Carg11529 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11529
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Glutaredoxin family protein
Location	Cucurbita_argyrosperma_scaffold_083 : 461570 .. 464915 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTTCCTTCCAATTTCACCTCTCCTCCTCTAACTTCTCATCGCACTCTTTCCTTCTTCTTCAAAGCTTCTGTTTTATCCCTTCCCTTTTACAACGCCTGCGCTTCCAAATCCATTTCCATCTCAACAAAACACAATGGATCCACGAGGATCAGACCTATGTCGATTAGAGCTGTCTCCTCCTCCTCTTCTTCTTCTTCTTCCTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACTCAGAATCCTGTTGTTGTTTACTCCAAGACATGGTGTTCGTGAGTTCAAATCTCATCCATCTCATCTTTATATTTGTAATGCTTTTTTTCGATTTCCTTCGTGTTCTCTTTCCTTTTCCAGATTTGGGTTTCTTGAGTTTATTGGAAATATTTTGAAGCCGGATCGTTCGTTGGTAATCTCTTTTTTTAAGGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGCGCAGCCATTGGTCATTGAATTGGATGAATTAGGTACTTTTTCTTCTATTCTTATTACACTTGCTGGTAGATTTGCTCGAGGGGATCTGAGTACTGAAATCACTTTTTATTTTTCCCTCTATGACGATAACTGCCATTCCTGTCATATGTTCTTACTATTAACTTAAATTTTTGGATTAAGTTGTAAGTTAATTGTCGAGGATGGTTGGGAGAGAAGTCCTACGTTGGCTAACCAAAGGGAAGATCATGGGTTAGTAAGGAATACTATCTTCATTGGTACGAGATTCGTGGTTCCTGACATGGTATCATAGCATGCCCTTAACTTAGACATGTCAATAGAATCCTCAAGTTTCGACCAAAGAAGTTGTGAGCCTCGAAGGTGTAGTCAAAAGTGACTCAAGTATTGAACAAAGGGCGTACTTTGTTTCGAGGGCTCCAAAGAACGAGTCGAGCCTCGATGAAGGGGAGATTGTTTGGGGGCTATTGTTCGAGGGGAGGATTGTTGGGAGAGGAGTCCCACATTGACTAATTAAGGGGAAGATCATGAGTTTATAAGTAAGAAATACTAACTTCATTGGCATGAGGCCTTTTGGAAAAACCAAAAGCAAATCCATGAGAGCTTATGCTCAAAGTGGACAATATCATATCATTGTGAAAATTAGTGGTTCCTAACATTAATTTGATCTCAGACCTAGAGATACTCAATTTAAGCCGAATTCGACCCTTGTATGTTACTTTCTTCTGAAGTGATGATGTTAATAGTTCATGTGTTGGTTTGTATGAATCAAATTGATATCCTTGAGCTATTTGCTTTGATTTAAACCATCATGAGTCTTTCATTGAATTTAATGTCTTCTCTTGAATCTGTTTATGCATCTTGTAAGCTGACAAGTATTTTCCCTTCAGGTCCCCAAGGGCCACAACTGCAAAAGGTACTTGAGAGGCTTACAGGACAACATACGGTACCAAATGTTTTCATCGGTTAGTATTGCTTAATCACAATTATCAATCTTATGTATGTTGAAAATATTATCATTTTATGTTTACGTGGTTCTCTGTTTTAGTTATAAAACTTGCTGCTTTCACATTTTCATCGATTAACATTTGATACGTACAAAAACATTGCTTCTAATAGTGATTTTGTGTCGAATCTTCATTGAATACCTTTACTTATGATCCCGAACGTACCCCTTGGTTTGATATAACCATCTAGAAATAATAATGGTTGTCTATATGCTGAGAACCGAAGCATATATAGGGGTTTAGTTTTGGATTTTCGGTCTCAGTAAATAAGTAGAGCACAACGTGTTAGACCCTCGATCCGGGGACACGTGACTTGGCTCCATGTGTCTTACATGAGTCAAGATCTGATCATGTATGGGGTGGCACACTCAAAAGGATGGGTCCAAGGAAGGTGGCAACATTTACGCGTAGTAGGTGGTTGTCACTCTGACAATTGCACGAATGAATGCTGCTTGTTAAGAGACAAAGACACTTTAGTTTGAGTATTGTGTCTATGTCCATATCCATGCTTCTTAGTTTGTGTATACATACTTTGTTCTTAGACTGGAAGCAAGTGATTTTATATACAAGTTTGAAAATGGGATAGGAAGATCCTTTTTCCAACCTTTACTCATATTTTTTCGTGTTTATGAATGGATTGCTCGTACAATCCACAAGCATGCTTACTAATAGGGGAAGCGCCTCAGCTTCACATCATCCTCGCTATATATTTGTGAAGAACCTCAATGAACTAACTACTCACTGCTCGAGCTTACGTTAGTCGTAGAAACCGCTCACTACTATGTGCTAAGTTTCTTCCTTCCCTCCATGTCTTTCTTGTTTTAGGAGACGCTGGAGGTTTTTTGACCCACCACTGATTTAAACCACAAAACTCTAGCTTTGCCTGTAGAAAAGTTCCATGGATGAGTTGAAAATGCCTCGGACACCTCTTAGCGAACACCAAGTCTCTTTGTTTTAAATAGGTTATCCTGTATCAGCCGATCAATCAACAAAGATTTGAACAATGACTGACTCGTTTTTTAGCCTACGAAAGGAAATTTTATTAGAACATATAACAAATGCATGTACTATCCACGTAGATAGAAATCCCCCCTCCCCCCCCCCCCCCCCCGTGTTTAAAAATACTGCCCCTTTGTGTTGTTTCGAATAACGACTACCGTTCTATTTCATGGAGTCTCGTCATCTAAAGATTTTTCCCCAAATCATATTCTTGTGCGCGTACCGAGTATTGTTTAAATTCACATACCTCTTTCTGTGGCCAGGGGGCAAGCACATAGGCGGTTGTACAGGTACTTTTTTTTTTTTTTTTACCAAGATTTCATTCAATGGAAACATACATTGCTTGATTCACTTATATTGATTATCGATGTCGCTTGTGCTCGCCGTGATGATGCAGATACTGTGAAACTATACCGAAAAGGAGAGCTCGAGCCTTTGCTATCTGAAGCGAATGCTAAAAATACAGAGACATAAGGCACTAGGCACATTTTGTTTTCTTAGCCATTTGGTGACTGACCTGTTGATTTTCTTAATTCTACCTCGAGTGATACTTGCGTTTCTTGTTAGGAACATGTATTTTAAGATATTTGTGGATGCATTTGTTTCAAGGAAGGATCTCCAGTTTATGCATGAAATAAGAGAGCATTTTATTCCCATTTGGAAAGAAAAGCCTTCCATTTCCGTCAAATGACCTGGCCTCCCTTGCCCGGTTTACGGTCCAGGCTCTCTTTCCTGTCTATGCTATGCTCCTATGGCGCAGGCTTACCACGTTCCGCGCCTGCAACGTTTTTGCCTGGTTTACCGTCCAAGCTCCCCTTCCCGTCTATGCTATGCTCCTATGGCG

