E-25 score: 93.5472
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 115..195

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12111	Cla012206	Watermelon (97103) v1	carwmB0042
Carg12111	Csa1G228960	Cucumber (Chinese Long) v2	carcuB0035
Carg12111	MELO3C010312	Melon (DHL92) v3.5.1	carmeB0035
Carg12111	ClCG06G011540	Watermelon (Charleston Gray)	carwcgB0043
Carg12111	CSPI01G16680	Wild cucumber (PI 183967)	carcpiB0037
Carg12111	Cucsa.036100	Cucumber (Gy14) v1	carcgyB0038
Carg12111	CmaCh11G005220	Cucurbita maxima (Rimu)	carcmaB0047
Carg12111	CmaCh10G005250	Cucurbita maxima (Rimu)	carcmaB0044
Carg12111	CmoCh11G005200	Cucurbita moschata (Rifu)	carcmoB0050
Carg12111	CmoCh10G005600	Cucurbita moschata (Rifu)	carcmoB0047
Carg12111	Lsi06G010020	Bottle gourd (USVL1VR-Ls)	carlsiB037
Carg12111	Cp4.1LG18g05180	Cucurbita pepo (Zucchini)	carcpeB0053
Carg12111	Cp4.1LG04g09280	Cucurbita pepo (Zucchini)	carcpeB0054
Carg12111	CsGy1G017050	Cucumber (Gy14) v2	carcgybB0040
Carg12111	MELO3C010312.2	Melon (DHL92) v3.6.1	carmedB0036
Carg12111	CsaV3_1G026750	Cucumber (Chinese Long) v3	carcucB0042
Carg12111	Cla97C06G120660	Watermelon (97103) v2	carwmbB0037
Carg12111	Bhi02G000785	Wax gourd	carwgoB0043

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12111	Carg09940	Silver-seed gourd	carcarB041

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12111	Wax gourd	carwgoB0042
Carg12111	Watermelon (Charleston Gray)	carwcgB0039
Carg12111	Watermelon (97103) v1	carwmB0037
Carg12111	Watermelon (97103) v2	carwmbB0033