Carg10951 (gene) Silver-seed gourd

Overview
NameCarg10951
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionBet1-like snare 1-1
LocationCucurbita_argyrosperma_scaffold_027 : 40490 .. 44037 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAAAAGGGTATTCAATTTTCTTCGAACCCAGTGCTGATTTCTTTCTCTTGTCCTCATTTCTCCGGTACACGAACGGAATAGATTTTTCTCGCGATCGGTTATTGTCTCAATTGGATTTTTCCGTCGATCAAATCGAATATTTCTGTACAATTTGGAACTAATTGTGGCGGAAGAGCAACGCATTTCGCAGAACTGAGCCCGTGATGAGTTACAGAAGGTTCGTATCCGAAATTTTAGTCAATTCCGAGTTCTTTTCTCGGTTATACGCTCAAAATTCACTTGAAGTGATTTAATTATTCCATGAGATTTTTCCGCTGCAATGTGAACTTATGATTTGGATCTGAGGACCTTTTTTTGGTTAAACTGAATAAGCTTCCGTTAGCGCCTGAAATTCTGATTATTACCTTTTTTTTATTGTCAATTCGTTGATTAACTCGCGTGGAGTTTCTGTGATCTTATATTTGGTAGCTTTTGTATGAATTTGGTTCTGATCTTGTGTTGTATTTTGAGTATGCCGTATATTTGAGCTTTTAATGATGCAATTTGGGATAAAACAGAGTTTAAACTATAGAGCAGATCATTGCACCGATTTTGTATGATAAAATGCGGTTTTCGATCTTGATGCATAACCGCGAGACAGAAGTGTGAAACCTATGATGAATTAAAAAGCTGCAAATGATTATTAGATTTTCTGCTGTGGTTTTAAGTTTTCGTGCATATTTTGAGAAGTAATTTGAATGAAAGCATAATGAGGTGAAATATCTCCGCAGTTCTGTAATTCTGGATGTTGGGGTCTATTAATCGGTCTGCGTCTTCCTCCTTGGTAATATGGAGTTAAATCGTAGTCTATTTTGGTTTTATTGATTAGATTTTGTTATACACATATGTTACTCTTGAATACTCGTATCTCATTTTTTATACCACATATCTTATTTCATTTGAAATAACTGGTATCGATTTTGTTCATAGAGAGCACCGTTCTTCTAGATCTGCACTCTTTGATGACCTTGAGGAGGGTGGTCTCAGAGCTAGCGCTTCTGCGGTTGAAATTAAAGAGCATGACAATGATAGAGCGCTCCTCACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGGTTAGTTTTAAGCAGGGAAATTTTCCTTAATTATTTATTTATCTATGTCTGATCTGTCTTTATTATAATCTCCTGGCCGTTTTACTTAGCAAGCTGTTTTTATTTTTTTTTAATTATAAACAATCATTTTGGCATTGGGATCTTGTAGCTGTTTCCTTGTTGCTGCATGCGCATAATTTATTGTTTCAGATCCTTTTGCAATTCATCGATTCATCCTTTTGCCTCAGATTCTTTAACCATTAGACAAAAATGATTAGGAAAATGGATATGAAGTGTATTCTTTGAGAATTTCTTCAGCTGTATTTATGCATCTAAGCATCCATATTTAGTAATATAATGAGCTCATTTCAAGTATGATTCTTGCCTGAAAGTGCCTTTGATGCAATAGACTGTTGTGCTTTCTGGGATAAGTGAACTAGTTGATATTGACTTTTGAGTGGGTTTAGTTAGTTTATGTTCAGGTTGGACATAGTGGTAGAACACTTGGAGTTAATAAATAATGATAAAGCGAACTCTTAGATTATGGGTCCAAATTTCCTTGTAATGACTAATGATATAGTAATTTTCAGTTTCTCACTGCTTACAGTGGTGAATTTCTAGGAATAGAAATACTTTTGAGGATTGCTGAAGTATCAGATTTGGATTTTCCAGTGTGGAAAAAAACTTACATATATGATTTCATCACATAGTACTTAAAGTAACACTTCACTTCATGTCGATCAGCTTAAATGATCACTATATAGCTCCATCTCTTAATATGCATATTATTTGAAATAGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATAATTTACTTGACCGAATGGTATGTTGTTTCTTCAAGGTTATTTGTTTGTGTTTTGTCAGTGGAAAATGATAGGAGCATCTTCATATGGATTTTATTCTAATCCAGGGAAATGGCATGGATTCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTACATGATCTAATCCTTTTTGAGTTCGTCATGTTTAGGGAATGTTTTTGTTCGTTACGTACCCTTTATAGGGAGAAAGAAAATGAAGAGAAATTGAGAGAGCTTTTGCAAACAACCATATATGTTCCAGAAAGTAAAATGATACAGAAAATCCAGTCCTAGAAATATGATAGAACATTCCTTGATCTTTTAAACGTCTACTACTTCCATGCATCCTCCTAATTTTTCCAAGTTCTCAATGTACATGTTCTGTAGGTTTTTGAGCAAAAATCGAAGTGGAGAACTTGTAGACTTGCAGTTTATTTTGTATTGTCCTTCTTACTTCTTTTCTATCTCATCAGGTAAGGGTTCAGCTCAACATTTCACTTTGATCATCTACTTTTTCCAACATTACTTTTTCCAACGTAATCCATGTTGTTTGATGAGCCTGAATTACATATTTACACCATTTTATCGAGTTCTTTCAAATTTCATTGCATTTTTCATTTACATTGTTATATAACAGGCTCACAACCATGTTTAATCAAGTGAAATCTGGTAAAGCTTGGTTGAATGTTCAGTTTTCCTTTTATACAGTAGTGAATGCAATTTTGATATCCTTCTCTCTCTTGCATTACAATTTTGGTTTTTAGATTGATTTCCCCATTTTTGTCTTTGATTTCAGGTTCCTCAGATTCTTCATGCAAAGTTAAAGTAAGATTTGTACGTCGAGTCAACTCAACGTGACGTATTAGATGCATCGCATGATTGTTCCCACCTCGCATAGTCCTTGTCTTTGCAAGAACATTGGAACACAGGCCACACGATTCTGCAACACAAGACTTGCCAAAAATACATATTTTTAATGGACTGGAACAGGTCAATAAATGGCCCCCTTTCTTCTTTTTCTTTTTATTGTTTGCTTATTATTATTGTTACTATTTTTTGACGAGCTAAAATCATATCCATGGGTTTAGAATATATACTGCATTCAACCAGTAATAGGTACATAAAAAGAGTGTTCTTTTTGCTCATGCTTTTGAATGAAAGAAGGTTTTTATTTTCAGGATAATGTAAGACAAGACACTTCCCATCTTACTAGACTACTTCAATAGGTTTGTAGGTGATTTGGTTTGATGATTAGGATTAGTAGGTCAAATGATGATTGTTATTTTGAATTCTTTTTGTGATGCAATTAGTGGTAAGCTATTTAACATTATCTAAACTTATAATGTGTTTTAAACATTAAATTGGGATTTGTTGTTGCTTTTTGTTTTTGGAAGTATATAAGAAACAAGAGTAGAAGGATGTAGATTCATTAGCTTTCGAAGTATTAGAAGTCTCTTGCCTCATCTTAGTGCCTACATACAACATGTATGCATGTTTAACTTACATGTCTAACTTGATTATAGGGGTTAATTACTGGCTTTTTTAATATTAAATTTTTTCCAAAGTGTTTTTTTTTCTTCTTT

