Carg10954 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10954
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	HR-like lesion-inducing protein-related
Location	Cucurbita_argyrosperma_scaffold_027 : 57079 .. 58592 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCCAGCAGGAAGCTGAGCTCCGAATGGGGGTGGACACGAGGCGGTGTGCTAGCAAGGGGGTGGATTGGGGATGTCCCACATCGATTGTAGAAGGGACGAGTGACAACGAGGACGCTAGGGTCCGAAGGGGGGTGGATTGTGAGATCTCATATTGGATGGATGGGGAGGAGAACGAAGCCTTCTTTATAAGGAGATGGAAATCTCTCCCTAGTAGACGCATTTTAAAAACTTTGAGGGAAAGTCCAAAAGGGAATGTCCAAAGATGACAATATCTACTAACGGTGGGTTTGGACCGTTACATGTCTTGTATTTCTATGTTGTCTGCTTGCTCCTTGTTAAAGCCTAGTGTGCCTGTAATTATTGTTTTCTACAATAACTTCATAAACTATCGGCTTATAATTTGGTTGGGATCTATGTTCTCATGCCTCATGTTGTCCAATTTTTTGCATTTACGTCCATCTTGATAAGGCGTCTATGTATAGGTTCAACGAGTTTGGCACTGATGGTGGACCTGCTGCAAAGGAATTGCTTCCAAAGTTGAACACTCTTAGGTCAAACGTCTCTGCTAGATTTGGATTCAACCTTCCTGTCATTGATGTAAGCTTTGTTTCTTCTGTGAAATGAACCGAGTCTTTGTACTTTTTGTGAGATCTCACATTATTGGAAAGGGGAACGAAGCATTTCTTATAAGAATGTTGAAACCTCTACCTAATAGACGTGTTTTACAACCTTGAGGGAAAGCCCGGAAGGGAAAACTCAAAGAAGACAATATTTGCTAACGGTGGGCCAGCGAGGACACTGGCCCCCCGAGATTGCACATTGATGGAGAGGAGAATGAAGCATTCCTTATAAGGATGTAGAAACCTCTACCTAGTAGACGCGTTTTACAACCTTGAGGAGAAGCCCGGAAGGGAAAACTCAAAAAAGACAATATCTGCTAACAGTGGGCCTAAACTATTTCACTTTTTTCGCTGTCGTATTCACATGCGAGTTCATTTTATAGGTTTCCCATTTAGTTGCTGCATTCCTGTCTCTGAAAGGCATTGGCGGGCTACTCTTTGTTTTTGGGAGTCAGATTGGAGCTCATCTTCTGGTGGAATTTTCTTTGCCTCTTTTTGATTACGCCTTTGTTACTTGGCAGTTTATTCTGTTTCCCACTATAACACCAAAGTTGGTTTCTGTATGCAGCTTCTCTACTTGGCAATTAGCAGCCCAATTCTGTTTGATTTCTTCAACTATGGCCGTGGGAATTCCCAATATAGCCTACTATTGAATGACTTCTTATTGGTCAGTTCATCTAATTGATGCCAATTCATTCATGTCCCTGCAAGCTTCCTTCTTCTGGGTTATGATTCGTTTTTCGTTTTCGGTTTGCAGCACGTCGCACTTGCTGGTGCATTGCTCTTCTTCATCGGCACGAAGAACTCGATTTCGAGGAGGCAACAGAAGAAGAAGGCACACAAAGCCAAAACAAACTAGAAATGTAAGAGAAACCACTACTTCAACTCGA

mRNA sequence

ATGTGCCAGCAGGAAGCTGAGCTCCGAATGGGGGTGGACACGAGGCGGTGTGCTAGCAAGGGGGTGGATTGGGGATGTCCCACATCGATTGTAGAAGGGACGAGTGACAACGAGGACGCTAGGGCGTCTATGTATAGGTTCAACGAGTTTGGCACTGATGGTGGACCTGCTGCAAAGGAATTGCTTCCAAAGTTGAACACTCTTAGGTCAAACGTCTCTGCTAGATTTGGATTCAACCTTCCTGTCATTGATGTTTCCCATTTAGTTGCTGCATTCCTGTCTCTGAAAGGCATTGGCGGGCTACTCTTTGTTTTTGGGAGTCAGATTGGAGCTCATCTTCTGCTTCTCTACTTGGCAATTAGCAGCCCAATTCTGTTTGATTTCTTCAACTATGGCCGTGGGAATTCCCAATATAGCCTACTATTGAATGACTTCTTATTGCACGTCGCACTTGCTGGTGCATTGCTCTTCTTCATCGGCACGAAGAACTCGATTTCGAGGAGGCAACAGAAGAAGAAGGCACACAAAGCCAAAACAAACTAGAAATGTAAGAGAAACCACTACTTCAACTCGA

