Carg11750 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11750
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Histone acetyltransferase HPA2 and related acetyltransferase
Location	Cucurbita_argyrosperma_scaffold_035 : 1254961 .. 1256198 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGCAATTCGCCAAATGTTAGGCACTGTGAATCTAGTTATGGGCTCTTCTACAGCCGCCATGCTTACTTCAACGCAGTGTACTGCTATGAAGTCTCTTGCGAGTTTCAGGATTGGTCACCATAGCCACTGCCGACCACTTTCACTGCCTTCGGGATTACCGTCTGCTTCTGGTTTTAGCTCCTGCTTCTTCGCTTCAAGAGGTTCTTCGCCGTTCAACAGAGCAATCGCCGCCGTTAACGATCAAATAGTGTCCTCTGATTCGGCAGACGAGGTAATCGTTAGGTTTCCGAGATTCTTCCGCATTTCGTTTGTCTTCAATTTCTGAAATCCGGCTTGATGTACATTGTTCTTCTAATTTAGGTATGAATTGATCGATACATCAGGGGTTAGGTTTTTCAAAATTATCGATGTCCATGGAAATCTAGTGAAATTGTATGTATGTATTTTTCGAAGTCGAGATGTTTATGTTTAATCACGAAATTGATCCTAATTTGTTGTGCTTCGTTGGTTTTCCCTATTTTGTTCTGGAAATTTTGGGATTGTGGAAGTGAAGCTCACTGGTTTTATGATCGTTTCAATGCCAGCAAGAATCGAACAAGTACTATTTTGTAGTTGCAAATGCGAAGTTCATGCTCGATGAGGAGGAGCATTTCAGGGAGCTTCTCTTCGAGCGGCTTCGCTACTATGCCGAGCGTAGCAAGGAGCAGGACTTTTGGTTGGTGATTGAGCCTAAATTCTTGGAAAGGTTTCCTAATATCACCAAGAGATTGCAGAGACCTGCGGTTGCTCTTGTTTCAACCAATAGTACCTGGATCACGTAAGCTACCTGTTTTCATTTTGCATTATTCACCCTGCTTTGCAATATTGCATTATAAATAAAGGGCGTGGATCCAAAACTACAACCTTAGTTAGGAATAGGGGCATAAACACTAATGTCTAACAACTTGAATTATGCACTGCTCATTGGCTCGGATACTTTATCATGGAAACTTCGATCATCTTGAGGCCTAATAGATTACAAAAAAAAGAAGATGCTACATGTGAGATCCCACATCGGTTAAGGAGGAGAACAAAGCTTCACTCCCTAGCAGACGGTTTTAAAAACCTTGAGAGAAACTCGAAAGGGAAAGTTCAAAGAGGACAATATCGGCTAGCAGTGGGCTTGAGTTATTACAAATGATATTAGAGTTAGACACTAGAAA

mRNA sequence

AGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGCAATTCGCCAAATGTTAGGCACTGTGAATCTAGTTATGGGCTCTTCTACAGCCGCCATGCTTACTTCAACGCAGTGTACTGCTATGAAGTCTCTTGCGAGTTTCAGGATTGGTCACCATAGCCACTGCCGACCACTTTCACTGCCTTCGGGATTACCGTCTGCTTCTGGTTTTAGCTCCTGCTTCTTCGCTTCAAGAGGTTCTTCGCCGTTCAACAGAGCAATCGCCGCCGTTAACGATCAAATAGTGTCCTCTGATTCGGCAGACGAGCAAGAATCGAACAAGTACTATTTTGTAGTTGCAAATGCGAAGTTCATGCTCGATGAGGAGGAGCATTTCAGGGAGCTTCTCTTCGAGCGGCTTCGCTACTATGCCGAGCGTAGCAAGGAGCAGGACTTTTGGTTGGTGATTGAGCCTAAATTCTTGGAAAGGTTTCCTAATATCACCAAGAGATTGCAGAGACCTGCGGTTGCTCTTGTTTCAACCAATAGTACCTGGATCACGTAAGCTACCTGTTTTCATTTTGCATTATTCACCCTGCTTTGCAATATTGCATTATAAATAAAGGGCGTGGATCCAAAACTACAACCTTAGTTAGGAATAGGGGCATAAACACTAATGTCTAACAACTTGAATTATGCACTGCTCATTGGCTCGGATACTTTATCATGGAAACTTCGATCATCTTGAGGCCTAATAGATTACAAAAAAAAGAAGATGCTACATGTGAGATCCCACATCGGTTAAGGAGGAGAACAAAGCTTCACTCCCTAGCAGACGGTTTTAAAAACCTTGAGAGAAACTCGAAAGGGAAAGTTCAAAGAGGACAATATCGGCTAGCAGTGGGCTTGAGTTATTACAAATGATATTAGAGTTAGACACTAGAAA

