Carg10078 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10078
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	HR-like lesion-inducing protein-related
Location	Cucurbita_argyrosperma_scaffold_039 : 258297 .. 261512 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGCATTACTGTTTGGGCGTTTAATTTTACGATTTTAGGCTTCTCTTCTATAATTTGCGCCCCCGTTGGAGTTTATCGGAGCTCTGAGTTTCCGATCCCACAAGCGCCAAGGTTCAGATTAGCCCTTCGTTTTCTCTCTTTCTCTCTAAAATGGGGTTCTTCTCTTTCCTTGGAAGGGTCCTCTTTGCCTCGCTGTTCATCCTCTCCGCCTGGCAAATGTACTATCTCTTTCTCTCTTTACATTATCAGATCGGACTGTATTATCTCTATGTTCTTTCAATCTGATTATTTTTGTTGTCTTCTACTGTAGATCTGCTAATTTTGATCGTATTTCTGTGTTTGTTTGTTCTTCTGATGATCGATTTTAGGGGTTTTGTAATCGGCGCTGTAGTGTGTGACTTTGTCTGTGTTTTCACTGATGTTTGACGATATTTGTCGCATTAGTTTTCCAATCGTAAGGATTATTGCTCTTTTTTTATGGGATTTATATTCTGATTGTTGATCTCGCCTTTTTTATGGACGGTTTGAATGTGCTTTTTGAAATCAGGAGTGAAGGTTTTTCGGAAATGGAAGGGGATTAAGGGATAAACAGACTTTAGTTTTTGTATTAGTGAGGAATGGAGAGTTCTTACCAATTTTTCTTCGCTGGATATTGACCTATCGCTTCTTGAGATTAGATTTGGAATGTTGGACGTTGTGATGAATTCTTAAGAAGCTGTATTTTTAGTTGATTCCTGAGGACCCACTTCACTTTTGGGTCATTCTTAATATTTGATTCATTTAAATTATGCATCATTGTGATAATTTGTTTTCAAGCTTAGTGGTTTGATGGAAGGAAATTATCAGATTGTTTTAGGTTCTTGATTTCTTTTTCTTTTTGTGTGTGTTTTCAACGAGATGGAACTTTCTAAATCCTTTTCTAGGAATCAATCTTAATTAAGAAAAGAGGTCGAAAAGGTTTTCAAATTTCATCTTTCAGGCAATACAAGTGCAGTTTTGCTTAACTTGTGTTAGATAGATTTGCATTTTGCTTATTTCTACGCTCTGTGATTTGAAGATTGGATCGGGTCTTCTTCTCCATTGTGAAAAAGTTAATCGAGTCGAACATTACTCGGGCGATCATGAAATGTAATACGTCCAACATACAATGAAATGAAGGATTTCTATGTTGTCTTCTTGTTTCTTGTTAAATTCTAATGTGCTTGTAAATATTGTTTTCTATCACTCGGTTTCTGGGCCATAATCATTTTGTAAGGGAGATGACCGACTGGTTGTAGGCGTAGCATTGGAACTGCTTTGTAGGTTTTTGTTAGGAAAATAATTCTATAGACCTTTTCGGTAAAACAGATCAAACTTATTATTATCAAAATGATTTGAACGAGCTTTAGCCTCTTTAGGAGTTATTACTTCCTTGGTAGCTCAACACATGTACTCTTTACCTGCTTATGCAAAACTCGTGGCTAATGACTTGGCTGGGTTCTATGCTCTCTGGCCTCATGTTAAGTTAAATAGATGAGGAATAAGATCGGACTTTCAAGTTTGTGTTTATGTTGACCTCGATAAGGCGTCTATTGTTAGGTTCAATGAATTTGGCACTGATGGTGGACCTGCTGCAAAGGAACTCATTCCGAAGATGTACACTCTTAGGAGAAACGTCTCCGCTCGATTTGGATTTGACCTACCCGTTATTGACGTGAGTTTCAGTTCTTCTGTGGATTGAACTGCTGAACCTTCGTACCCTTTTCTCATTTGTACTCAGATTATGAGTTTGTTCTGCAGGTTTCCCATTTAGTTGCTGCGTTTTTGTCTCTTAAAGGCATTGGTGGCCTTCTCTTTGTATTTGGGAGTCCAATTGGAGCTTATCTTCTGGTAGAATTTGCTTTGCCTCCTTTTGTTGATGCCTTTATTACTTCAAGTTACTTTCAGTTTGTTCTTATTCCCATTATAGCAGCCAAGCTTGTTTGTTTGTGCAGCTTCTCTACTTGGCCATTAGTACACCAATTCTGTATGATTTTTTCAACTATGGTCGTGACAAGTCCCAATTCAGTATACTAATGAATGATTTCTTACTGGTGAGTTAAGCAAATTTGTTTGCACTAAGCCAATTCATTCGTGTTCTTGCAAACGTCATATTTCGTTTATCTTTTTCGATTTGCAGCACGTGGCACTTGCTGGTGCATTGCTCTTCTTCATCGGAACGAAGAACTCGATTTCGAGGAGGCAACAGAAGAAGAAGGCACACAAAGCCAAAACGAACTAGAAATGTAAGACAACCCATTTCTTTAACTCGAAATCGTACCATTCCTTTCCATTCCTTTCACTCGGGTTTGGGGCTCGGATCGAAAAGCTTCTTATTTAATAATCCTTTTTGTGATGATAGATTTACTCATTTAGGAATTTCAGTTCTCTATTGACTGTCGAATGTTGTTGTTGGAGTTCATTACAGTCAAATGTGAAGGGATTTAGACACATGTTCTTCTCCATTCAAACTGTTTGCAGAGGCTTAGAATCTTTTATTCAATTAACCTTATTTGTAGAACTATATGTTGATGTGCATCTTTTTGGATGATAATTTTTCTGGAGAATCATCTAACCATATTTTGAATAATCTTGGAAGTCTCGTATCAACGAACATGCTTTCGAATCGAACCATCATTTACGATCTCTGTAATCATTTTGATATCTATCATGTCTGCCATTCATTAGGAATCTATCACCCATTTATCCGTGAGATTGAAGTGTAGGAATAGTTTCTGATCCTCATGAAGCTCACCATTCTCTGATTTGTCTTTGAAAAGTTCATAAACTTTAATTGTGTTCCTATTACCGACAAAATAGTGATATGATGGTTAGAAATGTTACTCGATACAAGTGAATATTCTTTTCAAGGTTAGGTATCGAGTCAATCAAGTCTAAATATGAGCAAAATCGAAACTCAAACTATGAGTCGGGTTTGGTTAGAATAGAGTCATACATTCTAAGGTAGAGATGGTTTAGTTCTTGGAACTTGTAGGTGAATGTATCGGTTCATACCTTCTAAGGTAGAGATGGTTTAGTTCTTGGAACTTGCAGGTGAATGTATCGGTTTAGACGTTCCAAGTTCGAACTTTTGAGCGAGCTCAATACCTATGTCTCGAGTATGAATCTTGGGGTGGGTGTGACGTATGAGGCCCTTTTGATATGTGACGTAGATTTTGTAAAGAAAACAATTTATA

