Carg11407 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11407
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Serine hydroxymethyltransferase
Location	Cucurbita_argyrosperma_scaffold_025 : 806892 .. 809947 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGCTGCGGGTGGTGCTGCAATGATGGGCTCTTTGCAAGTTGTTGTTTGTGCGAAGGGATCGTGTTTTCCTTCAAAAGGTTATGGCATCCGTGTGTTTCCGCAAAACAGGAGAATGAACATCTTGAAACTCCGTAAATCCTCTAATGTTGAAGCAAGCATGGTTGCGGGGAAGCAATCATCTTCCTTATCTGTCACCGTTCCAGACATTGAAGGTGAAATATTATCTATTGCCATTCACCAATTTTATGATTTGTTTGAAAAGAATGGCATATCTGTTTGATCTATTAAAACTGTGCTAGATTTCCTTTGTTTCTTAATCACAAACCAATTTGAGTTTGATTGAGTGGGAGAAATTAGCTTAGGTTGACTTCATTGCTTGAATTCAGGCGTAAGTGACTTTGTAGACCATGGTTTGAATGAAATGGATCCCGAAGTTCAAAGTATTATCAAAAAAGAAAAGGAGCGACAGTTTAAAAGCCTCGAACTTATTGCCTCAGAGAATTTTACGTCTCGGGCAGTTATGGAGGCAGTAGGGTCCTGTCTCACAAACAAATATTCAGAAGGATTACCTGGAAAAAGGTGAAATTTCTTCATTTGATGTACTATGGACGTGATTCCAATTTTCTTTTTGGGAGGTCTTGAGATTTTTTGTTGTTGTTAAGAGGATTATGCAAATTATGAGTTTTATTATGCATCTTAGATACTACGGTGGCAATGAACATATCGACGAGCTTGAAACACTCTGTCAACAAAGGGCTCTAGCAGCCTTTCGTTTGGACAATAACAAGTGGGGTGTAAATGTTCAACCGTTATCTGGTTCACCTGCTAACTTCGAGGTCTATACTGCAATTCTTAATCCACATGATCGGATCATGGTGAGTAGTCTCTTGATTAGCTTTTTTAATAACCGTGTTAATTTAGACGATTGCTGATGCTACTGATTCATGTTAAATGGCTTTAGGGTTTAGACTTGCCTCATGGAGGACATTTGTCTCATGGGTTTATGACACCAAAAAGGAGGGTATCAGGCACATCAATTTATTTTGAATCTATGCCTTATCGTCTTGATGAGACTACAGGTACCTCCCACGTGGGATCTACTGTTTTTTACGGTCTCTTTCATAGTTTATGCATTCTAATTAAATAGCAAACTCATGCAGGTATCGTAGATTATGACATGCTCGAAAAAACTGCTAACTTGTTTCGGCCAAAGCTGATTATCGCTGGTGCAAGTGCTTATCCACGAGATTTTGACTATCCTCGCATGAGAAAAGTGAGGATTTATCTAAATTCAACGTCGTTCATCATTTTCCATTGAGTGGCCGATTCTGTTGCATTAGCGAATAACTTAATTTGTTCTGGTAGATTGCTGATTCTGTTGGTGCTTTTCTCATGATGGATATGGCTCACATAAGTGGGCTTGTTGCTGCTTCTGTGGTCGCCGATCCTTTTGAATACTGTGATATCGTGACCACAACAACACACAAGGTAAAAGATAAATTTTGCTAATGGGTGCTTCCTCTTTAAGTACTGGTTTTCCTCTTAGTTCATTTTATCTTTTGAAATAAGAAACGTGTACATTCAAGAACCGAAACTAAAAGAGGAATGAACAACCTATCGGCCAAGGTAGAGACCGTCCCGTGGGAGAAAGCTAATACCAAAAAATAGAGAGATCAAATTCATTTCTTACTCATTTACTTGTATTGAAATTTTTTGTCATTCTTCATATCATTTTGCCTTATCTTAGAACACATTAGCTTCATATATAATCTGGTATGATGATGATTGTTCTTCGCATTAAAGAAACTACTTTCTTAGCCTGAAAGAGATATCAAATTGTCTGCAGTCTCTGAGAGGTCCAAGAGGTGGCATGATCTTCTTCAGGAAGGATCCTGTTCTCGGAGTCGACTTAGAATCTGCTATTAATAATGCTGTGTTTCCAGGATTACAGGTTGGTCCAACTAGTCTTGTGGTAGCACATAAAGAAGAGTTGTTTGTTTTGCTCGATTCTTCGCCTTCTGATCCTAAGTATTGTTGATTTTATGGCTGTCATGCAGGGTGGTCCTCATAATCATACAATTGGGGGACTTGCTGTCTGCTTGAAGCATGCACAATCTCCAGAGTTCAAGGTCTATCAGAACAAGGTACTTCAATTGCTCCATGAGCTAAACATGGTGTAAGACACTGTTTTCTTATTTTTCTAACACAGTTCTTCATATTTTAGGTCATCTCCAATTGTAGAGCTCTTGCAAGTCGACTTATTGAGTTAGGTTATAAGCTAGTCTCTGGCGGAAGTGACAATCACCTAGTTCTTGTCGATCTCAGGCCATTGGTAAATCATCATAATTGTGCGTTAACTAACAACTGTAATAAAGCATATGTTAATCTATAAGTAAATTCTAACAACAGGGTATCGATGGGGCACGAGTGGAGAAAATTCTCGACATGGCCTCAATCACTCTCAACAAGAACTCTGTTCCCGGTAACGACGCGTGTTTTCTAAGGCTGTTCATCATATCCTGTTTTCTTGAACTGACTGTTGGCTGTTTTATACACAGGTGACAAGAGTGCTTTAGTTCCAGGAGGCATTCGAATCGGGTCGCCTGCCATGACCACCCGAGGATTCACCGAGAAAGAGTTCATAGCAGTTGCAGACTTTATCCATGAGGGTGTTAAGATAACTCTTGATGCCAAACCACTGGCCCCAGGATCAAAGCTCCAAGAGTTCCTCAAGTTCGTGACAACCTCTGATTTCCCTTTGATCGACCGAGTTTCTGATCTTCGCTCGAGGGTTGAAGCTCTTACAACTCAATTCCCAATACCTGGCCTGTAAGTATCACTTCACAGAAGGAAATGGGTATACATTTACAATAAACAGGGGGGGAGGGGGGACATGTCGTGTTGTGTCGTCGTGTTTGTGTTAGTTGTACTAATAGAAACTAAGATAGTTTGGAACATTATATAAGACGTTGTTGCAGCTATGTACGAGGCATTAGTTAGCTACGTTCGTGTTGGCAGATATTAATATTTGCCAACACGTTCAATTATTAG

