Carg09940 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09940
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	36.4 kDa proline-rich protein
Location	Cucurbita_argyrosperma_scaffold_030 : 603435 .. 604214 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCTTCAAAAATCCACGCCCTGCTTCTAGTTTGCATGCTTTTCCTCTCCACCGCCGCCCCCATTTTCGGCTGCGGCTCCTGCGGCAAGCCACCTCCCAAGAAGGTCAAGCCCGGCTCCGGTTCCAAGCCCCCTAAGGGCCCCATTGTCCCACCCATCACCCTCCCTCCCGTCGTCAAACCCCCAATCAAAATCCCTCCCGTCCCCCTCCCTCCCGTGAAACCGCCCATCGACCTCCCACCCATCGTCAAACCACCAATCAAAATCCCTCCAGTCCCTCTCCCTCCCGTGAAACCGCCAATTGACCTCCCACCCGTCGTCAAACCACCAATCAAAATCCCCCCAGTTCCCCTCCCTCCTGTCAAACCGCCTATCGACCTCCCACCCGTCATCAAACCCCCAATCAAAATCCCTCCAGTCCCCATCCCTCCAGTCACCGTGCCGCCAGTGACGGCTCCTCCAGTCATCAAAAACCCATCTCCGGGAAAGAATCCTTGCCCGCCGCCGCCGGGGAAAGAGACCTGCCCAATTGACACTCTGAAACTGGGTGGGTGCGTGGATCTGTTGGGAGGGCTGGTGCACATTGGGGTAGGGGACCCTGCAGCCAATGCGTGCTGCCCTATAATTTCAGGGCTGGCTGAGTTGGAAGCGGCGGTTTGCCTTTGCACTACCCTTAAGATTAAGGCTCTTAACCTTAATATCTATGTCCCCATTGCCCTTCAGCTCCTTATCACTTGTGGGAAGACCCCTCCTCCTGGCTACACTTGCTCCCTTTAG

mRNA sequence

ATGGAGCCTTCAAAAATCCACGCCCTGCTTCTAGTTTGCATGCTTTTCCTCTCCACCGCCGCCCCCATTTTCGGCTGCGGCTCCTGCGGCAAGCCACCTCCCAAGAAGGTCAAGCCCGGCTCCGGTTCCAAGCCCCCTAAGGGCCCCATTGTCCCACCCATCACCCTCCCTCCCGTCGTCAAACCCCCAATCAAAATCCCTCCCGTCCCCCTCCCTCCCGTGAAACCGCCCATCGACCTCCCACCCATCGTCAAACCACCAATCAAAATCCCTCCAGTCCCTCTCCCTCCCGTGAAACCGCCAATTGACCTCCCACCCGTCGTCAAACCACCAATCAAAATCCCCCCAGTTCCCCTCCCTCCTGTCAAACCGCCTATCGACCTCCCACCCGTCATCAAACCCCCAATCAAAATCCCTCCAGTCCCCATCCCTCCAGTCACCGTGCCGCCAGTGACGGCTCCTCCAGTCATCAAAAACCCATCTCCGGGAAAGAATCCTTGCCCGCCGCCGCCGGGGAAAGAGACCTGCCCAATTGACACTCTGAAACTGGGTGGGTGCGTGGATCTGTTGGGAGGGCTGGTGCACATTGGGGTAGGGGACCCTGCAGCCAATGCGTGCTGCCCTATAATTTCAGGGCTGGCTGAGTTGGAAGCGGCGGTTTGCCTTTGCACTACCCTTAAGATTAAGGCTCTTAACCTTAATATCTATGTCCCCATTGCCCTTCAGCTCCTTATCACTTGTGGGAAGACCCCTCCTCCTGGCTACACTTGCTCCCTTTAG

Coding sequence (CDS)