mRNA sequence

ATGGCAGTTCCTTCCAATTTCACCTCTCCTCCTCTAACTTCTCATCGCACTCTTTCCTTCTTCTTCAAAGCTTCTGTTTTATCCCTTCCCTTTTACAACGCCTGCGCTTCCAAATCCATTTCCATCTCAACAAAACACAATGGATCCACGAGGATCAGACCTATGTCGATTAGAGCTGTCTCCTCCTCCTCTTCTTCTTCTTCTTCCTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACTCAGAATCCTGTTGTTGTTTACTCCAAGACATGGTGTTCGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGCGCAGCCATTGGTCATTGAATTGGATGAATTAGGTCCCCAAGGGCCACAACTGCAAAAGGTACTTGAGAGGCTTACAGGACAACATACGGTACCAAATGTTTTCATCGGGGGCAAGCACATAGGCGGTTGTACAGATACTGTGAAACTATACCGAAAAGGAGAGCTCGAGCCTTTGCTATCTGAAGCGAATGCTAAAAATACAGAGACATAAGGCACTAGGCACATTTTGTTTTCTTAGCCATTTGGTGACTGACCTGTTGATTTTCTTAATTCTACCTCGAGTGATACTTGCGTTTCTTGTTAGGAACATGTATTTTAAGATATTTGTGGATGCATTTGTTTCAAGGAAGGATCTCCAGTTTATGCATGAAATAAGAGAGCATTTTATTCCCATTTGGAAAGAAAAGCCTTCCATTTCCGTCAAATGACCTGGCCTCCCTTGCCCGGTTTACGGTCCAGGCTCTCTTTCCTGTCTATGCTATGCTCCTATGGCGCAGGCTTACCACGTTCCGCGCCTGCAACGTTTTTGCCTGGTTTACCGTCCAAGCTCCCCTTCCCGTCTATGCTATGCTCCTATGGCG

Coding sequence (CDS)

ATGGCAGTTCCTTCCAATTTCACCTCTCCTCCTCTAACTTCTCATCGCACTCTTTCCTTCTTCTTCAAAGCTTCTGTTTTATCCCTTCCCTTTTACAACGCCTGCGCTTCCAAATCCATTTCCATCTCAACAAAACACAATGGATCCACGAGGATCAGACCTATGTCGATTAGAGCTGTCTCCTCCTCCTCTTCTTCTTCTTCTTCCTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACTCAGAATCCTGTTGTTGTTTACTCCAAGACATGGTGTTCGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGCGCAGCCATTGGTCATTGAATTGGATGAATTAGGTCCCCAAGGGCCACAACTGCAAAAGGTACTTGAGAGGCTTACAGGACAACATACGGTACCAAATGTTTTCATCGGGGGCAAGCACATAGGCGGTTGTACAGATACTGTGAAACTATACCGAAAAGGAGAGCTCGAGCCTTTGCTATCTGAAGCGAATGCTAAAAATACAGAGACATAA

Protein sequence

MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET

Homology

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BLAST of Carg11529 vs. NCBI nr
Match: XP_022954295.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 329.7 bits (844), Expect = 6.1e-87
Identity = 177/180 (98.33%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAV 60
           MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAV
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAV 60

Query: 61  -SXXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDE 120
             XXXXXXXX GSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDE
Sbjct: 61  XXXXXXXXXXXGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDE 120

Query: 121 LGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180
           LGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET
Sbjct: 121 LGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180

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BLAST of Carg11529 vs. NCBI nr
Match: XP_023549357.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.6 bits (836), Expect = 5.2e-86
Identity = 178/183 (97.27%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKH----NGSTRIRPMS 60
           MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISIS KH    NGSTRIRPMS
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISIS-KHNALNNGSTRIRPMS 60

Query: 61  IRAVSXXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE 120
           IRAVSXXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE
Sbjct: 61  IRAVSXXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE 120

Query: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN 180
           LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN
Sbjct: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN 180

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BLAST of Carg11529 vs. NCBI nr
Match: XP_022991298.1 (monothiol glutaredoxin-S10-like [Cucurbita maxima])

HSP 1 Score: 306.2 bits (783), Expect = 7.2e-80
Identity = 163/183 (89.07%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKH----NGSTRIRPMS 60
           MAVPSNFTSPPLT HRTLS  FK  VLSLPFYNACASKSISIS KH    NGS RIRPMS
Sbjct: 1   MAVPSNFTSPPLTPHRTLSSSFKPPVLSLPFYNACASKSISIS-KHNALKNGSARIRPMS 60

Query: 61  IRAVSXXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE 120
           IRA S        FGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE
Sbjct: 61  IRASS-------SFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE 120

