Carg11992 (gene) Silver-seed gourd

NameCarg11992
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPectinesterase inhibitor
LocationCucurbita_argyrosperma_scaffold_037 : 342022 .. 342555 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGCTCTCATGGCATCCCTGTTCTTCTTCTGGCAGTTTTTTACCTAGCCATTTTCCCTTCTCATGGAATCCTCCATGGAAATCTGGCCACCATTTGCTATAAAACCCCCGATCCGTTCAGCTGCCAGAGAATCCTTGGTAACGTTCCCGGTACCATCTCGGCTGACCTCCCTAAGCTCTCGCTTATATCCATCAATCTGACGAAGAACCAAGCCGATCAAAACCTTGATTCCTTCTCCAAATTAAGTAAGAATGAGAGTGATCCTGAGCTGAAGAAGAGTTTCAAGCATTGTGTGAAGTATTACCATGAAATTCAAGCACATATCCAGAAAGCCTTTAAGCTCTCACGGAAGAAGATTTTCAGAGATAATCATCCATTGGTAACATCAAAGAAACTTGTTAAAAGGTGTAATCAAGCCATCAGAATCAACTCATTGGATATTGAAGTCATGAACAAACGTATGATCCTAAGCTGTGATATTTCAATGAGTGTAAATCACTATGCTACTGCTAATGCCCACATTCAGTAA

mRNA sequence

ATGGGTTGCTCTCATGGCATCCCTGTTCTTCTTCTGGCAGTTTTTTACCTAGCCATTTTCCCTTCTCATGGAATCCTCCATGGAAATCTGGCCACCATTTGCTATAAAACCCCCGATCCGTTCAGCTGCCAGAGAATCCTTGGTAACGTTCCCGGTACCATCTCGGCTGACCTCCCTAAGCTCTCGCTTATATCCATCAATCTGACGAAGAACCAAGCCGATCAAAACCTTGATTCCTTCTCCAAATTAAGTAAGAATGAGAGTGATCCTGAGCTGAAGAAGAGTTTCAAGCATTGTGTGAAGTATTACCATGAAATTCAAGCACATATCCAGAAAGCCTTTAAGCTCTCACGGAAGAAGATTTTCAGAGATAATCATCCATTGGTAACATCAAAGAAACTTGTTAAAAGGTGTAATCAAGCCATCAGAATCAACTCATTGGATATTGAAGTCATGAACAAACGTATGATCCTAAGCTGTGATATTTCAATGAGTGTAAATCACTATGCTACTGCTAATGCCCACATTCAGTAA

Coding sequence (CDS)

ATGGGTTGCTCTCATGGCATCCCTGTTCTTCTTCTGGCAGTTTTTTACCTAGCCATTTTCCCTTCTCATGGAATCCTCCATGGAAATCTGGCCACCATTTGCTATAAAACCCCCGATCCGTTCAGCTGCCAGAGAATCCTTGGTAACGTTCCCGGTACCATCTCGGCTGACCTCCCTAAGCTCTCGCTTATATCCATCAATCTGACGAAGAACCAAGCCGATCAAAACCTTGATTCCTTCTCCAAATTAAGTAAGAATGAGAGTGATCCTGAGCTGAAGAAGAGTTTCAAGCATTGTGTGAAGTATTACCATGAAATTCAAGCACATATCCAGAAAGCCTTTAAGCTCTCACGGAAGAAGATTTTCAGAGATAATCATCCATTGGTAACATCAAAGAAACTTGTTAAAAGGTGTAATCAAGCCATCAGAATCAACTCATTGGATATTGAAGTCATGAACAAACGTATGATCCTAAGCTGTGATATTTCAATGAGTGTAAATCACTATGCTACTGCTAATGCCCACATTCAGTAA

Protein sequence

MGCSHGIPVLLLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLSLISINLTKNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIFRDNHPLVTSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAHIQ
BLAST of Carg11992 vs. NCBI nr
Match: KGN61017.1 (hypothetical protein Csa_2G034700 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 7.2e-56
Identity = 117/169 (69.23%), Postives = 136/169 (80.47%), Query Frame = 0

Query: 7   IPVLLLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLSLISI 66
           IP LLLA F L +FPSHGI H NL TIC KT +P  C++IL N   T+SA+LPKLSLI  
Sbjct: 11  IPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSANLPKLSLICS 70

Query: 67  NLTKNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIFRDNH 126
           NL K QADQNLD+F KLSKNESDPE KKSF+HCVKYYHEIQ++IQKA++ S++KIFR+N 
Sbjct: 71  NLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQFSQQKIFRENG 130