ATGGAGCCTTCAAAAATCCACGCCCTGCTTCTAGTTTGCATGCTTTTCCTCTCCACCGCCGCCCCCATTTTCGGCTGCGGCTCCTGCGGCAAGCCACCTCCCAAGAAGGTCAAGCCCGGCTCCGGTTCCAAGCCCCCTAAGGGCCCCATTGTCCCACCCATCACCCTCCCTCCCGTCGTCAAACCCCCAATCAAAATCCCTCCCGTCCCCCTCCCTCCCGTGAAACCGCCCATCGACCTCCCACCCATCGTCAAACCACCAATCAAAATCCCTCCAGTCCCTCTCCCTCCCGTGAAACCGCCAATTGACCTCCCACCCGTCGTCAAACCACCAATCAAAATCCCCCCAGTTCCCCTCCCTCCTGTCAAACCGCCTATCGACCTCCCACCCGTCATCAAACCCCCAATCAAAATCCCTCCAGTCCCCATCCCTCCAGTCACCGTGCCGCCAGTGACGGCTCCTCCAGTCATCAAAAACCCATCTCCGGGAAAGAATCCTTGCCCGCCGCCGCCGGGGAAAGAGACCTGCCCAATTGACACTCTGAAACTGGGTGGGTGCGTGGATCTGTTGGGAGGGCTGGTGCACATTGGGGTAGGGGACCCTGCAGCCAATGCGTGCTGCCCTATAATTTCAGGGCTGGCTGAGTTGGAAGCGGCGGTTTGCCTTTGCACTACCCTTAAGATTAAGGCTCTTAACCTTAATATCTATGTCCCCATTGCCCTTCAGCTCCTTATCACTTGTGGGAAGACCCCTCCTCCTGGCTACACTTGCTCCCTTTAG

Protein sequence

MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKPPKGPIVPPITLPPVVKPPIKIPPVPLPPVKPPIDLPPIVKPPIKIPPVPLPPVKPPIDLPPVVKPPIKIPPVPLPPVKPPIDLPPVIKPPIKIPPVPIPPVTVPPVTAPPVIKNPSPGKNPCPPPPGKETCPIDTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIALQLLITCGKTPPPGYTCSL

Homology

[Close]

BLAST of Carg09940 vs. NCBI nr
Match: XP_023515483.1 (36.4 kDa proline-rich protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.9 bits (642), Expect = 2.3e-63
Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKPPKGPIVPPITXXXXX 60
           MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSK PKGPIVPPITXXXXX
Sbjct: 1   MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKSPKGPIVPPITXXXXX 60

Query: 61  XXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGKNPCPXXXXXXXXXIDT 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGKNPCPXXXXXXXXXIDT
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGKNPCPXXXXXXXXXIDT 180

Query: 181 LKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIA 240
           LKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIA
Sbjct: 181 LKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIA 240

Query: 241 LQLLITCGKTPPPGYTCSL 260
           LQLLITCGKTPPPGYTCSL
Sbjct: 241 LQLLITCGKTPPPGYTCSL 259

[Close]

BLAST of Carg09940 vs. NCBI nr
Match: XP_022961343.1 (36.4 kDa proline-rich protein-like [Cucurbita moschata])

HSP 1 Score: 247.7 bits (631), Expect = 4.4e-62
Identity = 234/259 (90.35%), Postives = 234/259 (90.35%), Query Frame = 0


Query: 1   MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKPPKGPIVPPITXXXXX 60
           MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSK PKGPIVPPITXXXXX
Sbjct: 1   MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKSPKGPIVPPITXXXXX 60

Query: 61  XXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXK                        XXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXK------------------------XXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGKNPCPXXXXXXXXXIDT 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGKNPCPXXXXXXXXXIDT
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGKNPCPXXXXXXXXXIDT 180

Query: 181 LKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIA 240
           LKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIA
Sbjct: 181 LKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIA 235

Query: 241 LQLLITCGKTPPPGYTCSL 260
           LQLLITCGKTPPPGYTCSL
Sbjct: 241 LQLLITCGKTPPPGYTCSL 235

[Close]