Query: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN 180
           LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN
Sbjct: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN 175

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BLAST of Carg11529 vs. NCBI nr
Match: XP_022157516.1 (monothiol glutaredoxin-S10-like isoform X1 [Momordica charantia])

HSP 1 Score: 276.9 bits (707), Expect = 4.7e-71
Identity = 146/181 (80.66%), Postives = 158/181 (87.29%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKH--NGSTRIRPMSIR 60
           MAV SNFTSP LTS RTLSFFFKASV SLPF+N+C  KS SIST +  NGS+R + +SI+
Sbjct: 1   MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK 60

Query: 61  AVSXXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELD 120
           AVS        FGSRLEESVK TI+QNPVVVYSKTWCSYSS+VKALFKRLG QPLVIELD
Sbjct: 61  AVS----SSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELD 120

Query: 121 ELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTE 180
           ELG QGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDT+KL+RKGELEPLLSEANAKN+E
Sbjct: 121 ELGLQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTMKLHRKGELEPLLSEANAKNSE 177

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BLAST of Carg11529 vs. NCBI nr
Match: XP_004140671.2 (PREDICTED: glutaredoxin-C5, chloroplastic-like [Cucumis sativus] >KGN46358.1 hypothetical protein Csa_6G087860 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 6.1e-71
Identity = 157/185 (84.86%), Postives = 160/185 (86.49%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHN---GSTRIRPMSI 60
           MAVPSNFTS P  S R LSFFFKASV  LPFYN+C SKSISIS KHN   G TR RPMSI
Sbjct: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISIS-KHNAFTGFTRTRPMSI 70

Query: 61  ---RAVSXXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120
                  XXXXXXXX  SRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 71  XXXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130

Query: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 180
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEP+LSEANA
Sbjct: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANA 190

[Close]

BLAST of Carg11529 vs. TAIR10
Match: AT4G28730.1 (Glutaredoxin family protein)

HSP 1 Score: 181.4 bits (459), Expect = 4.9e-46
Identity = 82/107 (76.64%), Postives = 97/107 (90.65%), Query Frame = 0


Query: 73  RLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLE 132
           R+EES++ T+T+N VV+YSKTWCSY +EVK LFKRLG QPLV+ELD+LGPQGPQLQKVLE
Sbjct: 68  RMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLE 127

Query: 133 RLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180
           RLTGQHTVPNVF+ GKHIGGCTDTVKL RKG+LE +L+EAN KN ++
Sbjct: 128 RLTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEANGKNGQS 174

[Close]

BLAST of Carg11529 vs. TAIR10
Match: AT2G20270.2 (Thioredoxin superfamily protein)

HSP 1 Score: 152.9 bits (385), Expect = 1.9e-37
Identity = 95/205 (46.34%), Postives = 126/205 (61.46%), Query Frame = 0


Query: 5   SNFTSPPLTSHRTLSFFFKASVLS---LPFYNACASKSISISTKHNGSTRIRPMSIRAVS 64
           +N T   L S+  +SF   + + +   LPF        I I++       +R  S++A+S
Sbjct: 9   ANMTWTSLNSNPAISFSMLSGIRNLGMLPFRRCLKPTVIGIAS----WPPLRCSSVKAMS 68

Query: 65  XXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDEL- 124
              XXXXX     EE+VKTT+ +NPVVVYSKTWCSYSS+VK+LFK L  +PLV+ELD+L 
Sbjct: 69  ---XXXXXXXXXXEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLV 128

Query: 125 --------------------------GPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCT 180
                                     G +G QLQ VLE++TGQ+TVPNVFIGGKHIGGC+
Sbjct: 129 SLGKTSLPHDIGLKHLQKFWWFLAFPGSEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCS 188

[Close]

BLAST of Carg11529 vs. TAIR10
Match: AT5G63030.1 (Thioredoxin superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 2.1e-20
Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 79  KTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQH 138
           K  ++  PVVV+SKT+C Y   VK L  +LGA   V+ELDE+   G ++Q  L   TGQ 
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMS-DGGEIQSALSEWTGQT 82