mRNA sequence

TTAGCATTACTGTTTGGGCGTTTAATTTTACGATTTTAGGCTTCTCTTCTATAATTTGCGCCCCCGTTGGAGTTTATCGGAGCTCTGAGTTTCCGATCCCACAAGCGCCAAGGTTCAGATTAGCCCTTCGTTTTCTCTCTTTCTCTCTAAAATGGGGTTCTTCTCTTTCCTTGGAAGGGTCCTCTTTGCCTCGCTGTTCATCCTCTCCGCCTGGCAAATGTTCAATGAATTTGGCACTGATGGTGGACCTGCTGCAAAGGAACTCATTCCGAAGATGTACACTCTTAGGAGAAACGTCTCCGCTCGATTTGGATTTGACCTACCCGTTATTGACGTTTCCCATTTAGTTGCTGCGTTTTTGTCTCTTAAAGGCATTGGTGGCCTTCTCTTTGTATTTGGGAGTCCAATTGGAGCTTATCTTCTGCTTCTCTACTTGGCCATTAGTACACCAATTCTGTATGATTTTTTCAACTATGGTCGTGACAAGTCCCAATTCAGTATACTAATGAATGATTTCTTACTGCACGTGGCACTTGCTGGTGCATTGCTCTTCTTCATCGGAACGAAGAACTCGATTTCGAGGAGGCAACAGAAGAAGAAGGCACACAAAGCCAAAACGAACTAGAAATGTAAGACAACCCATTTCTTTAACTCGAAATCGTACCATTCCTTTCCATTCCTTTCACTCGGGTTTGGGGCTCGGATCGAAAAGCTTCTTATTTAATAATCCTTTTTGTGATGATAGATTTACTCATTTAGGAATTTCAGTTCTCTATTGACTGTCGAATGTTGTTGTTGGAGTTCATTACAGTCAAATGTGAAGGGATTTAGACACATGTTCTTCTCCATTCAAACTGTTTGCAGAGGCTTAGAATCTTTTATTCAATTAACCTTATTTGTAGAACTATATGTTGATGTGCATCTTTTTGGATGATAATTTTTCTGGAGAATCATCTAACCATATTTTGAATAATCTTGGAAGTCTCGTATCAACGAACATGCTTTCGAATCGAACCATCATTTACGATCTCTGTAATCATTTTGATATCTATCATGTCTGCCATTCATTAGGAATCTATCACCCATTTATCCGTGAGATTGAAGTGTAGGAATAGTTTCTGATCCTCATGAAGCTCACCATTCTCTGATTTGTCTTTGAAAAGTTCATAAACTTTAATTGTGTTCCTATTACCGACAAAATAGTGATATGATGGTTAGAAATGTTACTCGATACAAGTGAATATTCTTTTCAAGGTTAGGTATCGAGTCAATCAAGTCTAAATATGAGCAAAATCGAAACTCAAACTATGAGTCGGGTTTGGTTAGAATAGAGTCATACATTCTAAGGTAGAGATGGTTTAGTTCTTGGAACTTGTAGGTGAATGTATCGGTTCATACCTTCTAAGGTAGAGATGGTTTAGTTCTTGGAACTTGCAGGTGAATGTATCGGTTTAGACGTTCCAAGTTCGAACTTTTGAGCGAGCTCAATACCTATGTCTCGAGTATGAATCTTGGGGTGGGTGTGACGTATGAGGCCCTTTTGATATGTGACGTAGATTTTGTAAAGAAAACAATTTATA

Coding sequence (CDS)

ATGGGGTTCTTCTCTTTCCTTGGAAGGGTCCTCTTTGCCTCGCTGTTCATCCTCTCCGCCTGGCAAATGTTCAATGAATTTGGCACTGATGGTGGACCTGCTGCAAAGGAACTCATTCCGAAGATGTACACTCTTAGGAGAAACGTCTCCGCTCGATTTGGATTTGACCTACCCGTTATTGACGTTTCCCATTTAGTTGCTGCGTTTTTGTCTCTTAAAGGCATTGGTGGCCTTCTCTTTGTATTTGGGAGTCCAATTGGAGCTTATCTTCTGCTTCTCTACTTGGCCATTAGTACACCAATTCTGTATGATTTTTTCAACTATGGTCGTGACAAGTCCCAATTCAGTATACTAATGAATGATTTCTTACTGCACGTGGCACTTGCTGGTGCATTGCTCTTCTTCATCGGAACGAAGAACTCGATTTCGAGGAGGCAACAGAAGAAGAAGGCACACAAAGCCAAAACGAACTAG

Protein sequence

MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMNDFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN

Homology

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BLAST of Carg10078 vs. NCBI nr
Match: XP_023547571.1 (uncharacterized protein LOC111806468 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.2 bits (783), Expect = 6.3e-80
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN
Sbjct: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Sbjct: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 157

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BLAST of Carg10078 vs. NCBI nr
Match: XP_023006758.1 (uncharacterized protein LOC111499395 [Cucurbita maxima])

HSP 1 Score: 303.5 bits (776), Expect = 4.1e-79
Identity = 155/157 (98.73%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPK+YTLRRNVSA+FGFDLPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKLYTLRRNVSAQFGFDLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN
Sbjct: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Sbjct: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 157