mRNA sequence

AGGAAAAGGGTATTCAATTTTCTTCGAACCCAGTGCTGATTTCTTTCTCTTGTCCTCATTTCTCCGGTACACGAACGGAATAGATTTTTCTCGCGATCGGTTATTGTCTCAATTGGATTTTTCCGTCGATCAAATCGAATATTTCTGTACAATTTGGAACTAATTGTGGCGGAAGAGCAACGCATTTCGCAGAACTGAGCCCGTGATGAGTTACAGAAGAGAGCACCGTTCTTCTAGATCTGCACTCTTTGATGACCTTGAGGAGGGTGGTCTCAGAGCTAGCGCTTCTGCGGTTGAAATTAAAGAGCATGACAATGATAGAGCGCTCCTCACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATAATTTACTTGACCGAATGGGAAATGGCATGGATTCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTTTTTGAGCAAAAATCGAAGTGGAGAACTTGTAGACTTGCAGTTTATTTTGTATTGTCCTTCTTACTTCTTTTCTATCTCATCAGGCTCACAACCATGTTTAATCAAGTGAAATCTGGTTCCTCAGATTCTTCATGCAAAGTTAAAGTAAGATTTGTACGTCGAGTCAACTCAACGTGACGTATTAGATGCATCGCATGATTGTTCCCACCTCGCATAGTCCTTGTCTTTGCAAGAACATTGGAACACAGGCCACACGATTCTGCAACACAAGACTTGCCAAAAATACATATTTTTAATGGACTGGAACAGGTCAATAAATGGCCCCCTTTCTTCTTTTTCTTTTTATTGTTTGCTTATTATTATTGTTACTATTTTTTGACGAGCTAAAATCATATCCATGGGTTTAGAATATATACTGCATTCAACCAGTAATAGGTACATAAAAAGAGTGTTCTTTTTGCTCATGCTTTTGAATGAAAGAAGGTTTTTATTTTCAGGATAATGTAAGACAAGACACTTCCCATCTTACTAGACTACTTCAATAGGTTTGTAGGTGATTTGGTTTGATGATTAGGATTAGTAGGTCAAATGATGATTGTTATTTTGAATTCTTTTTGTGATGCAATTAGTGGTAAGCTATTTAACATTATCTAAACTTATAATGTGTTTTAAACATTAAATTGGGATTTGTTGTTGCTTTTTGTTTTTGGAAGTATATAAGAAACAAGAGTAGAAGGATGTAGATTCATTAGCTTTCGAAGTATTAGAAGTCTCTTGCCTCATCTTAGTGCCTACATACAACATGTATGCATGTTTAACTTACATGTCTAACTTGATTATAGGGGTTAATTACTGGCTTTTTTAATATTAAATTTTTTCCAAAGTGTTTTTTTTTCTTCTTT

Coding sequence (CDS)

ATGAGTTACAGAAGAGAGCACCGTTCTTCTAGATCTGCACTCTTTGATGACCTTGAGGAGGGTGGTCTCAGAGCTAGCGCTTCTGCGGTTGAAATTAAAGAGCATGACAATGATAGAGCGCTCCTCACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATAATTTACTTGACCGAATGGGAAATGGCATGGATTCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTTTTTGAGCAAAAATCGAAGTGGAGAACTTGTAGACTTGCAGTTTATTTTGTATTGTCCTTCTTACTTCTTTTCTATCTCATCAGGCTCACAACCATGTTTAATCAAGTGAAATCTGGTTCCTCAGATTCTTCATGCAAAGTTAAAGTAAGATTTGTACGTCGAGTCAACTCAACGTGA

Protein sequence

MSYRREHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYLIRLTTMFNQVKSGSSDSSCKVKVRFVRRVNST
Homology
[Close]
BLAST of Carg10951 vs. NCBI nr
Match: XP_022930222.1 (bet1-like SNARE 1-2 [Cucurbita moschata] >XP_023000563.1 bet1-like SNARE 1-2 [Cucurbita maxima] >XP_023513654.1 bet1-like SNARE 1-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.3 bits (599), Expect = 1.3e-58
Identity = 123/128 (96.09%), Postives = 123/128 (96.09%), Query Frame = 0 

Query: 1   MSYRREHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGDIHE 60
           MSYRREHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGDIHE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGDIHE 60

Query: 61  EVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYLI 120
           EVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYLI
Sbjct: 61  EVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYLI 120

Query: 121 RLTTMFNQ 129
           R    F Q
Sbjct: 121 RFLRFFMQ 128

[Close]
BLAST of Carg10951 vs. NCBI nr
Match: XP_008447527.1 (PREDICTED: bet1-like SNARE 1-2 [Cucumis melo])

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 112/128 (87.50%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 1   MSYRREHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGDIHE 60
           MSYRREHRSSRSALFDDLEEGGLR S S+VEIKEHDND+AL TLEDRVSILKRLTGDIHE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTS-SSVEIKEHDNDKALHTLEDRVSILKRLTGDIHE 60

Query: 61  EVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYLI 120
           EVESHN+LLDRMGNGMD+SRGIMSRTMDRFKMVFEQK+KWRTCRLA+YF+LSFLL FYLI
Sbjct: 61  EVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLI 120

Query: 121 RLTTMFNQ 129
           R    F Q
Sbjct: 121 RFLRYFMQ 127

[Close]
BLAST of Carg10951 vs. NCBI nr
Match: XP_022138310.1 (bet1-like SNARE 1-2 [Momordica charantia])