Coding sequence (CDS)

ATGTGCCAGCAGGAAGCTGAGCTCCGAATGGGGGTGGACACGAGGCGGTGTGCTAGCAAGGGGGTGGATTGGGGATGTCCCACATCGATTGTAGAAGGGACGAGTGACAACGAGGACGCTAGGGCGTCTATGTATAGGTTCAACGAGTTTGGCACTGATGGTGGACCTGCTGCAAAGGAATTGCTTCCAAAGTTGAACACTCTTAGGTCAAACGTCTCTGCTAGATTTGGATTCAACCTTCCTGTCATTGATGTTTCCCATTTAGTTGCTGCATTCCTGTCTCTGAAAGGCATTGGCGGGCTACTCTTTGTTTTTGGGAGTCAGATTGGAGCTCATCTTCTGCTTCTCTACTTGGCAATTAGCAGCCCAATTCTGTTTGATTTCTTCAACTATGGCCGTGGGAATTCCCAATATAGCCTACTATTGAATGACTTCTTATTGCACGTCGCACTTGCTGGTGCATTGCTCTTCTTCATCGGCACGAAGAACTCGATTTCGAGGAGGCAACAGAAGAAGAAGGCACACAAAGCCAAAACAAACTAG

Protein sequence

MCQQEAELRMGVDTRRCASKGVDWGCPTSIVEGTSDNEDARASMYRFNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN

Homology

[Close]

BLAST of Carg10954 vs. NCBI nr
Match: XP_022930412.1 (uncharacterized protein LOC111436866 [Cucurbita moschata])

HSP 1 Score: 257.3 bits (656), Expect = 3.9e-65
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 47  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG 106
           FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG
Sbjct: 24  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG 83

Query: 107 SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSIS 166
           SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLN FLLHVALAGALLFFIGTKNSIS
Sbjct: 84  SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNGFLLHVALAGALLFFIGTKNSIS 143

Query: 167 RRQQKKKAHKAKTN 181
           RRQQKKKAHKAKTN
Sbjct: 144 RRQQKKKAHKAKTN 157

[Close]

BLAST of Carg10954 vs. NCBI nr
Match: XP_023513661.1 (uncharacterized protein LOC111778204 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.5 bits (654), Expect = 6.6e-65
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 46  RFNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVF 105
           +FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLP IDVSHLVAAFLSLKGIGGLLFVF
Sbjct: 23  KFNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPFIDVSHLVAAFLSLKGIGGLLFVF 82

Query: 106 GSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSI 165
           GSQIGA+LLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSI
Sbjct: 83  GSQIGAYLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSI 142

Query: 166 SRRQQKKKAHKAKTN 181
           SRRQQKKKAHKAKTN
Sbjct: 143 SRRQQKKKAHKAKTN 157

[Close]

BLAST of Carg10954 vs. NCBI nr
Match: XP_023000553.1 (uncharacterized protein LOC111494794 [Cucurbita maxima])

HSP 1 Score: 253.4 bits (646), Expect = 5.6e-64
Identity = 131/134 (97.76%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 47  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG 106
           FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFV G
Sbjct: 24  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVSG 83

Query: 107 SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSIS 166
           SQIGA+LLLLYLAISSPILFDFFNYGRGNSQY+LLLNDFLLHVALAGALLFFIGTKNSIS
Sbjct: 84  SQIGAYLLLLYLAISSPILFDFFNYGRGNSQYNLLLNDFLLHVALAGALLFFIGTKNSIS 143

Query: 167 RRQQKKKAHKAKTN 181
           RRQQKKKAHKAKTN
Sbjct: 144 RRQQKKKAHKAKTN 157

[Close]

BLAST of Carg10954 vs. NCBI nr
Match: XP_023547571.1 (uncharacterized protein LOC111806468 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.5 bits (602), Expect = 7.1e-59
Identity = 120/134 (89.55%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 47  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG 106
           FNEFGTDGGPAAKEL+PK+ TLR NVSARFGF+LPVIDVSHLVAAFLSLKGIGGLLFVFG
Sbjct: 24  FNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFG 83

