Carg11427 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11427
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Profilin
Location	Cucurbita_argyrosperma_scaffold_025 : 984193 .. 987041 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTTCAGCCATTTACGACTCGCGAGATCTTTGCCAGAGCTCACTGGTTCATTTCCATGGTAGCTTAGACGCCTAGTAGGTTTCGCTTAAATGGATTGGGCATTCGTCCGCAAAGCTTGGGACAAATGGGCTTCCGGCAGCATTGGCACCTTCGGTAACCAACACCGTCCGCCATTTTCAATTCGTATAGAATATCGATGTTCTCAAATGCGATTTTAATGGATGTTTGTTTGTTTGTCGTAGGTCAGCCATTGAAAGCTGCTCTGTTGATCAATTATGATCCTACTGGACCTTCCCGTTTGCTTTCGACCATGTAAGCACTCTTCATTTCCGATTTGACTGTACTCATTACTTTCAATTTTCTGTTTTCGTTCTTGTATAGGGTTCTTGGCGATTGCAAAATCTTTTGTTTTCTGAGATTAAACAATTTTCAAATTCAATAAGCATATTTCGTAATGAATTGTTTTTATCTCCAAGTAGTTCATCTTTTCCTAATTTTTACTTATTATGCTAATTCTACTGTCTTTCATAATTTTACAAGTTCTAATCGCGTAGTTCTAAGTCCATATTTGGGATTAGGGTTAGGGTTGGAACTAGCTCAAACTGTTAGGGATTTGGTTGTGCTATAACTTCCAGTTTGATAATTCTAGAAGTTAATTTGTCCCAGTTTTTTTCTAGTTCAATCTCTGTCTTTGAAACATGAATCTTCTGGCTGTGGTTCTTCTCTGTATTTTCATTTAAACCTGTTTTGGAAGCTCTAAGAGCTTGTTTGGTGTTTGGCCTTCAGTGCAGAACAAGAAGGAATATTGCTTAATCCTATAGAACTGAATCAGTTTATCGATTTCATCAAACGTGACAAACCCCAAAATGAGAGTTTCAGCATCGGCTCAAATCAATGTAAGTGTTCTTTTGTGCTTTTCGTTCATTTCTTCTGTTAAACATTTTGTTTTCTTGAATTGATGTCAATATTCAAACATTATTGTTTAACGCTACATTATTATGTGTGTAAAGTGAGAGTTAATTTAAGATTAGTTAAGGTATCATGTTAGTTATTGTCCGTAAGATCCACATCGGTTGGAGAGGGGAACGGAGCATTCCTTGTAAGGGTGTGGAAGCCTCTCCAACCTTGAGGAGAAGTTCAGAAGGGAAAGTCCAAAGGAGACAATATTTGCTAATGGTGGGCTTGAGCTATTATACCAAAGCCAGACATCAAGCAGTGTGCCAGCGAGGACACTGCACCCTGAAGGGAGTGGATTGTGAGATCCCATATCGGTTGGAGAGGAGAACGAAACATACCTTATAAGGGTGTGGAAACCTCTTTCTAGCAGATGCGTTTTAAAACCTTGAAGGGAAGCCCAAAAGAGAAAGCCCAAGGAAGACAATATCCGCAGGCAGTGGGATTGAGCTATTACATTGTCATCCTTGAAAAACGGTCATAGGCTCATGTGTATGAAGATGTATATACTTTTTCCTGTGCTTAGACCCACCCAAATTTAGCAGCCCGAAAATAGGGGAGAACCCAAACAAAGGCGTCGGAGGCCTCAAAATCATCCGGAGTTGTGGAAAAAAGAAAGTAGAGCAATACTTTTATTTTAAATTACGAGGGCAGGATAAGATATTATCTGTTGAGCCAAAAGGAATTGCAAAAAGTGAAAAAAGAAAAAACTTCGCAGTGAGTTTGAATAACAGAAGAACAATGCTTTTCCGGAACATTTCTGATTTCAACTAGGCTTTTCTGTCTTTACCTTTGAAGTTGGGGCGACTGCTTTTAAGATAATATTCTCATCTTCATACCATCAATCAATGAAATTGTTTCTTTATAATATGCATGTAATATTCTCATATAATAGCAACCACAGAATGCACCTGGCAATATTTGGAATTGTTTGTCTGCAACTCATGCTGGATTATAGGTTGGTTTTTATACGCACGAATCTAACCTTAATAGAACTTTATTTCAGACATAATGACATCAGTCCATGAGAATTGGTTTTGTGCAAGGTGCATGAACACTATAAAGCATGCTGGTGAAGGCGTTGTTATAGTGCAAACAACAGCCTTTATTTTGGTTGCTATGTAAGTATAGTTTACTGCTAAAAACTGCTTTGTTTTTCCCACTTATCCAAAAATTTCTTGCATTGGTAGAGACTCGATAAAGTTCAAAGAACAGAAGATTCTCGTTTATGTGTGTTTTTTTTTTTTTTTTTTCTAAAAAAGAAGTCCTCTTAAATCCTTACAGGTATGATGGTTCGATTGCAGCAGCATCTCGCGCTATGGCGTCTGCCGATCAGTTATCTTGGCAGTTAGGCAGGAAAAATCTTTAGTTGCCTTGAAGTAAAACCTTGTATGAACTGATGTAGAATTGCACTAGAGTAATGAATATATTTTTAAGCTTTGGACCTCGGTTTTGACTGTTATGAAACTATAGAAATACTATCTATTACTTGGGATTTGGAGCATATACGGTAGGTATTTGGTAAAGATTTGGTAGAGATATATTTAGTAGATTATATCTGGTAGGTTAAATATGTATTTAGTAAACTGAAATTATATATATCTCATTAGACCGTCTTCATTTTCTGTATTCTTTTTGAACTTTCTCTCACCTATTCTTTGTATTTATCTTGATCGAGTGTGTGCGTTGTGCGATCCTAACACATTTTTCAAATGGTAAACAGGCTCAAGGTTCTGGAATCTGTTGATGACTATATCATGCTTTCTGTTTTGGGCTTTGAATTTTGTTGAATGTGATTTCAATTTTTTTTTCTGGCATTTATATTATATAATATGATCTTTTGTTCTATACGCCATCTTCCTAAGTTGCTGTGGTTGCTGCGTCTTAATTTG