BLAST of Carg09940 vs. NCBI nr
Match: XP_022987840.1 (36.4 kDa proline-rich protein-like [Cucurbita maxima])

HSP 1 Score: 207.6 bits (527), Expect = 5.1e-50
Identity = 232/259 (89.58%), Postives = 233/259 (89.96%), Query Frame = 0


Query: 1   MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKPPKGPIVPPITXXXXX 60
           MEPSKIHA+LLVCMLFLSTAAPIFGCGSCGKPPPKKVK                 XXXXX
Sbjct: 1   MEPSKIHAVLLVCMLFLSTAAPIFGCGSCGKPPPKKVK----XXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGKNPCPXXXXXXXXXIDT 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGKNPCP         IDT
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGKNPCPTPPGKETCPIDT 180

Query: 181 LKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIA 240
           LKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIA
Sbjct: 181 LKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIA 240

Query: 241 LQLLITCGKTPPPGYTCSL 260
           LQLLITCGKTPPPGYTCSL
Sbjct: 241 LQLLITCGKTPPPGYTCSL 255

[Close]

BLAST of Carg09940 vs. NCBI nr
Match: XP_008443949.1 (PREDICTED: 36.4 kDa proline-rich protein [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-48
Identity = 180/261 (68.97%), Postives = 189/261 (72.41%), Query Frame = 0


Query: 1   MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKPPKGPI-VPPITXXXX 60
           MEPSKI++L L+CMLF+S+A+PI GCGSC   PP+K KPGSGSK PKGPI +PPI     
Sbjct: 1   MEPSKIYSLFLICMLFISSASPILGCGSCSGKPPRKTKPGSGSKSPKGPITLPPI----- 60

Query: 61  XXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
                                                      XXXXXXXXXXXXXXXXX
Sbjct: 61  ----------------------------------------PIKXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPG-KNPCPXXXXXXXXXI 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    SPG K PCP         I
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGNPSPGAKKPCP-PSGKETCPI 180

Query: 181 DTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVP 240
           DTLKLGGCVDLLGGLVHIG+GDPAANACCPIISGLAELEAAVCLCTTLKIKALNL IYVP
Sbjct: 181 DTLKLGGCVDLLGGLVHIGIGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLKIYVP 215

Query: 241 IALQLLITCGKTPPPGYTCSL 260
           IALQLLITCGKTPPPGYTCSL
Sbjct: 241 IALQLLITCGKTPPPGYTCSL 215

[Close]

BLAST of Carg09940 vs. NCBI nr
Match: AAL35979.1 (extensin-like protein, partial [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47
Identity = 180/261 (68.97%), Postives = 191/261 (73.18%), Query Frame = 0


Query: 1   MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKPPKGPI-VPPITXXXX 60
           MEPSKI++L L+CMLF+S+A+PI GCGSC   PP+K KPGSGSK PKGPI +PPI     
Sbjct: 5   MEPSKIYSLFLICMLFISSASPILGCGSCSGKPPRKTKPGSGSKSPKGPITLPPI----- 64

Query: 61  XXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
                                                      XXXXXXXXXXXXXXXXX
Sbjct: 65  ----------------------------------------PIKXXXXXXXXXXXXXXXXX 124

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGKN-PCPXXXXXXXXXI 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SPG N PCP         I
Sbjct: 125 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPSPGVNTPCP-PSGKETCPI 184

Query: 181 DTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVP 240
           DTLKLGGCV+LLGGLVHIG+GDPAANACCPIISGLAELEAAVCLCTTLKIKAL+LNIYVP
Sbjct: 185 DTLKLGGCVNLLGGLVHIGIGDPAANACCPIISGLAELEAAVCLCTTLKIKALDLNIYVP 219

Query: 241 IALQLLITCGKTPPPGYTCSL 260
           IALQLLITCGKTPPPGYTCSL
Sbjct: 245 IALQLLITCGKTPPPGYTCSL 219

[Close]

BLAST of Carg09940 vs. TAIR10
Match: AT2G10940.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-34
Identity = 64/82 (78.05%), Postives = 74/82 (90.24%), Query Frame = 0