mRNA sequence

ATGCAGGCTGCGGGTGGTGCTGCAATGATGGGCTCTTTGCAAGTTGTTGTTTGTGCGAAGGGATCGTGTTTTCCTTCAAAAGGTTATGGCATCCGTGTGTTTCCGCAAAACAGGAGAATGAACATCTTGAAACTCCGTAAATCCTCTAATGTTGAAGCAAGCATGGTTGCGGGGAAGCAATCATCTTCCTTATCTGTCACCGTTCCAGACATTGAAGGCGTAAGTGACTTTGTAGACCATGGTTTGAATGAAATGGATCCCGAAGTTCAAAGTATTATCAAAAAAGAAAAGGAGCGACAGTTTAAAAGCCTCGAACTTATTGCCTCAGAGAATTTTACGTCTCGGGCAGTTATGGAGGCAGTAGGGTCCTGTCTCACAAACAAATATTCAGAAGGATTACCTGGAAAAAGATACTACGGTGGCAATGAACATATCGACGAGCTTGAAACACTCTGTCAACAAAGGGCTCTAGCAGCCTTTCGTTTGGACAATAACAAGTGGGGTGTAAATGTTCAACCGTTATCTGGTTCACCTGCTAACTTCGAGGTCTATACTGCAATTCTTAATCCACATGATCGGATCATGGGTTTAGACTTGCCTCATGGAGGACATTTGTCTCATGGGTTTATGACACCAAAAAGGAGGGTATCAGGCACATCAATTTATTTTGAATCTATGCCTTATCGTCTTGATGAGACTACAGGTATCGTAGATTATGACATGCTCGAAAAAACTGCTAACTTGTTTCGGCCAAAGCTGATTATCGCTGGTGCAAGTGCTTATCCACGAGATTTTGACTATCCTCGCATGAGAAAAATTGCTGATTCTGTTGGTGCTTTTCTCATGATGGATATGGCTCACATAAGTGGGCTTGTTGCTGCTTCTGTGGTCGCCGATCCTTTTGAATACTGTGATATCGTGACCACAACAACACACAAGTCTCTGAGAGGTCCAAGAGGTGGCATGATCTTCTTCAGGAAGGATCCTGTTCTCGGAGTCGACTTAGAATCTGCTATTAATAATGCTGTGTTTCCAGGATTACAGGGTGGTCCTCATAATCATACAATTGGGGGACTTGCTGTCTGCTTGAAGCATGCACAATCTCCAGAGTTCAAGGTCTATCAGAACAAGGTCATCTCCAATTGTAGAGCTCTTGCAAGTCGACTTATTGAGTTAGGTTATAAGCTAGTCTCTGGCGGAAGTGACAATCACCTAGTTCTTGTCGATCTCAGGCCATTGGGTATCGATGGGGCACGAGTGGAGAAAATTCTCGACATGGCCTCAATCACTCTCAACAAGAACTCTGTTCCCGGTGACAAGAGTGCTTTAGTTCCAGGAGGCATTCGAATCGGGTCGCCTGCCATGACCACCCGAGGATTCACCGAGAAAGAGTTCATAGCAGTTGCAGACTTTATCCATGAGGGTGTTAAGATAACTCTTGATGCCAAACCACTGGCCCCAGGATCAAAGCTCCAAGAGTTCCTCAAGTTCGTGACAACCTCTGATTTCCCTTTGATCGACCGAGTTTCTGATCTTCGCTCGAGGGTTGAAGCTCTTACAACTCAATTCCCAATACCTGGCCTGTAAGTATCACTTCACAGAAGGAAATGGGTATACATTTACAATAAACAGGGGGGGAGGGGGGACATGTCGTGTTGTGTCGTCGTGTTTGTGTTAGTTGTACTAATAGAAACTAAGATAGTTTGGAACATTATATAAGACGTTGTTGCAGCTATGTACGAGGCATTAGTTAGCTACGTTCGTGTTGGCAGATATTAATATTTGCCAACACGTTCAATTATTAG

Coding sequence (CDS)

ATGCAGGCTGCGGGTGGTGCTGCAATGATGGGCTCTTTGCAAGTTGTTGTTTGTGCGAAGGGATCGTGTTTTCCTTCAAAAGGTTATGGCATCCGTGTGTTTCCGCAAAACAGGAGAATGAACATCTTGAAACTCCGTAAATCCTCTAATGTTGAAGCAAGCATGGTTGCGGGGAAGCAATCATCTTCCTTATCTGTCACCGTTCCAGACATTGAAGGCGTAAGTGACTTTGTAGACCATGGTTTGAATGAAATGGATCCCGAAGTTCAAAGTATTATCAAAAAAGAAAAGGAGCGACAGTTTAAAAGCCTCGAACTTATTGCCTCAGAGAATTTTACGTCTCGGGCAGTTATGGAGGCAGTAGGGTCCTGTCTCACAAACAAATATTCAGAAGGATTACCTGGAAAAAGATACTACGGTGGCAATGAACATATCGACGAGCTTGAAACACTCTGTCAACAAAGGGCTCTAGCAGCCTTTCGTTTGGACAATAACAAGTGGGGTGTAAATGTTCAACCGTTATCTGGTTCACCTGCTAACTTCGAGGTCTATACTGCAATTCTTAATCCACATGATCGGATCATGGGTTTAGACTTGCCTCATGGAGGACATTTGTCTCATGGGTTTATGACACCAAAAAGGAGGGTATCAGGCACATCAATTTATTTTGAATCTATGCCTTATCGTCTTGATGAGACTACAGGTATCGTAGATTATGACATGCTCGAAAAAACTGCTAACTTGTTTCGGCCAAAGCTGATTATCGCTGGTGCAAGTGCTTATCCACGAGATTTTGACTATCCTCGCATGAGAAAAATTGCTGATTCTGTTGGTGCTTTTCTCATGATGGATATGGCTCACATAAGTGGGCTTGTTGCTGCTTCTGTGGTCGCCGATCCTTTTGAATACTGTGATATCGTGACCACAACAACACACAAGTCTCTGAGAGGTCCAAGAGGTGGCATGATCTTCTTCAGGAAGGATCCTGTTCTCGGAGTCGACTTAGAATCTGCTATTAATAATGCTGTGTTTCCAGGATTACAGGGTGGTCCTCATAATCATACAATTGGGGGACTTGCTGTCTGCTTGAAGCATGCACAATCTCCAGAGTTCAAGGTCTATCAGAACAAGGTCATCTCCAATTGTAGAGCTCTTGCAAGTCGACTTATTGAGTTAGGTTATAAGCTAGTCTCTGGCGGAAGTGACAATCACCTAGTTCTTGTCGATCTCAGGCCATTGGGTATCGATGGGGCACGAGTGGAGAAAATTCTCGACATGGCCTCAATCACTCTCAACAAGAACTCTGTTCCCGGTGACAAGAGTGCTTTAGTTCCAGGAGGCATTCGAATCGGGTCGCCTGCCATGACCACCCGAGGATTCACCGAGAAAGAGTTCATAGCAGTTGCAGACTTTATCCATGAGGGTGTTAAGATAACTCTTGATGCCAAACCACTGGCCCCAGGATCAAAGCTCCAAGAGTTCCTCAAGTTCGTGACAACCTCTGATTTCCCTTTGATCGACCGAGTTTCTGATCTTCGCTCGAGGGTTGAAGCTCTTACAACTCAATTCCCAATACCTGGCCTGTAA

Protein sequence

MQAAGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQSSSLSVTVPDIEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPANFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITLDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL

Homology

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BLAST of Carg11407 vs. NCBI nr
Match: XP_023521537.1 (serine hydroxymethyltransferase 3, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1054.7 bits (2726), Expect = 1.1e-304
Identity = 526/528 (99.62%), Postives = 526/528 (99.62%), Query Frame = 0


Query: 1   MQAAGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60
           MQAA GAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ
Sbjct: 1   MQAASGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60

Query: 61  SSSLSVTVPDIEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEA 120
           SSSLSVTVPDIEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEA
Sbjct: 61  SSSLSVTVPDIEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEA 120

Query: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN 180
           VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN
Sbjct: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN 180

Query: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240
           FEVYTAIL PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD
Sbjct: 181 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240

Query: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADP 300
           MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADP
Sbjct: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADP 300

Query: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360
           FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA
Sbjct: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360

Query: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420
           VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV
Sbjct: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420

Query: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL 480
           EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL
Sbjct: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL 480

Query: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL
Sbjct: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 528

[Close]

BLAST of Carg11407 vs. NCBI nr
Match: XP_022985017.1 (serine hydroxymethyltransferase 3, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 1053.9 bits (2724), Expect = 1.8e-304
Identity = 525/528 (99.43%), Postives = 527/528 (99.81%), Query Frame = 0


Query: 1   MQAAGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60
           MQA GGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ
Sbjct: 1   MQAVGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60

