Carg11170 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11170
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Unknown protein
Location	Cucurbita_argyrosperma_scaffold_013 : 309686 .. 311773 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGCAATTTCAGATCTGAAAGAGATCTCTCTCAATTTTCTTCTCTCGCAATTTCAGATCTGAAAGAGATCTGAAAGAAATGGGTTCTCTCTCATTTCACGATCTGGGTTCATATCCTCAGTTTTATTGTTATTGTTTTTTAGTCCCTCTGATCTCTTTTCCGGCTTTTTCTTGTTTGTTCATGTTCCAGTTCGATCCCTTCATGGATTCTAGCTTGAAAATGCCGGAATTGGCTTCTTCTTATTGATTTACTGTTTGTCGGTGAGTTTTTCTTTCTCTCCTGAAGAGTAAAATAACAATAATTGTAGAAAAAAATGGTCCAATCCCCTACCCTTTTCCTCCTACTGCAAATGTTCTTCATTATGATGAGTACGGTGTTTCCTTTGTATGCTCTGTTGTCTGGTTTTAATGAAATCAGGTGGAGAAACGAACTCCACTCCTTATTTCATTCATTTTCTGATTTTCATTTGTCGTTCGTGAAAGAGAACTGAAAAAATGGGGTGGGGATAGGGGGAATTCCTTATTTAATTCAATTTGTGCTTTTCCTTGTGCTTCTATCTAGTCATTGTGGTTAATACTATCGATGTAAATTTGACTGGACAGGCTTATTACTTAAGTTTTGATTAAGTTTGTGTGATGGGATTAGTAACTAATAGATAATGGCCATGTCATAGCAACGTTCTTGAATGTTGTTATGGTATGGGAGGACAAAGAAGTATGATTCGAAGTTTAAGGATGTCATTGGCATTTTATAAAGTTTAGGATGTAAATGAACTGAACAAAATGCTCAAAGTTTATGGTTACAATTTTCCGTGTATAGAAATGTGTTTAAAGTTATTTTGGGTTTATTTTTCATAAAAGGATTCTCAGAAGTGTTAAGAAGATGAGAAGAAAAGAAGACCCCTTTGATTCAGGATCCTGGTAGAATGAATGCCCTGCTGAAATGGAAATTAGAACTTCTTTAGATGGGCAGTTTAGATTATATGGCTACAGAAGATAGAGAGTTTGAAATAGATCTTGAAGGTGGTGGTTATACTAGCGAAGATGATTTGAGCAGTGAAACTGACTCAACATCCAAGACGCATGCTAGAAAAACTTTTAGCAGGCTTCGAAGCGGGGTTCTGTGTGCTGATGGATCTATAAATCGAAGTGGTAGCTTTGCTTCCAGTAGTGATTCCACCAAGCTTGTTAAGCTAGGTGTTGATGAGAATGTGCAGTTGTTGTTGGGCAGTTTAGAGGGAGAAAAGAGAAGAGAATTTGCAGCTCTTGTAGAGAAGAAGAAGAACGTGAAGGAGAAGATTAAGAAGGGAAAGGTTCACAAGCCACCACGACCTCCACGGGGTCCGTCGTTGGATGCTGCTGACAGGATATTTGTTAAAGAGATCGCCGAGTTGGCAGTGAAAAAACGTGCCACCGTTGAGCGAATAAAAGCTTTGAAGAAGATGAAAGCAGAGAGAACATCTTCATCCAACAGCAGCTTACCTGCCTTATTTATCACATTGCTTTTCTTTGTAATCATTATCTTTCAAGGTATGGGGTAGTTCAAATCATATTTTTCTGCAAATTTTCAATACTTTCATGACTGTACTTCTTTTTCCTTGTTTGGCATGGCTATTACGAACAATGCATTGATAGTAAAAACCTTGTACACAATCAACCAAGGAGAGTTTGAGATACCCTTTCACCTTCAAATTTACTATAATTGCTAAAAGCTCTCAAATTCACATTGTGCCAAAAGGAGGATAGTTCTGAAGCATCTAATGTATTCTCATGTTTGTAAAAATCTCCTTGCAGGAATGAGTGCTATAGGCAGTGTAAGGGTATCGGAGTCTCCTGTGGCTTCCGGTGGTGGAAGCGCAGGCTTGATTGTTCAGAACTTGCCTCAATCCTCCCCTAACGTTAACGGAGCTCAATCCCATGTTCTCGAGTCAGTTTAGCTCAATCTTTATATGGTTCATTGTAGTAAACTCTTATGTTTGTGTGTCATTCATGTTAAATCCATTTCTCTGATGCAGTTTTGCAGGAAATCAAACTTCTGACCCTGCTACGATTGAAGGGAGCTCAGTGGAAGAGCTGAAGAACCATTGA