Query: 178 IDTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYV 237
           IDTLKLG CVDLLGGLV IG+GDPA N CCP++ GL E+EAA CLCTTLK+KAL+LN+YV
Sbjct: 210 IDTLKLGACVDLLGGLVKIGLGDPAVNKCCPLLKGLVEVEAAACLCTTLKLKALDLNLYV 269

Query: 238 PIALQLLITCGKTPPPGYTCSL 260
           P+ALQLL+TCGK PPPGYTCS+
Sbjct: 270 PVALQLLLTCGKNPPPGYTCSI 291

[Close]

BLAST of Carg09940 vs. TAIR10
Match: AT1G62500.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.7e-28
Identity = 53/80 (66.25%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 178 IDTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYV 237
           I+ LKLG CVD+LGGL+HIG+G+P  N CCP++ GL ELEAAVCLCTT+++K LNLNI++
Sbjct: 214 INALKLGACVDVLGGLIHIGLGNPVENVCCPVLQGLLELEAAVCLCTTIRLKLLNLNIFI 273

Query: 238 PIALQLLITCGKTPPPGYTC 258
           P+ALQ LITCG  PP G+ C
Sbjct: 274 PLALQALITCGINPPSGFVC 293

[Close]

BLAST of Carg09940 vs. TAIR10
Match: AT3G22142.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 121.3 bits (303), Expect = 8.6e-28
Identity = 52/80 (65.00%), Postives = 66/80 (82.50%), Query Frame = 0


Query: 178  IDTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYV 237
            IDTLKLG CVDLLGGLVHIG+G  A   CCP++ GL +L+AAVCLCTT+K K LN+++ +
Sbjct: 1399 IDTLKLGSCVDLLGGLVHIGIGKSAKEKCCPVVEGLVDLDAAVCLCTTIKAKLLNIDVIL 1458

Query: 238  PIALQLLITCGKTPPPGYTC 258
            PIAL++L+ CGK PPPG+ C
Sbjct: 1459 PIALEVLLNCGKNPPPGFKC 1478

[Close]

BLAST of Carg09940 vs. TAIR10
Match: AT3G22120.1 (cell wall-plasma membrane linker protein)

HSP 1 Score: 112.8 bits (281), Expect = 3.1e-25
Identity = 51/81 (62.96%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 178 IDTLKLGGCVDLLGGLVHIGVGDPAANA-CCPIISGLAELEAAVCLCTTLKIKALNLNIY 237
           IDTLKLG CVD+LGGL+HIG+G   A A CCP++ GL +L+AAVCLCTT+K+K LN+++ 
Sbjct: 252 IDTLKLGACVDVLGGLIHIGLGKSHAKAECCPVLGGLLDLDAAVCLCTTIKLKLLNIDLV 311

Query: 238 VPIALQLLITCGKTPPPGYTC 258
           +PIAL+LL+ CGKTPP  + C
Sbjct: 312 LPIALELLLDCGKTPPSDFKC 332

[Close]

BLAST of Carg09940 vs. TAIR10
Match: AT4G15160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 105.5 bits (262), Expect = 4.9e-23
Identity = 49/82 (59.76%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 178 IDTLKLGGCVDLLGGLVHIGVGDPAANA-CCPIISGLAELEAAVCLCTTLKIKALNLNIY 237
           ID LKLG CVD+LGGL+HIG+G   A A CCP++  L  L+AAVCLCTT++ K LN+++ 
Sbjct: 183 IDALKLGACVDVLGGLIHIGLGKSYAKAKCCPLLDDLVGLDAAVCLCTTIRAKLLNIDLI 242

Query: 238 VPIALQLLITCGKTPPP-GYTC 258
           +PIAL++L+ CGKTPPP G+ C
Sbjct: 243 IPIALEVLVDCGKTPPPRGFKC 264

[Close]