Query: 127 PLVTSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAH 176
           PLV SK+LV +C+Q IRINSL IEVMNK MIL CDIS+SVN  A AN H
Sbjct: 131 PLVASKRLVLKCSQTIRINSLYIEVMNKLMILCCDISISVNQCAAANGH 179

BLAST of Carg11992 vs. NCBI nr
Match: XP_010659809.1 (PREDICTED: uncharacterized protein LOC104881393 [Vitis vinifera])

HSP 1 Score: 109.4 bits (272), Expect = 1.3e-20
Identity = 65/159 (40.88%), Postives = 95/159 (59.75%), Query Frame = 0

Query: 11  LLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLSLISINLTK 70
           LL VF L   P+ G+    LA+IC +T +   C+ IL +VPGT SADL  LSLISINLT 
Sbjct: 14  LLMVFSLFTSPTSGVTQETLASICSQTQNQEICEGILESVPGTTSADLHGLSLISINLTM 73

Query: 71  NQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIFRDNHPLVT 130
            Q   N D+F+K   N +D  LK+SF++CV  Y+ I   ++ A++LS KK +        
Sbjct: 74  KQGSSNYDTFTKFMDNSTDTALKESFRNCVSLYNSIMEMLKVAYQLSEKKEYESITQPGE 133

Query: 131 SKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHY 170
           S+ L   C   + I+S   + +++ MI++C+ S+SVN Y
Sbjct: 134 SQTLAYNCANGLPIDS-PTDGISRDMIITCETSVSVNQY 171

BLAST of Carg11992 vs. NCBI nr
Match: XP_007031213.2 (PREDICTED: pectinesterase inhibitor [Theobroma cacao])

HSP 1 Score: 107.1 bits (266), Expect = 6.4e-20
Identity = 62/160 (38.75%), Postives = 88/160 (55.00%), Query Frame = 0

Query: 10  LLLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLSLISINLT 69
           L L V +  I PS  + +  L  IC KT +P  C+ IL   P T SADLP+LSL+SINLT
Sbjct: 11  LTLLVAFSVIHPSSSVPNETLVAICSKTYNPILCESILRGDPRTSSADLPELSLVSINLT 70

Query: 70  KNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIFRDNHPLV 129
             QA  N   F +   N +DP LKK F  CV+ Y  ++ ++ KA+  S    +R+   LV
Sbjct: 71  IEQAANNSQVFVEFHDNTTDPALKKGFNSCVELYQLMEDNLDKAYHRSEGGDYRNITELV 130

Query: 130 TSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHY 170
            S      C  A+ IN + I+ + + ++  C+ S+SVN Y
Sbjct: 131 QSSNQAVECASALAINLVTIDALTRAVVSKCETSISVNQY 170

BLAST of Carg11992 vs. NCBI nr
Match: EOY11715.1 (Uncharacterized protein TCM_026801 [Theobroma cacao])

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19
Identity = 62/160 (38.75%), Postives = 87/160 (54.37%), Query Frame = 0

Query: 10  LLLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLSLISINLT 69
           L L V +  I PS  + +  L  IC KT +P  C  IL   P T SADLP+LSL+SINLT
Sbjct: 11  LTLLVAFSVIHPSSSVPNETLVAICSKTYNPILCASILRGDPRTSSADLPELSLVSINLT 70

Query: 70  KNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIFRDNHPLV 129
             QA  N   F +   N +DP LKK F  CV+ Y  ++ ++ KA+  S    +R+   LV
Sbjct: 71  IEQAANNSQVFVEFHDNTTDPALKKGFNSCVELYQLMEDNLDKAYHRSEGGDYRNITELV 130

Query: 130 TSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHY 170
            S      C  A+ IN + I+ + + ++  C+ S+SVN Y
Sbjct: 131 QSSNQAVECASALAINLVTIDALTRAVVSKCETSVSVNQY 170

BLAST of Carg11992 vs. NCBI nr
Match: XP_007031211.1 (PREDICTED: putative invertase inhibitor [Theobroma cacao] >EOY11713.1 Uncharacterized protein TCM_026799 [Theobroma cacao])

HSP 1 Score: 93.2 bits (230), Expect = 9.5e-16
Identity = 60/167 (35.93%), Postives = 94/167 (56.29%), Query Frame = 0

Query: 4   SHGIPVLLLAVFYLAIFP-SHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLS 63
           S GI V+ +A+  L +   S G+    L TIC+ T +   C+ +L + P T SADLP LS
Sbjct: 3   SVGIAVISVALLALNLISCSSGVEQETLMTICFPTENQEFCENLLMSDPRTSSADLPLLS 62