mRNA sequence

CCCGCAATTTCAGATCTGAAAGAGATCTCTCTCAATTTTCTTCTCTCGCAATTTCAGATCTGAAAGAGATCTGAAAGAAATGGGTTCTCTCTCATTTCACGATCTGGGTTCATATCCTCAGTTTTATTGTTATTGTTTTTTAGTCCCTCTGATCTCTTTTCCGGCTTTTTCTTGTTTGTTCATGTTCCAGTTCGATCCCTTCATGGATTCTAGCTTGAAAATGCCGGAATTGGCTTCTTCTTATTGATTTACTGTTTGTCGGATTCTCAGAAGTGTTAAGAAGATGAGAAGAAAAGAAGACCCCTTTGATTCAGGATCCTGGTAGAATGAATGCCCTGCTGAAATGGAAATTAGAACTTCTTTAGATGGGCAGTTTAGATTATATGGCTACAGAAGATAGAGAGTTTGAAATAGATCTTGAAGGTGGTGGTTATACTAGCGAAGATGATTTGAGCAGTGAAACTGACTCAACATCCAAGACGCATGCTAGAAAAACTTTTAGCAGGCTTCGAAGCGGGGTTCTGTGTGCTGATGGATCTATAAATCGAAGTGGTAGCTTTGCTTCCAGTAGTGATTCCACCAAGCTTGTTAAGCTAGGTGTTGATGAGAATGTGCAGTTGTTGTTGGGCAGTTTAGAGGGAGAAAAGAGAAGAGAATTTGCAGCTCTTGTAGAGAAGAAGAAGAACGTGAAGGAGAAGATTAAGAAGGGAAAGGTTCACAAGCCACCACGACCTCCACGGGGTCCGTCGTTGGATGCTGCTGACAGGATATTTGTTAAAGAGATCGCCGAGTTGGCAGTGAAAAAACGTGCCACCGTTGAGCGAATAAAAGCTTTGAAGAAGATGAAAGCAGAGAGAACATCTTCATCCAACAGCAGCTTACCTGCCTTATTTATCACATTGCTTTTCTTTGTAATCATTATCTTTCAAGGAATGAGTGCTATAGGCAGTGTAAGGGTATCGGAGTCTCCTGTGGCTTCCGGTGGTGGAAGCGCAGGCTTGATTGTTCAGAACTTGCCTCAATCCTCCCCTAACGTTAACGGAGCTCAATCCCATGTTCTCGATTTTGCAGGAAATCAAACTTCTGACCCTGCTACGATTGAAGGGAGCTCAGTGGAAGAGCTGAAGAACCATTGA

Coding sequence (CDS)

ATGGGCAGTTTAGATTATATGGCTACAGAAGATAGAGAGTTTGAAATAGATCTTGAAGGTGGTGGTTATACTAGCGAAGATGATTTGAGCAGTGAAACTGACTCAACATCCAAGACGCATGCTAGAAAAACTTTTAGCAGGCTTCGAAGCGGGGTTCTGTGTGCTGATGGATCTATAAATCGAAGTGGTAGCTTTGCTTCCAGTAGTGATTCCACCAAGCTTGTTAAGCTAGGTGTTGATGAGAATGTGCAGTTGTTGTTGGGCAGTTTAGAGGGAGAAAAGAGAAGAGAATTTGCAGCTCTTGTAGAGAAGAAGAAGAACGTGAAGGAGAAGATTAAGAAGGGAAAGGTTCACAAGCCACCACGACCTCCACGGGGTCCGTCGTTGGATGCTGCTGACAGGATATTTGTTAAAGAGATCGCCGAGTTGGCAGTGAAAAAACGTGCCACCGTTGAGCGAATAAAAGCTTTGAAGAAGATGAAAGCAGAGAGAACATCTTCATCCAACAGCAGCTTACCTGCCTTATTTATCACATTGCTTTTCTTTGTAATCATTATCTTTCAAGGAATGAGTGCTATAGGCAGTGTAAGGGTATCGGAGTCTCCTGTGGCTTCCGGTGGTGGAAGCGCAGGCTTGATTGTTCAGAACTTGCCTCAATCCTCCCCTAACGTTAACGGAGCTCAATCCCATGTTCTCGATTTTGCAGGAAATCAAACTTCTGACCCTGCTACGATTGAAGGGAGCTCAGTGGAAGAGCTGAAGAACCATTGA