Query: 61  SSSLSVTVPDIEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEA 120
           SSSLSVTVPDIEGVSDFVD+GLNEMDPEVQSIIKKEK+RQFKSLELIASENFTSRAVMEA
Sbjct: 61  SSSLSVTVPDIEGVSDFVDNGLNEMDPEVQSIIKKEKDRQFKSLELIASENFTSRAVMEA 120

Query: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN 180
           VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN
Sbjct: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN 180

Query: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240
           FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD
Sbjct: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240

Query: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADP 300
           MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADP
Sbjct: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADP 300

Query: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360
           FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA
Sbjct: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360

Query: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420
           VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV
Sbjct: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420

Query: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL 480
           EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL
Sbjct: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL 480

Query: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL
Sbjct: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 528

[Close]

BLAST of Carg11407 vs. NCBI nr
Match: XP_022931520.1 (serine hydroxymethyltransferase 3, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 1051.6 bits (2718), Expect = 9.0e-304
Identity = 523/528 (99.05%), Postives = 525/528 (99.43%), Query Frame = 0


Query: 1   MQAAGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60
           MQAAGGAAMMGSLQ+VVCAKGSCFPSKGYGIRVFPQNRRMNI KLRKSSNVEASMVAGKQ
Sbjct: 1   MQAAGGAAMMGSLQIVVCAKGSCFPSKGYGIRVFPQNRRMNISKLRKSSNVEASMVAGKQ 60

Query: 61  SSSLSVTVPDIEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEA 120
           SSS SVTVPDIEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEA
Sbjct: 61  SSSFSVTVPDIEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEA 120

Query: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN 180
           VGSCLTNKYSEGLPGKRYYGGNEHID+LETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN
Sbjct: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDKLETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN 180

Query: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240
           FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD
Sbjct: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240

Query: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADP 300
           MLEKTANLFRPKLIIAGASAYPRDFDYPRMR IADSVGAFLMMDMAHISGLVAASVVADP
Sbjct: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRNIADSVGAFLMMDMAHISGLVAASVVADP 300

Query: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360
           FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA
Sbjct: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360

Query: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420
           VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV
Sbjct: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420

Query: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL 480
           EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL
Sbjct: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL 480

Query: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL
Sbjct: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 528

[Close]

BLAST of Carg11407 vs. NCBI nr
Match: XP_011653260.1 (PREDICTED: serine hydroxymethyltransferase 3, chloroplastic [Cucumis sativus] >KGN53502.1 hypothetical protein Csa_4G062380 [Cucumis sativus])

HSP 1 Score: 993.0 bits (2566), Expect = 3.8e-286
Identity = 491/528 (92.99%), Postives = 507/528 (96.02%), Query Frame = 0


Query: 1   MQAAGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60
           MQA  G A+MGSLQV VC KGSCFPSK   I VFPQ ++MNILK  KS  VEASMVAGK 
Sbjct: 1   MQATSGVAVMGSLQVAVCGKGSCFPSKSSSICVFPQQKKMNILKPCKSFKVEASMVAGKP 60

Query: 61  SSSLSVTVPDIEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEA 120
           SSS+SVTVP+I GVS+FVDH L+E DPEV+SII KEK+RQFKSLELIASENFTSRAVMEA
Sbjct: 61  SSSVSVTVPEIGGVSNFVDHALSETDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEA 120

Query: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN 180
           VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAF LDNNKWGVNVQPLSGSPAN
Sbjct: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPAN 180

Query: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240
           FEVYTA+LNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD
Sbjct: 181 FEVYTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240

Query: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADP 300
           MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIAD+VGAFLMMDMAHISGLVAASVVADP
Sbjct: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVADP 300

Query: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360
           FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA
Sbjct: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360

Query: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420
           VCLKHAQSPEFKVYQNKVI+NCRALA+RL+ELGYKLVSGGSDNHLVLVDLRPLGIDGARV
Sbjct: 361 VCLKHAQSPEFKVYQNKVIANCRALANRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420

Query: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL 480
           EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEF+AVADFIHEGVKITL
Sbjct: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITL 480

Query: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           DAKPLAPGSKLQEFLKFVTTSDFPL DR+SDLRSRVEALTTQFPIPGL
Sbjct: 481 DAKPLAPGSKLQEFLKFVTTSDFPLTDRISDLRSRVEALTTQFPIPGL 528

[Close]

BLAST of Carg11407 vs. NCBI nr
Match: XP_008451853.1 (PREDICTED: serine hydroxymethyltransferase 3, chloroplastic [Cucumis melo])

HSP 1 Score: 991.1 bits (2561), Expect = 1.4e-285
Identity = 491/528 (92.99%), Postives = 506/528 (95.83%), Query Frame = 0


Query: 1   MQAAGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60
           MQA  GAA+MGSL+V VC KGSCFPSK   I VFPQ+++MNILK  KSS V+ASMV GK 
Sbjct: 1   MQATSGAAVMGSLEVAVCGKGSCFPSKSSSICVFPQHKKMNILKPSKSSKVKASMVVGKP 60

Query: 61  SSSLSVTVPDIEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEA 120
           SSS SVTVP+I GVS FVDH L+E DPEV+SII KEK+RQFKSLELIASENFTSRAVMEA
Sbjct: 61  SSSASVTVPEIGGVSHFVDHALSETDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEA 120

Query: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN 180
           VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAF LDNNKWGVNVQPLSGSPAN
Sbjct: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPAN 180

Query: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240
           FEVYTA+LNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD
Sbjct: 181 FEVYTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240

Query: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADP 300
           MLE+TANLFRPKLIIAGASAYPRDFDYPRMRKIAD+VGAFLMMDMAHISGLVAASVVADP
Sbjct: 241 MLERTANLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVADP 300

Query: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360
           FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA
Sbjct: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360

Query: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420
           VCLKHAQSPEFKVYQNKVI+NCRALASRL+ELGYKLVSGGSDNHLVLVDLRPLGIDGARV
Sbjct: 361 VCLKHAQSPEFKVYQNKVIANCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420

Query: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL 480
           EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEF AVADFIHEGVKITL
Sbjct: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFAAVADFIHEGVKITL 480

Query: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           DAKPLAPGSKLQEFLKFVTTSDFPL DRVSDLRSRVEALTTQFPIPGL
Sbjct: 481 DAKPLAPGSKLQEFLKFVTTSDFPLTDRVSDLRSRVEALTTQFPIPGL 528

[Close]

BLAST of Carg11407 vs. TAIR10
Match: AT4G32520.1 (serine hydroxymethyltransferase 3)

HSP 1 Score: 839.3 bits (2167), Expect = 1.3e-243
Identity = 419/531 (78.91%), Postives = 468/531 (88.14%), Query Frame = 0


Query: 1   MQAAGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60
           MQA  G   M SLQ     +GS FP     +  F Q  + NI K  +SS ++ ++V+  +
Sbjct: 1   MQACCGGNSMASLQQPGRVQGSVFPPIMPPVTKFSQQLKFNISKPFRSSFLKRNLVSEMR 60

Query: 61  SSSLSVTVPDIEGVS---DFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAV 120
           +S  SV++P++E  S    F D+GL E+DPEV++II KEK+RQF+SLELIASENFTSRAV
Sbjct: 61  AS--SVSLPNVEISSKEIPFEDYGLGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAV 120

Query: 121 MEAVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGS 180
           MEAVGSCLTNKYSEGLPGKRYYGGNE+ID+LETLCQ RALAAFRLD+ KWGVNVQPLSGS
Sbjct: 121 MEAVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGS 180

Query: 181 PANFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIV 240
           PANF VYTAIL+PHDRIMGLDLPHGGHLSHGFMT KRRVSGTSIYFESMPYRLDE+TGIV
Sbjct: 181 PANFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIV 240

Query: 241 DYDMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVV 300
           DYDMLEKTA LFRPKLIIAGASAY RDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVV
Sbjct: 241 DYDMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVV 300