Query: 64  LISINLTKNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIF 123
           +ISI LT+ QA +N  SF +L  N +DP +K     CV  Y E+ + +++A++LS  K +
Sbjct: 63  VISIQLTEKQAKENHLSFMQLHDNATDPSMKDPLNKCVGIYEEMISKVEEAYQLSMAKRY 122

Query: 124 RDNHPLVTSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHY 170
           +D   L  + KL  +C   I + +     +++ MIL+ + S  VN Y
Sbjct: 123 KDISQLAETTKLAYQCENGIPLKNNASMEISETMILTSETSDYVNIY 169

BLAST of Carg11992 vs. TrEMBL
Match: tr|A0A0A0LK13|A0A0A0LK13_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034700 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 4.8e-56
Identity = 117/169 (69.23%), Postives = 136/169 (80.47%), Query Frame = 0

Query: 7   IPVLLLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLSLISI 66
           IP LLLA F L +FPSHGI H NL TIC KT +P  C++IL N   T+SA+LPKLSLI  
Sbjct: 11  IPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSANLPKLSLICS 70

Query: 67  NLTKNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIFRDNH 126
           NL K QADQNLD+F KLSKNESDPE KKSF+HCVKYYHEIQ++IQKA++ S++KIFR+N 
Sbjct: 71  NLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQFSQQKIFRENG 130

Query: 127 PLVTSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAH 176
           PLV SK+LV +C+Q IRINSL IEVMNK MIL CDIS+SVN  A AN H
Sbjct: 131 PLVASKRLVLKCSQTIRINSLYIEVMNKLMILCCDISISVNQCAAANGH 179

BLAST of Carg11992 vs. TrEMBL
Match: tr|A0A061F340|A0A061F340_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026801 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.4e-20
Identity = 62/160 (38.75%), Postives = 87/160 (54.37%), Query Frame = 0

Query: 10  LLLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLSLISINLT 69
           L L V +  I PS  + +  L  IC KT +P  C  IL   P T SADLP+LSL+SINLT
Sbjct: 11  LTLLVAFSVIHPSSSVPNETLVAICSKTYNPILCASILRGDPRTSSADLPELSLVSINLT 70

Query: 70  KNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIFRDNHPLV 129
             QA  N   F +   N +DP LKK F  CV+ Y  ++ ++ KA+  S    +R+   LV
Sbjct: 71  IEQAANNSQVFVEFHDNTTDPALKKGFNSCVELYQLMEDNLDKAYHRSEGGDYRNITELV 130

Query: 130 TSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHY 170
            S      C  A+ IN + I+ + + ++  C+ S+SVN Y
Sbjct: 131 QSSNQAVECASALAINLVTIDALTRAVVSKCETSVSVNQY 170

BLAST of Carg11992 vs. TrEMBL
Match: tr|A0A061F4A7|A0A061F4A7_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026799 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.3e-16
Identity = 60/167 (35.93%), Postives = 94/167 (56.29%), Query Frame = 0

Query: 4   SHGIPVLLLAVFYLAIFP-SHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLS 63
           S GI V+ +A+  L +   S G+    L TIC+ T +   C+ +L + P T SADLP LS
Sbjct: 3   SVGIAVISVALLALNLISCSSGVEQETLMTICFPTENQEFCENLLMSDPRTSSADLPLLS 62

Query: 64  LISINLTKNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIF 123
           +ISI LT+ QA +N  SF +L  N +DP +K     CV  Y E+ + +++A++LS  K +
Sbjct: 63  VISIQLTEKQAKENHLSFMQLHDNATDPSMKDPLNKCVGIYEEMISKVEEAYQLSMAKRY 122

Query: 124 RDNHPLVTSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHY 170
           +D   L  + KL  +C   I + +     +++ MIL+ + S  VN Y
Sbjct: 123 KDISQLAETTKLAYQCENGIPLKNNASMEISETMILTSETSDYVNIY 169

BLAST of Carg11992 vs. TrEMBL
Match: tr|A0A2N9FU97|A0A2N9FU97_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18373 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 8.2e-16
Identity = 59/173 (34.10%), Postives = 94/173 (54.34%), Query Frame = 0

Query: 1   MGCSHGIPVLLLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPK 60
           MGC      L L V  L I PS G+    LATIC +T +  +C+ IL +   T SADLP 
Sbjct: 1   MGCFPLFSTLTLLVASLLISPSLGVTPDVLATICSQTQNQETCENILTSDQRTSSADLPT 60

Query: 61  LSLISINLTKNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKK 120
           LSLIS++LT  QA  N +SF++   N +D  +K  F +C++ Y ++Q  ++ A+ LS+++
Sbjct: 61  LSLISLDLTTKQASDNYNSFTQFHDNATDVSVKNGFDNCLRLYQDMQDKLKAAYTLSQQR 120