Protein sequence

MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSKTHARKTFSRLRSGVLCADGSINRSGSFASSSDSTKLVKLGVDENVQLLLGSLEGEKRREFAALVEKKKNVKEKIKKGKVHKPPRPPRGPSLDAADRIFVKEIAELAVKKRATVERIKALKKMKAERTSSSNSSLPALFITLLFFVIIIFQGMSAIGSVRVSESPVASGGGSAGLIVQNLPQSSPNVNGAQSHVLDFAGNQTSDPATIEGSSVEELKNH

Homology

[Close]

BLAST of Carg11170 vs. NCBI nr
Match: XP_022983577.1 (uncharacterized protein LOC111482138 [Cucurbita maxima])

HSP 1 Score: 329.3 bits (843), Expect = 1.1e-86
Identity = 223/256 (87.11%), Postives = 225/256 (87.89%), Query Frame = 0


Query: 1   MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSKTHARKTFSRLRSGVLCADGSIN 60
           MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSK HARKTFSRLRSGVLCADGSIN
Sbjct: 1   MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSKMHARKTFSRLRSGVLCADGSIN 60

Query: 61  RSGSFASSSDSTKLVKLGVDENVQLLLGSLEGEKRREFAALVEKKKNVKEKIKKXXXXXX 120
           RSGSFASSSDSTKLVKLGVDENVQLL+GSLEGEKRREFAALVEKKKNVKEKIK XXXXXX
Sbjct: 61  RSGSFASSSDSTKLVKLGVDENVQLLMGSLEGEKRREFAALVEKKKNVKEKIKXXXXXXX 120

Query: 121 XXXXXXXXXXXXXRIFVKEIAELAVKKRATVERIKALXXXXXXXXXXXXXSLPALFITLL 180
           XXXXXXXXXXXXX                        XXXXXXXXXXXXX   ALFITLL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFITLL 180

Query: 181 FFVIIIFQGMSAIGSVRVSESPVASGGGSAGLIVQNLPQSSPNVNGAQSHVLDFAGNQTS 240
           FFV+IIFQGMSAIGSVRV ESPVASGGGSAGLIVQNLPQSSPNVNGAQSHVLDFAGNQTS
Sbjct: 181 FFVVIIFQGMSAIGSVRVPESPVASGGGSAGLIVQNLPQSSPNVNGAQSHVLDFAGNQTS 240

Query: 241 DPATIEGSSVEELKNH 257
           DPATIE SSVEELKNH
Sbjct: 241 DPATIEESSVEELKNH 256

[Close]

BLAST of Carg11170 vs. NCBI nr
Match: XP_023527773.1 (uncharacterized protein LOC111790892 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.9 bits (842), Expect = 1.5e-86
Identity = 223/256 (87.11%), Postives = 225/256 (87.89%), Query Frame = 0


Query: 1   MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSKTHARKTFSRLRSGVLCADGSIN 60
           MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSKTHARKTFSRLRSGVLCADGSIN
Sbjct: 1   MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSKTHARKTFSRLRSGVLCADGSIN 60

Query: 61  RSGSFASSSDSTKLVKLGVDENVQLLLGSLEGEKRREFAALVEKKKNVKEKIKKXXXXXX 120
           RSGSFASSSDSTKLVKLGVDENVQLL+GSLEGEKRREFAALVEKKKNVKEKIK XXXXXX
Sbjct: 61  RSGSFASSSDSTKLVKLGVDENVQLLMGSLEGEKRREFAALVEKKKNVKEKIKXXXXXXX 120

Query: 121 XXXXXXXXXXXXXRIFVKEIAELAVKKRATVERIKALXXXXXXXXXXXXXSLPALFITLL 180
           XXXXXXXXXXXXX                        XXXXXXXXXXXXX    LFITLL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFITLL 180