Query: 107 SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSIS 166
           S IGA+LLLLYLAIS+PIL+DFFNYGR  SQ+S+L+NDFLLHVALAGALLFFIGTKNSIS
Sbjct: 84  SPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMNDFLLHVALAGALLFFIGTKNSIS 143

Query: 167 RRQQKKKAHKAKTN 181
           RRQQKKKAHKAKTN
Sbjct: 144 RRQQKKKAHKAKTN 157

[Close]

BLAST of Carg10954 vs. NCBI nr
Match: XP_023006758.1 (uncharacterized protein LOC111499395 [Cucurbita maxima])

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 120/134 (89.55%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 47  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG 106
           FNEFGTDGGPAAKEL+PKL TLR NVSA+FGF+LPVIDVSHLVAAFLSLKGIGGLLFVFG
Sbjct: 24  FNEFGTDGGPAAKELIPKLYTLRRNVSAQFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFG 83

Query: 107 SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSIS 166
           S IGA+LLLLYLAIS+PIL+DFFNYGR  SQ+S+L+NDFLLHVALAGALLFFIGTKNSIS
Sbjct: 84  SPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMNDFLLHVALAGALLFFIGTKNSIS 143

Query: 167 RRQQKKKAHKAKTN 181
           RRQQKKKAHKAKTN
Sbjct: 144 RRQQKKKAHKAKTN 157

[Close]

BLAST of Carg10954 vs. TAIR10
Match: AT1G04340.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 144.1 bits (362), Expect = 8.7e-35
Identity = 76/134 (56.72%), Postives = 101/134 (75.37%), Query Frame = 0


Query: 47  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG 106
           FN+FGTDGGPAAKEL PKL+  ++++S+  G +LP ++V  +V A ++LKG+GGLLFV G
Sbjct: 24  FNDFGTDGGPAAKELAPKLDLTKAHLSSILGVSLPNLEVKQVVWAIVALKGLGGLLFVIG 83

Query: 107 SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSI- 166
           +  GA+LL +YL + SPIL+DF+NYG  + Q+SLLL +FL  VAL GALLFFIG KNS  
Sbjct: 84  NIFGAYLLAVYLVVVSPILYDFYNYGPEDRQFSLLLTEFLQSVALLGALLFFIGMKNSTT 143

Query: 167 -SRRQQKKKAHKAK 179
            S+R  KK+  K K
Sbjct: 144 SSKRILKKRTPKPK 157

[Close]

BLAST of Carg10954 vs. TAIR10
Match: AT4G14420.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 134.0 bits (336), Expect = 9.0e-32
Identity = 72/135 (53.33%), Postives = 94/135 (69.63%), Query Frame = 0


Query: 47  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG 106
           FN+FG DGG +AK L PK N   ++V+   G  LP +D+  LVAA ++LKGIGGLLFVFG
Sbjct: 24  FNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPVDMKILVAAAIALKGIGGLLFVFG 83

Query: 107 SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSIS 166
           S +GA+LLLL+ A+++PIL+DF+NY     ++  L + F   +AL G LLFFIG KNS  
Sbjct: 84  SSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFSKFTQSLALLGGLLFFIGMKNSRK 143

Query: 167 R-RQQKKKAHKAKTN 181
             RQ +KKA KAK N
Sbjct: 144 HGRQLRKKAPKAKAN 158

[Close]

BLAST of Carg10954 vs. TAIR10
Match: AT5G43460.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 132.9 bits (333), Expect = 2.0e-31
Identity = 69/127 (54.33%), Postives = 92/127 (72.44%), Query Frame = 0


Query: 53  DGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAH 112
           DGGPAAKEL PKL+ +++++S+R G  LP I+V  +VA  ++LKG+GGLLFV G+  GA+
Sbjct: 26  DGGPAAKELAPKLDLVKAHLSSRLGVTLPKIEVRQVVATIIALKGVGGLLFVIGNTFGAY 85

Query: 113 LLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSI-SRRQQK 172
           LL  YL +  PIL+DF+NYG     +SLLL +FL  VAL GALLFFIG KNS  +++  K
Sbjct: 86  LLASYLVVFGPILYDFYNYGPQERHFSLLLTEFLQSVALFGALLFFIGMKNSTPAKKNLK 145

Query: 173 KKAHKAK 179
           K+  K K
Sbjct: 146 KRTPKPK 152

[Close]