HSP 1 Score: 214.5 bits (545), Expect = 2.4e-52
Identity = 113/128 (88.28%), Postives = 118/128 (92.19%), Query Frame = 0 

Query: 1   MSYRREHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGDIHE 60
           M+YRREHRSSRSALFDDLEEGGLR S S+VEIKEHDND+AL +LEDRVSILKRLTGDIHE
Sbjct: 2   MNYRREHRSSRSALFDDLEEGGLRTS-SSVEIKEHDNDKALHSLEDRVSILKRLTGDIHE 61

Query: 61  EVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYLI 120
           EVESHNNLLDRMGNGMD+SRGIMSRTMDRFKMVFEQK KWRTCRLAVYFVLSF LLFYLI
Sbjct: 62  EVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKIKWRTCRLAVYFVLSFFLLFYLI 121

Query: 121 RLTTMFNQ 129
           R    F Q
Sbjct: 122 RFLRYFMQ 128

[Close]
BLAST of Carg10951 vs. NCBI nr
Match: XP_004151397.1 (PREDICTED: bet1-like SNARE 1-2 isoform X1 [Cucumis sativus] >KGN58055.1 hypothetical protein Csa_3G469700 [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 2.7e-51
Identity = 112/128 (87.50%), Postives = 118/128 (92.19%), Query Frame = 0 

Query: 1   MSYRREHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGDIHE 60
           MSYRREHRSSRSALFDDLEEGGLR S S+VEIKEHDND+AL TLEDRVSILKRLTGDIHE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTS-SSVEIKEHDNDKALHTLEDRVSILKRLTGDIHE 60

Query: 61  EVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYLI 120
           EVESHN+LLDRMGNGMD+SRGIMSRTMDRFKMVFEQK+KWRTCRLA+YFVLSFLLL  LI
Sbjct: 61  EVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXLI 120

Query: 121 RLTTMFNQ 129
           R    F Q
Sbjct: 121 RFLRYFMQ 127

[Close]
BLAST of Carg10951 vs. NCBI nr
Match: XP_011030529.1 (PREDICTED: bet1-like SNARE 1-2 [Populus euphratica])

HSP 1 Score: 171.8 bits (434), Expect = 1.8e-39
Identity = 93/130 (71.54%), Postives = 109/130 (83.85%), Query Frame = 0 

Query: 1   MSYRREHRSSRSALFDD-LEEGGLRASAS-AVEIKEHDNDRALLTLEDRVSILKRLTGDI 60
           MSYRREHR+SR+ALFDD LEEGGLR+S+S + E  +HDND+A+ TL+DRV  LKRLTGDI
Sbjct: 1   MSYRREHRNSRTALFDDGLEEGGLRSSSSFSHETDDHDNDKAVHTLQDRVLFLKRLTGDI 60

Query: 61  HEEVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFY 120
           HEEVES N LLDRMGN MD+SRGIMS TMDRFKMVFE+KS  RTC LA +F+LSFL+L+Y
Sbjct: 61  HEEVESQNRLLDRMGNNMDTSRGIMSGTMDRFKMVFEKKSSRRTCALAGFFILSFLILYY 120

Query: 121 LIRLTTMFNQ 129
           LIR+     Q
Sbjct: 121 LIRVLVYLKQ 130

[Close]
BLAST of Carg10951 vs. TAIR10
Match: AT4G14455.1 (Target SNARE coiled-coil domain protein)

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-35
Identity = 79/125 (63.20%), Postives = 102/125 (81.60%), Query Frame = 0 

Query: 1   MSYRREHRSSRSALF---DDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGD 60
           M++RRE+R+SR++LF   D LEEG LRAS+S     E DND AL  L+DRVS LKR+TGD
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAH-DERDNDEALENLQDRVSFLKRVTGD 60

Query: 61  IHEEVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLF 120
           IHEEVE+HN LLD++GN MDS+RGIMS T++RFK+VFE+KS  ++C+L  YFVL FL+++
Sbjct: 61  IHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIMY 120

Query: 121 YLIRL 123
           YLIRL
Sbjct: 121 YLIRL 124

[Close]
BLAST of Carg10951 vs. TAIR10
Match: AT3G58170.1 (BET1P/SFT1P-like protein 14A)

HSP 1 Score: 135.2 bits (339), Expect = 3.4e-32
Identity = 74/122 (60.66%), Postives = 94/122 (77.05%), Query Frame = 0 

