Carg11992 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTGCTCTCATGGCATCCCTGTTCTTCTTCTGGCAGTTTTTTACCTAGCCATTTTCCCTTCTCATGGAATCCTCCATGGAAATCTGGCCACCATTTGCTATAAAACCCCCGATCCGTTCAGCTGCCAGAGAATCCTTGGTAACGTTCCCGGTACCATCTCGGCTGACCTCCCTAAGCTCTCGCTTATATCCATCAATCTGACGAAGAACCAAGCCGATCAAAACCTTGATTCCTTCTCCAAATTAAGTAAGAATGAGAGTGATCCTGAGCTGAAGAAGAGTTTCAAGCATTGTGTGAAGTATTACCATGAAATTCAAGCACATATCCAGAAAGCCTTTAAGCTCTCACGGAAGAAGATTTTCAGAGATAATCATCCATTGGTAACATCAAAGAAACTTGTTAAAAGGTGTAATCAAGCCATCAGAATCAACTCATTGGATATTGAAGTCATGAACAAACGTATGATCCTAAGCTGTGATATTTCAATGAGTGTAAATCACTATGCTACTGCTAATGCCCACATTCAGTAA ATGGGTTGCTCTCATGGCATCCCTGTTCTTCTTCTGGCAGTTTTTTACCTAGCCATTTTCCCTTCTCATGGAATCCTCCATGGAAATCTGGCCACCATTTGCTATAAAACCCCCGATCCGTTCAGCTGCCAGAGAATCCTTGGTAACGTTCCCGGTACCATCTCGGCTGACCTCCCTAAGCTCTCGCTTATATCCATCAATCTGACGAAGAACCAAGCCGATCAAAACCTTGATTCCTTCTCCAAATTAAGTAAGAATGAGAGTGATCCTGAGCTGAAGAAGAGTTTCAAGCATTGTGTGAAGTATTACCATGAAATTCAAGCACATATCCAGAAAGCCTTTAAGCTCTCACGGAAGAAGATTTTCAGAGATAATCATCCATTGGTAACATCAAAGAAACTTGTTAAAAGGTGTAATCAAGCCATCAGAATCAACTCATTGGATATTGAAGTCATGAACAAACGTATGATCCTAAGCTGTGATATTTCAATGAGTGTAAATCACTATGCTACTGCTAATGCCCACATTCAGTAA ATGGGTTGCTCTCATGGCATCCCTGTTCTTCTTCTGGCAGTTTTTTACCTAGCCATTTTCCCTTCTCATGGAATCCTCCATGGAAATCTGGCCACCATTTGCTATAAAACCCCCGATCCGTTCAGCTGCCAGAGAATCCTTGGTAACGTTCCCGGTACCATCTCGGCTGACCTCCCTAAGCTCTCGCTTATATCCATCAATCTGACGAAGAACCAAGCCGATCAAAACCTTGATTCCTTCTCCAAATTAAGTAAGAATGAGAGTGATCCTGAGCTGAAGAAGAGTTTCAAGCATTGTGTGAAGTATTACCATGAAATTCAAGCACATATCCAGAAAGCCTTTAAGCTCTCACGGAAGAAGATTTTCAGAGATAATCATCCATTGGTAACATCAAAGAAACTTGTTAAAAGGTGTAATCAAGCCATCAGAATCAACTCATTGGATATTGAAGTCATGAACAAACGTATGATCCTAAGCTGTGATATTTCAATGAGTGTAAATCACTATGCTACTGCTAATGCCCACATTCAGTAA MGCSHGIPVLLLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLSLISINLTKNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIFRDNHPLVTSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAHIQ
BLAST of Carg11992 vs. NCBI nr
Match: KGN61017.1 (hypothetical protein Csa_2G034700 [Cucumis sativus]) HSP 1 Score: 226.5 bits (576), Expect = 7.2e-56 Identity = 117/169 (69.23%), Postives = 136/169 (80.47%), Query Frame = 0
BLAST of Carg11992 vs. NCBI nr
Match: XP_010659809.1 (PREDICTED: uncharacterized protein LOC104881393 [Vitis vinifera]) HSP 1 Score: 109.4 bits (272), Expect = 1.3e-20 Identity = 65/159 (40.88%), Postives = 95/159 (59.75%), Query Frame = 0
BLAST of Carg11992 vs. NCBI nr
Match: XP_007031213.2 (PREDICTED: pectinesterase inhibitor [Theobroma cacao]) HSP 1 Score: 107.1 bits (266), Expect = 6.4e-20 Identity = 62/160 (38.75%), Postives = 88/160 (55.00%), Query Frame = 0
BLAST of Carg11992 vs. NCBI nr
Match: EOY11715.1 (Uncharacterized protein TCM_026801 [Theobroma cacao]) HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19 Identity = 62/160 (38.75%), Postives = 87/160 (54.37%), Query Frame = 0
BLAST of Carg11992 vs. NCBI nr
Match: XP_007031211.1 (PREDICTED: putative invertase inhibitor [Theobroma cacao] >EOY11713.1 Uncharacterized protein TCM_026799 [Theobroma cacao]) HSP 1 Score: 93.2 bits (230), Expect = 9.5e-16 Identity = 60/167 (35.93%), Postives = 94/167 (56.29%), Query Frame = 0
BLAST of Carg11992 vs. TrEMBL
Match: tr|A0A0A0LK13|A0A0A0LK13_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034700 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 4.8e-56 Identity = 117/169 (69.23%), Postives = 136/169 (80.47%), Query Frame = 0
BLAST of Carg11992 vs. TrEMBL
Match: tr|A0A061F340|A0A061F340_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026801 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 9.4e-20 Identity = 62/160 (38.75%), Postives = 87/160 (54.37%), Query Frame = 0
BLAST of Carg11992 vs. TrEMBL
Match: tr|A0A061F4A7|A0A061F4A7_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026799 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 6.3e-16 Identity = 60/167 (35.93%), Postives = 94/167 (56.29%), Query Frame = 0
BLAST of Carg11992 vs. TrEMBL
Match: tr|A0A2N9FU97|A0A2N9FU97_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18373 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 8.2e-16 Identity = 59/173 (34.10%), Postives = 94/173 (54.34%), Query Frame = 0
BLAST of Carg11992 vs. TrEMBL
Match: tr|A0A1R3KQP4|A0A1R3KQP4_9ROSI (Pectinesterase inhibitor OS=Corchorus olitorius OX=93759 GN=COLO4_05518 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14 Identity = 58/164 (35.37%), Postives = 87/164 (53.05%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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