BLAST of Carg09940 vs. Swiss-Prot
Match: sp|Q00451|PRF1_SOLLC (36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-22
Identity = 48/80 (60.00%), Postives = 63/80 (78.75%), Query Frame = 0


Query: 179 DTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVP 238
           D LKLG CVD+LGGL+HIG+G  A   CCP++ GL +L+AA+CLCTT+++K LN+NI +P
Sbjct: 264 DALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLNINIILP 323

Query: 239 IALQLLI-TCGKTPPPGYTC 258
           IALQ+LI  CGK PP  + C
Sbjct: 324 IALQVLIDDCGKYPPKDFKC 343

[Close]

BLAST of Carg09940 vs. Swiss-Prot
Match: sp|Q39176|ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.0e-14
Identity = 36/82 (43.90%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 178 IDTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYV 237
           ID L+LG C ++L  L++I +G P+A  CC +I GL +L+AA+CLCT L+   L +N+ V
Sbjct: 87  IDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINLNV 146

Query: 238 PIALQLLI-TCGKTPPPGYTCS 259
           PI+L +L+  C +  P G+ C+
Sbjct: 147 PISLSVLLNVCNRKVPSGFQCA 168

[Close]

BLAST of Carg09940 vs. Swiss-Prot
Match: sp|Q9SU35|ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.8e-14
Identity = 40/101 (39.60%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 161 SPGK--NPCPXXXXXXXXXIDTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEA 220
           +PG   N CP         ID LKLG C ++L  L++I +G P++  CC +I GL +++A
Sbjct: 70  TPGSSGNSCP---------IDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDA 129

Query: 221 AVCLCTTLKIKALNLNIYVPIALQLLI-TCGKTPPPGYTCS 259
           A+CLCT L+   L +N+ VPI+L +L+  C +  P G+ C+
Sbjct: 130 AICLCTALRANVLGINLNVPISLSVLLNVCNRKLPSGFQCA 161

[Close]

BLAST of Carg09940 vs. Swiss-Prot
Match: sp|Q9SU33|ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.8e-14
Identity = 35/82 (42.68%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 178 IDTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYV 237
           ID L+LG C ++L GL+++ +G P+A  CC +I GL +L+AA+CLCT L+   L +N+ V
Sbjct: 96  IDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINLNV 155

Query: 238 PIALQLLI-TCGKTPPPGYTCS 259
           PI+L +L+  C +  P  + C+
Sbjct: 156 PISLSVLLNVCNRRLPSDFQCA 177

[Close]

BLAST of Carg09940 vs. Swiss-Prot
Match: sp|Q9SU34|ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-13
Identity = 35/82 (42.68%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 178 IDTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYV 237
           ID L+LG C ++L GL+++ +G P+   CC +I GL +L+AAVCLCT L+   L +N+ V
Sbjct: 101 IDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINLNV 160

Query: 238 PIALQLLI-TCGKTPPPGYTCS 259
           PI+L +L+  C +  P  + C+
Sbjct: 161 PISLSVLLNVCNRRLPSNFQCA 182

[Close]

BLAST of Carg09940 vs. TrEMBL
Match: tr|A0A1S3B8S4|A0A1S3B8S4_CUCME (36.4 kDa proline-rich protein OS=Cucumis melo OX=3656 GN=6H01 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.4e-48
Identity = 180/261 (68.97%), Postives = 189/261 (72.41%), Query Frame = 0


Query: 1   MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKPPKGPI-VPPITXXXX 60
           MEPSKI++L L+CMLF+S+A+PI GCGSC   PP+K KPGSGSK PKGPI +PPI     
Sbjct: 1   MEPSKIYSLFLICMLFISSASPILGCGSCSGKPPRKTKPGSGSKSPKGPITLPPI----- 60

Query: 61  XXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
                                                      XXXXXXXXXXXXXXXXX
Sbjct: 61  ----------------------------------------PIKXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPG-KNPCPXXXXXXXXXI 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    SPG K PCP         I
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGNPSPGAKKPCP-PSGKETCPI 180