Query: 139 TVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 175
           TVPNVFI G HIGGC   ++  ++G+L PLL+EA A
Sbjct: 83  TVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGA 117

[Close]

BLAST of Carg11529 vs. TAIR10
Match: AT5G20500.1 (Glutaredoxin family protein)

HSP 1 Score: 90.9 bits (224), Expect = 8.6e-19
Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 78  VKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQ 137
           VK TI+ + +V++SK++C Y  + K++F+ L   P V+ELDE    G  +Q  L  + G+
Sbjct: 35  VKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDE-REDGWSIQTALGEIVGR 94

Query: 138 HTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTE 179
            TVP VFI GKH+GG  DTV  Y  GEL  LL  +  K  E
Sbjct: 95  RTVPQVFINGKHLGGSDDTVDAYESGELAKLLGVSGNKEAE 134

[Close]

BLAST of Carg11529 vs. TAIR10
Match: AT5G40370.2 (Glutaredoxin family protein)

HSP 1 Score: 88.6 bits (218), Expect = 4.3e-18
Identity = 45/86 (52.33%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 89  VYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIGGK 148
           + SKT+C Y   VK L ++LGA+   +ELD     G Q+Q  L   TGQ TVPNVFIGG 
Sbjct: 42  ICSKTYCPYCVRVKELLQQLGAKFKAVELD-TESDGSQIQSGLAEWTGQRTVPNVFIGGN 101

Query: 149 HIGGCTDTVKLYRKGELEPLLSEANA 175
           HIGGC  T  L++ G+L PLL+EA A
Sbjct: 102 HIGGCDATSNLHKDGKLVPLLTEAGA 126

[Close]

BLAST of Carg11529 vs. Swiss-Prot
Match: sp|Q8GWS0|GRXC5_ARATH (Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 8.8e-45
Identity = 82/107 (76.64%), Postives = 97/107 (90.65%), Query Frame = 0


Query: 73  RLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLE 132
           R+EES++ T+T+N VV+YSKTWCSY +EVK LFKRLG QPLV+ELD+LGPQGPQLQKVLE
Sbjct: 68  RMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLE 127

Query: 133 RLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180
           RLTGQHTVPNVF+ GKHIGGCTDTVKL RKG+LE +L+EAN KN ++
Sbjct: 128 RLTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEANGKNGQS 174

[Close]

BLAST of Carg11529 vs. Swiss-Prot
Match: sp|Q0J3L4|GRS10_ORYSJ (Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE=2 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 7.4e-44
Identity = 88/121 (72.73%), Postives = 99/121 (81.82%), Query Frame = 0


Query: 51  RIRPMSIRAVSXXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGA 110
           R R ++ RA S        FGSR+E+SVK T+  NPVV+YSK+WCSYS EVKALFKR+G 
Sbjct: 38  RARSLATRASS--SSPDSSFGSRMEDSVKRTLADNPVVIYSKSWCSYSMEVKALFKRIGV 97

Query: 111 QPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLS 170
           QP VIELD+LG QGPQLQKVLERLTGQ TVPNVFIGGKHIGGCTDTVKL+RKGEL  +LS
Sbjct: 98  QPHVIELDQLGAQGPQLQKVLERLTGQSTVPNVFIGGKHIGGCTDTVKLHRKGELATMLS 156

Query: 171 E 172
           E
Sbjct: 158 E 156

[Close]

BLAST of Carg11529 vs. Swiss-Prot
Match: sp|Q8LBS4|GRS12_ARATH (Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS12 PE=1 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 1.3e-40
Identity = 95/178 (53.37%), Postives = 126/178 (70.79%), Query Frame = 0


Query: 5   SNFTSPPLTSHRTLSFFFKASVLS---LPFYNACASKSISISTKHNGSTRIRPMSIRAVS 64
           +N T   L S+  +SF   + + +   LPF        I I++       +R  S++A+S
Sbjct: 9   ANMTWTSLNSNPAISFSMLSGIRNLGMLPFRRCLKPTVIGIAS----WPPLRCSSVKAMS 68