Coding sequence (CDS)

ATGTTAGGCACTGTGAATCTAGTTATGGGCTCTTCTACAGCCGCCATGCTTACTTCAACGCAGTGTACTGCTATGAAGTCTCTTGCGAGTTTCAGGATTGGTCACCATAGCCACTGCCGACCACTTTCACTGCCTTCGGGATTACCGTCTGCTTCTGGTTTTAGCTCCTGCTTCTTCGCTTCAAGAGGTTCTTCGCCGTTCAACAGAGCAATCGCCGCCGTTAACGATCAAATAGTGTCCTCTGATTCGGCAGACGAGCAAGAATCGAACAAGTACTATTTTGTAGTTGCAAATGCGAAGTTCATGCTCGATGAGGAGGAGCATTTCAGGGAGCTTCTCTTCGAGCGGCTTCGCTACTATGCCGAGCGTAGCAAGGAGCAGGACTTTTGGTTGGTGATTGAGCCTAAATTCTTGGAAAGGTTTCCTAATATCACCAAGAGATTGCAGAGACCTGCGGTTGCTCTTGTTTCAACCAATAGTACCTGGATCACGTAA

Protein sequence

MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFASRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT

Homology

[Close]

BLAST of Carg11750 vs. NCBI nr
Match: XP_022947359.1 (uncharacterized protein LOC111451246 [Cucurbita moschata])

HSP 1 Score: 313.5 bits (802), Expect = 4.1e-82
Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFA 60
           MLGTVNLVMGSS+AAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFA
Sbjct: 1   MLGTVNLVMGSSSAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFA 60

Query: 61  SRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFERLRYY 120
           SRGSSPFN AIAAVNDQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFERLRYY
Sbjct: 61  SRGSSPFNTAIAAVNDQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFERLRYY 120

Query: 121 AERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT 165
           AERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
Sbjct: 121 AERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT 164

[Close]

BLAST of Carg11750 vs. NCBI nr
Match: XP_023007237.1 (uncharacterized protein LOC111499783 [Cucurbita maxima])

HSP 1 Score: 283.1 bits (723), Expect = 6.0e-73
Identity = 150/164 (91.46%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFA 60
           MLGT NLVMGSS+AAMLTSTQCTAMKSLASFRIGHHSHCR LSLPSGLPSASGFSSCFFA
Sbjct: 1   MLGTANLVMGSSSAAMLTSTQCTAMKSLASFRIGHHSHCRALSLPSGLPSASGFSSCFFA 60

Query: 61  SRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFERLRYY 120
           SRGSSP     AAVNDQ+VSS SA EQESNKY+FVVANAKFMLDEEEHFRELLFERLRYY
Sbjct: 61  SRGSSP-----AAVNDQLVSSYSAGEQESNKYHFVVANAKFMLDEEEHFRELLFERLRYY 120

Query: 121 AERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT 165
           A R+KEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT
Sbjct: 121 AARNKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT 159

