Carg12004 (gene) Silver-seed gourd

Overview
NameCarg12004
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUrease accessory protein UreF
LocationCucurbita_argyrosperma_scaffold_037 : 423872 .. 424558 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGACAAACAATTTCACTGGAGCCAGTGGCAACTGCTCGATTCTATCCTTCCTTCTGGTGGCTTTGCCCATTCGTTCGGTCTCGAGGCTGCAATTCAAGCTCGCATTGTCTCACAACCAGAAGATCTCAAAACGTTTGTGATCCATTTGTTAGACAACACTGGAAGTTTGCTTCTTCCTTTTGTGCATTCGACCACGCTATCACCTGATTTAGAAACTTGGGAGAATAATGACAGATTCTTGAATGCAATTTTGACAAATGAAGTTAGTCGAAAGGCGTCCGTTACGCAAGGATCGGCACTCATGAGAGTTGCAGCAATAGTATTTTCTGAAATCTCGTCTCTGAAAGCGATGAGAGAAACCACCACAGGGACCGGGGCTGTTTCCTTCCACCACGCTCCCATATTCGGGCTAATCTGCGGTCTACTAGGATGGGATAGCACGATGTCGCAGAGGGCGTATCTGTTTATTACCCTGAGAGACGTGATTTCTGCTGCAACAAGACTGAATTTAGTAGGACCTTTGGGTGCAGCTGTGTTGCAGCATCAGCTTGCGCTTGTTGCTGAAGACACATTGAAAAAATGGATGAACCGTCCTGTGGAAGAAGCTTGCCAAACGGTTCCTCTGTTAGAGACAGTACAGGGATGCCATACGTACCTGTTTTCTAGGCTGTTCTGTTCTTGA

mRNA sequence

ATGGATGACAAACAATTTCACTGGAGCCAGTGGCAACTGCTCGATTCTATCCTTCCTTCTGGTGGCTTTGCCCATTCGTTCGGTCTCGAGGCTGCAATTCAAGCTCGCATTGTCTCACAACCAGAAGATCTCAAAACGTTTGTGATCCATTTGTTAGACAACACTGGAAGTTTGCTTCTTCCTTTTGTGCATTCGACCACGCTATCACCTGATTTAGAAACTTGGGAGAATAATGACAGATTCTTGAATGCAATTTTGACAAATGAAGTTAGTCGAAAGGCGTCCGTTACGCAAGGATCGGCACTCATGAGAGTTGCAGCAATAGTATTTTCTGAAATCTCGTCTCTGAAAGCGATGAGAGAAACCACCACAGGGACCGGGGCTGTTTCCTTCCACCACGCTCCCATATTCGGGCTAATCTGCGGTCTACTAGGATGGGATAGCACGATGTCGCAGAGGGCGTATCTGTTTATTACCCTGAGAGACGTGATTTCTGCTGCAACAAGACTGAATTTAGTAGGACCTTTGGGTGCAGCTGTGTTGCAGCATCAGCTTGCGCTTGTTGCTGAAGACACATTGAAAAAATGGATGAACCGTCCTGTGGAAGAAGCTTGCCAAACGGTTCCTCTGTTAGAGACAGTACAGGGATGCCATACGTACCTGTTTTCTAGGCTGTTCTGTTCTTGA

Coding sequence (CDS)

ATGGATGACAAACAATTTCACTGGAGCCAGTGGCAACTGCTCGATTCTATCCTTCCTTCTGGTGGCTTTGCCCATTCGTTCGGTCTCGAGGCTGCAATTCAAGCTCGCATTGTCTCACAACCAGAAGATCTCAAAACGTTTGTGATCCATTTGTTAGACAACACTGGAAGTTTGCTTCTTCCTTTTGTGCATTCGACCACGCTATCACCTGATTTAGAAACTTGGGAGAATAATGACAGATTCTTGAATGCAATTTTGACAAATGAAGTTAGTCGAAAGGCGTCCGTTACGCAAGGATCGGCACTCATGAGAGTTGCAGCAATAGTATTTTCTGAAATCTCGTCTCTGAAAGCGATGAGAGAAACCACCACAGGGACCGGGGCTGTTTCCTTCCACCACGCTCCCATATTCGGGCTAATCTGCGGTCTACTAGGATGGGATAGCACGATGTCGCAGAGGGCGTATCTGTTTATTACCCTGAGAGACGTGATTTCTGCTGCAACAAGACTGAATTTAGTAGGACCTTTGGGTGCAGCTGTGTTGCAGCATCAGCTTGCGCTTGTTGCTGAAGACACATTGAAAAAATGGATGAACCGTCCTGTGGAAGAAGCTTGCCAAACGGTTCCTCTGTTAGAGACAGTACAGGGATGCCATACGTACCTGTTTTCTAGGCTGTTCTGTTCTTGA