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BLAST of Carg10078 vs. NCBI nr
Match: XP_022958789.1 (uncharacterized protein LOC111459955 [Cucurbita moschata])

HSP 1 Score: 302.8 bits (774), Expect = 7.0e-79
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGF LPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFYLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN
Sbjct: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Sbjct: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 157

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BLAST of Carg10078 vs. NCBI nr
Match: XP_022138701.1 (uncharacterized protein LOC111009799 [Momordica charantia])

HSP 1 Score: 287.0 bits (733), Expect = 4.0e-74
Identity = 145/157 (92.36%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PK+   RRNVS+ FGF+LPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           D+SHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGR+KSQFSIL+N
Sbjct: 61  DISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSILLN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DFLLHVALAGALLFFIGTKNSISRRQQKK+AHKAKTN
Sbjct: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN 157

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BLAST of Carg10078 vs. NCBI nr
Match: XP_008460626.1 (PREDICTED: uncharacterized protein LOC103499405 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 2.6e-73
Identity = 145/157 (92.36%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGG AAKEL+PK+ T RRN SARFGFDLPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGRAAKELLPKLNTFRRNFSARFGFDLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGR+ SQF ILMN
Sbjct: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRENSQFGILMN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DF+LHVALAGALLFFIGTKNSI R+QQKKKAHKAKTN
Sbjct: 121 DFILHVALAGALLFFIGTKNSIWRKQQKKKAHKAKTN 157

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BLAST of Carg10078 vs. TAIR10
Match: AT1G04340.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 187.6 bits (475), Expect = 6.0e-48
Identity = 98/157 (62.42%), Postives = 121/157 (77.07%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFN+FGTDGGPAAKEL PK+   + ++S+  G  LP +
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNDFGTDGGPAAKELAPKLDLTKAHLSSILGVSLPNL 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           +V  +V A ++LKG+GGLLFV G+  GAYLL +YL + +PILYDF+NYG +  QFS+L+ 
Sbjct: 61  EVKQVVWAIVALKGLGGLLFVIGNIFGAYLLAVYLVVVSPILYDFYNYGPEDRQFSLLLT 120

Query: 121 DFLLHVALAGALLFFIGTKNSI--SRRQQKKKAHKAK 156
           +FL  VAL GALLFFIG KNS   S+R  KK+  K K
Sbjct: 121 EFLQSVALLGALLFFIGMKNSTTSSKRILKKRTPKPK 157

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BLAST of Carg10078 vs. TAIR10
Match: AT5G43460.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 176.0 bits (445), Expect = 1.8e-44
Identity = 94/156 (60.26%), Postives = 116/156 (74.36%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFN    DGGPAAKEL PK+  ++ ++S+R G  LP I
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFN----DGGPAAKELAPKLDLVKAHLSSRLGVTLPKI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           +V  +VA  ++LKG+GGLLFV G+  GAYLL  YL +  PILYDF+NYG  +  FS+L+ 
Sbjct: 61  EVRQVVATIIALKGVGGLLFVIGNTFGAYLLASYLVVFGPILYDFYNYGPQERHFSLLLT 120

Query: 121 DFLLHVALAGALLFFIGTKNSI-SRRQQKKKAHKAK 156
           +FL  VAL GALLFFIG KNS  +++  KK+  K K
Sbjct: 121 EFLQSVALFGALLFFIGMKNSTPAKKNLKKRTPKPK 152

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BLAST of Carg10078 vs. TAIR10
Match: AT4G14420.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 167.2 bits (422), Expect = 8.3e-42
Identity = 91/158 (57.59%), Postives = 111/158 (70.25%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           M   SFLGR LF S+F+LSAWQ FN+FG DGG +AK L PK      +V+   G  LP +
Sbjct: 1   MELASFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPV 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           D+  LVAA ++LKGIGGLLFVFGS +GAYLLLL+ A++TPILYDF+NY  D+ +F  L +
Sbjct: 61  DMKILVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFS 120

Query: 121 DFLLHVALAGALLFFIGTKNSISR-RQQKKKAHKAKTN 158
            F   +AL G LLFFIG KNS    RQ +KKA KAK N
Sbjct: 121 KFTQSLALLGGLLFFIGMKNSRKHGRQLRKKAPKAKAN 158