mRNA sequence

AAATTTTCAGCCATTTACGACTCGCGAGATCTTTGCCAGAGCTCACTGGTTCATTTCCATGGTAGCTTAGACGCCTAGTAGGTTTCGCTTAAATGGATTGGGCATTCGTCCGCAAAGCTTGGGACAAATGGGCTTCCGGCAGCATTGGCACCTTCGGTCAGCCATTGAAAGCTGCTCTGTTGATCAATTATGATCCTACTGGACCTTCCCGTTTGCTTTCGACCATTGCAGAACAAGAAGGAATATTGCTTAATCCTATAGAACTGAATCAGTTTATCGATTTCATCAAACGTGACAAACCCCAAAATGAGAGTTTCAGCATCGGCTCAAATCAATACATAATGACATCAGTCCATGAGAATTGGTTTTGTGCAAGGTGCATGAACACTATAAAGCATGCTGGTGAAGGCGTTGTTATAGTGCAAACAACAGCCTTTATTTTGGTTGCTATGTATGATGGTTCGATTGCAGCAGCATCTCGCGCTATGGCGTCTGCCGATCAGTTATCTTGGCAGTTAGGCAGGAAAAATCTTTAGTTGCCTTGAAGTAAAACCTTGTATGAACTGATGTAGAATTGCACTAGAGTAATGAATATATTTTTAAGCTTTGGACCTCGGTTTTGACTGTTATGAAACTATAGAAATACTATCTATTACTTGGGATTTGGAGCATATACGGTAGGTATTTGGTAAAGATTTGGTAGAGATATATTTAGTAGATTATATCTGGTAGGTTAAATATGTATTTAGTAAACTGAAATTATATATATCTCATTAGACCGTCTTCATTTTCTGTATTCTTTTTGAACTTTCTCTCACCTATTCTTTGTATTTATCTTGATCGAGTGTGTGCGTTGTGCGATCCTAACACATTTTTCAAATGGTAAACAGGCTCAAGGTTCTGGAATCTGTTGATGACTATATCATGCTTTCTGTTTTGGGCTTTGAATTTTGTTGAATGTGATTTCAATTTTTTTTTCTGGCATTTATATTATATAATATGATCTTTTGTTCTATACGCCATCTTCCTAAGTTGCTGTGGTTGCTGCGTCTTAATTTG