Protein sequence

MDDKQFHWSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLLPFVHSTTLSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMRETTTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAVLQHQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS
Homology
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BLAST of Carg12004 vs. NCBI nr
Match: XP_022946416.1 (urease accessory protein F [Cucurbita moschata])

HSP 1 Score: 453.4 bits (1165), Expect = 4.7e-124
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0 

Query: 1   MDDKQFHWSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLL 60
           MDDKQFHWSQWQLLDSILP+GGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLL
Sbjct: 8   MDDKQFHWSQWQLLDSILPTGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLL 67

Query: 61  PFVHSTTLSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMR 120
           PFVHSTTLSPDLETWE NDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMR
Sbjct: 68  PFVHSTTLSPDLETWEKNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMR 127

Query: 121 ETTTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAV 180
           ETTTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAV
Sbjct: 128 ETTTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAV 187

Query: 181 LQHQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
           LQHQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS
Sbjct: 188 LQHQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 235

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BLAST of Carg12004 vs. NCBI nr
Match: XP_023545319.1 (urease accessory protein F [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.8 bits (1161), Expect = 1.4e-123
Identity = 225/228 (98.68%), Postives = 227/228 (99.56%), Query Frame = 0 

Query: 1   MDDKQFHWSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLL 60
           MDDKQFHWSQWQLLDSILP+GGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLL
Sbjct: 14  MDDKQFHWSQWQLLDSILPTGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLL 73

Query: 61  PFVHSTTLSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMR 120
           PFVHSTTLSPDLETWE NDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMR
Sbjct: 74  PFVHSTTLSPDLETWEKNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMR 133

Query: 121 ETTTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAV 180
           ET+TGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAV
Sbjct: 134 ETSTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAV 193

Query: 181 LQHQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
           LQHQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS
Sbjct: 194 LQHQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 241

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BLAST of Carg12004 vs. NCBI nr
Match: XP_022999571.1 (urease accessory protein F [Cucurbita maxima] >XP_022999572.1 urease accessory protein F [Cucurbita maxima])

HSP 1 Score: 448.7 bits (1153), Expect = 1.1e-122
Identity = 223/228 (97.81%), Postives = 226/228 (99.12%), Query Frame = 0 

Query: 1   MDDKQFHWSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLL 60
           MDDKQFHWSQWQLLDSILP+GGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLL
Sbjct: 8   MDDKQFHWSQWQLLDSILPTGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLL 67

Query: 61  PFVHSTTLSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMR 120
           PFVHSTTLSPDLETWE NDRFLNAILTNEVSRKAS+TQGSALMRVAAIVFSEISSLKAMR
Sbjct: 68  PFVHSTTLSPDLETWEKNDRFLNAILTNEVSRKASITQGSALMRVAAIVFSEISSLKAMR 127

Query: 121 ETTTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAV 180
           ET+TGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAV
Sbjct: 128 ETSTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAV 187

Query: 181 LQHQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
           LQHQLALVAE TLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS
Sbjct: 188 LQHQLALVAEGTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 235

[Close]
BLAST of Carg12004 vs. NCBI nr
Match: XP_022153866.1 (urease accessory protein F [Momordica charantia] >XP_022153867.1 urease accessory protein F [Momordica charantia])

HSP 1 Score: 411.4 bits (1056), Expect = 2.0e-111
Identity = 201/228 (88.16%), Postives = 213/228 (93.42%), Query Frame = 0 

Query: 1   MDDKQFHWSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLL 60
           MD K   W+QWQLLDS+LP+GGFAHSFGLEAAIQARIVSQPEDLKTFVIH+LDNTGSLLL
Sbjct: 1   MDGKHLQWNQWQLLDSVLPTGGFAHSFGLEAAIQARIVSQPEDLKTFVIHVLDNTGSLLL 60