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BLAST of Carg10078 vs. TAIR10
Match: AT3G23190.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 77.4 bits (189), Expect = 8.7e-15
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 8   GRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVIDVSHLVA 67
           GRV+FAS F++SAW+ +  FG     AA EL PK+        A             +VA
Sbjct: 25  GRVVFASAFLVSAWREYYGFGL----AADELRPKLGFFENQAKA-------------IVA 84

Query: 68  AFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMNDF 123
             + +K +GG+LF+F + +GA LLL+Y AI +PILYDF+N   D+  F++    F
Sbjct: 85  LGILMKFVGGILFIFNTYVGAALLLVYQAILSPILYDFYNRDYDRDHFTVFYTKF 122

[Close]

BLAST of Carg10078 vs. TAIR10
Match: AT3G23180.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 7   LGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVIDVSHLV 66
           +GR LFAS F LS+W  + E   +         PK           FG+      + HL+
Sbjct: 24  IGRALFASSFFLSSWHDYMELKANWNGTEDYWSPK-----------FGYSGD--QIKHLM 83

Query: 67  AAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSIL 119
              + ++ +GGL+F++GS  GA+LLL+Y  I+T + +DF+N+  D  +F +L
Sbjct: 84  TVSIIVRTLGGLIFIYGSFFGAFLLLMYQGIATMVHHDFYNHRLDTEEFGLL 122

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BLAST of Carg10078 vs. TrEMBL
Match: tr|A0A1S3CE23|A0A1S3CE23_CUCME (uncharacterized protein LOC103499405 OS=Cucumis melo OX=3656 GN=LOC103499405 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.7e-73
Identity = 145/157 (92.36%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGG AAKEL+PK+ T RRN SARFGFDLPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGRAAKELLPKLNTFRRNFSARFGFDLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGR+ SQF ILMN
Sbjct: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRENSQFGILMN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DF+LHVALAGALLFFIGTKNSI R+QQKKKAHKAKTN
Sbjct: 121 DFILHVALAGALLFFIGTKNSIWRKQQKKKAHKAKTN 157

[Close]

BLAST of Carg10078 vs. TrEMBL
Match: tr|A0A0A0LNP8|A0A0A0LNP8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190730 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.9e-72
Identity = 142/157 (90.45%), Postives = 149/157 (94.90%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGG AAKEL+PK+ T RRN SARFGFDLP I
Sbjct: 57  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGRAAKELLPKLNTFRRNFSARFGFDLPAI 116

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DV+HLVAAFLSLKGIGGLLFVFGSPIGAYLLL+YLAISTPILYDFFNYGR+ SQF ILMN
Sbjct: 117 DVTHLVAAFLSLKGIGGLLFVFGSPIGAYLLLIYLAISTPILYDFFNYGRENSQFGILMN 176

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DF+LHVALAGALLFFIGTKNSI R+QQKKKAHKAKTN
Sbjct: 177 DFILHVALAGALLFFIGTKNSIWRKQQKKKAHKAKTN 213

[Close]

BLAST of Carg10078 vs. TrEMBL
Match: tr|B9STI9|B9STI9_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0491960 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.6e-53
Identity = 111/155 (71.61%), Postives = 131/155 (84.52%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFG DGGPAAKELIPK+  +++++S+  G  LP I
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGEDGGPAAKELIPKLAIVKKHLSSTLGVGLPDI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           D  +LVAA + LKG+GGLLFVFG+P GAYLLLL+LA+S+P+LYDF+NYG D+  FSIL+N
Sbjct: 61  DPRNLVAAIIFLKGVGGLLFVFGTPFGAYLLLLHLAVSSPLLYDFYNYGIDEPGFSILLN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAK 156
           +FL  VAL GALLFF+G KN I RRQ KKKA KAK
Sbjct: 121 EFLQSVALFGALLFFLGMKNLIPRRQIKKKAPKAK 155

[Close]