Query: 181 FFVIIIFQGMSAIGSVRVSESPVASGGGSAGLIVQNLPQSSPNVNGAQSHVLDFAGNQTS 240
           FFVIIIFQGMSAIGSVRVSESPVASGGGSA LIVQNLPQSSPNVNGAQSHVL+FAGNQTS
Sbjct: 181 FFVIIIFQGMSAIGSVRVSESPVASGGGSASLIVQNLPQSSPNVNGAQSHVLNFAGNQTS 240

Query: 241 DPATIEGSSVEELKNH 257
           DPATIEG SVEELKNH
Sbjct: 241 DPATIEGRSVEELKNH 256

[Close]

BLAST of Carg11170 vs. NCBI nr
Match: XP_022934397.1 (uncharacterized protein LOC111441585 [Cucurbita moschata])

HSP 1 Score: 325.9 bits (834), Expect = 1.3e-85
Identity = 221/256 (86.33%), Postives = 224/256 (87.50%), Query Frame = 0


Query: 1   MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSKTHARKTFSRLRSGVLCADGSIN 60
           MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETD TSKTHARK FSRLRSGVLCADGSIN
Sbjct: 1   MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETDLTSKTHARKNFSRLRSGVLCADGSIN 60

Query: 61  RSGSFASSSDSTKLVKLGVDENVQLLLGSLEGEKRREFAALVEKKKNVKEKIKKXXXXXX 120
           R+GSFASSSDSTKLVKLGVDENVQLL+GSLEGEKRREFAALVEKKKNVKEKIK XXXXXX
Sbjct: 61  RNGSFASSSDSTKLVKLGVDENVQLLMGSLEGEKRREFAALVEKKKNVKEKIKXXXXXXX 120

Query: 121 XXXXXXXXXXXXXRIFVKEIAELAVKKRATVERIKALXXXXXXXXXXXXXSLPALFITLL 180
           XXXXXXXXXXXXX                        XXXXXXXXXXXXX    LFITLL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFITLL 180

Query: 181 FFVIIIFQGMSAIGSVRVSESPVASGGGSAGLIVQNLPQSSPNVNGAQSHVLDFAGNQTS 240
           FFVIIIFQGMSAIGSVRVSESPVASGGGSA LIVQNLPQSSPNVNGAQSHVLDFAGNQTS
Sbjct: 181 FFVIIIFQGMSAIGSVRVSESPVASGGGSASLIVQNLPQSSPNVNGAQSHVLDFAGNQTS 240

Query: 241 DPATIEGSSVEELKNH 257
           DPATIEGSSVEEL+NH
Sbjct: 241 DPATIEGSSVEELENH 256

[Close]

BLAST of Carg11170 vs. NCBI nr
Match: XP_008447470.1 (PREDICTED: uncharacterized protein LOC103489909 [Cucumis melo] >XP_008447471.1 PREDICTED: uncharacterized protein LOC103489909 [Cucumis melo])

HSP 1 Score: 283.1 bits (723), Expect = 9.4e-73
Identity = 193/263 (73.38%), Postives = 212/263 (80.61%), Query Frame = 0


Query: 1   MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSKTHARKTFSRLRSGVLCADGSIN 60
           MG+LD MAT+DREFEIDLEGGG TSEDDLSSETDSTSK HARKTF RLRSG L +D S++
Sbjct: 1   MGALDCMATKDREFEIDLEGGGNTSEDDLSSETDSTSKRHARKTFGRLRSGFLSSDRSVS 60

Query: 61  RSGSFASSSDSTKLVKLGVDENVQLLLGSLEGEKRREFAALVEKKKNVKEKIKK-XXXXX 120
           R+G+FASSS+STKLVKLGVD+NV+LL+ S +GEKRREF A  E K NVK KIKK      
Sbjct: 61  RTGTFASSSNSTKLVKLGVDDNVELLMESSDGEKRREFGAFAE-KNNVKGKIKKNGKVHK 120

Query: 121 XXXXXXXXXXXXXXRIFVKEIAELAVKKRATVERIKALXXXXXXXXXXXXXSLPALFITL 180
            XXXXXXXXXXX  RIFV+EIAELAVKKRATVERIKA XXXXXX       SLPALFITL
Sbjct: 121 PXXXXXXXXXXXADRIFVREIAELAVKKRATVERIKAXXXXXXXKASSFNSSLPALFITL 180