Query: 181 DTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVP 240
           DTLKLGGCVDLLGGLVHIG+GDPAANACCPIISGLAELEAAVCLCTTLKIKALNL IYVP
Sbjct: 181 DTLKLGGCVDLLGGLVHIGIGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLKIYVP 215

Query: 241 IALQLLITCGKTPPPGYTCSL 260
           IALQLLITCGKTPPPGYTCSL
Sbjct: 241 IALQLLITCGKTPPPGYTCSL 215

[Close]

BLAST of Carg09940 vs. TrEMBL
Match: tr|A0A0A0LT87|A0A0A0LT87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G228960 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 9.1e-48
Identity = 169/261 (64.75%), Postives = 180/261 (68.97%), Query Frame = 0


Query: 1   MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKPPKGPI-VPPITXXXX 60
           MEPSKI++L L+CMLF+S+A+PI GCGSC   PP+K KPGSGSK PKGPI +PPI     
Sbjct: 1   MEPSKIYSLFLICMLFISSASPILGCGSCSGKPPRKTKPGSGSKSPKGPITLPPI----- 60

Query: 61  XXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
                                                                 XXXXXX
Sbjct: 61  ---------------------------------------------------PIKXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGKN-PCPXXXXXXXXXI 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SPG N PCP         I
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPSPGVNTPCP-PSGKETCPI 180

Query: 181 DTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVP 240
           DTLKLGGCV+LLGGLVHIG+GDPAANACCPIISGLAELEAAVCLCTTLKIKAL+LNIYVP
Sbjct: 181 DTLKLGGCVNLLGGLVHIGIGDPAANACCPIISGLAELEAAVCLCTTLKIKALDLNIYVP 204

Query: 241 IALQLLITCGKTPPPGYTCSL 260
           IALQLLITCGKTPPPGYTCSL
Sbjct: 241 IALQLLITCGKTPPPGYTCSL 204

[Close]

BLAST of Carg09940 vs. TrEMBL
Match: tr|Q8VWX9|Q8VWX9_CUCSA (Extensin-like protein (Fragment) OS=Cucumis sativus OX=3659 GN=EXTL PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 9.1e-48
Identity = 180/261 (68.97%), Postives = 191/261 (73.18%), Query Frame = 0


Query: 1   MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKPPKGPI-VPPITXXXX 60
           MEPSKI++L L+CMLF+S+A+PI GCGSC   PP+K KPGSGSK PKGPI +PPI     
Sbjct: 5   MEPSKIYSLFLICMLFISSASPILGCGSCSGKPPRKTKPGSGSKSPKGPITLPPI----- 64

Query: 61  XXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
                                                      XXXXXXXXXXXXXXXXX
Sbjct: 65  ----------------------------------------PIKXXXXXXXXXXXXXXXXX 124

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGKN-PCPXXXXXXXXXI 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SPG N PCP         I
Sbjct: 125 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPSPGVNTPCP-PSGKETCPI 184

Query: 181 DTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVP 240
           DTLKLGGCV+LLGGLVHIG+GDPAANACCPIISGLAELEAAVCLCTTLKIKAL+LNIYVP
Sbjct: 185 DTLKLGGCVNLLGGLVHIGIGDPAANACCPIISGLAELEAAVCLCTTLKIKALDLNIYVP 219

Query: 241 IALQLLITCGKTPPPGYTCSL 260
           IALQLLITCGKTPPPGYTCSL
Sbjct: 245 IALQLLITCGKTPPPGYTCSL 219

[Close]

BLAST of Carg09940 vs. TrEMBL
Match: tr|A0A2R6QRX9|A0A2R6QRX9_ACTCH (Hydrophobic seed protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc14490 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.4e-35
Identity = 181/259 (69.88%), Postives = 192/259 (74.13%), Query Frame = 0


Query: 1   MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKPPKGPIVPPITXXXXX 60
           ME SK +ALL + MLF+S+A PI GCGSCGKPP K  KP    K PKGP+V         
Sbjct: 1   MESSKFNALLFISMLFISSATPILGCGSCGKPPSKH-KP----KGPKGPVV--------- 60