BLAST of Carg10954 vs. TAIR10
Match: AT3G23190.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 56.2 bits (134), Expect = 2.4e-08
Identity = 33/91 (36.26%), Postives = 48/91 (52.75%), Query Frame = 0


Query: 55  GPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLL 114
           G AA EL PKL    +   A             +VA  + +K +GG+LF+F + +GA LL
Sbjct: 45  GLAADELRPKLGFFENQAKA-------------IVALGILMKFVGGILFIFNTYVGAALL 104

Query: 115 LLYLAISSPILFDFFNYGRGNSQYSLLLNDF 146
           L+Y AI SPIL+DF+N       +++    F
Sbjct: 105 LVYQAILSPILYDFYNRDYDRDHFTVFYTKF 122

[Close]

BLAST of Carg10954 vs. TAIR10
Match: AT3G23175.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 51.6 bits (122), Expect = 5.8e-07
Identity = 40/127 (31.50%), Postives = 57/127 (44.88%), Query Frame = 0


Query: 51  GTDGGPAAKELLPKLNTLRSNVSAR----FGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG 110
           G  GGP  K + P +N L    S      FG  +   DV  +  A +S K    L F+FG
Sbjct: 49  GGAGGPLEKTMGPAVNMLSKYGSKALTFYFGMQVVAFDVRLIEFALISAKATAALWFIFG 108

Query: 111 SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSIS 170
             I A+ LL     S+ I F               LNDF  ++ L GALL++IG K+++ 
Sbjct: 109 QSIPAYFLLATQIFSTVIPF------------PTNLNDFTQNLTLIGALLYYIGLKHTVD 163

Query: 171 RRQQKKK 174
               ++K
Sbjct: 169 NLDDEEK 163

[Close]

BLAST of Carg10954 vs. TrEMBL
Match: tr|A0A1S3CE23|A0A1S3CE23_CUCME (uncharacterized protein LOC103499405 OS=Cucumis melo OX=3656 GN=LOC103499405 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 4.4e-57
Identity = 117/134 (87.31%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 47  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG 106
           FNEFGTDGG AAKELLPKLNT R N SARFGF+LPVIDVSHLVAAFLSLKGIGGLLFVFG
Sbjct: 24  FNEFGTDGGRAAKELLPKLNTFRRNFSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFG 83

Query: 107 SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSIS 166
           S IGA+LLLLYLAIS+PIL+DFFNYGR NSQ+ +L+NDF+LHVALAGALLFFIGTKNSI 
Sbjct: 84  SPIGAYLLLLYLAISTPILYDFFNYGRENSQFGILMNDFILHVALAGALLFFIGTKNSIW 143

Query: 167 RRQQKKKAHKAKTN 181
           R+QQKKKAHKAKTN
Sbjct: 144 RKQQKKKAHKAKTN 157

[Close]

BLAST of Carg10954 vs. TrEMBL
Match: tr|A0A0A0LNP8|A0A0A0LNP8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190730 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 4.8e-56
Identity = 114/134 (85.07%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 47  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG 106
           FNEFGTDGG AAKELLPKLNT R N SARFGF+LP IDV+HLVAAFLSLKGIGGLLFVFG
Sbjct: 80  FNEFGTDGGRAAKELLPKLNTFRRNFSARFGFDLPAIDVTHLVAAFLSLKGIGGLLFVFG 139

Query: 107 SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSIS 166
           S IGA+LLL+YLAIS+PIL+DFFNYGR NSQ+ +L+NDF+LHVALAGALLFFIGTKNSI 
Sbjct: 140 SPIGAYLLLIYLAISTPILYDFFNYGRENSQFGILMNDFILHVALAGALLFFIGTKNSIW 199

Query: 167 RRQQKKKAHKAKTN 181
           R+QQKKKAHKAKTN
Sbjct: 200 RKQQKKKAHKAKTN 213

[Close]

BLAST of Carg10954 vs. TrEMBL
Match: tr|B9STI9|B9STI9_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0491960 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.6e-37
Identity = 84/132 (63.64%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 47  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG 106
           FNEFG DGGPAAKEL+PKL  ++ ++S+  G  LP ID  +LVAA + LKG+GGLLFVFG
Sbjct: 24  FNEFGEDGGPAAKELIPKLAIVKKHLSSTLGVGLPDIDPRNLVAAIIFLKGVGGLLFVFG 83

Query: 107 SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSIS 166
           +  GA+LLLL+LA+SSP+L+DF+NYG     +S+LLN+FL  VAL GALLFF+G KN I 
Sbjct: 84  TPFGAYLLLLHLAVSSPLLYDFYNYGIDEPGFSILLNEFLQSVALFGALLFFLGMKNLIP 143