Query: 181 LFFVIIIFQGMSAIGS--VRVSESPVASGGGSAGLIVQNLP--QSSPNVNGAQSHVLDFA 240
           LFFV+IIFQGMSA GS  V VS+SP  S GG AGLIVQ+    QSSPNVN  +SH+L+FA
Sbjct: 181 LFFVVIIFQGMSAKGSTMVMVSDSPAPSVGGGAGLIVQHSVQFQSSPNVNEPESHILNFA 240

Query: 241 GNQTSDPATI--EGSSVEELKNH 257
           G QTSDPA    EGSSVEELKNH
Sbjct: 241 GKQTSDPAAAVQEGSSVEELKNH 262

[Close]

BLAST of Carg11170 vs. NCBI nr
Match: XP_004147994.1 (PREDICTED: uncharacterized protein LOC101214824 [Cucumis sativus] >XP_011651534.1 PREDICTED: uncharacterized protein LOC101214824 [Cucumis sativus] >KGN58129.1 hypothetical protein Csa_3G535620 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 1.2e-72
Identity = 183/263 (69.58%), Postives = 201/263 (76.43%), Query Frame = 0


Query: 1   MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSKTHARKTFSRLRSGVLCADGSIN 60
           MG++D MAT+DREFEIDLEGGG TSEDDLSSETDSTSK HARKTF RLRSG L +D S++
Sbjct: 1   MGAIDCMATKDREFEIDLEGGGNTSEDDLSSETDSTSKPHARKTFGRLRSGFLSSDRSVS 60

Query: 61  RSGSFASSSDSTKLVKLGVDENVQLLLGSLEGEKRREFAALVEKKKNVKEKIKK-XXXXX 120
           R+G FASSS+STKLVKLGVDENV+LL+ S +GEKRREF A  E K NVK KIKK      
Sbjct: 61  RTGIFASSSNSTKLVKLGVDENVELLMESSDGEKRREFGAFAE-KNNVKGKIKKNGKVHK 120

Query: 121 XXXXXXXXXXXXXXRIFVKEIAELAVKKRATVERIKALXXXXXXXXXXXXXSLPALFITL 180
             XXXXXX      RIFV+EIAELAVKKRATVERIKAL             SLPALFITL
Sbjct: 121 PPXXXXXXSLDAADRIFVREIAELAVKKRATVERIKALKKMKAEKTSSFNSSLPALFITL 180

Query: 181 LFFVIIIFQGMSAIGS--VRVSESPVASGGGSAGLIVQNLP--QSSPNVNGAQSHVLDFA 240
           LFFV+IIFQGMSA GS  V VS+SP  S GGSAGLIVQ+    QSSPNVN  +SH+L+FA
Sbjct: 181 LFFVVIIFQGMSAKGSTMVTVSDSPAPSVGGSAGLIVQHSLQFQSSPNVNEPESHILNFA 240

Query: 241 GNQTSDPATI--EGSSVEELKNH 257
           G QTSDPAT   E S VEELKNH
Sbjct: 241 GKQTSDPATAVREASLVEELKNH 262

[Close]

BLAST of Carg11170 vs. TrEMBL
Match: tr|A0A1S3BHI9|A0A1S3BHI9_CUCME (uncharacterized protein LOC103489909 OS=Cucumis melo OX=3656 GN=LOC103489909 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.2e-73
Identity = 193/263 (73.38%), Postives = 212/263 (80.61%), Query Frame = 0


Query: 1   MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSKTHARKTFSRLRSGVLCADGSIN 60
           MG+LD MAT+DREFEIDLEGGG TSEDDLSSETDSTSK HARKTF RLRSG L +D S++
Sbjct: 1   MGALDCMATKDREFEIDLEGGGNTSEDDLSSETDSTSKRHARKTFGRLRSGFLSSDRSVS 60

Query: 61  RSGSFASSSDSTKLVKLGVDENVQLLLGSLEGEKRREFAALVEKKKNVKEKIKK-XXXXX 120
           R+G+FASSS+STKLVKLGVD+NV+LL+ S +GEKRREF A  E K NVK KIKK      
Sbjct: 61  RTGTFASSSNSTKLVKLGVDDNVELLMESSDGEKRREFGAFAE-KNNVKGKIKKNGKVHK 120