Query: 61  PFVHSTTLSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMR 120
           PFVHS TLSPDLETW+ NDR L+A+LTNEV RKAS+TQGSALMRVAA+VFSEI SLK MR
Sbjct: 61  PFVHSATLSPDLETWQKNDRLLDAMLTNEVGRKASITQGSALMRVAAVVFSEIPSLKTMR 120

Query: 121 ETTTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAV 180
           ET +GTGAV FHHAPIFGLICGLLGWDS MSQRAYLFIT+RDVISAATRLNLVGPLGAAV
Sbjct: 121 ETFSGTGAVPFHHAPIFGLICGLLGWDSAMSQRAYLFITMRDVISAATRLNLVGPLGAAV 180

Query: 181 LQHQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
           LQHQLALVAED LKKWMNRPVEEACQ+VPLLETVQGCH YLFSRLFCS
Sbjct: 181 LQHQLALVAEDILKKWMNRPVEEACQSVPLLETVQGCHMYLFSRLFCS 228

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BLAST of Carg12004 vs. NCBI nr
Match: XP_004144755.1 (PREDICTED: urease accessory protein F [Cucumis sativus] >XP_011648859.1 PREDICTED: urease accessory protein F [Cucumis sativus] >XP_011648860.1 PREDICTED: urease accessory protein F [Cucumis sativus] >KGN60994.1 hypothetical protein Csa_2G033980 [Cucumis sativus])

HSP 1 Score: 403.7 bits (1036), Expect = 4.2e-109
Identity = 199/228 (87.28%), Postives = 210/228 (92.11%), Query Frame = 0 

Query: 1   MDDKQFHWSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLL 60
           MDDK  HWSQWQLLDSILP+GGFAHSFGLEAAIQA+IVS P+DLKTFVIHLLDNTGSL L
Sbjct: 1   MDDKHCHWSQWQLLDSILPTGGFAHSFGLEAAIQAQIVSSPDDLKTFVIHLLDNTGSLFL 60

Query: 61  PFVHSTTLSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMR 120
           PFVHS T SPD ETW+ ND  L+A+LTNEVSRKASVTQGSALMRV+AIVFSEI SLKAMR
Sbjct: 61  PFVHSATQSPDFETWKKNDMLLDAMLTNEVSRKASVTQGSALMRVSAIVFSEIPSLKAMR 120

Query: 121 ETTTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAV 180
           E   GTGAVSFHHAPIFGLICGLLGWD TMSQRAYLFITLRDVISAATRLNLVGPLGAAV
Sbjct: 121 ENLYGTGAVSFHHAPIFGLICGLLGWDGTMSQRAYLFITLRDVISAATRLNLVGPLGAAV 180

Query: 181 LQHQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
           LQHQLA VAED LK+WMNRPVEEACQTVPLLETVQGCH+ LFS++FCS
Sbjct: 181 LQHQLAFVAEDILKRWMNRPVEEACQTVPLLETVQGCHSCLFSKMFCS 228

[Close]
BLAST of Carg12004 vs. TAIR10
Match: AT1G21840.1 (urease accessory protein F)

HSP 1 Score: 328.2 bits (840), Expect = 4.1e-90
Identity = 156/221 (70.59%), Postives = 186/221 (84.16%), Query Frame = 0 

Query: 8   WSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLLPFVHSTT 67
           WSQWQLLDSILP+GGFAHSFGLEAAIQ R+VS PEDL+T +IH+LDNT SLLLPFV+S  
Sbjct: 20  WSQWQLLDSILPTGGFAHSFGLEAAIQTRLVSSPEDLETHIIHVLDNTASLLLPFVYSAL 79

Query: 68  LSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMRETTTGTG 127
            SPD+ETW   D  LNA LTN+VS KAS++QGSAL R+AA VF+E+ +LK +R+ + G+ 
Sbjct: 80  KSPDIETWHKLDGILNATLTNQVSSKASMSQGSALFRIAASVFTEVPNLKMIRDASLGSK 139