Query: 1   MSYRREHRSSRSALFDDLEEGGLRASAS-AVEIKEHDNDRALLTLEDRVSILKRLTGDIH 60
           M+ RRE R  RS+LFD +EEGG+RA++S + EI EH+N+RAL  L+DRV +LKRL+GDI+
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKRLSGDIN 60

Query: 61  EEVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYL 120
           EEV++HN +LDRMGN MDSSRG +S TMDRFK VFE KS  R   L   FV  FL+++YL
Sbjct: 61  EEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYL 120

Query: 121 IR 122
            R
Sbjct: 121 TR 122

[Close]
BLAST of Carg10951 vs. Swiss-Prot
Match: sp|Q94CG2|BET12_ARATH (Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4)

HSP 1 Score: 146.4 bits (368), Expect = 2.6e-34
Identity = 79/125 (63.20%), Postives = 102/125 (81.60%), Query Frame = 0 

Query: 1   MSYRREHRSSRSALF---DDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGD 60
           M++RRE+R+SR++LF   D LEEG LRAS+S     E DND AL  L+DRVS LKR+TGD
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAH-DERDNDEALENLQDRVSFLKRVTGD 60

Query: 61  IHEEVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLF 120
           IHEEVE+HN LLD++GN MDS+RGIMS T++RFK+VFE+KS  ++C+L  YFVL FL+++
Sbjct: 61  IHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIMY 120

Query: 121 YLIRL 123
           YLIRL
Sbjct: 121 YLIRL 124

[Close]
BLAST of Carg10951 vs. Swiss-Prot
Match: sp|Q9M2J9|BET11_ARATH (Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.1e-31
Identity = 74/122 (60.66%), Postives = 94/122 (77.05%), Query Frame = 0 

Query: 1   MSYRREHRSSRSALFDDLEEGGLRASAS-AVEIKEHDNDRALLTLEDRVSILKRLTGDIH 60
           M+ RRE R  RS+LFD +EEGG+RA++S + EI EH+N+RAL  L+DRV +LKRL+GDI+
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKRLSGDIN 60

Query: 61  EEVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYL 120
           EEV++HN +LDRMGN MDSSRG +S TMDRFK VFE KS  R   L   FV  FL+++YL
Sbjct: 61  EEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYL 120

Query: 121 IR 122
            R
Sbjct: 121 TR 122

[Close]
BLAST of Carg10951 vs. Swiss-Prot
Match: sp|O35623|BET1_MOUSE (BET1 homolog OS=Mus musculus OX=10090 GN=Bet1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.6e-05
Identity = 26/89 (29.21%), Postives = 51/89 (57.30%), Query Frame = 0 

Query: 34  EHDNDRALLTLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMV 93
           E +NDR   +L  +V+ +K L+ +I  EV++ N LL  M +  DS+ G + +TM R K++
Sbjct: 29  EEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNKLLAEMDSQFDSTTGFLGKTMGRLKIL 88

Query: 94  FEQKSKWRTCRLAVYFVLSFLLLFYLIRL 123
                    C + ++ +  F +++++I+L
Sbjct: 89  SRGSQTKLLCYMMLFSLFVFFVIYWIIKL 117

[Close]
BLAST of Carg10951 vs. Swiss-Prot
Match: sp|Q62896|BET1_RAT (BET1 homolog OS=Rattus norvegicus OX=10116 GN=Bet1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.6e-05
Identity = 26/89 (29.21%), Postives = 51/89 (57.30%), Query Frame = 0 

Query: 34  EHDNDRALLTLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMV 93
           E +NDR   +L  +V+ +K L+ +I  EV++ N LL  M +  DS+ G + +TM R K++
Sbjct: 29  EEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNKLLAEMDSQFDSTTGFLGKTMGRLKIL 88

Query: 94  FEQKSKWRTCRLAVYFVLSFLLLFYLIRL 123
                    C + ++ +  F +++++I+L
Sbjct: 89  SRGSQTKLLCYMMLFSLFVFFVIYWIIKL 117

[Close]
BLAST of Carg10951 vs. Swiss-Prot
Match: sp|O15155|BET1_HUMAN (BET1 homolog OS=Homo sapiens OX=9606 GN=BET1 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.3e-04
Identity = 24/89 (26.97%), Postives = 51/89 (57.30%), Query Frame = 0 