Coding sequence (CDS)

ATGGATTGGGCATTCGTCCGCAAAGCTTGGGACAAATGGGCTTCCGGCAGCATTGGCACCTTCGGTCAGCCATTGAAAGCTGCTCTGTTGATCAATTATGATCCTACTGGACCTTCCCGTTTGCTTTCGACCATTGCAGAACAAGAAGGAATATTGCTTAATCCTATAGAACTGAATCAGTTTATCGATTTCATCAAACGTGACAAACCCCAAAATGAGAGTTTCAGCATCGGCTCAAATCAATACATAATGACATCAGTCCATGAGAATTGGTTTTGTGCAAGGTGCATGAACACTATAAAGCATGCTGGTGAAGGCGTTGTTATAGTGCAAACAACAGCCTTTATTTTGGTTGCTATGTATGATGGTTCGATTGCAGCAGCATCTCGCGCTATGGCGTCTGCCGATCAGTTATCTTGGCAGTTAGGCAGGAAAAATCTTTAG

Protein sequence

MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL

Homology

[Close]

BLAST of Carg11427 vs. NCBI nr
Match: XP_008451862.1 (PREDICTED: uncharacterized protein LOC103493024 [Cucumis melo])

HSP 1 Score: 289.3 bits (739), Expect = 7.5e-75
Identity = 139/147 (94.56%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ 60
           MDWAFV KAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ
Sbjct: 1   MDWAFVHKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ 60

Query: 61  FIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAM 120
           F+DFIKRDKPQNESFSIG NQYIMTSVHENWFCARCMNTIKHAGEGV+IVQTTAFIL+AM
Sbjct: 61  FVDFIKRDKPQNESFSIGLNQYIMTSVHENWFCARCMNTIKHAGEGVIIVQTTAFILIAM 120

Query: 121 YDGSIAAASRAMASADQLSWQLGRKNL 148
           YDGSIAAASRAMA+ADQLSW L RKNL
Sbjct: 121 YDGSIAAASRAMAAADQLSWVLARKNL 147

[Close]

BLAST of Carg11427 vs. NCBI nr
Match: XP_022136632.1 (uncharacterized protein LOC111008291 [Momordica charantia])

HSP 1 Score: 288.1 bits (736), Expect = 1.7e-74
Identity = 139/147 (94.56%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 1   MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ 60
           MDWAF  KAWDKWAS SIGTFGQPLKAA+LINYDPTGPSRLLSTIAEQEGIL+NPIELNQ
Sbjct: 1   MDWAFAHKAWDKWASASIGTFGQPLKAAMLINYDPTGPSRLLSTIAEQEGILINPIELNQ 60

Query: 61  FIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAM 120
           FIDFIKRDKPQ ESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQT AFILVAM
Sbjct: 61  FIDFIKRDKPQTESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTAAFILVAM 120

Query: 121 YDGSIAAASRAMASADQLSWQLGRKNL 148
           YDGSIAAASRAMA+ADQLSWQLGRKNL
Sbjct: 121 YDGSIAAASRAMAAADQLSWQLGRKNL 147

[Close]

BLAST of Carg11427 vs. NCBI nr
Match: XP_011653239.1 (PREDICTED: uncharacterized protein LOC105435190 [Cucumis sativus])

HSP 1 Score: 287.7 bits (735), Expect = 2.2e-74
Identity = 138/146 (94.52%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ 60
           MDWAFV KAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ
Sbjct: 1   MDWAFVHKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ 60

Query: 61  FIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAM 120
           F+DFIKRDKPQNESFSIG NQYIMTSVHENWFCARCMNTIKHAGEGV+IVQTTAFIL+AM
Sbjct: 61  FVDFIKRDKPQNESFSIGLNQYIMTSVHENWFCARCMNTIKHAGEGVIIVQTTAFILIAM 120

Query: 121 YDGSIAAASRAMASADQLSWQLGRKN 147
           YDGSIAAASRAMA+ADQLSW L RKN
Sbjct: 121 YDGSIAAASRAMAAADQLSWVLARKN 146