Query: 301 ADPFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIG 360
           ADPFEYCDIVTTTTHKSLRGPRGGMIFFRKDP+ GVDLESA+NNAVFPGLQGGPHNHTIG
Sbjct: 301 ADPFEYCDIVTTTTHKSLRGPRGGMIFFRKDPINGVDLESAVNNAVFPGLQGGPHNHTIG 360

Query: 361 GLAVCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDG 420
           GLAVCLKHAQSPEFK YQ +V+SNCRALA+RL+ELG+KLVSGGSDNHLVLVDLRP+G+DG
Sbjct: 361 GLAVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDG 420

Query: 421 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVK 480
           ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG +EK+F+ VADFI EGV+
Sbjct: 421 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVE 480

Query: 481 ITLDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           IT++AK  APGSKLQ+F KFVT+ +FPL +RV  L+ RVE  T++FPIPG+
Sbjct: 481 ITMEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPGV 529

[Close]

BLAST of Carg11407 vs. TAIR10
Match: AT4G37930.1 (serine transhydroxymethyltransferase 1)

HSP 1 Score: 578.9 bits (1491), Expect = 3.1e-165
Identity = 280/454 (61.67%), Postives = 345/454 (75.99%), Query Frame = 0


Query: 82  LNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 141
           L E+DPE+  II+ EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGG
Sbjct: 55  LEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 114

Query: 142 NEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPANFEVYTAILNPHDRIMGLDLPH 201
           NE+ID  ETLCQ+RAL AFRLD  KWGVNVQPLSGSPANF VYTA+L PH+RIM LDLPH
Sbjct: 115 NEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPH 174

Query: 202 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLFRPKLIIAGASAY 261
           GGHLSHG+ T  +++S  SI+FE+MPYRLDE+TG +DYD +EK+A LFRPKLI+AGASAY
Sbjct: 175 GGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAY 234

Query: 262 PRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGG 321
            R +DY R+RK+ +   A ++ DMAHISGLVAA+V+  PF+Y D+VTTTTHKSLRGPRG 
Sbjct: 235 ARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGA 294

Query: 322 MIFFRK--------DPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 381
           MIFFRK           +  D E  IN AVFPGLQGGPHNHTI GLAV LK A + E+K 
Sbjct: 295 MIFFRKGVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKA 354

Query: 382 YQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMASITLNK 441
           YQ +V+SN    A  L+E GY+LVSGG+DNHLVLV+L+P GIDG+RVEK+L+   I  NK
Sbjct: 355 YQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNK 414

Query: 442 NSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITLDAKPLAPGSKLQE 501
           N+VPGD SA+VPGGIR+G+PA+T+RGF E++F  VA++  + V I L  K  A G+KL++
Sbjct: 415 NTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKD 474

Query: 502 FLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPG 528
           F+  + +S   +   ++ LR  VE    QFP  G
Sbjct: 475 FVSAMESSS-TIQSEIAKLRHEVEEFAKQFPTIG 507

[Close]

BLAST of Carg11407 vs. TAIR10
Match: AT5G26780.3 (serine hydroxymethyltransferase 2)

HSP 1 Score: 564.7 bits (1454), Expect = 6.0e-161
Identity = 280/470 (59.57%), Postives = 346/470 (73.62%), Query Frame = 0


Query: 82  LNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 141
           L+E+DPEV  II+ EK RQ+K  ELI SENFTS +VM+AVGS +TNKYSEG PG RYYGG
Sbjct: 55  LDEIDPEVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGG 114

Query: 142 NEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPANFEVYTAILNPHDRIMGLDLPH 201
           NE+ID  ETLCQ+RAL AF+LD +KWGVNVQ LSGSPANF+VYTA+L PH+RIM LDLPH
Sbjct: 115 NEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPH 174

Query: 202 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLFRPKLIIAGASAY 261
           GGHLSHG+ T  +++S  SI+FE+MPYRLDE TG +DYD LEK+A LFRPKLI+AGASAY
Sbjct: 175 GGHLSHGYQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAY 234

Query: 262 PRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGG 321
            R +DY R+RK+ +   A ++ DMAHISGLVAA V+  PFEY D+VTTTTHKSLRGPRG 
Sbjct: 235 ARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 294

Query: 322 MIFFRK--------DPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 381
           MIFFRK           +  D E  IN AVFPGLQGGPHNHTI GLAV LK A++PE+K 
Sbjct: 295 MIFFRKGLKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKA 354

Query: 382 YQNKVISNCRALA----------------SRLIELGYKLVSGGSDNHLVLVDLRPLGIDG 441
           YQ++V+ NC   A                  L+  GY LVSGG+DNHLVLV+L+  GIDG
Sbjct: 355 YQDQVLRNCSKFAELDIRPTVIISYGLSMQTLLAKGYDLVSGGTDNHLVLVNLKNKGIDG 414

Query: 442 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVK 501
           +RVEK+L++  I  NKN+VPGD SA+VPGGIR+G+PA+T+RGF E++F  VA++    VK
Sbjct: 415 SRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEYFDLAVK 474

Query: 502 ITLDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPG 528
           I L  K  + G+KL++F+  + +++  L   +S LR  VE    QFP  G
Sbjct: 475 IALKIKAESQGTKLKDFVATMQSNE-KLQSEMSKLREMVEEYAKQFPTIG 523

[Close]

BLAST of Carg11407 vs. TAIR10
Match: AT4G13930.1 (serine hydroxymethyltransferase 4)

HSP 1 Score: 544.3 bits (1401), Expect = 8.4e-155
Identity = 273/468 (58.33%), Postives = 337/468 (72.01%), Query Frame = 0


Query: 71  IEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYS 130
           +E VS + +  L  +DPE+  +I+KEK RQ + +ELIASENFTS AV+EA+GS LTNKYS
Sbjct: 1   MEPVSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 131 EGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPANFEVYTAILNP 190
           EG+PG RYYGGNE IDE+E LC+ RAL AF  D   WGVNVQP SGSPANF  YTA+L P
Sbjct: 61  EGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQP 120

Query: 191 HDRIMGLDLPHGGHLSHGFMTP-KRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLF 250
           HDRIMGLDLP GGHL+HG+ T   +++S TSIYFES+PY+++ TTG +DYD LE+ A  F
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDF 180

Query: 251 RPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTT 310
           RPKL+I G SAYPRD+DY R R IAD VGA L+ DMAHISGLVAA   A+PFEYCD+VTT
Sbjct: 181 RPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 311 TTHKSLRGPRGGMIFFRKDPV---------LGVDLESAINNAVFPGLQGGPHNHTIGGLA 370
           TTHKSLRGPR GMIF+RK P             D E  IN AVFP LQGGPHNH IG LA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALA 300

Query: 371 VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV 430
           V LK A +P FKVY  +V +N  AL + L+  GY++V+ G++NHLVL DLRPLG+ G +V
Sbjct: 301 VALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKV 360

Query: 431 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL 490
           EK+ D+ SITLNKN+V GD SAL PGG+RIG+PAMT+RG  EK+F  + +F+   V +TL
Sbjct: 361 EKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLSRAVTLTL 420

Query: 491 DAKPLAPGSKLQEFLK-FVTTSDFPLIDRVSDLRSRVEALTTQFPIPG 528
           D +    G  L++F K  V   D      +  L++ VE  +  + +PG
Sbjct: 421 DIQK-TYGKLLKDFNKGLVNNKD------LDQLKADVEKFSASYEMPG 461

[Close]

BLAST of Carg11407 vs. TAIR10
Match: AT4G13890.1 (Pyridoxal phosphate (PLP)-dependent transferases superfamily protein)

HSP 1 Score: 532.7 bits (1371), Expect = 2.5e-151
Identity = 259/467 (55.46%), Postives = 335/467 (71.73%), Query Frame = 0


Query: 71  IEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYS 130
           +E V  + +  L+ +DPE+  +I+KEK RQ + +ELIA+ENFTS AVMEA+GSCLTNKYS
Sbjct: 1   MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYS 60