[Close]

BLAST of Carg11750 vs. NCBI nr
Match: XP_022149576.1 (uncharacterized protein LOC111017973 [Momordica charantia])

HSP 1 Score: 247.3 bits (630), Expect = 3.6e-62
Identity = 132/168 (78.57%), Postives = 147/168 (87.50%), Query Frame = 0


Query: 1   MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFA 60
           MLGTVNLVMGSS+AAM+T  Q  A+KSLAS R  HH+HCR LSLP G  +ASG +SCF  
Sbjct: 1   MLGTVNLVMGSSSAAMVTPAQFAAVKSLASARASHHTHCRTLSLPLGFANASGSTSCFLP 60

Query: 61  SRG---SSPFNRAIAAVN-DQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFER 120
           SRG   SSPF+ AIAAVN +Q+VSSD AD+QE+NKYYF+VANAKFMLDEEEHF+ELLFER
Sbjct: 61  SRGSSPSSPFSTAIAAVNSNQLVSSDPADKQEANKYYFLVANAKFMLDEEEHFKELLFER 120

Query: 121 LRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT 165
           LRYY ER+KEQDFWLVIEPKFLE+FPNITKRLQRPAVALVSTNSTWIT
Sbjct: 121 LRYYGERNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWIT 168

[Close]

BLAST of Carg11750 vs. NCBI nr
Match: XP_022944632.1 (uncharacterized protein LOC111449035 [Cucurbita moschata] >XP_023512536.1 uncharacterized protein LOC111777251 [Cucurbita pepo subsp. pepo] >XP_023512537.1 uncharacterized protein LOC111777251 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.0 bits (624), Expect = 1.8e-61
Identity = 134/168 (79.76%), Postives = 147/168 (87.50%), Query Frame = 0


Query: 1   MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFA 60
           MLGTVNLVMGSS+AAM T TQC A+KSLAS +IG H+HCR  SLP GL SASG S+ F +
Sbjct: 1   MLGTVNLVMGSSSAAMATPTQCAAVKSLASSKIGLHNHCRTFSLPLGLASASGSSAFFSS 60

Query: 61  SRGSS---PFNRAIAAVN-DQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFER 120
            RGSS    FN AIAAVN DQIVSSDSAD++ESNKYYF+VANAKFMLDEEEHF+ELLFER
Sbjct: 61  HRGSSLSLRFNTAIAAVNSDQIVSSDSADKEESNKYYFLVANAKFMLDEEEHFKELLFER 120

Query: 121 LRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT 165
           LR Y ER+KEQDFWLVIEPKFL++FPNITKRLQRPAVALVSTNSTWIT
Sbjct: 121 LRNYGERNKEQDFWLVIEPKFLDKFPNITKRLQRPAVALVSTNSTWIT 168

[Close]

BLAST of Carg11750 vs. NCBI nr
Match: XP_022986936.1 (uncharacterized protein LOC111484525 [Cucurbita maxima])

HSP 1 Score: 243.8 bits (621), Expect = 4.0e-61
Identity = 133/169 (78.70%), Postives = 146/169 (86.39%), Query Frame = 0


Query: 1   MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFA 60
           MLGTVNLVMGSS+AAM T TQC A+KSLAS +IG H+HCR  SLP GL SASG SS F +
Sbjct: 1   MLGTVNLVMGSSSAAMATPTQCAAVKSLASSKIGLHNHCRTFSLPLGLASASGSSSFFLS 60

Query: 61  SRGSS----PFNRAIAAVN-DQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFE 120
            RGSS     F  A+AAVN DQIVSSDSAD++ESNKYYF+VANAKFMLDEEEHF+ELLFE
Sbjct: 61  HRGSSLSFLRFKTAVAAVNSDQIVSSDSADKEESNKYYFLVANAKFMLDEEEHFKELLFE 120