Query: 121 XXXXXXXXXXXXXXRIFVKEIAELAVKKRATVERIKALXXXXXXXXXXXXXSLPALFITL 180
            XXXXXXXXXXX  RIFV+EIAELAVKKRATVERIKA XXXXXX       SLPALFITL
Sbjct: 121 PXXXXXXXXXXXADRIFVREIAELAVKKRATVERIKAXXXXXXXKASSFNSSLPALFITL 180

Query: 181 LFFVIIIFQGMSAIGS--VRVSESPVASGGGSAGLIVQNLP--QSSPNVNGAQSHVLDFA 240
           LFFV+IIFQGMSA GS  V VS+SP  S GG AGLIVQ+    QSSPNVN  +SH+L+FA
Sbjct: 181 LFFVVIIFQGMSAKGSTMVMVSDSPAPSVGGGAGLIVQHSVQFQSSPNVNEPESHILNFA 240

Query: 241 GNQTSDPATI--EGSSVEELKNH 257
           G QTSDPA    EGSSVEELKNH
Sbjct: 241 GKQTSDPAAAVQEGSSVEELKNH 262

[Close]

BLAST of Carg11170 vs. TrEMBL
Match: tr|A0A0A0LB07|A0A0A0LB07_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G535620 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 8.1e-73
Identity = 183/263 (69.58%), Postives = 201/263 (76.43%), Query Frame = 0


Query: 1   MGSLDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSKTHARKTFSRLRSGVLCADGSIN 60
           MG++D MAT+DREFEIDLEGGG TSEDDLSSETDSTSK HARKTF RLRSG L +D S++
Sbjct: 1   MGAIDCMATKDREFEIDLEGGGNTSEDDLSSETDSTSKPHARKTFGRLRSGFLSSDRSVS 60

Query: 61  RSGSFASSSDSTKLVKLGVDENVQLLLGSLEGEKRREFAALVEKKKNVKEKIKK-XXXXX 120
           R+G FASSS+STKLVKLGVDENV+LL+ S +GEKRREF A  E K NVK KIKK      
Sbjct: 61  RTGIFASSSNSTKLVKLGVDENVELLMESSDGEKRREFGAFAE-KNNVKGKIKKNGKVHK 120

Query: 121 XXXXXXXXXXXXXXRIFVKEIAELAVKKRATVERIKALXXXXXXXXXXXXXSLPALFITL 180
             XXXXXX      RIFV+EIAELAVKKRATVERIKAL             SLPALFITL
Sbjct: 121 PPXXXXXXSLDAADRIFVREIAELAVKKRATVERIKALKKMKAEKTSSFNSSLPALFITL 180

Query: 181 LFFVIIIFQGMSAIGS--VRVSESPVASGGGSAGLIVQNLP--QSSPNVNGAQSHVLDFA 240
           LFFV+IIFQGMSA GS  V VS+SP  S GGSAGLIVQ+    QSSPNVN  +SH+L+FA
Sbjct: 181 LFFVVIIFQGMSAKGSTMVTVSDSPAPSVGGSAGLIVQHSLQFQSSPNVNEPESHILNFA 240

Query: 241 GNQTSDPATI--EGSSVEELKNH 257
           G QTSDPAT   E S VEELKNH
Sbjct: 241 GKQTSDPATAVREASLVEELKNH 262

[Close]

BLAST of Carg11170 vs. TrEMBL
Match: tr|A0A1Q3CU15|A0A1Q3CU15_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_27121 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.5e-05
Identity = 46/114 (40.35%), Postives = 70/114 (61.40%), Query Frame = 0


Query: 4   LDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSKTHARKTF-SRLRSGV-LCADGSINR 63
           +DY+ +++RE E+DLE GG TSE+D + + +  ++T  RK F +R+  G+ L  DG +  
Sbjct: 1   MDYLVSKERELEVDLESGGTTSEEDRTDDPNLANRT--RKNFRNRIWGGIFLSFDGPVKV 60

Query: 64  SGSFASSSDSTKLVKLGVDENVQLLLG-SLEGEKRREFAALVEKKKNVKEKIKK 115
             S  S S S+  V+   DENV+LL+  S EGE   EF A V ++K+ + K KK
Sbjct: 61  ESSIDSCSSSSNFVE-AADENVELLIDKSSEGEGIPEFVA-VAQEKSAEGKRKK 110

[Close]