Query: 65  XXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELG 124
              XXXXX     EE+VKTT+ +NPVVVYSKTWCSYSS+VK+LFK L  +PLV+ELD+LG
Sbjct: 69  ---XXXXXXXXXXEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLG 128

Query: 125 PQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180
            +G QLQ VLE++TGQ+TVPNVFIGGKHIGGC+DT++L+ KGELE +L+EAN KN +T
Sbjct: 129 SEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAILAEANGKNGQT 179

[Close]

BLAST of Carg11529 vs. Swiss-Prot
Match: sp|O81187|GLRX_VERFO (Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.0e-21
Identity = 52/93 (55.91%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 82  ITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQHTVP 141
           ++ N VVV+SKT+C Y + VK L  +LGAQ  VIELD     G  LQ  L   TGQ TVP
Sbjct: 10  VSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDS-ESDGSDLQNALAEWTGQRTVP 69

Query: 142 NVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 175
           NVFIGGKHIGGC  T  ++++G+L PLL+EA A
Sbjct: 70  NVFIGGKHIGGCDKTTGMHQEGKLIPLLTEAGA 101

[Close]

BLAST of Carg11529 vs. Swiss-Prot
Match: sp|P55142|GRXC6_ORYSJ (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 3.0e-21
Identity = 53/96 (55.21%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 79  KTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQH 138
           K T+   PVVVYSK++C +   VK LF++LGA    IELD     G +LQ  L   TGQ 
Sbjct: 7   KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDG-ESDGSELQSALAEWTGQR 66

Query: 139 TVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 175
           TVPNVFI GKHIGGC DT+ L  +G+L PLL+EA A
Sbjct: 67  TVPNVFINGKHIGGCDDTLALNNEGKLVPLLTEAGA 101

[Close]

BLAST of Carg11529 vs. TrEMBL
Match: tr|A0A0A0KA52|A0A0A0KA52_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087860 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 4.1e-71
Identity = 157/185 (84.86%), Postives = 160/185 (86.49%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHN---GSTRIRPMSI 60
           MAVPSNFTS P  S R LSFFFKASV  LPFYN+C SKSISIS KHN   G TR RPMSI
Sbjct: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISIS-KHNAFTGFTRTRPMSI 70

Query: 61  ---RAVSXXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120
                  XXXXXXXX  SRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 71  XXXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130

Query: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 180
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEP+LSEANA
Sbjct: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANA 190

[Close]

BLAST of Carg11529 vs. TrEMBL
Match: tr|A0A1S3CB05|A0A1S3CB05_CUCME (glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 5.5e-68
Identity = 152/184 (82.61%), Postives = 156/184 (84.78%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKH---NGSTR---IRP 60
           MAVPSNFTS P  S R LSFFFKASV SLPFYN+C SKSISIS KH   NG TR      
Sbjct: 11  MAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISIS-KHNSLNGFTRTXXXXX 70

Query: 61  MSIRAVSXXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120
                  XXXXXXXX  SRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLG QPLV
Sbjct: 71  XXXXXXXXXXXXXXXXXSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLV 130

Query: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 179
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEP+LSEANA
Sbjct: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANA 190

[Close]

BLAST of Carg11529 vs. TrEMBL
Match: tr|A0A2I4H1F2|A0A2I4H1F2_9ROSI (monothiol glutaredoxin-S10-like OS=Juglans regia OX=51240 GN=LOC109012665 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.0e-57
Identity = 126/179 (70.39%), Postives = 140/179 (78.21%), Query Frame = 0


Query: 1   MAVPS---NFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISIST-KHNGSTRIRPMS 60
           MAV S   NFTS  L S RT S   K SV S+PF N    ++ SIS+   NGS   RP S
Sbjct: 1   MAVASNLTNFTSLVLNSPRTFSPISKPSVCSIPFNNTRGLRTNSISSFATNGSRTHRPFS 60