Query: 61  XXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
                                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  --------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGKNPCPXXXXXXXXXIDT 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      CP         IDT
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAATCP---------IDT 180

Query: 181 LKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIA 240
           LKLG CVDLLGGLVHIG+GDPAAN CCP+++GL ELEAAVCLCTTLKIKALNLNI+VPIA
Sbjct: 181 LKLGACVDLLGGLVHIGLGDPAANECCPVLAGLVELEAAVCLCTTLKIKALNLNIFVPIA 210

Query: 241 LQLLITCGKTPPPGYTCSL 260
           LQLLITCGKTPPPGYTCS+
Sbjct: 241 LQLLITCGKTPPPGYTCSV 210

[Close]

BLAST of Carg09940 vs. TrEMBL
Match: tr|A0A2G9G233|A0A2G9G233_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28132 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.3e-35
Identity = 75/81 (92.59%), Postives = 78/81 (96.30%), Query Frame = 0


Query: 178 IDTLKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYV 237
           IDTLKLG CVDLLGGLVHIG+GDPAAN CCPIISGL ELEAAVCLCTTLKIKALNLNIYV
Sbjct: 112 IDTLKLGACVDLLGGLVHIGLGDPAANECCPIISGLVELEAAVCLCTTLKIKALNLNIYV 171

Query: 238 PIALQLLITCGKTPPPGYTCS 259
           P+ALQLL+TCGKTPPPGYTCS
Sbjct: 172 PLALQLLVTCGKTPPPGYTCS 192

The following BLAST results are available for this feature:

BLAST of Carg09940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515483.1	2.3e-63	99.61	36.4 kDa proline-rich protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022961343.1	4.4e-62	90.35	36.4 kDa proline-rich protein-like [Cucurbita moschata]	[more]
XP_022987840.1	5.1e-50	89.58	36.4 kDa proline-rich protein-like [Cucurbita maxima]	[more]
XP_008443949.1	3.6e-48	68.97	PREDICTED: 36.4 kDa proline-rich protein [Cucumis melo]	[more]
AAL35979.1	1.4e-47	68.97	extensin-like protein, partial [Cucumis sativus]	[more]

BLAST of Carg09940 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G10940.1	2.8e-34	78.05	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G62500.1	1.7e-28	66.25	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22142.1	8.6e-28	65.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22120.1	3.1e-25	62.96	cell wall-plasma membrane linker protein	[more]
AT4G15160.1	4.9e-23	59.76	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

BLAST of Carg09940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q00451\|PRF1_SOLLC	1.4e-22	60.00	36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV...	[more]
sp\|Q39176\|ERLI1_ARATH	3.0e-14	43.90	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV...	[more]
sp\|Q9SU35\|ERLL1_ARATH	6.8e-14	39.60	pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE...	[more]
sp\|Q9SU33\|ERLL3_ARATH	6.8e-14	42.68	pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g125...	[more]
sp\|Q9SU34\|ERLL2_ARATH	1.5e-13	42.68	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g124...	[more]