Query: 128 AVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAVLQHQLAL 187
            V FHHAPIFGL+CGLLG DS  SQRAYLF+TLRDV+SAATRLN+VGP+GA+V+QH++A+
Sbjct: 140 NVCFHHAPIFGLVCGLLGMDSETSQRAYLFVTLRDVLSAATRLNIVGPMGASVMQHRIAI 199

Query: 188 VAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
           V E  L+KWMNR   EACQT PLL+ VQGCH YLFSRLFCS
Sbjct: 200 VTETVLEKWMNREAGEACQTSPLLDVVQGCHGYLFSRLFCS 240

[Close]
BLAST of Carg12004 vs. Swiss-Prot
Match: sp|Q9XHZ3|UREF_ARATH (Urease accessory protein F OS=Arabidopsis thaliana OX=3702 GN=UREF PE=2 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 7.4e-89
Identity = 156/221 (70.59%), Postives = 186/221 (84.16%), Query Frame = 0 

Query: 8   WSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLLPFVHSTT 67
           WSQWQLLDSILP+GGFAHSFGLEAAIQ R+VS PEDL+T +IH+LDNT SLLLPFV+S  
Sbjct: 20  WSQWQLLDSILPTGGFAHSFGLEAAIQTRLVSSPEDLETHIIHVLDNTASLLLPFVYSAL 79

Query: 68  LSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMRETTTGTG 127
            SPD+ETW   D  LNA LTN+VS KAS++QGSAL R+AA VF+E+ +LK +R+ + G+ 
Sbjct: 80  KSPDIETWHKLDGILNATLTNQVSSKASMSQGSALFRIAASVFTEVPNLKMIRDASLGSK 139

Query: 128 AVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAVLQHQLAL 187
            V FHHAPIFGL+CGLLG DS  SQRAYLF+TLRDV+SAATRLN+VGP+GA+V+QH++A+
Sbjct: 140 NVCFHHAPIFGLVCGLLGMDSETSQRAYLFVTLRDVLSAATRLNIVGPMGASVMQHRIAI 199

Query: 188 VAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
           V E  L+KWMNR   EACQT PLL+ VQGCH YLFSRLFCS
Sbjct: 200 VTETVLEKWMNREAGEACQTSPLLDVVQGCHGYLFSRLFCS 240

[Close]
BLAST of Carg12004 vs. Swiss-Prot
Match: sp|E0ZS46|UREF_ORYSI (Urease accessory protein F OS=Oryza sativa subsp. indica OX=39946 GN=UREF PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.7e-83
Identity = 149/221 (67.42%), Postives = 187/221 (84.62%), Query Frame = 0 

Query: 8   WSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLLPFVHSTT 67
           WSQWQLLDSILP+GGFAHS+GLEAA+Q+R+V+ PE+L++FV+ +L+NTGSLLLPFV    
Sbjct: 41  WSQWQLLDSILPTGGFAHSYGLEAAMQSRMVNNPEELRSFVVQVLENTGSLLLPFVCCAN 100

Query: 68  LSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMRETTTGTG 127
            SPD  TW   D+ L A+LTNEVSRKAS++QGSAL+RVAA VF+EI SL+ +R+T  G+ 
Sbjct: 101 KSPDAATWVKLDQLLEAMLTNEVSRKASMSQGSALLRVAASVFTEIQSLQDLRQTFLGSK 160

Query: 128 AVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAVLQHQLAL 187
            VSFHHAPIFGLICGL+G+DS  +QRAY+F+T+RDVISAATRLNL+GPL A+VLQHQ+A 
Sbjct: 161 IVSFHHAPIFGLICGLVGFDSETTQRAYMFVTMRDVISAATRLNLIGPLAASVLQHQVAE 220

Query: 188 VAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
            AE  ++KW +R VEEA QT PLL+ +QGCH Y+FSRLFC+
Sbjct: 221 DAERMVQKWKDRGVEEATQTSPLLDALQGCHAYMFSRLFCT 261

[Close]
BLAST of Carg12004 vs. Swiss-Prot
Match: sp|Q0E3L5|UREF_ORYSJ (Urease accessory protein F OS=Oryza sativa subsp. japonica OX=39947 GN=UREF PE=2 SV=2)

HSP 1 Score: 309.7 bits (792), Expect = 2.7e-83
Identity = 149/221 (67.42%), Postives = 187/221 (84.62%), Query Frame = 0 