[Close]

BLAST of Carg11427 vs. NCBI nr
Match: KGN53460.1 (hypothetical protein Csa_4G056510 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 1.1e-60
Identity = 118/125 (94.40%), Postives = 122/125 (97.60%), Query Frame = 0


Query: 22  GQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQ 81
           GQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQF+DFIKRDKPQNESFSIG NQ
Sbjct: 9   GQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFVDFIKRDKPQNESFSIGLNQ 68

Query: 82  YIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQ 141
           YIMTSVHENWFCARCMNTIKHAGEGV+IVQTTAFIL+AMYDGSIAAASRAMA+ADQLSW 
Sbjct: 69  YIMTSVHENWFCARCMNTIKHAGEGVIIVQTTAFILIAMYDGSIAAASRAMAAADQLSWV 128

Query: 142 LGRKN 147
           L RKN
Sbjct: 129 LARKN 133

[Close]

BLAST of Carg11427 vs. NCBI nr
Match: GAV56960.1 (Profilin domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59
Identity = 106/147 (72.11%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 1   MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ 60
           MDW FV +AW+KWAS ++G++G+PLKAALLINYDPTGPSRLLSTIAEQEGI  NPIEL++
Sbjct: 1   MDWGFVHRAWEKWASSNVGSYGEPLKAALLINYDPTGPSRLLSTIAEQEGIKANPIELSE 60

Query: 61  FIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAM 120
           FIDFI R+KPQ ESF +G NQYI+TS+HE+WFCARC+NT K AGEG +++QTTAF+LV +
Sbjct: 61  FIDFINRNKPQTESFVVGPNQYIVTSIHESWFCARCVNTSKPAGEGAIVMQTTAFLLVVL 120

Query: 121 YDGSIAAASRAMASADQLSWQLGRKNL 148
           YDGSI +ASRAM +ADQ +WQL R+NL
Sbjct: 121 YDGSIGSASRAMVAADQFAWQLSRRNL 147

[Close]

BLAST of Carg11427 vs. TAIR10
Match: AT4G19400.1 (Profilin family protein)

HSP 1 Score: 199.1 bits (505), Expect = 1.9e-51
Identity = 93/147 (63.27%), Postives = 121/147 (82.31%), Query Frame = 0


Query: 1   MDWAFVRKAWDKW-ASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELN 60
           MD AFV +AWDKW  +G++G+ G PLKAA+LINYDPTGPSRLLSTIA+QEGI + P++L 
Sbjct: 1   MDSAFVDRAWDKWVTTGNVGSSGNPLKAAILINYDPTGPSRLLSTIAKQEGIDIYPVDLK 60

Query: 61  QFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVA 120
           QFIDF++      E+F +GSNQYI+TS+HENWF ARC+NT + AGEG +++QT  ++LVA
Sbjct: 61  QFIDFMRCGNLPTETFVLGSNQYIITSIHENWFAARCLNTSQPAGEGAIVMQTAVYVLVA 120

Query: 121 MYDGSIAAASRAMASADQLSWQLGRKN 147
           +YDGSI +AS+AMA+ADQ + QL RKN
Sbjct: 121 LYDGSIGSASQAMAAADQFASQLSRKN 147

[Close]

BLAST of Carg11427 vs. TrEMBL
Match: tr|A0A1S3BTL7|A0A1S3BTL7_CUCME (uncharacterized protein LOC103493024 OS=Cucumis melo OX=3656 GN=LOC103493024 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.0e-75
Identity = 139/147 (94.56%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ 60
           MDWAFV KAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ
Sbjct: 1   MDWAFVHKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ 60

Query: 61  FIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAM 120
           F+DFIKRDKPQNESFSIG NQYIMTSVHENWFCARCMNTIKHAGEGV+IVQTTAFIL+AM
Sbjct: 61  FVDFIKRDKPQNESFSIGLNQYIMTSVHENWFCARCMNTIKHAGEGVIIVQTTAFILIAM 120

Query: 121 YDGSIAAASRAMASADQLSWQLGRKNL 148
           YDGSIAAASRAMA+ADQLSW L RKNL
Sbjct: 121 YDGSIAAASRAMAAADQLSWVLARKNL 147