Query: 167 RRQQKKKAHKAK 179
           RRQ KKKA KAK
Sbjct: 144 RRQIKKKAPKAK 155

[Close]

BLAST of Carg10954 vs. TrEMBL
Match: tr|A0A067L727|A0A067L727_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02298 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36
Identity = 82/132 (62.12%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 47  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG 106
           FNEFG DGGPA KEL+PKL  +  ++S++ G  +P ID  +LVA  + LKG+GG LFVFG
Sbjct: 24  FNEFGEDGGPAVKELIPKLAIVNKHLSSKLGVVIPDIDPRNLVAGMIVLKGLGGFLFVFG 83

Query: 107 SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSIS 166
           +  GA+LLLL+LA+SSP+L+DF+NYGR  S+Y +LLN+FL  VAL GALLFFIG KN I 
Sbjct: 84  TPFGAYLLLLHLAVSSPLLYDFYNYGRDQSEYFILLNEFLQSVALFGALLFFIGMKNLIP 143

Query: 167 RRQQKKKAHKAK 179
           +RQ KKKA KAK
Sbjct: 144 KRQIKKKAPKAK 155

[Close]

BLAST of Carg10954 vs. TrEMBL
Match: tr|M5XM49|M5XM49_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G035100 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.9e-36
Identity = 77/133 (57.89%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 47  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFG 106
           FNEFG DGGPAAK+L+PK +  + N+S++    LP IDV HL AA ++LKG+GG+LF+  
Sbjct: 24  FNEFGVDGGPAAKDLVPKFDVFKKNLSSKLRIELPHIDVKHLAAATVALKGVGGILFILN 83

Query: 107 SQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSIS 166
           S  GA LLLL LA ++P+++DF+NY   N+++ +LLNDFL H AL GALLFF+G KNSI 
Sbjct: 84  SSFGASLLLLQLAFTTPLIYDFYNYSPDNTKFGILLNDFLQHAALFGALLFFVGMKNSIP 143

Query: 167 RRQQKKKAHKAKT 180
           +RQ KKKA K KT
Sbjct: 144 KRQLKKKAPKTKT 156

The following BLAST results are available for this feature:

BLAST of Carg10954 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930412.1	3.9e-65	99.25	uncharacterized protein LOC111436866 [Cucurbita moschata]	[more]
XP_023513661.1	6.6e-65	97.78	uncharacterized protein LOC111778204 [Cucurbita pepo subsp. pepo]	[more]
XP_023000553.1	5.6e-64	97.76	uncharacterized protein LOC111494794 [Cucurbita maxima]	[more]
XP_023547571.1	7.1e-59	89.55	uncharacterized protein LOC111806468 [Cucurbita pepo subsp. pepo]	[more]
XP_023006758.1	1.2e-58	89.55	uncharacterized protein LOC111499395 [Cucurbita maxima]	[more]

BLAST of Carg10954 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04340.1	8.7e-35	56.72	HR-like lesion-inducing protein-related	[more]
AT4G14420.1	9.0e-32	53.33	HR-like lesion-inducing protein-related	[more]
AT5G43460.1	2.0e-31	54.33	HR-like lesion-inducing protein-related	[more]
AT3G23190.1	2.4e-08	36.26	HR-like lesion-inducing protein-related	[more]
AT3G23175.1	5.8e-07	31.50	HR-like lesion-inducing protein-related	[more]

BLAST of Carg10954 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg10954 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CE23\|A0A1S3CE23_CUCME	4.4e-57	87.31	uncharacterized protein LOC103499405 OS=Cucumis melo OX=3656 GN=LOC103499405 PE=...	[more]
tr\|A0A0A0LNP8\|A0A0A0LNP8_CUCSA	4.8e-56	85.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190730 PE=4 SV=1	[more]
tr\|B9STI9\|B9STI9_RICCO	6.6e-37	63.64	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0491960 PE=4 SV=1	[more]
tr\|A0A067L727\|A0A067L727_JATCU	1.5e-36	62.12	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02298 PE=4 SV=1	[more]
tr\|M5XM49\|M5XM49_PRUPE	1.9e-36	57.89	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G035100 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008637	HR_lesion