Query: 8   WSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLLPFVHSTT 67
           WSQWQLLDSILP+GGFAHS+GLEAA+Q+R+V+ PE+L++FV+ +L+NTGSLLLPFV    
Sbjct: 41  WSQWQLLDSILPTGGFAHSYGLEAAMQSRMVNNPEELRSFVVQVLENTGSLLLPFVCCAN 100

Query: 68  LSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMRETTTGTG 127
            SPD  TW   D+ L A+LTNEVSRKAS++QGSAL+RVAA VF+EI SL+ +R+T  G+ 
Sbjct: 101 KSPDAATWVKLDQLLEAMLTNEVSRKASMSQGSALLRVAASVFTEIQSLQDLRQTFLGSK 160

Query: 128 AVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAVLQHQLAL 187
            VSFHHAPIFGLICGL+G+DS  +QRAY+F+T+RDVISAATRLNL+GPL A+VLQHQ+A 
Sbjct: 161 IVSFHHAPIFGLICGLVGFDSETTQRAYMFVTMRDVISAATRLNLIGPLAASVLQHQVAE 220

Query: 188 VAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
            AE  ++KW +R VEEA QT PLL+ +QGCH Y+FSRLFC+
Sbjct: 221 DAERMVQKWKDRGVEEATQTSPLLDALQGCHAYMFSRLFCT 261

[Close]
BLAST of Carg12004 vs. Swiss-Prot
Match: sp|B7K911|UREF_CYAP7 (Urease accessory protein UreF OS=Cyanothece sp. (strain PCC 7424) OX=65393 GN=ureF PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.6e-14
Identity = 67/221 (30.32%), Postives = 100/221 (45.25%), Query Frame = 0 

Query: 12  QLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDN----TGSLLLPFVHSTT 71
           QL DS  PSG F  S GLEA  Q   +   +DL+ F+  LL N    T  + L   +  +
Sbjct: 14  QLSDSFFPSGSFTLSHGLEALAQGEQIHSIKDLEIFLQILLHNKLGTTDLVALIHAYRGS 73

Query: 72  LSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMRETTTGTG 131
              DL+     D  L A    E +R+     G AL+ VA   + +       +ET  GT 
Sbjct: 74  KREDLDAVREADHQLFAQTLIEKNREMGRKSGRALLMVARETWQDTQLETLEKETAKGT- 133

Query: 132 AVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAVLQHQLAL 191
            ++  H  IF ++  + G   T +  A+L   +  ++ AA RLN++G L A  +  +LA 
Sbjct: 134 -INGLHPIIFAVVGRVAGLSETDTGLAFLHSFITGLLGAAIRLNIIGHLQAQKILLKLAP 193

Query: 192 VAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
             E T +K     + E     PL++  Q  H  L  RLF +
Sbjct: 194 DLETTYQKATEINLNEMFSCTPLIDIAQMNHQNLDYRLFAN 232

[Close]
BLAST of Carg12004 vs. Swiss-Prot
Match: sp|Q117Z4|UREF_TRIEI (Urease accessory protein UreF OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=ureF PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-11
Identity = 62/221 (28.05%), Postives = 101/221 (45.70%), Query Frame = 0 

Query: 12  QLLDSILPSGGFAHSFGLEAAIQ-ARIVSQPEDLKTFVIHLLDNTG-SLLLPFVHS--TT 71
           QL DS  P+G F  S GLE  +Q  +I SQPE L    I L +  G S ++  +HS    
Sbjct: 14  QLSDSFFPTGSFTFSHGLETLVQTGKIQSQPEILYFLQILLRNKVGVSDVVALIHSYRGC 73

Query: 72  LSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMRETTTGTG 131
            + D+E     DR L        +R+     G AL+ VA+  + +   LK +      +G
Sbjct: 74  KNGDIEAVRVADRMLFVQTAIAKNRETQRQSGRALLMVASSTWQD-ERLKTLNIDAV-SG 133

Query: 132 AVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAVLQHQLAL 191
            +   H  IFG +  ++G D   +  A+L   + +++ AA RL ++G + A  +  QL  
Sbjct: 134 NIHCLHPVIFGAVTSVVGLDERNAVLAFLHGLVTNILGAAIRLGILGHIQAQQILLQLVP 193