Query: 121 RLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT 165
           RLR Y ER+KEQDFWLVIEPKFL++FPNITKRLQRPAVALVSTNSTWIT
Sbjct: 121 RLRNYGERNKEQDFWLVIEPKFLDKFPNITKRLQRPAVALVSTNSTWIT 169

[Close]

BLAST of Carg11750 vs. TAIR10
Match: AT5G58250.1 (unknown protein)

HSP 1 Score: 129.0 bits (323), Expect = 2.6e-30
Identity = 83/159 (52.20%), Postives = 98/159 (61.64%), Query Frame = 0


Query: 8   VMGSSTAAM-LTSTQCTAMKSLASFRIGHHSHCRPLSLPS-GLPSASGFSSCFFASRGSS 67
           V G+ T A+  T+  C     L S      +    LS PS  LPS          S  SS
Sbjct: 4   VTGALTVAVPPTAAACRTKPFLISSSFPKQTKKLHLSSPSLSLPS----------SHFSS 63

Query: 68  PFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFERLRYYAERSK 127
            F  A  ++  Q     S ++ ES KY+F+VANAKFMLDEEEHF+E LFERLRY+ ER  
Sbjct: 64  SFKTAATSIEQQ----SSVNKGESTKYHFLVANAKFMLDEEEHFQEQLFERLRYFGEREL 123

Query: 128 EQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT 165
            QDFWLVIEPKFL+ FP IT+RL+RPAVALVSTN TWIT
Sbjct: 124 VQDFWLVIEPKFLDNFPKITQRLRRPAVALVSTNGTWIT 148

[Close]

BLAST of Carg11750 vs. Swiss-Prot
Match: sp|P72777|YC54L_SYNY3 (Ycf54-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1780 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 92  YYFVVANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRP 151
           YY+ +A+ KF+L EEE F E+L ER R Y E++KE DFW VI+P FL        + + P
Sbjct: 31  YYYALASQKFLL-EEEPFEEVLKERRRDYGEKNKEIDFWQVIQPAFLNAPELAEAKAKAP 90

Query: 152 A--VALVSTNSTWI 164
              VA+VSTN ++I
Sbjct: 91  EKNVAIVSTNKSFI 103

[Close]

BLAST of Carg11750 vs. Swiss-Prot
Match: sp|P51204|YCF54_PORPU (Uncharacterized protein ycf54 OS=Porphyra purpurea OX=2787 GN=ycf54 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-07
Identity = 32/77 (41.56%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 92  YYFVVANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLE-----RFPNITK 151
           YYF +A+  F+L EE    E+  ER+ YY   +KE DFWL+  PKFL      +F N+  
Sbjct: 4   YYFALASQNFLLSEEP-LEEVFRERINYYQSNNKEIDFWLIPNPKFLNKPAMIKFKNL-- 63

Query: 152 RLQRPAVALVSTNSTWI 164
            +   A+A++STNS +I
Sbjct: 64  -VPNEAIAIISTNSIFI 76

[Close]

BLAST of Carg11750 vs. Swiss-Prot
Match: sp|Q1XDT3|YCF54_PYRYE (Uncharacterized protein ycf54 OS=Pyropia yezoensis OX=2788 GN=ycf54 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 9.6e-06
Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 0


Query: 92  YYFVVANAKFMLDEEEHFRELLFERLRYYAERSKEQDFWLVIEPKFLERFPNITKR--LQ 151
           YYF +A+  F+L  +E   E+  ER+ YY   +K  DFWL+  P FLE+   I+ +  + 
Sbjct: 4   YYFALASQNFLL-VQEPLEEVFRERVNYYQSNNKAIDFWLIPNPSFLEKPEMISFKNLVP 63

Query: 152 RPAVALVSTNSTWI 164
           + AVA++STN  +I
Sbjct: 64  KDAVAIISTNPIFI 76

[Close]