Query: 131 EGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPANFEVYTAILNP 190
           EG+PG RYYGG E IDE+E+LC+ R+L AF  +  KWGVNVQP SGSPANF  YTA+L P
Sbjct: 61  EGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 191 HDRIMGLDLPHGGHLSHGFMTP-KRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLF 250
           HDRIMGLDLP GGH++HG+ +   + +S TSIYFE++PY++D  TG +DYD LE+ A  F
Sbjct: 121 HDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDF 180

Query: 251 RPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTT 310
           RPKLII G ++YPR++DY R R +AD VGAFL+ DMAH S LVAA   ADPFEYCD+VTT
Sbjct: 181 RPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTT 240

Query: 311 TTHKSLRGPRGGMIFFRKDPVLG---------VDLESAINNAVFPGLQGGPHNHTIGGLA 370
           +THKSLRGPR GMIF+RK P             D ++ IN+AVFP LQ GPHN+ IG LA
Sbjct: 241 STHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALA 300

Query: 371 VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV 430
           V LK   +P FKVY  +V +N   LAS LI  GY LV+ G+DNHL+L DLRPLG+ G +V
Sbjct: 301 VALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKV 360

Query: 431 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL 490
           EK+ ++  ITLN+N+V GD S L PGG+RIG+PAMT+RG  EK+F  + +F+H  V ITL
Sbjct: 361 EKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITL 420

Query: 491 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPG 528
           D +    G  +++F K +  +       + ++++ VE  T  F +PG
Sbjct: 421 DIQE-QYGKVMKDFNKGLVNN-----KEIDEIKADVEEFTYDFDMPG 461

[Close]

BLAST of Carg11407 vs. Swiss-Prot
Match: sp|Q94JQ3|GLYP3_ARATH (Serine hydroxymethyltransferase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SHM3 PE=1 SV=2)

HSP 1 Score: 839.3 bits (2167), Expect = 2.3e-242
Identity = 419/531 (78.91%), Postives = 468/531 (88.14%), Query Frame = 0


Query: 1   MQAAGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60
           MQA  G   M SLQ     +GS FP     +  F Q  + NI K  +SS ++ ++V+  +
Sbjct: 1   MQACCGGNSMASLQQPGRVQGSVFPPIMPPVTKFSQQLKFNISKPFRSSFLKRNLVSEMR 60

Query: 61  SSSLSVTVPDIEGVS---DFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAV 120
           +S  SV++P++E  S    F D+GL E+DPEV++II KEK+RQF+SLELIASENFTSRAV
Sbjct: 61  AS--SVSLPNVEISSKEIPFEDYGLGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAV 120

Query: 121 MEAVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGS 180
           MEAVGSCLTNKYSEGLPGKRYYGGNE+ID+LETLCQ RALAAFRLD+ KWGVNVQPLSGS
Sbjct: 121 MEAVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGS 180

Query: 181 PANFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIV 240
           PANF VYTAIL+PHDRIMGLDLPHGGHLSHGFMT KRRVSGTSIYFESMPYRLDE+TGIV
Sbjct: 181 PANFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIV 240

Query: 241 DYDMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVV 300
           DYDMLEKTA LFRPKLIIAGASAY RDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVV
Sbjct: 241 DYDMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVV 300

Query: 301 ADPFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIG 360
           ADPFEYCDIVTTTTHKSLRGPRGGMIFFRKDP+ GVDLESA+NNAVFPGLQGGPHNHTIG
Sbjct: 301 ADPFEYCDIVTTTTHKSLRGPRGGMIFFRKDPINGVDLESAVNNAVFPGLQGGPHNHTIG 360

Query: 361 GLAVCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDG 420
           GLAVCLKHAQSPEFK YQ +V+SNCRALA+RL+ELG+KLVSGGSDNHLVLVDLRP+G+DG
Sbjct: 361 GLAVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDG 420

Query: 421 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVK 480
           ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG +EK+F+ VADFI EGV+
Sbjct: 421 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVE 480

Query: 481 ITLDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           IT++AK  APGSKLQ+F KFVT+ +FPL +RV  L+ RVE  T++FPIPG+
Sbjct: 481 ITMEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPGV 529

[Close]

BLAST of Carg11407 vs. Swiss-Prot
Match: sp|Q9SZJ5|GLYM1_ARATH (Serine hydroxymethyltransferase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SHM1 PE=1 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 5.6e-164
Identity = 280/454 (61.67%), Postives = 345/454 (75.99%), Query Frame = 0


Query: 82  LNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 141
           L E+DPE+  II+ EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGG
Sbjct: 55  LEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 114

Query: 142 NEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPANFEVYTAILNPHDRIMGLDLPH 201
           NE+ID  ETLCQ+RAL AFRLD  KWGVNVQPLSGSPANF VYTA+L PH+RIM LDLPH
Sbjct: 115 NEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPH 174

Query: 202 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLFRPKLIIAGASAY 261
           GGHLSHG+ T  +++S  SI+FE+MPYRLDE+TG +DYD +EK+A LFRPKLI+AGASAY
Sbjct: 175 GGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAY 234

Query: 262 PRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGG 321
            R +DY R+RK+ +   A ++ DMAHISGLVAA+V+  PF+Y D+VTTTTHKSLRGPRG 
Sbjct: 235 ARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGA 294

Query: 322 MIFFRK--------DPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 381
           MIFFRK           +  D E  IN AVFPGLQGGPHNHTI GLAV LK A + E+K 
Sbjct: 295 MIFFRKGVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKA 354

Query: 382 YQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMASITLNK 441
           YQ +V+SN    A  L+E GY+LVSGG+DNHLVLV+L+P GIDG+RVEK+L+   I  NK
Sbjct: 355 YQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNK 414

Query: 442 NSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITLDAKPLAPGSKLQE 501
           N+VPGD SA+VPGGIR+G+PA+T+RGF E++F  VA++  + V I L  K  A G+KL++
Sbjct: 415 NTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKD 474

Query: 502 FLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPG 528
           F+  + +S   +   ++ LR  VE    QFP  G
Sbjct: 475 FVSAMESSS-TIQSEIAKLRHEVEEFAKQFPTIG 507

[Close]

BLAST of Carg11407 vs. Swiss-Prot
Match: sp|P34899|GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum OX=3888 PE=1 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 3.6e-163
Identity = 290/506 (57.31%), Postives = 363/506 (71.74%), Query Frame = 0


Query: 40  MNILKLRKSSNVEASMVAGKQSSSLSVTVPDIEGVSD----------FVDHGLNEMDPEV 99
           M + KL  S N  +  +    S     ++PD E V D           ++  L  +DPE+
Sbjct: 5   MALRKLSSSVNKSSRPLFSASSLYYKSSLPD-EAVYDKENPRVTWPKQLNSPLEVIDPEI 64

Query: 100 QSIIKKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEHIDELE 159
             II+ EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNE+ID  E
Sbjct: 65  ADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 124

Query: 160 TLCQQRALAAFRLDNNKWGVNVQPLSGSPANFEVYTAILNPHDRIMGLDLPHGGHLSHGF 219
           TLCQ+RAL AFRLD  KWGVNVQPLSGSP+NF+VYTA+L PHDRIM LDLPHGGHLSHG+
Sbjct: 125 TLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGY 184

Query: 220 MTPKRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLFRPKLIIAGASAYPRDFDYPR 279
            T  +++S  SI+FE+MPYRLDE+TG +DYD LEK+A LFRPKLI+AGASAY R +DY R
Sbjct: 185 QTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYAR 244

Query: 280 MRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGMIFFRK-- 339
           +RK+ D   A L+ DMAHISGLVAA V+  PF+Y D+VTTTTHKSLRGPRG MIFFRK  
Sbjct: 245 IRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGL 304

Query: 340 ------DPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVISN 399
                    +  D E  IN AVFPGLQGGPHNHTI GLAV LK A +PE++ YQ +V+SN
Sbjct: 305 KEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSN 364