BLAST of Carg11170 vs. TrEMBL
Match: tr|A0A2N9IQQ6|A0A2N9IQQ6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54526 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.5e-05
Identity = 37/98 (37.76%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 7   MATEDREFEIDLEGGGYTSEDDLSSETDSTSKTHARKTFSRLRSGVLCADGSINRSGSFA 66
           MA+ ++++E D+E GG TSE++ S + DS SK   +K   R+  G+L  DGSI      +
Sbjct: 1   MASREKDYEFDIESGGMTSEEEASKDLDS-SKRQVKKILKRVSGGILNFDGSITCGFGVS 60

Query: 67  SSSDSTKLVKLGVDENVQLLLGSLEGEKRREFAALVEK 105
           SSS+  K   +  D+   L+  S +GE+ R   A+VEK
Sbjct: 61  SSSNMVKSGGVSDDDVELLIEKSSDGEESRVQMAVVEK 97

[Close]

BLAST of Carg11170 vs. TrEMBL
Match: tr|A0A251KRI2|A0A251KRI2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G013000 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-04
Identity = 90/243 (37.04%), Postives = 125/243 (51.44%), Query Frame = 0


Query: 4   LDYMATEDREFEIDLEGGGYTSEDDLSSETDSTSKTHARKTFSRLRSGVLCADGSINRSG 63
           +D+  + D E E+DLE GG TSE+D + +  S ++   +K  +   SG L  DG +  S 
Sbjct: 1   MDHSISRDSEHEVDLESGGTTSEEDGTYDLVSANR-QTKKLLNSDWSGPLSFDG-LGNSS 60

Query: 64  SFASSSDSTKLVKLGVDENVQLLLG-SLEGEKRREFAALVEKK--KNVKEKIKKXXXXXX 123
            F   +          DENV+ LL  + EGE   +    V KK  +        XXXXXX
Sbjct: 61  KFGGDA----------DENVEFLLDRNSEGEDGLQQIPFVNKKHLEXXXXXXXXXXXXXX 120

Query: 124 XXXXXXXXXXXXXRIFVKEIAELAVKKRATVERIKALXXXXXXXXXXXXXSLPALFITLL 183
           XXXXXXXXXXXXX     EI ELA++KRA +ERI+ L             +L A+  T++
Sbjct: 121 XXXXXXXXXXXXXXXXXXEITELAMRKRARIERIRVLKKMREAKSSSWNSTLYAMAFTVV 180

Query: 184 FFVIIIFQGMSA--IGSVRVSESPVASGGGSAGLI-VQNLPQSSPNVNGAQSHVLDFAGN 241
           FF+I++FQG+ +   GS+ +  SP  +   S  LI VQ    S+   +G  S     AG 
Sbjct: 181 FFLILVFQGICSRNSGSMYLGWSPEPAVTASEDLISVQFYKNSAYEGDGPGSSSPSLAGG 231

The following BLAST results are available for this feature:

BLAST of Carg11170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983577.1	1.1e-86	87.11	uncharacterized protein LOC111482138 [Cucurbita maxima]	[more]
XP_023527773.1	1.5e-86	87.11	uncharacterized protein LOC111790892 [Cucurbita pepo subsp. pepo]	[more]
XP_022934397.1	1.3e-85	86.33	uncharacterized protein LOC111441585 [Cucurbita moschata]	[more]
XP_008447470.1	9.4e-73	73.38	PREDICTED: uncharacterized protein LOC103489909 [Cucumis melo] >XP_008447471.1 P...	[more]
XP_004147994.1	1.2e-72	69.58	PREDICTED: uncharacterized protein LOC101214824 [Cucumis sativus] >XP_011651534....	[more]

BLAST of Carg11170 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg11170 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg11170 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BHI9\|A0A1S3BHI9_CUCME	6.2e-73	73.38	uncharacterized protein LOC103489909 OS=Cucumis melo OX=3656 GN=LOC103489909 PE=...	[more]
tr\|A0A0A0LB07\|A0A0A0LB07_CUCSA	8.1e-73	69.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G535620 PE=4 SV=1	[more]
tr\|A0A1Q3CU15\|A0A1Q3CU15_CEPFO	2.5e-05	40.35	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_27121 PE=4...	[more]
tr\|A0A2N9IQQ6\|A0A2N9IQQ6_FAGSY	5.5e-05	37.76	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54526 PE=4 SV=1	[more]
tr\|A0A251KRI2\|A0A251KRI2_MANES	1.6e-04	37.04	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G013000 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11170-RA	Carg11170-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..256
None	No IPR available	PANTHER	PTHR34188	FAMILY NOT NAMED	coord: 5..229
None	No IPR available	PANTHER	PTHR34188:SF1	SUBFAMILY NOT NAMED	coord: 5..229