[Close]

BLAST of Carg11427 vs. TrEMBL
Match: tr|A0A0A0KV40|A0A0A0KV40_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056510 PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 7.0e-61
Identity = 118/125 (94.40%), Postives = 122/125 (97.60%), Query Frame = 0


Query: 22  GQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQ 81
           GQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQF+DFIKRDKPQNESFSIG NQ
Sbjct: 9   GQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFVDFIKRDKPQNESFSIGLNQ 68

Query: 82  YIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQ 141
           YIMTSVHENWFCARCMNTIKHAGEGV+IVQTTAFIL+AMYDGSIAAASRAMA+ADQLSW 
Sbjct: 69  YIMTSVHENWFCARCMNTIKHAGEGVIIVQTTAFILIAMYDGSIAAASRAMAAADQLSWV 128

Query: 142 LGRKN 147
           L RKN
Sbjct: 129 LARKN 133

[Close]

BLAST of Carg11427 vs. TrEMBL
Match: tr|A0A1Q3AMV2|A0A1Q3AMV2_CEPFO (Profilin domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_00499 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 7.7e-60
Identity = 106/147 (72.11%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 1   MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ 60
           MDW FV +AW+KWAS ++G++G+PLKAALLINYDPTGPSRLLSTIAEQEGI  NPIEL++
Sbjct: 1   MDWGFVHRAWEKWASSNVGSYGEPLKAALLINYDPTGPSRLLSTIAEQEGIKANPIELSE 60

Query: 61  FIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAM 120
           FIDFI R+KPQ ESF +G NQYI+TS+HE+WFCARC+NT K AGEG +++QTTAF+LV +
Sbjct: 61  FIDFINRNKPQTESFVVGPNQYIVTSIHESWFCARCVNTSKPAGEGAIVMQTTAFLLVVL 120

Query: 121 YDGSIAAASRAMASADQLSWQLGRKNL 148
           YDGSI +ASRAM +ADQ +WQL R+NL
Sbjct: 121 YDGSIGSASRAMVAADQFAWQLSRRNL 147

[Close]

BLAST of Carg11427 vs. TrEMBL
Match: tr|D7TFE5|D7TFE5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0087g00410 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.8e-59
Identity = 109/147 (74.15%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 1   MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ 60
           MDW FVRKAWDKW S SIG+ G+PLKAALLINYDPTGPSRLLSTIAEQEGI   PIE+NQ
Sbjct: 1   MDWTFVRKAWDKWISTSIGSSGEPLKAALLINYDPTGPSRLLSTIAEQEGIRAKPIEVNQ 60

Query: 61  FIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAM 120
           F+DFIKR+  Q+ESF IG NQY++TS+H+ WFCARCMNT   AGEG +++QTT+FILVA+
Sbjct: 61  FVDFIKRNNLQSESFFIGQNQYLVTSIHDGWFCARCMNTSHPAGEGAIVMQTTSFILVAL 120

Query: 121 YDGSIAAASRAMASADQLSWQLGRKNL 148
           YDGSI +ASRAM   DQ +WQLGRKNL
Sbjct: 121 YDGSIGSASRAMVDVDQFAWQLGRKNL 147

[Close]

BLAST of Carg11427 vs. TrEMBL
Match: tr|I1NCB8|I1NCB8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100811973 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.5e-58
Identity = 110/147 (74.83%), Postives = 128/147 (87.07%), Query Frame = 0


Query: 1   MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ 60
           MDWAFV K WDKWAS +IG  G PLKAALLINYDPTGPSRLLSTIAEQEGI  NPIEL+ 
Sbjct: 1   MDWAFVHKTWDKWASTNIGYSGHPLKAALLINYDPTGPSRLLSTIAEQEGIRANPIELSH 60

Query: 61  FIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAM 120
           F+DFIK++K Q+E F IGSNQY++TS+HENWF ARC+NT K AGEG +++QT A+ILVA+
Sbjct: 61  FVDFIKQNKLQSELFIIGSNQYLVTSIHENWFSARCINTSKPAGEGAIVIQTAAYILVAL 120