Query: 34  EHDNDRALLTLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMV 93
           E +N+R   +L  +V+ +K L+ +I  EV++ N LL  M +  DS+ G + +TM + K++
Sbjct: 29  EEENERLTESLRSKVTAIKSLSIEIGHEVKTQNKLLAEMDSQFDSTTGFLGKTMGKLKIL 88

Query: 94  FEQKSKWRTCRLAVYFVLSFLLLFYLIRL 123
                    C + ++ +  F +++++I+L
Sbjct: 89  SRGSQTKLLCYMMLFSLFVFFIIYWIIKL 117

[Close]
BLAST of Carg10951 vs. TrEMBL
Match: tr|A0A1S3BHN2|A0A1S3BHN2_CUCME (bet1-like SNARE 1-2 OS=Cucumis melo OX=3656 GN=LOC103489954 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.2e-52
Identity = 112/128 (87.50%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 1   MSYRREHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGDIHE 60
           MSYRREHRSSRSALFDDLEEGGLR S S+VEIKEHDND+AL TLEDRVSILKRLTGDIHE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTS-SSVEIKEHDNDKALHTLEDRVSILKRLTGDIHE 60

Query: 61  EVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYLI 120
           EVESHN+LLDRMGNGMD+SRGIMSRTMDRFKMVFEQK+KWRTCRLA+YF+LSFLL FYLI
Sbjct: 61  EVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLI 120

Query: 121 RLTTMFNQ 129
           R    F Q
Sbjct: 121 RFLRYFMQ 127

[Close]
BLAST of Carg10951 vs. TrEMBL
Match: tr|A0A0A0L808|A0A0A0L808_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G469700 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.8e-51
Identity = 112/128 (87.50%), Postives = 118/128 (92.19%), Query Frame = 0 

Query: 1   MSYRREHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGDIHE 60
           MSYRREHRSSRSALFDDLEEGGLR S S+VEIKEHDND+AL TLEDRVSILKRLTGDIHE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTS-SSVEIKEHDNDKALHTLEDRVSILKRLTGDIHE 60

Query: 61  EVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYLI 120
           EVESHN+LLDRMGNGMD+SRGIMSRTMDRFKMVFEQK+KWRTCRLA+YFVLSFLLL  LI
Sbjct: 61  EVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXLI 120

Query: 121 RLTTMFNQ 129
           R    F Q
Sbjct: 121 RFLRYFMQ 127

[Close]
BLAST of Carg10951 vs. TrEMBL
Match: tr|A0A2P4J077|A0A2P4J077_QUESU (Bet1-like snare 1-1 OS=Quercus suber OX=58331 GN=CFP56_44152 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.2e-38
Identity = 89/127 (70.08%), Postives = 105/127 (82.68%), Query Frame = 0 

Query: 1   MSYRREHRSSRSALFDDLEEGGLRASAS-AVEIKEHDNDRALLTLEDRVSILKRLTGDIH 60
           MSYRREHR SRS+LFD LEEGGL AS+S + E  +HDNDRA+ +L+DRV +LKR+TGDIH
Sbjct: 1   MSYRREHRGSRSSLFDGLEEGGLSASSSYSHETNDHDNDRAVDSLQDRVLLLKRVTGDIH 60

Query: 61  EEVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYL 120
           EEVESHN LLDRMGN MDSSRG+MS TMDRFKMVFE+KS  R C L + FV+SFL++ YL
Sbjct: 61  EEVESHNCLLDRMGNDMDSSRGVMSGTMDRFKMVFEKKSNRRMCTLVICFVVSFLIILYL 120

Query: 121 IRLTTMF 127
           IR+   F
Sbjct: 121 IRMVRYF 127

[Close]
BLAST of Carg10951 vs. TrEMBL
Match: tr|A0A2C9UCY0|A0A2C9UCY0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G038000 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.2e-37
Identity = 91/123 (73.98%), Postives = 105/123 (85.37%), Query Frame = 0 

Query: 1   MSYRREHRSSRSALFDD-LEEGGLRASAS-AVEIKEHDNDRALLTLEDRVSILKRLTGDI 60
           MSYRR+ R+SRSA+FDD LEEGGLRAS+S +  I EHDND+A+ +L+DRV  LKRLTGDI
Sbjct: 1   MSYRRDIRNSRSAIFDDGLEEGGLRASSSYSHSINEHDNDKAIDSLQDRVIFLKRLTGDI 60