Query: 192 VAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
             E      ++  +E+     P ++  Q  H  L  +LF +
Sbjct: 194 DIEAVWSTAVSMNLEQMWSCTPFIDIAQMQHPKLAHKLFAN 232

[Close]
BLAST of Carg12004 vs. TrEMBL
Match: tr|A0A0A0LJ08|A0A0A0LJ08_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033980 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 2.8e-109
Identity = 199/228 (87.28%), Postives = 210/228 (92.11%), Query Frame = 0 

Query: 1   MDDKQFHWSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLL 60
           MDDK  HWSQWQLLDSILP+GGFAHSFGLEAAIQA+IVS P+DLKTFVIHLLDNTGSL L
Sbjct: 1   MDDKHCHWSQWQLLDSILPTGGFAHSFGLEAAIQAQIVSSPDDLKTFVIHLLDNTGSLFL 60

Query: 61  PFVHSTTLSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMR 120
           PFVHS T SPD ETW+ ND  L+A+LTNEVSRKASVTQGSALMRV+AIVFSEI SLKAMR
Sbjct: 61  PFVHSATQSPDFETWKKNDMLLDAMLTNEVSRKASVTQGSALMRVSAIVFSEIPSLKAMR 120

Query: 121 ETTTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAV 180
           E   GTGAVSFHHAPIFGLICGLLGWD TMSQRAYLFITLRDVISAATRLNLVGPLGAAV
Sbjct: 121 ENLYGTGAVSFHHAPIFGLICGLLGWDGTMSQRAYLFITLRDVISAATRLNLVGPLGAAV 180

Query: 181 LQHQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
           LQHQLA VAED LK+WMNRPVEEACQTVPLLETVQGCH+ LFS++FCS
Sbjct: 181 LQHQLAFVAEDILKRWMNRPVEEACQTVPLLETVQGCHSCLFSKMFCS 228

[Close]
BLAST of Carg12004 vs. TrEMBL
Match: tr|A0A1S3BWP6|A0A1S3BWP6_CUCME (urease accessory protein F OS=Cucumis melo OX=3656 GN=LOC103494267 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.6e-101
Identity = 189/213 (88.73%), Postives = 198/213 (92.96%), Query Frame = 0 

Query: 1   MDDKQFHWSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLL 60
           MDDK+ HWSQWQLLDSILP+GGFAHSFGLEAAIQA+IVS PEDLKTFVIHLLDNTGSL L
Sbjct: 1   MDDKRCHWSQWQLLDSILPTGGFAHSFGLEAAIQAQIVSSPEDLKTFVIHLLDNTGSLFL 60

Query: 61  PFVHSTTLSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMR 120
           PFV+S TLSPD ETW+ NDR L+AILTNEVSRKASVTQGSALMRV+AIVFSEISSLKAMR
Sbjct: 61  PFVYSATLSPDFETWKKNDRLLDAILTNEVSRKASVTQGSALMRVSAIVFSEISSLKAMR 120

Query: 121 ETTTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAV 180
           E   GTG VSFHHAPIFGLICGLLGWD TMSQRAYLFITLRDVISAATRLNLVGPLGAAV
Sbjct: 121 EHLYGTGTVSFHHAPIFGLICGLLGWDGTMSQRAYLFITLRDVISAATRLNLVGPLGAAV 180

Query: 181 LQHQLALVAEDTLKKWMNRPVEEACQTVPLLET 214
           LQHQLA VAE+ LK+WMNRPVEEACQ VPLLET
Sbjct: 181 LQHQLAQVAENVLKRWMNRPVEEACQAVPLLET 213

[Close]
BLAST of Carg12004 vs. TrEMBL
Match: tr|A0A2I4FN91|A0A2I4FN91_9ROSI (urease accessory protein F isoform X1 OS=Juglans regia OX=51240 GN=LOC109000628 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 2.7e-96
Identity = 176/226 (77.88%), Postives = 198/226 (87.61%), Query Frame = 0 

Query: 3   DKQFHWSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLLPF 62
           D    WSQWQL+DSILP+GGFAHSFGLEAAIQARI+S PEDL+TFVIH+L+NTGSLLLPF
Sbjct: 87  DSHLQWSQWQLIDSILPTGGFAHSFGLEAAIQARIISGPEDLQTFVIHVLENTGSLLLPF 146