Query: 400 CRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMASITLNKNSVPGDKS 459
               A  L E GY LVSGG++NHLVLV+L+  GIDG+RVEK+L++  I  NKN+VPGD S
Sbjct: 365 SSKFAKALSEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVS 424

Query: 460 ALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITLDAKPLAPGSKLQEFLKFVTTS 519
           A+VPGGIR+G+PA+T+RGF E++F+ VA++    V + L  K  + G+KL++F++ + TS
Sbjct: 425 AMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTS 484

Query: 520 DFPLIDRVSDLRSRVEALTTQFPIPG 528
            + +   +S L+  VE    QFP  G
Sbjct: 485 SY-VQSEISKLKHDVEEFAKQFPTIG 508

[Close]

BLAST of Carg11407 vs. Swiss-Prot
Match: sp|P50433|GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 4.7e-163
Identity = 280/454 (61.67%), Postives = 344/454 (75.77%), Query Frame = 0


Query: 82  LNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 141
           L  +DPE+  II+ EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGG
Sbjct: 56  LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 115

Query: 142 NEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPANFEVYTAILNPHDRIMGLDLPH 201
           NE+ID  ETLCQ+RAL AFRLD  KWGVNVQPLSGSPANF+VYTA+L PH+RIM LDLPH
Sbjct: 116 NEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIMALDLPH 175

Query: 202 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLFRPKLIIAGASAY 261
           GGHLSHG+ T  +++S  SI+FE+MPYRLDE+TG +DYD LEK+A LFRPKLI+AGASAY
Sbjct: 176 GGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAY 235

Query: 262 PRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGG 321
            R +DY R+RK+ +   A L+ DMAHISGLVAA V+  PF+Y D+VTTTTHKSLRGPRG 
Sbjct: 236 ARLYDYDRIRKVCNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGA 295

Query: 322 MIFFRK--------DPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 381
           MIF+RK           +  D E  IN AVFPGLQGGPHNHTI GLAV LK A +PE++ 
Sbjct: 296 MIFYRKGVKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRA 355

Query: 382 YQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMASITLNK 441
           YQ +V+SN    A  L E GY+LVSGG+DNHLVLV+++  GIDG+RVEK+L+   I  NK
Sbjct: 356 YQEQVLSNSSKFAQALGEKGYELVSGGTDNHLVLVNMKNKGIDGSRVEKVLEAVHIAANK 415

Query: 442 NSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITLDAKPLAPGSKLQE 501
           N+VPGD SA+VPGGIR+G+PA+T+RGF E++F+ VADF    VKI +  K    G+KL++
Sbjct: 416 NTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGTKLKD 475

Query: 502 FLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPG 528
           F+  + +S  P+   ++ LR  VE    QFP  G
Sbjct: 476 FVATLESS-APIKSEIAKLRHDVEEYAKQFPTIG 508

[Close]

BLAST of Carg11407 vs. Swiss-Prot
Match: sp|P07511|GLYC_RABIT (Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus OX=9986 GN=SHMT1 PE=1 SV=2)

HSP 1 Score: 575.1 bits (1481), Expect = 8.0e-163
Identity = 284/457 (62.14%), Postives = 341/457 (74.62%), Query Frame = 0


Query: 82  LNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 141
           L + D EV  IIKKE  RQ   LELIASENF SRAV+EA+GSCL NKYSEG PG+RYYGG
Sbjct: 26  LKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGG 85

Query: 142 NEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPANFEVYTAILNPHDRIMGLDLPH 201
            EHIDELETLCQ+RAL A+ LD   WGVNVQP SGSPANF VYTA++ PH RIMGLDLP 
Sbjct: 86  TEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPD 145

Query: 202 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLFRPKLIIAGASAY 261
           GGHL+HGFMT K+++S TSI+FESM Y+++  TG +DYD LE+ A LF PKLIIAG S Y
Sbjct: 146 GGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGTSCY 205

Query: 262 PRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGG 321
            R+ DY R+RKIAD  GA+LM DMAHISGLV A VV  PFE+C +VTTTTHK+LRG R G
Sbjct: 206 SRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRAG 265

Query: 322 MIFFRK-----DPVLG----VDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 381
           MIF+R+     DP  G     +LES IN+AVFPGLQGGPHNH I G+AV LK A +PEFK
Sbjct: 266 MIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFK 325

Query: 382 VYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMASITLN 441
            YQ +V++NCRAL++ L+ELGYK+V+GGSDNHL+LVDLR  G DG R EK+L+  SI  N
Sbjct: 326 EYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACN 385

Query: 442 KNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITLDAK-PLAPGSKL 501
           KN+ PGDKSAL P G+R+G+PA+T+RG  EK+F  VA FIH G+++T+  +    P + L
Sbjct: 386 KNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDTGPRATL 445

Query: 502 QEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           +EF K     D      V  LR  VE+    FP+PGL
Sbjct: 446 KEF-KEKLAGDEKHQRAVRALRQEVESFAALFPLPGL 481

[Close]

BLAST of Carg11407 vs. TrEMBL
Match: tr|A0A0A0KYS6|A0A0A0KYS6_CUCSA (Serine hydroxymethyltransferase OS=Cucumis sativus OX=3659 GN=Csa_4G062380 PE=3 SV=1)

HSP 1 Score: 993.0 bits (2566), Expect = 2.5e-286
Identity = 491/528 (92.99%), Postives = 507/528 (96.02%), Query Frame = 0


Query: 1   MQAAGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60
           MQA  G A+MGSLQV VC KGSCFPSK   I VFPQ ++MNILK  KS  VEASMVAGK 
Sbjct: 1   MQATSGVAVMGSLQVAVCGKGSCFPSKSSSICVFPQQKKMNILKPCKSFKVEASMVAGKP 60

Query: 61  SSSLSVTVPDIEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEA 120
           SSS+SVTVP+I GVS+FVDH L+E DPEV+SII KEK+RQFKSLELIASENFTSRAVMEA
Sbjct: 61  SSSVSVTVPEIGGVSNFVDHALSETDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEA 120

Query: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN 180
           VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAF LDNNKWGVNVQPLSGSPAN
Sbjct: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPAN 180

Query: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240
           FEVYTA+LNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD
Sbjct: 181 FEVYTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240

Query: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADP 300
           MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIAD+VGAFLMMDMAHISGLVAASVVADP
Sbjct: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVADP 300

Query: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360
           FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA
Sbjct: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360

Query: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420
           VCLKHAQSPEFKVYQNKVI+NCRALA+RL+ELGYKLVSGGSDNHLVLVDLRPLGIDGARV
Sbjct: 361 VCLKHAQSPEFKVYQNKVIANCRALANRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420

Query: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL 480
           EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEF+AVADFIHEGVKITL
Sbjct: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITL 480

Query: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           DAKPLAPGSKLQEFLKFVTTSDFPL DR+SDLRSRVEALTTQFPIPGL
Sbjct: 481 DAKPLAPGSKLQEFLKFVTTSDFPLTDRISDLRSRVEALTTQFPIPGL 528

[Close]

BLAST of Carg11407 vs. TrEMBL
Match: tr|A0A1S3BSI5|A0A1S3BSI5_CUCME (Serine hydroxymethyltransferase OS=Cucumis melo OX=3656 GN=LOC103493017 PE=3 SV=1)

HSP 1 Score: 991.1 bits (2561), Expect = 9.5e-286
Identity = 491/528 (92.99%), Postives = 506/528 (95.83%), Query Frame = 0


Query: 1   MQAAGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60
           MQA  GAA+MGSL+V VC KGSCFPSK   I VFPQ+++MNILK  KSS V+ASMV GK 
Sbjct: 1   MQATSGAAVMGSLEVAVCGKGSCFPSKSSSICVFPQHKKMNILKPSKSSKVKASMVVGKP 60