Query: 61  IRAVSXXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE 120
           ++A++        FGSRLE+SVK T+T+NPVVVYSKTWCSYSSEVK+LFKRLG QP VIE
Sbjct: 61  VQAMA------SSFGSRLEDSVKKTVTENPVVVYSKTWCSYSSEVKSLFKRLGVQPFVIE 120

Query: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAK 176
           LDELGPQGPQ+QKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYR+GELEPLLSEA AK
Sbjct: 121 LDELGPQGPQVQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRQGELEPLLSEAKAK 173

[Close]

BLAST of Carg11529 vs. TrEMBL
Match: tr|M5W045|M5W045_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G210900 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 4.4e-57
Identity = 123/178 (69.10%), Postives = 140/178 (78.65%), Query Frame = 0


Query: 5   SNFTSPPLTSHRTLSFFFKASVLSLPFYNACA---SKSISISTKHNGSTRIRPMSIRAVS 64
           +NFTS  L S R LS   K+S+ S P  N C+   S SIS+ +  NGS R R  S++A++
Sbjct: 8   TNFTSVSLNSARILSSTNKSSICSAPLSNNCSPRGSSSISLFS-INGSRRWRSFSVKAMA 67

Query: 65  XXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELG 124
                   FGSRLEESVK T+ +NPVVVYSKTWCSYSSEVK+LFKRLG +P+VIELDELG
Sbjct: 68  ------SSFGSRLEESVKKTVDENPVVVYSKTWCSYSSEVKSLFKRLGVEPMVIELDELG 127

Query: 125 PQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180
           PQGPQLQKVLERLTGQHTVPNVFI GKHIGGCTDTVKLYRKGELEPLLSEA AKN ++
Sbjct: 128 PQGPQLQKVLERLTGQHTVPNVFIAGKHIGGCTDTVKLYRKGELEPLLSEAKAKNAQS 178

[Close]

BLAST of Carg11529 vs. TrEMBL
Match: tr|A0A1Q3B753|A0A1Q3B753_CEPFO (Glutaredoxin domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07379 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 9.1e-55
Identity = 119/181 (65.75%), Postives = 140/181 (77.35%), Query Frame = 0


Query: 1   MAVPSNFT--SPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIR 60
           MAV S+    +  L S+  L      S+  +PF N  +S S S S  ++GS+R RP+S++
Sbjct: 1   MAVTSHVVNLTHSLKSNPILPSLHNFSICHVPFNNITSSSS-SFSGFNHGSSRYRPISVQ 60

Query: 61  AVSXXXXXXXXFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELD 120
           A+S        FGSRLE+SVK T+ +NPVVVYSKTWCSYSSEVK+LFK+LG QPLVIELD
Sbjct: 61  AMS---PYSSSFGSRLEDSVKKTVEENPVVVYSKTWCSYSSEVKSLFKKLGVQPLVIELD 120

Query: 121 ELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTE 180
           ELGPQGPQ+QKVLERLTGQHTVPNVFIGG HIGGCTDT+KLYRKGELEPLLS ANAKN E
Sbjct: 121 ELGPQGPQVQKVLERLTGQHTVPNVFIGGNHIGGCTDTLKLYRKGELEPLLSGANAKNIE 177

The following BLAST results are available for this feature:

BLAST of Carg11529 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954295.1	6.1e-87	98.33	glutaredoxin-C5, chloroplastic-like [Cucurbita moschata]	[more]
XP_023549357.1	5.2e-86	97.27	glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022991298.1	7.2e-80	89.07	monothiol glutaredoxin-S10-like [Cucurbita maxima]	[more]
XP_022157516.1	4.7e-71	80.66	monothiol glutaredoxin-S10-like isoform X1 [Momordica charantia]	[more]
XP_004140671.2	6.1e-71	84.86	PREDICTED: glutaredoxin-C5, chloroplastic-like [Cucumis sativus] >KGN46358.1 hyp...	[more]