BLAST of Carg10078 vs. TrEMBL
Match: tr|A0A067L727|A0A067L727_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02298 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.8e-52
Identity = 107/155 (69.03%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFG DGGPA KELIPK+  + +++S++ G  +P I
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGEDGGPAVKELIPKLAIVNKHLSSKLGVVIPDI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           D  +LVA  + LKG+GG LFVFG+P GAYLLLL+LA+S+P+LYDF+NYGRD+S++ IL+N
Sbjct: 61  DPRNLVAGMIVLKGLGGFLFVFGTPFGAYLLLLHLAVSSPLLYDFYNYGRDQSEYFILLN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAK 156
           +FL  VAL GALLFFIG KN I +RQ KKKA KAK
Sbjct: 121 EFLQSVALFGALLFFIGMKNLIPKRQIKKKAPKAK 155

[Close]

BLAST of Carg10078 vs. TrEMBL
Match: tr|A0A2P5FLQ4|A0A2P5FLQ4_9ROSA (HR-like lesion-inducer OS=Trema orientalis OX=63057 GN=TorRG33x02_056200 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.6e-50
Identity = 104/156 (66.67%), Postives = 123/156 (78.85%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQ FNEFG DGGPAAKEL+PK    + N+SA+ G  LP I
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQAFNEFGVDGGPAAKELVPKFTAFKENLSAKLGVALPNI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           D   LVA  ++ K +GG+LFVFGS  GAY+LL YLA+ TPILYDF+NY  +K +F +L+N
Sbjct: 61  DARQLVATIITSKALGGILFVFGSSFGAYILLFYLALITPILYDFYNYSPEKPRFGVLLN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKT 157
           DFL +VAL GALL FIG KNS+ +RQ KKKA K+KT
Sbjct: 121 DFLQNVALFGALLIFIGMKNSLPKRQIKKKAPKSKT 156

The following BLAST results are available for this feature:

BLAST of Carg10078 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547571.1	6.3e-80	100.00	uncharacterized protein LOC111806468 [Cucurbita pepo subsp. pepo]	[more]
XP_023006758.1	4.1e-79	98.73	uncharacterized protein LOC111499395 [Cucurbita maxima]	[more]
XP_022958789.1	7.0e-79	99.36	uncharacterized protein LOC111459955 [Cucurbita moschata]	[more]
XP_022138701.1	4.0e-74	92.36	uncharacterized protein LOC111009799 [Momordica charantia]	[more]
XP_008460626.1	2.6e-73	92.36	PREDICTED: uncharacterized protein LOC103499405 [Cucumis melo]	[more]

BLAST of Carg10078 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04340.1	6.0e-48	62.42	HR-like lesion-inducing protein-related	[more]
AT5G43460.1	1.8e-44	60.26	HR-like lesion-inducing protein-related	[more]
AT4G14420.1	8.3e-42	57.59	HR-like lesion-inducing protein-related	[more]
AT3G23190.1	8.7e-15	39.13	HR-like lesion-inducing protein-related	[more]
AT3G23180.1	1.2e-11	33.04	HR-like lesion-inducing protein-related	[more]

BLAST of Carg10078 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg10078 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CE23\|A0A1S3CE23_CUCME	1.7e-73	92.36	uncharacterized protein LOC103499405 OS=Cucumis melo OX=3656 GN=LOC103499405 PE=...	[more]
tr\|A0A0A0LNP8\|A0A0A0LNP8_CUCSA	1.9e-72	90.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190730 PE=4 SV=1	[more]
tr\|B9STI9\|B9STI9_RICCO	2.6e-53	71.61	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0491960 PE=4 SV=1	[more]
tr\|A0A067L727\|A0A067L727_JATCU	2.8e-52	69.03	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02298 PE=4 SV=1	[more]
tr\|A0A2P5FLQ4\|A0A2P5FLQ4_9ROSA	1.6e-50	66.67	HR-like lesion-inducer OS=Trema orientalis OX=63057 GN=TorRG33x02_056200 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008637	HR_lesion

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10078-RA	Carg10078-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008637	HR-like lesion-inducer	PFAM	PF05514	HR_lesion	coord: 1..137 e-value: 2.4E-51 score: 173.5
None	No IPR available	PANTHER	PTHR31474	FAMILY NOT NAMED	coord: 1..156
None	No IPR available	PANTHER	PTHR31474:SF4	SUBFAMILY NOT NAMED	coord: 1..156