Query: 61  SSSLSVTVPDIEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEA 120
           SSS SVTVP+I GVS FVDH L+E DPEV+SII KEK+RQFKSLELIASENFTSRAVMEA
Sbjct: 61  SSSASVTVPEIGGVSHFVDHALSETDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEA 120

Query: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN 180
           VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAF LDNNKWGVNVQPLSGSPAN
Sbjct: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPAN 180

Query: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240
           FEVYTA+LNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD
Sbjct: 181 FEVYTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240

Query: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADP 300
           MLE+TANLFRPKLIIAGASAYPRDFDYPRMRKIAD+VGAFLMMDMAHISGLVAASVVADP
Sbjct: 241 MLERTANLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVADP 300

Query: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360
           FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA
Sbjct: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360

Query: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420
           VCLKHAQSPEFKVYQNKVI+NCRALASRL+ELGYKLVSGGSDNHLVLVDLRPLGIDGARV
Sbjct: 361 VCLKHAQSPEFKVYQNKVIANCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420

Query: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL 480
           EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEF AVADFIHEGVKITL
Sbjct: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFAAVADFIHEGVKITL 480

Query: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           DAKPLAPGSKLQEFLKFVTTSDFPL DRVSDLRSRVEALTTQFPIPGL
Sbjct: 481 DAKPLAPGSKLQEFLKFVTTSDFPLTDRVSDLRSRVEALTTQFPIPGL 528

[Close]

BLAST of Carg11407 vs. TrEMBL
Match: tr|A0A1R3KGZ8|A0A1R3KGZ8_COCAP (Serine hydroxymethyltransferase OS=Corchorus capsularis OX=210143 GN=CCACVL1_01614 PE=3 SV=1)

HSP 1 Score: 899.8 bits (2324), Expect = 2.9e-258
Identity = 450/528 (85.23%), Postives = 482/528 (91.29%), Query Frame = 0


Query: 1   MQAAGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60
           MQA  GAAMMGSLQ  +      FP +G GI  FP   ++  +K  + + +E S+V G+ 
Sbjct: 1   MQACSGAAMMGSLQQPMGVNRPAFPLRGSGISGFPHQIKLISVKPCR-AQLEGSLVTGRP 60

Query: 61  SSSLSVTVPDIEGVSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVMEA 120
            SS+SV V +    S FVDHGL+E DPEV++II KEKERQFKSLELIASENFTSRAVMEA
Sbjct: 61  PSSVSVPVLE----SSFVDHGLSEADPEVRAIITKEKERQFKSLELIASENFTSRAVMEA 120

Query: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPAN 180
           VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQ+RALAAF LD  KWGVNVQPLSGSPAN
Sbjct: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQKRALAAFHLDETKWGVNVQPLSGSPAN 180

Query: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240
           FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE+TG+VDYD
Sbjct: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYD 240

Query: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADP 300
           MLEKTA LFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVV DP
Sbjct: 241 MLEKTATLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVGDP 300

Query: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360
           FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA
Sbjct: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360

Query: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420
           VCLKHAQSPEFK YQN+V+SNCRALAS+L+ELGYKLVSGGSDNHLVLVDLRPLGIDGARV
Sbjct: 361 VCLKHAQSPEFKTYQNQVVSNCRALASQLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420

Query: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKITL 480
           EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR FTEKEFIAVADFIHEGV+IT+
Sbjct: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRRFTEKEFIAVADFIHEGVQITI 480

Query: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           +AK LA G+KLQEFLKFVT+ DFPL+D+VS+LR+RVEALTTQFPIPG+
Sbjct: 481 EAKGLASGTKLQEFLKFVTSPDFPLMDKVSNLRNRVEALTTQFPIPGV 523

[Close]

BLAST of Carg11407 vs. TrEMBL
Match: tr|V4T4Q6|V4T4Q6_9ROSI (Serine hydroxymethyltransferase OS=Citrus clementina OX=85681 GN=CICLE_v10019689mg PE=3 SV=1)

HSP 1 Score: 895.6 bits (2313), Expect = 5.4e-257
Identity = 441/529 (83.36%), Postives = 484/529 (91.49%), Query Frame = 0


Query: 1   MQAAGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60
           MQA  GAA+MGSLQ  +  KGS FPS+G  +  FP   R+N++K  + S++E S+V G+ 
Sbjct: 1   MQACSGAAVMGSLQQPIWVKGSRFPSEGSVMVGFPNQIRLNVVKPCRCSSIEGSLVTGRP 60

Query: 61  SSSLSVTVPDIEG-VSDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVME 120
            SS+SV +P+I G  S FVD+ L E DPEV  II KEKERQFKSLELIASENFTSRAVME
Sbjct: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RALAAF LD NKWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDY 240
           NFEVYTAIL PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE+TG+V+Y
Sbjct: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVNY 240

Query: 241 DMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAYPRDFDYPRMR+IAD+VGAFLMMDMAHISGLVAASVVAD
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGAFLMMDMAHISGLVAASVVAD 300

Query: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCD+VTTTTHKSLRGPRGGMIFF+KDPVLGV+LESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGAR 420
           AVCLKH QSPEFKVYQNKV+SNCRALASRL+ELGYKLVSGGSDNHLVLVDLRP+GIDGAR
Sbjct: 361 AVCLKHVQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKIT 480
           VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF+EKEF+A+ADFIHEGV+IT
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480

Query: 481 LDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           L+AK L  GSKLQ+F+ FVT+ +F L++ V+DLR RVEALTTQFPIPG+
Sbjct: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529

[Close]

BLAST of Carg11407 vs. TrEMBL
Match: tr|A0A2N9F760|A0A2N9F760_FAGSY (Serine hydroxymethyltransferase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10874 PE=3 SV=1)

HSP 1 Score: 894.8 bits (2311), Expect = 9.3e-257
Identity = 446/529 (84.31%), Postives = 479/529 (90.55%), Query Frame = 0


Query: 1    MQAAGGAAMMGSLQVVVCAKGSCFPSKGYGIRVFPQNRRMNILKLRKSSNVEASMVAGKQ 60
            MQA  GAA+MGSLQ  +  KGS FP KG  +  FP   R+++LK  +SS VE S+V G  
Sbjct: 475  MQACSGAAVMGSLQQPIWIKGSNFPPKGSSVIGFPHQGRLSLLKPCRSS-VEGSLVTGGL 534

Query: 61   SSSLSVTVPDIEGV-SDFVDHGLNEMDPEVQSIIKKEKERQFKSLELIASENFTSRAVME 120
             SS+SV VP+I G  S F+D+GL E DPEV++II KEKERQFKSLELIASENFTSRAVME
Sbjct: 535  PSSVSVPVPEIGGSGSSFLDYGLTEADPEVRTIIDKEKERQFKSLELIASENFTSRAVME 594

Query: 121  AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFRLDNNKWGVNVQPLSGSPA 180
            AVGSCLTNKYSEGLPGKRYYGGNEHIDELE LCQQRALAAF LD  KWGVNVQPLSGSPA
Sbjct: 595  AVGSCLTNKYSEGLPGKRYYGGNEHIDELEILCQQRALAAFHLDGKKWGVNVQPLSGSPA 654

Query: 181  NFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDY 240
            NFEVYTA+L PHDRIMGLDLPHGGHLSHGFMT KRRVSGTSIYFESMPYRLDE+TGIVDY
Sbjct: 655  NFEVYTAVLKPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDY 714

Query: 241  DMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVAD 300
            DMLEKTA LFRPKLIIAGASAYPRDFDY RMRKIAD+VGAFLMMDMAHISGLVA SVVAD
Sbjct: 715  DMLEKTAVLFRPKLIIAGASAYPRDFDYARMRKIADAVGAFLMMDMAHISGLVATSVVAD 774

Query: 301  PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 360
            PFEYCDIVTTTTHKSLRGPRGGMIFF+KDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 775  PFEYCDIVTTTTHKSLRGPRGGMIFFKKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 834