Query: 121 YDGSIAAASRAMASADQLSWQLGRKNL 148
           Y+GSI  ASRAMA+ADQL+WQLGRKNL
Sbjct: 121 YEGSIGPASRAMAAADQLTWQLGRKNL 147

The following BLAST results are available for this feature:

BLAST of Carg11427 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451862.1	7.5e-75	94.56	PREDICTED: uncharacterized protein LOC103493024 [Cucumis melo]	[more]
XP_022136632.1	1.7e-74	94.56	uncharacterized protein LOC111008291 [Momordica charantia]	[more]
XP_011653239.1	2.2e-74	94.52	PREDICTED: uncharacterized protein LOC105435190 [Cucumis sativus]	[more]
KGN53460.1	1.1e-60	94.40	hypothetical protein Csa_4G056510 [Cucumis sativus]	[more]
GAV56960.1	1.2e-59	72.11	Profilin domain-containing protein [Cephalotus follicularis]	[more]

BLAST of Carg11427 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19400.1	1.9e-51	63.27	Profilin family protein	[more]

BLAST of Carg11427 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg11427 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BTL7\|A0A1S3BTL7_CUCME	5.0e-75	94.56	uncharacterized protein LOC103493024 OS=Cucumis melo OX=3656 GN=LOC103493024 PE=...	[more]
tr\|A0A0A0KV40\|A0A0A0KV40_CUCSA	7.0e-61	94.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056510 PE=3 SV=1	[more]
tr\|A0A1Q3AMV2\|A0A1Q3AMV2_CEPFO	7.7e-60	72.11	Profilin domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3...	[more]
tr\|D7TFE5\|D7TFE5_VITVI	3.8e-59	74.15	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0087g00410 PE=3 SV=...	[more]
tr\|I1NCB8\|I1NCB8_SOYBN	1.5e-58	74.83	Uncharacterized protein OS=Glycine max OX=3847 GN=100811973 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036140	PFN_sf
IPR005455	PFN

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11427-RA	Carg11427-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 43..139 e-value: 1.1E-10 score: 41.7
None	No IPR available	GENE3D	G3DSA:3.30.450.30		coord: 9..146 e-value: 1.2E-9 score: 40.2
None	No IPR available	PANTHER	PTHR36780	FAMILY NOT NAMED	coord: 1..146
IPR036140	Profilin superfamily	SUPERFAMILY	SSF55770	Profilin (actin-binding protein)	coord: 10..132

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11427	Cla005464	Watermelon (97103) v1	carwmB0652
Carg11427	Csa4G056510	Cucumber (Chinese Long) v2	carcuB0677
Carg11427	MELO3C016211	Melon (DHL92) v3.5.1	carmeB0653
Carg11427	CSPI04G06850	Wild cucumber (PI 183967)	carcpiB0687
Carg11427	Cucsa.228730	Cucumber (Gy14) v1	carcgyB0733
Carg11427	CmaCh16G005120	Cucurbita maxima (Rimu)	carcmaB0924
Carg11427	CmoCh16G005590	Cucurbita moschata (Rifu)	carcmoB0898
Carg11427	CmoCh04G006360	Cucurbita moschata (Rifu)	carcmoB0902
Carg11427	Lsi07G007680	Bottle gourd (USVL1VR-Ls)	carlsiB596
Carg11427	Cp4.1LG14g02790	Cucurbita pepo (Zucchini)	carcpeB0926
Carg11427	CsGy4G006780	Cucumber (Gy14) v2	carcgybB0652
Carg11427	MELO3C016211.2	Melon (DHL92) v3.6.1	carmedB0664
Carg11427	CsaV3_4G007060	Cucumber (Chinese Long) v3	carcucB0689
Carg11427	Cla97C07G137920	Watermelon (97103) v2	carwmbB0682
Carg11427	Bhi01G002349	Wax gourd	carwgoB0770

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11427	Carg13151	Silver-seed gourd	carcarB050

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11427	Silver-seed gourd	carcarB052
Carg11427	Cucurbita maxima (Rimu)	carcmaB0927
Carg11427	Cucurbita pepo (Zucchini)	carcpeB0929
Carg11427	Melon (DHL92) v3.5.1	carmeB0652
Carg11427	Melon (DHL92) v3.6.1	carmedB0663
Carg11427	Watermelon (Charleston Gray)	carwcgB0637