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10954-RA	Carg10954-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008637	HR-like lesion-inducer	PFAM	PF05514	HR_lesion	coord: 43..160 e-value: 5.5E-38 score: 130.2
None	No IPR available	PANTHER	PTHR31474	FAMILY NOT NAMED	coord: 46..179
None	No IPR available	PANTHER	PTHR31474:SF4	SUBFAMILY NOT NAMED	coord: 46..179

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg10954	Cla021541	Watermelon (97103) v1	carwmB1075
Carg10954	Cla007571	Watermelon (97103) v1	carwmB1077
Carg10954	Csa2G185730	Cucumber (Chinese Long) v2	carcuB1090
Carg10954	Csa3G135760	Cucumber (Chinese Long) v2	carcuB1093
Carg10954	MELO3C006440	Melon (DHL92) v3.5.1	carmeB1050
Carg10954	MELO3C022976	Melon (DHL92) v3.5.1	carmeB1046
Carg10954	ClCG06G006850	Watermelon (Charleston Gray)	carwcgB1046
Carg10954	CSPI03G12160	Wild cucumber (PI 183967)	carcpiB1115
Carg10954	CSPI02G10510	Wild cucumber (PI 183967)	carcpiB1112
Carg10954	Cucsa.255200	Cucumber (Gy14) v1	carcgyB1190
Carg10954	Cucsa.383740	Cucumber (Gy14) v1	carcgyB1195
Carg10954	CmaCh08G010920	Cucurbita maxima (Rimu)	carcmaB1495
Carg10954	CmaCh17G001720	Cucurbita maxima (Rimu)	carcmaB1489
Carg10954	CmoCh08G010680	Cucurbita moschata (Rifu)	carcmoB1452
Carg10954	CmoCh17G001690	Cucurbita moschata (Rifu)	carcmoB1448
Carg10954	Lsi09G012470	Bottle gourd (USVL1VR-Ls)	carlsiB981
Carg10954	Cp4.1LG17g01890	Cucurbita pepo (Zucchini)	carcpeB1503
Carg10954	Cp4.1LG12g01530	Cucurbita pepo (Zucchini)	carcpeB1501
Carg10954	CsGy2G010530	Cucumber (Gy14) v2	carcgybB1056
Carg10954	CsGy3G012290	Cucumber (Gy14) v2	carcgybB1059
Carg10954	MELO3C006440.2	Melon (DHL92) v3.6.1	carmedB1064
Carg10954	MELO3C022976.2	Melon (DHL92) v3.6.1	carmedB1060
Carg10954	CsaV3_2G012930	Cucumber (Chinese Long) v3	carcucB1123
Carg10954	Cla97C06G116450	Watermelon (97103) v2	carwmbB1133
Carg10954	Bhi12G001451	Wax gourd	carwgoB1265

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg10954	Carg10078	Silver-seed gourd	carcarB267
Carg10954	Carg16570	Silver-seed gourd	carcarB275

The following block(s) are covering this gene:


Gene	Organism	Block
Carg10954	Silver-seed gourd	carcarB601
Carg10954	Silver-seed gourd	carcarB615
Carg10954	Silver-seed gourd	carcarB649
Carg10954	Cucurbita maxima (Rimu)	carcmaB1485
Carg10954	Cucurbita maxima (Rimu)	carcmaB1491
Carg10954	Cucurbita maxima (Rimu)	carcmaB1492
Carg10954	Cucurbita moschata (Rifu)	carcmoB1443
Carg10954	Cucurbita moschata (Rifu)	carcmoB1449
Carg10954	Cucurbita moschata (Rifu)	carcmoB1450
Carg10954	Cucurbita moschata (Rifu)	carcmoB1451
Carg10954	Cucurbita pepo (Zucchini)	carcpeB1502
Carg10954	Cucurbita pepo (Zucchini)	carcpeB1504
Carg10954	Cucurbita pepo (Zucchini)	carcpeB1506
Carg10954	Cucurbita pepo (Zucchini)	carcpeB1507
Carg10954	Cucumber (Chinese Long) v3	carcucB1126
Carg10954	Bottle gourd (USVL1VR-Ls)	carlsiB983
Carg10954	Bottle gourd (USVL1VR-Ls)	carlsiB984
Carg10954	Watermelon (Charleston Gray)	carwcgB1045
Carg10954	Watermelon (Charleston Gray)	carwcgB1050
Carg10954	Watermelon (97103) v1	carwmB1073
Carg10954	Watermelon (97103) v2	carwmbB1131
Carg10954	Watermelon (97103) v2	carwmbB1137
Carg10954	Wax gourd	carwgoB1271