BLAST of Carg11750 vs. TrEMBL
Match: tr|A0A0A0KB63|A0A0A0KB63_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133820 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.3e-52
Identity = 120/167 (71.86%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 1   MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFA 60
           MLGTV+LVMGSS+AA+ TST   A+KSL + RIGHH+H   LS P  LPS S F+S F +
Sbjct: 1   MLGTVSLVMGSSSAAVATSTHFPALKSLPTSRIGHHNHFPTLSFPFVLPSTSIFTSSFLS 60

Query: 61  ---SRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFERL 120
              S  SSPFN AIAAVN     SDSAD+QESNKYYF+VANAKFMLDEEEHF+ELLFERL
Sbjct: 61  SPLSSLSSPFNTAIAAVN-----SDSADKQESNKYYFLVANAKFMLDEEEHFKELLFERL 120

Query: 121 RYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT 165
           R ++ER+KEQ+FWLVIEPKFL++FPNITKRL+RPAVALVST+STWIT
Sbjct: 121 RNFSERNKEQNFWLVIEPKFLDKFPNITKRLRRPAVALVSTDSTWIT 162

[Close]

BLAST of Carg11750 vs. TrEMBL
Match: tr|A0A1S3C2E4|A0A1S3C2E4_CUCME (uncharacterized protein LOC103496259 OS=Cucumis melo OX=3656 GN=LOC103496259 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.6e-52
Identity = 121/167 (72.46%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 1   MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFA 60
           MLGT NLVMGSS+AA+ TST   A+KSL +  IGHH+     SLP  LPS S FSSCF +
Sbjct: 1   MLGTANLVMGSSSAAVATSTHFAAVKSLPTSGIGHHNRFPTPSLPLLLPSTSIFSSCFLS 60

Query: 61  ---SRGSSPFNRAIAAVNDQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFERL 120
              S  SSPFN AIAAVN     SDSAD+QES KYYF+VANAKFMLDEEEHF+ELLFERL
Sbjct: 61  SPLSSLSSPFNTAIAAVN-----SDSADKQESIKYYFLVANAKFMLDEEEHFKELLFERL 120

Query: 121 RYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWIT 165
           R Y ER+KEQDFWLVIEPKFL++FPNITKRL+RPAVALVST+STWIT
Sbjct: 121 RNYGERNKEQDFWLVIEPKFLDKFPNITKRLRRPAVALVSTDSTWIT 162

[Close]

BLAST of Carg11750 vs. TrEMBL
Match: tr|A0A1S3VH14|A0A1S3VH14_VIGRR (uncharacterized protein LOC106775053 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775053 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.0e-36
Identity = 94/171 (54.97%), Postives = 118/171 (69.01%), Query Frame = 0


Query: 1   MLGTVNLVMGSSTAAMLTS----TQCTAMKSLASFR---IGHHSHCRPLSLPSGLPSASG 60
           MLG   L +GSSTA +  +       T + S+   R   + + +H   +SL S    +  
Sbjct: 1   MLGMATLTLGSSTAMVAQNHAQQHHATTLASVNGHRRHSVSNRTHSSAMSLVSPTNKSFT 60

Query: 61  FSSCFFASRGSSPFNRAIAAV-NDQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFREL 120
           F S F  S  S PF  A+A+V +DQ+ SSD   + E+NKYYFVVANAKFMLDEEEHF+E 
Sbjct: 61  FLSSFKESASSRPFTTAVASVDSDQLNSSDPPTKNEANKYYFVVANAKFMLDEEEHFQEQ 120

Query: 121 LFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWI 164
           LFER+R + ER++EQDFWLVIEPKFL++FPNITKRL+RPAVALVSTN TWI
Sbjct: 121 LFERIRLFGERNQEQDFWLVIEPKFLDKFPNITKRLKRPAVALVSTNGTWI 171

[Close]