Query: 61  HEEVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFY 120
           HEEVESHN LLDRMGN MD SRGIMS TMDRFKMVFE+KS  RTC LA  FV+SFL+++Y
Sbjct: 61  HEEVESHNRLLDRMGNKMDISRGIMSGTMDRFKMVFEKKSGRRTCILAGVFVVSFLIIYY 120

Query: 121 LIR 122
           LIR
Sbjct: 121 LIR 123

[Close]
BLAST of Carg10951 vs. TrEMBL
Match: tr|A0A061ENL7|A0A061ENL7_THECC (Target SNARE coiled-coil domain protein OS=Theobroma cacao OX=3641 GN=TCM_020824 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.2e-37
Identity = 88/126 (69.84%), Postives = 107/126 (84.92%), Query Frame = 0 

Query: 1   MSYRREHRSSRSAL---FDDLEEGGLRASAS-AVEIKEHDNDRALLTLEDRVSILKRLTG 60
           MSYRR+HRSS+SAL   FD LEEGGLR+S+S + EIKEH ND+A+ +L+DRV+ LKRLTG
Sbjct: 1   MSYRRDHRSSKSALFDGFDKLEEGGLRSSSSFSHEIKEHHNDKAVDSLQDRVAFLKRLTG 60

Query: 61  DIHEEVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLL 120
           DIH+EVESHN LLDRMGNGMD++RGIMS TMDRFK VFE+KS  R C L   FV+SFL++
Sbjct: 61  DIHDEVESHNRLLDRMGNGMDATRGIMSGTMDRFKKVFEKKSNRRMCTLVGGFVVSFLII 120

Query: 121 FYLIRL 123
           +YLIR+
Sbjct: 121 YYLIRM 126

The following BLAST results are available for this feature:
BLAST of Carg10951 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022930222.11.3e-5896.09bet1-like SNARE 1-2 [Cucurbita moschata] >XP_023000563.1 bet1-like SNARE 1-2 [Cu... [more]
XP_008447527.11.8e-5287.50PREDICTED: bet1-like SNARE 1-2 [Cucumis melo][more]
XP_022138310.12.4e-5288.28bet1-like SNARE 1-2 [Momordica charantia][more]
XP_004151397.12.7e-5187.50PREDICTED: bet1-like SNARE 1-2 isoform X1 [Cucumis sativus] >KGN58055.1 hypothet... [more]
XP_011030529.11.8e-3971.54PREDICTED: bet1-like SNARE 1-2 [Populus euphratica][more]
BLAST of Carg10951 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14455.11.5e-3563.20Target SNARE coiled-coil domain protein[more]
AT3G58170.13.4e-3260.66BET1P/SFT1P-like protein 14A[more]
BLAST of Carg10951 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94CG2|BET12_ARATH2.6e-3463.20Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4[more]
sp|Q9M2J9|BET11_ARATH6.1e-3160.66Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1[more]
sp|O35623|BET1_MOUSE2.6e-0529.21BET1 homolog OS=Mus musculus OX=10090 GN=Bet1 PE=1 SV=1[more]
sp|Q62896|BET1_RAT2.6e-0529.21BET1 homolog OS=Rattus norvegicus OX=10116 GN=Bet1 PE=1 SV=1[more]
sp|O15155|BET1_HUMAN1.3e-0426.97BET1 homolog OS=Homo sapiens OX=9606 GN=BET1 PE=1 SV=1[more]
BLAST of Carg10951 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BHN2|A0A1S3BHN2_CUCME1.2e-5287.50bet1-like SNARE 1-2 OS=Cucumis melo OX=3656 GN=LOC103489954 PE=4 SV=1[more]
tr|A0A0A0L808|A0A0A0L808_CUCSA1.8e-5187.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G469700 PE=4 SV=1[more]
tr|A0A2P4J077|A0A2P4J077_QUESU2.2e-3870.08Bet1-like snare 1-1 OS=Quercus suber OX=58331 GN=CFP56_44152 PE=4 SV=1[more]
tr|A0A2C9UCY0|A0A2C9UCY0_MANES4.2e-3773.98Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G038000 PE=4 SV=... [more]
tr|A0A061ENL7|A0A061ENL7_THECC7.2e-3769.84Target SNARE coiled-coil domain protein OS=Theobroma cacao OX=3641 GN=TCM_020824... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10951-RACarg10951-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 26..93
e-value: 0.0044
score: 26.2
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 31..93
score: 12.135
NoneNo IPR availableGENE3DG3DSA:1.20.5.110coord: 38..101
e-value: 6.2E-14
score: 53.7
NoneNo IPR availablePANTHERPTHR12791GOLGI SNARE BET1-RELATEDcoord: 1..127
NoneNo IPR availablePANTHERPTHR12791:SF36BET1-LIKE SNARE 1-2coord: 1..127
NoneNo IPR availableCDDcd15853SNARE_Bet1coord: 34..91
e-value: 5.0364E-18
score: 72.9206
NoneNo IPR availableSUPERFAMILYSSF58038SNARE fusion complexcoord: 31..93