Query: 361  AVCLKHAQSPEFKVYQNKVISNCRALASRLIELGYKLVSGGSDNHLVLVDLRPLGIDGAR 420
            AVCLK+AQSPEFK YQNKV+SNCRALASRL ELGY LVSGGSDNHLVLVDLRPLGIDGAR
Sbjct: 835  AVCLKYAQSPEFKAYQNKVVSNCRALASRLTELGYTLVSGGSDNHLVLVDLRPLGIDGAR 894

Query: 421  VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFIAVADFIHEGVKIT 480
             EKILD+ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEK+F+A+ADFIHEGVKIT
Sbjct: 895  AEKILDLASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKDFVAIADFIHEGVKIT 954

Query: 481  LDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
            L+AK L  GSKLQ+F+KF+ + DFPL+D++SDLR RVEALTTQFP+PGL
Sbjct: 955  LEAKRLVSGSKLQDFMKFLASPDFPLLDKLSDLRGRVEALTTQFPLPGL 1002

The following BLAST results are available for this feature:

BLAST of Carg11407 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521537.1	1.1e-304	99.62	serine hydroxymethyltransferase 3, chloroplastic-like [Cucurbita pepo subsp. pep...	[more]
XP_022985017.1	1.8e-304	99.43	serine hydroxymethyltransferase 3, chloroplastic-like [Cucurbita maxima]	[more]
XP_022931520.1	9.0e-304	99.05	serine hydroxymethyltransferase 3, chloroplastic-like [Cucurbita moschata]	[more]
XP_011653260.1	3.8e-286	92.99	PREDICTED: serine hydroxymethyltransferase 3, chloroplastic [Cucumis sativus] >K...	[more]
XP_008451853.1	1.4e-285	92.99	PREDICTED: serine hydroxymethyltransferase 3, chloroplastic [Cucumis melo]	[more]

BLAST of Carg11407 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32520.1	1.3e-243	78.91	serine hydroxymethyltransferase 3	[more]
AT4G37930.1	3.1e-165	61.67	serine transhydroxymethyltransferase 1	[more]
AT5G26780.3	6.0e-161	59.57	serine hydroxymethyltransferase 2	[more]
AT4G13930.1	8.4e-155	58.33	serine hydroxymethyltransferase 4	[more]
AT4G13890.1	2.5e-151	55.46	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein	[more]

BLAST of Carg11407 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94JQ3\|GLYP3_ARATH	2.3e-242	78.91	Serine hydroxymethyltransferase 3, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q9SZJ5\|GLYM1_ARATH	5.6e-164	61.67	Serine hydroxymethyltransferase 1, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
sp\|P34899\|GLYM_PEA	3.6e-163	57.31	Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum OX=3888 PE=1 SV=...	[more]
sp\|P50433\|GLYM_SOLTU	4.7e-163	61.67	Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum OX=4113 PE=2...	[more]
sp\|P07511\|GLYC_RABIT	8.0e-163	62.14	Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus OX=9986 GN=S...	[more]

BLAST of Carg11407 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KYS6\|A0A0A0KYS6_CUCSA	2.5e-286	92.99	Serine hydroxymethyltransferase OS=Cucumis sativus OX=3659 GN=Csa_4G062380 PE=3 ...	[more]
tr\|A0A1S3BSI5\|A0A1S3BSI5_CUCME	9.5e-286	92.99	Serine hydroxymethyltransferase OS=Cucumis melo OX=3656 GN=LOC103493017 PE=3 SV=...	[more]
tr\|A0A1R3KGZ8\|A0A1R3KGZ8_COCAP	2.9e-258	85.23	Serine hydroxymethyltransferase OS=Corchorus capsularis OX=210143 GN=CCACVL1_016...	[more]
tr\|V4T4Q6\|V4T4Q6_9ROSI	5.4e-257	83.36	Serine hydroxymethyltransferase OS=Citrus clementina OX=85681 GN=CICLE_v10019689...	[more]
tr\|A0A2N9F760\|A0A2N9F760_FAGSY	9.3e-257	84.31	Serine hydroxymethyltransferase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10874 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0035999	tetrahydrofolate interconversion
GO:0019264	glycine biosynthetic process from serine

Vocabulary: **Molecular Function**
Term	Definition
GO:0030170	pyridoxal phosphate binding
GO:0004372	glycine hydroxymethyltransferase activity
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR015424	PyrdxlP-dep_Trfase
IPR019798	Ser_HO-MeTrfase_PLP_BS
IPR001085	Ser_HO-MeTrfase
IPR015421	PyrdxlP-dep_Trfase_major
IPR015422	PyrdxlP-dep_Trfase_dom1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019264	glycine biosynthetic process from serine
biological_process	GO:0035999	tetrahydrofolate interconversion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004372	glycine hydroxymethyltransferase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11407-RA	Carg11407-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015422	Pyridoxal phosphate-dependent transferase domain 1	GENE3D	G3DSA:3.90.1150.10		coord: 86..110 e-value: 6.5E-215 score: 715.6 coord: 377..526 e-value: 6.5E-215 score: 715.6
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	G3DSA:3.40.640.10		coord: 111..376 e-value: 6.5E-215 score: 715.6
None	No IPR available	PFAM	PF00464	SHMT	coord: 82..472 e-value: 5.3E-193 score: 641.0
None	No IPR available	PANTHER	PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	coord: 34..528
None	No IPR available	PANTHER	PTHR11680:SF20	SERINE HYDROXYMETHYLTRANSFERASE 3, CHLOROPLASTIC	coord: 34..528
IPR001085	Serine hydroxymethyltransferase	PIRSF	PIRSF000412	SHMT	coord: 68..528 e-value: 1.9E-174 score: 578.1
IPR001085	Serine hydroxymethyltransferase	HAMAP	MF_00051	SHMT	coord: 81..527 score: 44.141
IPR001085	Serine hydroxymethyltransferase	CDD	cd00378	SHMT	coord: 84..486 e-value: 0.0 score: 650.804
IPR019798	Serine hydroxymethyltransferase, pyridoxal phosphate binding site	PROSITE	PS00096	SHMT	coord: 305..321
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	SSF53383	PLP-dependent transferases	coord: 76..527

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11407	Csa4G062380	Cucumber (Chinese Long) v2	carcuB0677
Carg11407	MELO3C016197	Melon (DHL92) v3.5.1	carmeB0652
Carg11407	ClCG07G010870	Watermelon (Charleston Gray)	carwcgB0637
Carg11407	CSPI04G07200	Wild cucumber (PI 183967)	carcpiB0687
Carg11407	Cucsa.179980	Cucumber (Gy14) v1	carcgyB0732
Carg11407	CmaCh16G004840	Cucurbita maxima (Rimu)	carcmaB0924
Carg11407	CmoCh16G005250	Cucurbita moschata (Rifu)	carcmoB0898
Carg11407	Lsi07G008040	Bottle gourd (USVL1VR-Ls)	carlsiB596
Carg11407	CsGy4G007100	Cucumber (Gy14) v2	carcgybB0652
Carg11407	MELO3C016197.2	Melon (DHL92) v3.6.1	carmedB0662
Carg11407	CsaV3_4G007440	Cucumber (Chinese Long) v3	carcucB0689
Carg11407	Cla97C07G137610	Watermelon (97103) v2	carwmbB0682
Carg11407	Bhi01G002386	Wax gourd	carwgoB0770

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11407	Carg13128	Silver-seed gourd	carcarB050

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11407	Silver-seed gourd	carcarB052
Carg11407	Cucurbita maxima (Rimu)	carcmaB0927
Carg11407	Cucurbita moschata (Rifu)	carcmoB0902
Carg11407	Cucurbita pepo (Zucchini)	carcpeB0926
Carg11407	Cucurbita pepo (Zucchini)	carcpeB0929
Carg11407	Watermelon (97103) v1	carwmB0652