BLAST of Carg09940 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B8S4\|A0A1S3B8S4_CUCME	2.4e-48	68.97	36.4 kDa proline-rich protein OS=Cucumis melo OX=3656 GN=6H01 PE=4 SV=1	[more]
tr\|A0A0A0LT87\|A0A0A0LT87_CUCSA	9.1e-48	64.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G228960 PE=4 SV=1	[more]
tr\|Q8VWX9\|Q8VWX9_CUCSA	9.1e-48	68.97	Extensin-like protein (Fragment) OS=Cucumis sativus OX=3659 GN=EXTL PE=2 SV=1	[more]
tr\|A0A2R6QRX9\|A0A2R6QRX9_ACTCH	1.4e-35	69.88	Hydrophobic seed protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY...	[more]
tr\|A0A2G9G233\|A0A2G9G233_9LAMI	2.3e-35	92.59	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28132 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR027923	Hydrophob_seed
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09940-RA	Carg09940-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 109..134 score: 35.38 coord: 69..86 score: 44.44 coord: 28..49 score: 36.36 coord: 51..67 score: 34.12
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 172..259 e-value: 2.3E-20 score: 74.1
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 159..258 coord: 1..75
None	No IPR available	PANTHER	PTHR31731:SF54	SUBFAMILY NOT NAMED	coord: 159..258
None	No IPR available	PANTHER	PTHR31731:SF54	SUBFAMILY NOT NAMED	coord: 1..75
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 176..257 e-value: 1.3E-4 score: 31.3
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 175..258 e-value: 2.6E-27 score: 94.7
IPR027923	Hydrophobic seed protein	CDD	cd01958	HPS_like	coord: 175..257 e-value: 4.76362E-23 score: 89.31
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 178..258

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09940	Cla012206	Watermelon (97103) v1	carwmB0126
Carg09940	Csa1G228960	Cucumber (Chinese Long) v2	carcuB0137
Carg09940	MELO3C010312	Melon (DHL92) v3.5.1	carmeB0131
Carg09940	ClCG06G011540	Watermelon (Charleston Gray)	carwcgB0125
Carg09940	CSPI01G16680	Wild cucumber (PI 183967)	carcpiB0141
Carg09940	Cucsa.036100	Cucumber (Gy14) v1	carcgyB0149
Carg09940	CmaCh10G005250	Cucurbita maxima (Rimu)	carcmaB0166
Carg09940	CmaCh11G005220	Cucurbita maxima (Rimu)	carcmaB0169
Carg09940	CmoCh10G005600	Cucurbita moschata (Rifu)	carcmoB0172
Carg09940	Lsi06G010020	Bottle gourd (USVL1VR-Ls)	carlsiB115
Carg09940	Cp4.1LG18g05180	Cucurbita pepo (Zucchini)	carcpeB0185
Carg09940	CsGy1G017050	Cucumber (Gy14) v2	carcgybB0132
Carg09940	MELO3C010312.2	Melon (DHL92) v3.6.1	carmedB0135
Carg09940	CsaV3_1G026750	Cucumber (Chinese Long) v3	carcucB0142
Carg09940	Cla97C06G120660	Watermelon (97103) v2	carwmbB0133
Carg09940	Bhi02G000785	Wax gourd	carwgoB0165

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg09940	Carg12111	Silver-seed gourd	carcarB041

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09940	Silver-seed gourd	carcarB152
Carg09940	Silver-seed gourd	carcarB154
Carg09940	Cucumber (Gy14) v2	carcgybB0137
Carg09940	Cucumber (Gy14) v1	carcgyB0154
Carg09940	Cucurbita maxima (Rimu)	carcmaB0165
Carg09940	Cucurbita maxima (Rimu)	carcmaB0171
Carg09940	Cucurbita moschata (Rifu)	carcmoB0175
Carg09940	Cucurbita moschata (Rifu)	carcmoB0179
Carg09940	Cucurbita pepo (Zucchini)	carcpeB0181
Carg09940	Cucurbita pepo (Zucchini)	carcpeB0186
Carg09940	Wild cucumber (PI 183967)	carcpiB0138
Carg09940	Wild cucumber (PI 183967)	carcpiB0143
Carg09940	Cucumber (Chinese Long) v3	carcucB0147
Carg09940	Bottle gourd (USVL1VR-Ls)	carlsiB111
Carg09940	Melon (DHL92) v3.5.1	carmeB0133
Carg09940	Melon (DHL92) v3.6.1	carmedB0137
Carg09940	Watermelon (Charleston Gray)	carwcgB0124
Carg09940	Watermelon (97103) v1	carwmB0125
Carg09940	Watermelon (97103) v2	carwmbB0131
Carg09940	Watermelon (97103) v2	carwmbB0132
Carg09940	Watermelon (97103) v2	carwmbB0136