Query: 121 IFRDNHPLVTSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHYATAN 174
            ++D   L     L   C   +  +S     + + M+L+   + SVN Y  ++
Sbjct: 121 KYKDITELGQLTTLAYNCENGLPSDS-PTAAITEDMLLTSQTAASVNAYIASS 172

BLAST of Carg11992 vs. TrEMBL
Match: tr|A0A1R3KQP4|A0A1R3KQP4_9ROSI (Pectinesterase inhibitor OS=Corchorus olitorius OX=93759 GN=COLO4_05518 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14
Identity = 58/164 (35.37%), Postives = 87/164 (53.05%), Query Frame = 0

Query: 6   GIPVLLLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLSLIS 65
           GI ++ L V  L I  S G+    L +IC+ T +   C+ +L +   T SADLP LS+IS
Sbjct: 5   GIALVSLGVVVLMISCSAGVKQETLTSICFPTQNQEFCENLLMSDKRTSSADLPLLSIIS 64

Query: 66  INLTKNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIFRDN 125
           I LT  QA +N  +F +L  N +D  +K     CV  Y E+   I++A++LS  K ++D 
Sbjct: 65  IQLTDKQAKKNHHTFQQLHDNATDVSIKGPLNKCVGIYKEMIGKIREAYQLSMSKRYKDI 124

Query: 126 HPLVTSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHY 170
             L  + KL  +C   I ++       ++ MIL+C  S  VN Y
Sbjct: 125 SQLAQATKLAYKCENGIPLSYNLSMASSETMILTCQTSDYVNLY 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN61017.17.2e-5669.23hypothetical protein Csa_2G034700 [Cucumis sativus][more]
XP_010659809.11.3e-2040.88PREDICTED: uncharacterized protein LOC104881393 [Vitis vinifera][more]
XP_007031213.26.4e-2038.75PREDICTED: pectinesterase inhibitor [Theobroma cacao][more]
EOY11715.11.4e-1938.75Uncharacterized protein TCM_026801 [Theobroma cacao][more]
XP_007031211.19.5e-1635.93PREDICTED: putative invertase inhibitor [Theobroma cacao] >EOY11713.1 Uncharacte... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LK13|A0A0A0LK13_CUCSA4.8e-5669.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034700 PE=4 SV=1[more]
tr|A0A061F340|A0A061F340_THECC9.4e-2038.75Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026801 PE=4 SV=1[more]
tr|A0A061F4A7|A0A061F4A7_THECC6.3e-1635.93Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026799 PE=4 SV=1[more]
tr|A0A2N9FU97|A0A2N9FU97_FAGSY8.2e-1634.10Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18373 PE=4 SV=1[more]
tr|A0A1R3KQP4|A0A1R3KQP4_9ROSI1.2e-1435.37Pectinesterase inhibitor OS=Corchorus olitorius OX=93759 GN=COLO4_05518 PE=4 SV=... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046910pectinesterase inhibitor activity
GO:0004857enzyme inhibitor activity
Vocabulary: Biological Process
TermDefinition
GO:0043086negative regulation of catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR034086PMEI_plant
IPR035513Invertase/methylesterase_inhib
IPR006501Pectinesterase_inhib_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0043086 negative regulation of catalytic activity
cellular_component GO:0005575 cellular_component
molecular_function GO:0004857 enzyme inhibitor activity
molecular_function GO:0046910 pectinesterase inhibitor activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11992-RACarg11992-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006501Pectinesterase inhibitor domainSMARTSM00856PMEI_2coord: 25..166
e-value: 0.0027
score: 23.9
IPR006501Pectinesterase inhibitor domainTIGRFAMTIGR01614TIGR01614coord: 17..124
e-value: 2.3E-15
score: 54.3
IPR006501Pectinesterase inhibitor domainPFAMPF04043PMEIcoord: 31..117
e-value: 2.2E-9
score: 37.7
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilyGENE3DG3DSA:1.20.140.40coord: 29..172
e-value: 7.0E-17
score: 63.6
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilySUPERFAMILYSSF101148Plant invertase/pectin methylesterase inhibitorcoord: 30..124
NoneNo IPR availablePANTHERPTHR31080:SF18CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1-RELATEDcoord: 31..163
NoneNo IPR availablePANTHERPTHR31080FAMILY NOT NAMEDcoord: 31..163
IPR034086Pectinesterase inhibitor, plantCDDcd15797PMEIcoord: 32..169
e-value: 8.69973E-21
score: 83.2405