Query: 63  VHSTTLSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMRET 122
           V S T+SPDLETW+  DR L+A+LTNEV RKAS+ QGSALMRVAA VFSE  SLK+MR+T
Sbjct: 147 VFSATISPDLETWQKLDRTLDAMLTNEVGRKASIAQGSALMRVAAAVFSETPSLKSMRDT 206

Query: 123 TTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAVLQ 182
           + G+G VSFHHAPIFGL CGLLG DS  SQRAYLFIT+RDVISAATRLNLVGP+GAAVLQ
Sbjct: 207 SVGSGVVSFHHAPIFGLTCGLLGLDSRTSQRAYLFITMRDVISAATRLNLVGPMGAAVLQ 266

Query: 183 HQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
           HQ+ ++AE  L KWM+R VEEACQT PLL+TVQGCH YLFSRLFCS
Sbjct: 267 HQIVVLAEAILTKWMDRTVEEACQTSPLLDTVQGCHAYLFSRLFCS 312

[Close]
BLAST of Carg12004 vs. TrEMBL
Match: tr|A0A0D2W4U1|A0A0D2W4U1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G107000 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 9.7e-94
Identity = 168/226 (74.34%), Postives = 199/226 (88.05%), Query Frame = 0 

Query: 3   DKQFHWSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLLPF 62
           D    WSQWQLLDSILP+GGFAHSFGLEAAIQAR+VS P+DL+TFVIHLL+NTGSLLLPF
Sbjct: 58  DPSLQWSQWQLLDSILPTGGFAHSFGLEAAIQARLVSGPDDLQTFVIHLLENTGSLLLPF 117

Query: 63  VHSTTLSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMRET 122
           V+S T++P L+ W+  DR L+A L+NEV RKASV+QGS+LMRVAA VF+E+ SLK+MR+ 
Sbjct: 118 VYSATMNPTLDNWQKLDRILDATLSNEVGRKASVSQGSSLMRVAASVFTELPSLKSMRDV 177

Query: 123 TTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAVLQ 182
             G+G VSFHHAP+FG+ICGLLG DS  SQRAY+F+T+RDVISAATRLNLVGPLGAAVLQ
Sbjct: 178 CIGSGVVSFHHAPVFGMICGLLGMDSGTSQRAYIFMTMRDVISAATRLNLVGPLGAAVLQ 237

Query: 183 HQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
           H++A VAE  +KKWM+R VE+ACQT PLL+T+QGCHTYLFSRLFCS
Sbjct: 238 HRVAYVAESMVKKWMDRSVEDACQTAPLLDTIQGCHTYLFSRLFCS 283

[Close]
BLAST of Carg12004 vs. TrEMBL
Match: tr|A0A1U8NKR7|A0A1U8NKR7_GOSHI (urease accessory protein F-like OS=Gossypium hirsutum OX=3635 GN=LOC107949525 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.3e-93
Identity = 168/226 (74.34%), Postives = 199/226 (88.05%), Query Frame = 0 

Query: 3   DKQFHWSQWQLLDSILPSGGFAHSFGLEAAIQARIVSQPEDLKTFVIHLLDNTGSLLLPF 62
           D    WSQWQLLDSILP+GGFAHSFGLEAAIQAR+VS P+DL+TFVIHLL+NTGSLLLPF
Sbjct: 58  DPSLKWSQWQLLDSILPTGGFAHSFGLEAAIQARLVSGPDDLQTFVIHLLENTGSLLLPF 117

Query: 63  VHSTTLSPDLETWENNDRFLNAILTNEVSRKASVTQGSALMRVAAIVFSEISSLKAMRET 122
           V+S T++P L+ W+  DR L+A L+NEV RKASV+QGS+LMRVAA VF+E+ SLK+MR+ 
Sbjct: 118 VYSATMNPTLDNWQKLDRILDATLSNEVGRKASVSQGSSLMRVAASVFTELPSLKSMRDV 177