BLAST of Carg11529 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28730.1	4.9e-46	76.64	Glutaredoxin family protein	[more]
AT2G20270.2	1.9e-37	46.34	Thioredoxin superfamily protein	[more]
AT5G63030.1	2.1e-20	50.00	Thioredoxin superfamily protein	[more]
AT5G20500.1	8.6e-19	43.56	Glutaredoxin family protein	[more]
AT5G40370.2	4.3e-18	52.33	Glutaredoxin family protein	[more]

BLAST of Carg11529 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GWS0\|GRXC5_ARATH	8.8e-45	76.64	Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=...	[more]
sp\|Q0J3L4\|GRS10_ORYSJ	7.4e-44	72.73	Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE...	[more]
sp\|Q8LBS4\|GRS12_ARATH	1.3e-40	53.37	Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRX...	[more]
sp\|O81187\|GLRX_VERFO	3.0e-21	55.91	Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1	[more]
sp\|P55142\|GRXC6_ORYSJ	3.0e-21	55.21	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2	[more]

BLAST of Carg11529 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KA52\|A0A0A0KA52_CUCSA	4.1e-71	84.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087860 PE=4 SV=1	[more]
tr\|A0A1S3CB05\|A0A1S3CB05_CUCME	5.5e-68	82.61	glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=4 SV=1	[more]
tr\|A0A2I4H1F2\|A0A2I4H1F2_9ROSI	2.0e-57	70.39	monothiol glutaredoxin-S10-like OS=Juglans regia OX=51240 GN=LOC109012665 PE=4 S...	[more]
tr\|M5W045\|M5W045_PRUPE	4.4e-57	69.10	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G210900 PE=4 SV=1	[more]
tr\|A0A1Q3B753\|A0A1Q3B753_CEPFO	9.1e-55	65.75	Glutaredoxin domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFO...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR011899	Glutaredoxin_euk/vir
IPR002109	Glutaredoxin
IPR014025	Glutaredoxin_subgr

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11529-RA	Carg11529-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 133..146 score: 57.14 coord: 87..105 score: 36.18 coord: 147..160 score: 47.62
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 67..179 e-value: 7.1E-40 score: 137.2
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 33..177
None	No IPR available	PANTHER	PTHR10168:SF14	GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED	coord: 33..177
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 86..168 e-value: 7.0036E-42 score: 136.516
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 87..150 e-value: 1.4E-15 score: 57.1
IPR002109	Glutaredoxin	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 75..176 score: 24.226
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 87..168 e-value: 5.0E-27 score: 91.9
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 75..173

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11529	Csa6G087860	Cucumber (Chinese Long) v2	carcuB0012
Carg11529	MELO3C022405	Melon (DHL92) v3.5.1	carmeB0010
Carg11529	ClCG06G001290	Watermelon (Charleston Gray)	carwcgB0013
Carg11529	CSPI06G06870	Wild cucumber (PI 183967)	carcpiB0012
Carg11529	Cucsa.348740	Cucumber (Gy14) v1	carcgyB0012
Carg11529	Lsi09G018100	Bottle gourd (USVL1VR-Ls)	carlsiB011
Carg11529	Cp4.1LG12g10290	Cucurbita pepo (Zucchini)	carcpeB0018
Carg11529	CsGy6G006880	Cucumber (Gy14) v2	carcgybB0011
Carg11529	MELO3C022405.2	Melon (DHL92) v3.6.1	carmedB0011
Carg11529	CsaV3_6G007220	Cucumber (Chinese Long) v3	carcucB0012
Carg11529	Cla97C06G110560	Watermelon (97103) v2	carwmbB0011

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11529	Silver-seed gourd	carcarB011
Carg11529	Cucurbita maxima (Rimu)	carcmaB0020
Carg11529	Cucurbita maxima (Rimu)	carcmaB0023
Carg11529	Cucurbita moschata (Rifu)	carcmoB0021
Carg11529	Cucurbita moschata (Rifu)	carcmoB0024
Carg11529	Cucurbita pepo (Zucchini)	carcpeB0022