BLAST of Carg11750 vs. TrEMBL
Match: tr|V7BLT3|V7BLT3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G082200g PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-36
Identity = 92/167 (55.09%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 1   MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFR---IGHHSHCRPLSLPSGLPSASGFSSC 60
           MLG   L +GSST  +        + S    R   +   SH  P+SL S    +  F S 
Sbjct: 2   MLGMATLTLGSSTTMVAQQQHAATLASANGHRRHSVSSRSHSFPMSLVSPTHQSFTFLSS 61

Query: 61  FFASRGSSPFNRAIAAV-NDQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFER 120
           F     + PF  A+A+V +DQ+ SSD   + E+NKYYFVVANAKFMLDEEEHF+E LFER
Sbjct: 62  FKEPAHARPFTTAVASVDSDQLNSSDPPTKNEANKYYFVVANAKFMLDEEEHFQEQLFER 121

Query: 121 LRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWI 164
           LR + ER++EQDFWLVIEPKFL++FPNIT RL+RPAVALVSTN TWI
Sbjct: 122 LRLFGERNQEQDFWLVIEPKFLDKFPNITNRLKRPAVALVSTNGTWI 168

[Close]

BLAST of Carg11750 vs. TrEMBL
Match: tr|A0A0L9VCG0|A0A0L9VCG0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g141000 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.1e-36
Identity = 93/171 (54.39%), Postives = 118/171 (69.01%), Query Frame = 0


Query: 1   MLGTVNLVMGSSTAAMLTS----TQCTAMKSLASFR---IGHHSHCRPLSLPSGLPSASG 60
           MLG   L +GSSTA +  +       T + S    R   + + ++  P+SL S    +  
Sbjct: 1   MLGMATLTLGSSTAMVAQNHAQQHHATTLASANGHRRHSVSNRTYSSPMSLVSPTNKSFT 60

Query: 61  FSSCFFASRGSSPFNRAIAAV-NDQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFREL 120
           F S F  S  + PF  A+A+V +DQ+ SSD   + E+NKYYFVVANAKFMLDEEEHF+E 
Sbjct: 61  FLSSFKESPRARPFTTAVASVDSDQLNSSDPPTKNEANKYYFVVANAKFMLDEEEHFQEQ 120

Query: 121 LFERLRYYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWI 164
           LFER+R + ER++EQDFWLVIEPKFL++FPNITKRL+RPAVALVSTN TWI
Sbjct: 121 LFERIRLFGERNQEQDFWLVIEPKFLDKFPNITKRLKRPAVALVSTNGTWI 171

The following BLAST results are available for this feature:

BLAST of Carg11750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947359.1	4.1e-82	98.78	uncharacterized protein LOC111451246 [Cucurbita moschata]	[more]
XP_023007237.1	6.0e-73	91.46	uncharacterized protein LOC111499783 [Cucurbita maxima]	[more]
XP_022149576.1	3.6e-62	78.57	uncharacterized protein LOC111017973 [Momordica charantia]	[more]
XP_022944632.1	1.8e-61	79.76	uncharacterized protein LOC111449035 [Cucurbita moschata] >XP_023512536.1 unchar...	[more]
XP_022986936.1	4.0e-61	78.70	uncharacterized protein LOC111484525 [Cucurbita maxima]	[more]

BLAST of Carg11750 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58250.1	2.6e-30	52.20	unknown protein	[more]

BLAST of Carg11750 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P72777\|YC54L_SYNY3	3.5e-08	47.30	Ycf54-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]
sp\|P51204\|YCF54_PORPU	2.3e-07	41.56	Uncharacterized protein ycf54 OS=Porphyra purpurea OX=2787 GN=ycf54 PE=3 SV=1	[more]
sp\|Q1XDT3\|YCF54_PYRYE	9.6e-06	39.19	Uncharacterized protein ycf54 OS=Pyropia yezoensis OX=2788 GN=ycf54 PE=3 SV=1	[more]