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg10078	Cla021541	Watermelon (97103) v1	carwmB0218
Carg10078	Cla007571	Watermelon (97103) v1	carwmB0219
Carg10078	Csa2G185730	Cucumber (Chinese Long) v2	carcuB0254
Carg10078	Csa3G135760	Cucumber (Chinese Long) v2	carcuB0256
Carg10078	MELO3C006440	Melon (DHL92) v3.5.1	carmeB0236
Carg10078	MELO3C022976	Melon (DHL92) v3.5.1	carmeB0233
Carg10078	ClCG06G006850	Watermelon (Charleston Gray)	carwcgB0221
Carg10078	CSPI03G12160	Wild cucumber (PI 183967)	carcpiB0261
Carg10078	CSPI02G10510	Wild cucumber (PI 183967)	carcpiB0259
Carg10078	Cucsa.255200	Cucumber (Gy14) v1	carcgyB0269
Carg10078	Cucsa.383740	Cucumber (Gy14) v1	carcgyB0273
Carg10078	CmaCh06G013370	Cucurbita maxima (Rimu)	carcmaB0316
Carg10078	CmaCh08G010920	Cucurbita maxima (Rimu)	carcmaB0321
Carg10078	CmaCh14G018000	Cucurbita maxima (Rimu)	carcmaB0313
Carg10078	CmaCh17G001720	Cucurbita maxima (Rimu)	carcmaB0314
Carg10078	CmoCh14G018380	Cucurbita moschata (Rifu)	carcmoB0319
Carg10078	CmoCh08G010680	Cucurbita moschata (Rifu)	carcmoB0326
Carg10078	CmoCh06G013420	Cucurbita moschata (Rifu)	carcmoB0322
Carg10078	CmoCh17G001690	Cucurbita moschata (Rifu)	carcmoB0320
Carg10078	Lsi09G012470	Bottle gourd (USVL1VR-Ls)	carlsiB204
Carg10078	Lsi05G017050	Bottle gourd (USVL1VR-Ls)	carlsiB206
Carg10078	Cp4.1LG03g09960	Cucurbita pepo (Zucchini)	carcpeB0327
Carg10078	Cp4.1LG12g01530	Cucurbita pepo (Zucchini)	carcpeB0322
Carg10078	Cp4.1LG17g01890	Cucurbita pepo (Zucchini)	carcpeB0323
Carg10078	Cp4.1LG08g03470	Cucurbita pepo (Zucchini)	carcpeB0329
Carg10078	CsGy2G010530	Cucumber (Gy14) v2	carcgybB0243
Carg10078	CsGy3G012290	Cucumber (Gy14) v2	carcgybB0245
Carg10078	MELO3C006440.2	Melon (DHL92) v3.6.1	carmedB0243
Carg10078	MELO3C022976.2	Melon (DHL92) v3.6.1	carmedB0240
Carg10078	CsaV3_3G012310	Cucumber (Chinese Long) v3	carcucB0260
Carg10078	CsaV3_2G012930	Cucumber (Chinese Long) v3	carcucB0258
Carg10078	Cla97C06G116450	Watermelon (97103) v2	carwmbB0230
Carg10078	Bhi12G001451	Wax gourd	carwgoB0282

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg10078	Carg16570	Silver-seed gourd	carcarB259
Carg10078	Carg06210	Silver-seed gourd	carcarB266
Carg10078	Carg10954	Silver-seed gourd	carcarB267

The following block(s) are covering this gene:


Gene	Organism	Block
Carg10078	Silver-seed gourd	carcarB262
Carg10078	Silver-seed gourd	carcarB264
Carg10078	Cucurbita maxima (Rimu)	carcmaB0315
Carg10078	Cucurbita moschata (Rifu)	carcmoB0321
Carg10078	Cucurbita pepo (Zucchini)	carcpeB0328
Carg10078	Watermelon (Charleston Gray)	carwcgB0220
Carg10078	Watermelon (97103) v1	carwmB0215
Carg10078	Watermelon (97103) v2	carwmbB0229
Carg10078	Watermelon (97103) v2	carwmbB0235
Carg10078	Wax gourd	carwgoB0284