Query: 123 TTGTGAVSFHHAPIFGLICGLLGWDSTMSQRAYLFITLRDVISAATRLNLVGPLGAAVLQ 182
             G+G VSFHHAP+FG+ICGLLG DS  SQRAY+F+T+RDVISAATRLNLVGPLGAAVLQ
Sbjct: 178 CIGSGVVSFHHAPVFGMICGLLGMDSGTSQRAYIFMTMRDVISAATRLNLVGPLGAAVLQ 237

Query: 183 HQLALVAEDTLKKWMNRPVEEACQTVPLLETVQGCHTYLFSRLFCS 229
           H++A VAE  +KKWM+R VE+ACQT PLL+T+QGCHTYLFSRLFCS
Sbjct: 238 HRVAYVAESMVKKWMDRSVEDACQTAPLLDTIQGCHTYLFSRLFCS 283

The following BLAST results are available for this feature:
BLAST of Carg12004 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022946416.14.7e-12499.12urease accessory protein F [Cucurbita moschata][more]
XP_023545319.11.4e-12398.68urease accessory protein F [Cucurbita pepo subsp. pepo][more]
XP_022999571.11.1e-12297.81urease accessory protein F [Cucurbita maxima] >XP_022999572.1 urease accessory p... [more]
XP_022153866.12.0e-11188.16urease accessory protein F [Momordica charantia] >XP_022153867.1 urease accessor... [more]
XP_004144755.14.2e-10987.28PREDICTED: urease accessory protein F [Cucumis sativus] >XP_011648859.1 PREDICTE... [more]
BLAST of Carg12004 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G21840.14.1e-9070.59urease accessory protein F[more]
BLAST of Carg12004 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9XHZ3|UREF_ARATH7.4e-8970.59Urease accessory protein F OS=Arabidopsis thaliana OX=3702 GN=UREF PE=2 SV=1[more]
sp|E0ZS46|UREF_ORYSI2.7e-8367.42Urease accessory protein F OS=Oryza sativa subsp. indica OX=39946 GN=UREF PE=2 S... [more]
sp|Q0E3L5|UREF_ORYSJ2.7e-8367.42Urease accessory protein F OS=Oryza sativa subsp. japonica OX=39947 GN=UREF PE=2... [more]
sp|B7K911|UREF_CYAP74.6e-1430.32Urease accessory protein UreF OS=Cyanothece sp. (strain PCC 7424) OX=65393 GN=ur... [more]
sp|Q117Z4|UREF_TRIEI1.6e-1128.05Urease accessory protein UreF OS=Trichodesmium erythraeum (strain IMS101) OX=203... [more]
BLAST of Carg12004 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LJ08|A0A0A0LJ08_CUCSA2.8e-10987.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033980 PE=4 SV=1[more]
tr|A0A1S3BWP6|A0A1S3BWP6_CUCME1.6e-10188.73urease accessory protein F OS=Cucumis melo OX=3656 GN=LOC103494267 PE=4 SV=1[more]
tr|A0A2I4FN91|A0A2I4FN91_9ROSI2.7e-9677.88urease accessory protein F isoform X1 OS=Juglans regia OX=51240 GN=LOC109000628 ... [more]
tr|A0A0D2W4U1|A0A0D2W4U1_GOSRA9.7e-9474.34Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G107000 PE=4 ... [more]
tr|A0A1U8NKR7|A0A1U8NKR7_GOSHI1.3e-9374.34urease accessory protein F-like OS=Gossypium hirsutum OX=3635 GN=LOC107949525 PE... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016151nickel cation binding
Vocabulary: Biological Process
TermDefinition
GO:0006807nitrogen compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR002639UreF
IPR038277UreF_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006807 nitrogen compound metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016151 nickel cation binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12004-RACarg12004-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038277UreF domain superfamilyGENE3DG3DSA:1.10.4190.10coord: 3..207
e-value: 2.0E-30
score: 108.1
IPR002639Urease accessory protein UreFPFAMPF01730UreFcoord: 38..185
e-value: 2.2E-17
score: 63.8
IPR002639Urease accessory protein UreFPIRSFPIRSF009467Urease_acces_UreFcoord: 3..228
e-value: 4.6E-45
score: 152.1
NoneNo IPR availablePANTHERPTHR33620:SF1UREASE ACCESSORY PROTEIN Fcoord: 1..228
NoneNo IPR availablePANTHERPTHR33620FAMILY NOT NAMEDcoord: 1..228