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11170	Cla017342	Watermelon (97103) v1	carwmB0816
Carg11170	Cla015155	Watermelon (97103) v1	carwmB0815
Carg11170	Csa7G407830	Cucumber (Chinese Long) v2	carcuB0833
Carg11170	MELO3C012929	Melon (DHL92) v3.5.1	carmeB0812
Carg11170	MELO3C015909	Melon (DHL92) v3.5.1	carmeB0810
Carg11170	ClCG10G011600	Watermelon (Charleston Gray)	carwcgB0792
Carg11170	ClCG09G004940	Watermelon (Charleston Gray)	carwcgB0791
Carg11170	CSPI03G24980	Wild cucumber (PI 183967)	carcpiB0853
Carg11170	CSPI07G18300	Wild cucumber (PI 183967)	carcpiB0855
Carg11170	Cucsa.204910	Cucumber (Gy14) v1	carcgyB0932
Carg11170	Cucsa.300660	Cucumber (Gy14) v1	carcgyB0934
Carg11170	CmaCh08G004810	Cucurbita maxima (Rimu)	carcmaB1136
Carg11170	CmaCh14G009460	Cucurbita maxima (Rimu)	carcmaB1132
Carg11170	CmaCh01G002750	Cucurbita maxima (Rimu)	carcmaB1134
Carg11170	CmaCh17G010200	Cucurbita maxima (Rimu)	carcmaB1133
Carg11170	CmoCh01G002840	Cucurbita moschata (Rifu)	carcmoB1105
Carg11170	CmoCh17G009980	Cucurbita moschata (Rifu)	carcmoB1103
Carg11170	CmoCh14G009660	Cucurbita moschata (Rifu)	carcmoB1102
Carg11170	CmoCh08G004730	Cucurbita moschata (Rifu)	carcmoB1107
Carg11170	Lsi02G024910	Bottle gourd (USVL1VR-Ls)	carlsiB747
Carg11170	Lsi03G011280	Bottle gourd (USVL1VR-Ls)	carlsiB748
Carg11170	Cp4.1LG17g07640	Cucurbita pepo (Zucchini)	carcpeB1145
Carg11170	Cp4.1LG12g06180	Cucurbita pepo (Zucchini)	carcpeB1143
Carg11170	Cp4.1LG03g05100	Cucurbita pepo (Zucchini)	carcpeB1147
Carg11170	CsGy3G023530	Cucumber (Gy14) v2	carcgybB0805
Carg11170	CsGy7G016730	Cucumber (Gy14) v2	carcgybB0807
Carg11170	MELO3C012929.2	Melon (DHL92) v3.6.1	carmedB0823
Carg11170	MELO3C015909.2	Melon (DHL92) v3.6.1	carmedB0821
Carg11170	CsaV3_7G030120	Cucumber (Chinese Long) v3	carcucB0858
Carg11170	CsaV3_3G026560	Cucumber (Chinese Long) v3	carcucB0856
Carg11170	Cla97C10G194420	Watermelon (97103) v2	carwmbB0851
Carg11170	Cla97C09G167360	Watermelon (97103) v2	carwmbB0852
Carg11170	Bhi11G001087	Wax gourd	carwgoB0951
Carg11170	Bhi09G000658	Wax gourd	carwgoB0953

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11170	Carg07109	Silver-seed gourd	carcarB133
Carg11170	Carg13393	Silver-seed gourd	carcarB454
Carg11170	Carg07368	Silver-seed gourd	carcarB605

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11170	Cucumber (Gy14) v2	carcgybB0802
Carg11170	Cucumber (Gy14) v1	carcgyB0929
Carg11170	Cucurbita pepo (Zucchini)	carcpeB1146
Carg11170	Wild cucumber (PI 183967)	carcpiB0850
Carg11170	Cucumber (Chinese Long) v2	carcuB0829
Carg11170	Cucumber (Chinese Long) v3	carcucB0853
Carg11170	Wax gourd	carwgoB0952