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg10951Cla005996Watermelon (97103) v1carwmB1073
Carg10951Cla007568Watermelon (97103) v1carwmB1077
Carg10951ClCG06G006820Watermelon (Charleston Gray)carwcgB1046
Carg10951ClCG07G000890Watermelon (Charleston Gray)carwcgB1050
Carg10951CmaCh19G000760Cucurbita maxima (Rimu)carcmaB1491
Carg10951CmaCh08G010960Cucurbita maxima (Rimu)carcmaB1495
Carg10951CmaCh02G017580Cucurbita maxima (Rimu)carcmaB1492
Carg10951CmoCh19G000870Cucurbita moschata (Rifu)carcmoB1449
Carg10951CmoCh02G018030Cucurbita moschata (Rifu)carcmoB1450
Carg10951Lsi05G009990Bottle gourd (USVL1VR-Ls)carlsiB984
Carg10951Lsi09G012510Bottle gourd (USVL1VR-Ls)carlsiB981
Carg10951Cp4.1LG05g01310Cucurbita pepo (Zucchini)carcpeB1506
Carg10951Cp4.1LG17g01840Cucurbita pepo (Zucchini)carcpeB1503
Carg10951Cp4.1LG15g00620Cucurbita pepo (Zucchini)carcpeB1502
Carg10951Cla97C06G116420Watermelon (97103) v2carwmbB1133
Carg10951Cla97C07G129170Watermelon (97103) v2carwmbB1137
Carg10951Bhi12G001457Wax gourdcarwgoB1265
Carg10951Bhi05G000171Wax gourdcarwgoB1271
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg10951Carg16867Silver-seed gourdcarcarB601
Carg10951Carg08974Silver-seed gourdcarcarB615
The following block(s) are covering this gene:
GeneOrganismBlock
Carg10951Silver-seed gourdcarcarB267
Carg10951Silver-seed gourdcarcarB275
Carg10951Silver-seed gourdcarcarB649
Carg10951Cucumber (Gy14) v2carcgybB1056
Carg10951Cucumber (Gy14) v2carcgybB1059
Carg10951Cucumber (Gy14) v1carcgyB1190
Carg10951Cucumber (Gy14) v1carcgyB1195
Carg10951Cucurbita maxima (Rimu)carcmaB1485
Carg10951Cucurbita maxima (Rimu)carcmaB1489
Carg10951Cucurbita moschata (Rifu)carcmoB1443
Carg10951Cucurbita moschata (Rifu)carcmoB1448
Carg10951Cucurbita moschata (Rifu)carcmoB1451
Carg10951Cucurbita moschata (Rifu)carcmoB1452
Carg10951Cucurbita pepo (Zucchini)carcpeB1501
Carg10951Cucurbita pepo (Zucchini)carcpeB1504
Carg10951Cucurbita pepo (Zucchini)carcpeB1507
Carg10951Wild cucumber (PI 183967)carcpiB1112
Carg10951Wild cucumber (PI 183967)carcpiB1115
Carg10951Cucumber (Chinese Long) v2carcuB1090
Carg10951Cucumber (Chinese Long) v2carcuB1093
Carg10951Cucumber (Chinese Long) v3carcucB1123
Carg10951Cucumber (Chinese Long) v3carcucB1126
Carg10951Bottle gourd (USVL1VR-Ls)carlsiB983
Carg10951Melon (DHL92) v3.5.1carmeB1046
Carg10951Melon (DHL92) v3.5.1carmeB1050
Carg10951Melon (DHL92) v3.6.1carmedB1060
Carg10951Melon (DHL92) v3.6.1carmedB1064
Carg10951Watermelon (Charleston Gray)carwcgB1045
Carg10951Watermelon (97103) v1carwmB1075
Carg10951Watermelon (97103) v2carwmbB1131