BLAST of Carg11750 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KB63\|A0A0A0KB63_CUCSA	1.3e-52	71.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133820 PE=4 SV=1	[more]
tr\|A0A1S3C2E4\|A0A1S3C2E4_CUCME	6.6e-52	72.46	uncharacterized protein LOC103496259 OS=Cucumis melo OX=3656 GN=LOC103496259 PE=...	[more]
tr\|A0A1S3VH14\|A0A1S3VH14_VIGRR	1.0e-36	54.97	uncharacterized protein LOC106775053 OS=Vigna radiata var. radiata OX=3916 GN=LO...	[more]
tr\|V7BLT3\|V7BLT3_PHAVU	1.7e-36	55.09	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G082200g PE=4 ...	[more]
tr\|A0A0L9VCG0\|A0A0L9VCG0_PHAAN	5.1e-36	54.39	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g141000 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019616	Uncharacterised_Ycf54
IPR038409	Ycf54-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11750-RA	Carg11750-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038409	Ycf54-like superfamily	GENE3D	G3DSA:3.30.70.1860		coord: 87..164 e-value: 2.6E-28 score: 100.3
IPR019616	Uncharacterised protein family Ycf54	PFAM	PF10674	Ycf54	coord: 91..164 e-value: 2.4E-27 score: 95.0
IPR019616	Uncharacterised protein family Ycf54	PANTHER	PTHR35319	FAMILY NOT NAMED	coord: 12..164
None	No IPR available	PANTHER	PTHR35319:SF2	SUBFAMILY NOT NAMED	coord: 12..164

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11750	Silver-seed gourd	carcarB368
Carg11750	Silver-seed gourd	carcarB369
Carg11750	Cucumber (Gy14) v2	carcgybB1043
Carg11750	Cucumber (Gy14) v2	carcgybB1044
Carg11750	Cucumber (Gy14) v1	carcgyB1171
Carg11750	Cucumber (Gy14) v1	carcgyB1172
Carg11750	Cucurbita maxima (Rimu)	carcmaB1461
Carg11750	Cucurbita maxima (Rimu)	carcmaB1466
Carg11750	Cucurbita moschata (Rifu)	carcmoB1416
Carg11750	Cucurbita moschata (Rifu)	carcmoB1421
Carg11750	Cucurbita moschata (Rifu)	carcmoB1422
Carg11750	Cucurbita moschata (Rifu)	carcmoB1423
Carg11750	Cucurbita pepo (Zucchini)	carcpeB1473
Carg11750	Cucurbita pepo (Zucchini)	carcpeB1475
Carg11750	Cucurbita pepo (Zucchini)	carcpeB1476
Carg11750	Wild cucumber (PI 183967)	carcpiB1097
Carg11750	Wild cucumber (PI 183967)	carcpiB1099
Carg11750	Cucumber (Chinese Long) v2	carcuB1074
Carg11750	Cucumber (Chinese Long) v2	carcuB1076
Carg11750	Cucumber (Chinese Long) v3	carcucB1107
Carg11750	Cucumber (Chinese Long) v3	carcucB1108
Carg11750	Bottle gourd (USVL1VR-Ls)	carlsiB964
Carg11750	Bottle gourd (USVL1VR-Ls)	carlsiB966
Carg11750	Melon (DHL92) v3.5.1	carmeB1024
Carg11750	Melon (DHL92) v3.6.1	carmedB1040
Carg11750	Melon (DHL92) v3.6.1	carmedB1036
Carg11750	Watermelon (Charleston Gray)	carwcgB1027
Carg11750	Watermelon (Charleston Gray)	carwcgB1032
Carg11750	Watermelon (97103) v1	carwmB1057
Carg11750	Watermelon (97103) v1	carwmB1061
Carg11750	Watermelon (97103) v2	carwmbB1114
Carg11750	Watermelon (97103) v2	carwmbB1119
Carg11750	Wax gourd	carwgoB1243
Carg11750	Wax gourd	carwgoB1246