Carg10940 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTATTGGCTTGCGAGCACCGACGACAGGCTCCCGGCTGCCAACATCGACGCTACACTCTCTTCACCCATCTCTTCGCTGGCTACGCTCAACTCAACTCTGATACCTACCAAGTCACCATCGATCCTTCACACCTCATCCTCATCGATCAGTTTTTCTTCAACCGTCAACTCAGCAACCCTGAGGTGAAGACTCTGTTGTCCATTGCAGCAGACGCCGCCCTCTTCGCCGCAATGGCTGCAGACCCTACAAAAACCGCGATGCCTTCATCAAGTCCTCCATTGCTGCAGCCAGAGGCGGTGGTTCGATGGCCTCGACCTCCAGTGGCTATACCCTTCTTCTCAGGACCAAATGGACAACTTCAAAACCTTGAATCCATTCGTGGCACCAAGCGGTGGTGGACGATGCCACCAGTTTAAGCCTCCCGCAGCTGCTCCTGGTGGCCACAGTCTCCAATCTTCCCTATCTTCAGAGCAACATTCAATACCCAGCTGATGCAATCAACCAAAAGCTGGACTGGGTGAACCTCCTCTCTTATGACTTTTACACCCCTGACTCCTCCAGGGCCGCCACAGGGCCATCCTCTGCCTTCCACAAATCCCAAGGCCAATGCCCTTTCAGCTAATTTTGGGATCAGGTCGTGGGTGCAGAGCCTCCACAATCTGCCTCACAAGAAAAATCGTGTTTTGGAATTCCCTTCCACGGGTGGGCTTGGAAGCTTTTCAACTCTCACCAGCACACCCTGTTTGCTAAAGCGGATGGAGCCGCCACCGGAGAATACATTGGTCCACACGGCCAAATCTTCTACTCCGATGTGCAGAAATTTATAGAGGACAATCAGGCTGGTGTTGAGGACAAGGACAAGAGCTATCTTGTTGCCTACGCTTATTACGAGACAACCTGGATTACCTACGAGAGTGAATCATACACCATTGCCGACAAGATCGCACTCGCAAAGACCGACAAGGTTTATTGGTTACTTTGCTTTCAATCATTGCAGCCGATGACGCTTCTAACACTCTTGCTAATGCTGCCAAATCCAATTGGTGATATCTTATTGTTGAACCCTCCAATAAGAGCTATGCTCCTGCTGCTCTATGCTCTATGTCTCTATGTCTCTATGTCTCTATGTCTCTATGTCTCTGTCTCTGTCTTTTTTAATTATGTTGTACCTTGTGTGGTGTTCTAAGGGTTGAATAAAGTTTGTGGCGTGTTCCTTCCTACCAACATCCTTTCTCCATTCATTTCCATGAGTGTTCCATTACTTCTCTCTCACTTCCTTTTAGGAATCTTGTGTTGAAGATGTGTGCATGTGGCTCGAGTATTTCATGAAATAATCAATAAGTAACTCCTTAGAAAAGACCCACATAATATTATAGTGAACATAAATATCGAATTCATACTTTTATGACATAAAGGAAAAGTATCGGAGTGCAAATGACATACAAATATGCACGAGGTCTCATAACTTATGTTACCCGTCATATTATGTAATGTGAAAATACGTTTCAATTCCATAAACATTTCATAACATAACTCAATTATGCTACGTGTACACATAGGCACTATTCAACACTTTCATGACATATAATATTAACATATCAACCATAACTTTTCATAAATTCAGCACTTTCATGACAAATAATACTAACATAACAACCATAACTTTTCATAACATCATCCGTCAATATAATCCATGCATCACATAGTCATATCACATAAAATATGATACATGTAGGGGCTATAGGGCACGCACCATCATACAAAACACATAATAAGCTAATTCCAATTGTAAAGTCACTTACCTCGATGGCCTTGGCCAAAGTTACTATGTATGCATGCGAAGCCGAAACTGGAGCTACGATGTTGAGCCGAATGTGCATGCGGCCAGCGTTCTCTCCTGGGATGTGGGCTGGAGTGAGGATTAAAACAACAGGCTATTGAGTCGCAAGTATACGAGGAGACCCGACCCGAATCCAACAACTTATCTTCTTCCTTACCCGAAAAACAACGAAACCCTAATTGATCTGCCTCCCTGATTTTCGACGACGCGTTGCAGTCTCCTCCGCTTCAGACGATCACGTAGCATTCTCGACGCAGATTTTCGACGAGCACATAGTGATCCCGATGCCAATACCTTACTTCCATTTAATTCTTGCTCCAAAAATAGCAACTCTAACGTTTTGAGAATCATAGCATACATATTAAATTACATAACTAAATCCCCTATTCTTCTATAGTATTCACAAAATCATGAAAATCAGGTGTAAATGCATACTTCAAACATTCATCATGCTTACAATAATCAATTTCAGTCAATTCACTTCAAATTCCATTGTTGTCGTCGTTAAACAATCGTACAGTTGATGTCCTTTTTTTTGTGGATATATTACTAAATCGATTGGGGAGAAGAACAAAACATTCTTTATAAGGAAAAACCCATAGAGAACAATATCGACTAGCTGTAAGCTTGAACTGTTGCAATATTAAAATTTGAATCGGAAGAATTATTATATATGTTTTCTCTTTAGTATTTTTTTTTTAGATTATATTTTATTTTTTTAAAAAGAATAACAAACTGAAAAAATTACACTTTCCAATGGGGAATTTTTGTCTCTATTTCTATAAAAATAAATAGAAAATTTCGCGAAAATGGAGACGAAGGAGCCTTCCCCGTCCCTGCTAGCCCCATTATTTTTTGAAACAACTTAAAAAAGACATATAAAAAACTATATTAATTTAAAAACAATTACAAGATGACTTTAACTCTCCCACGATTCTTAAATATGGATAGAACTTCAACCCATACAATATACACATAGAATCAAAAAGACGTTGGATAAAACTTGCAAACTATACGTAATTTTCGCACATTTTAAAAGGTGCCATTGGACATTTATAAAATAAAATAAATGGAGCAGCTAATAAGACAAAACAAAGTTATATATATATATATAGTATTTATCAATGTTCAATCCCATTTACAAATTTCAAACCCATTAAAAAATTATATCCATTTTGAGGTAGTAAGCATATATGTACACAATTAAATAAATATTTGACAACGAAATCTAAATGTCGTTCGTAGCAGGTAATGAATTGGACTTATATTTACGATGAGAAATACGTATTATTGGTTCTTTTACAGATCATTGAAAGCACGTCGTGAAAAGACTGAGTTATGATCAAAATTTGTATCTTTCATAGTGGGAGATGTTAATGTAAAGTTCAAGCTTACTAGATATTGTTTGTTTTGATTTATTGCGTATCGTCATTAGCCTCACGATTTTAAAATGCATATACTAGGTAGAGGTTTCCACAGCCTTATAAGGAATGTTTCACTCCCCTCTCCAACTGATGTGGGATCTCACGGGATCCAGCATCCTCGCTGGCACACTGCCCGATGCCTATCTCTGATAGCATTTGTAACAGCCTAAACAACGTTCTCGTTGGCACACCGCCCGATACCTAGCTCTGATAGCATTTATAAAAGCCCAAACTCACTGCTAACCGATATTGTCTGTTTTAGCCAATTACATATCGTCGTCAGCCTCACAGAATTTAAATGCGTCTATTAAGAGTAGGTTTCCTATTCTTATAAGATTGGTAAGATAATAGTGATATTAAAGAAAAACTAAAGTGGAAAAAATAAAAATGTGATAAAAGTCGGTTCTATGAGGCTTAAACTAATGGATGGAACCCTAATTCAATATTAGAATAATTGAGTGCAACGCGACAAAAGAAAGTTAGATAGAACTAGTTTAATAGAATAGAAAAATAAGAAGGTTAAGGGTTTTAAATTTTAGTCTAACTTATCCACAAATTTTCATTTGTCAATGAATTCGACATCAGCGTGAAGATCGAGTTGTCATTTTCATACTCAGTGAATGTTCATGGAATCACTTAGTTTCGTCACTTTAGGTAGCCTACAAGATAACTCAATAATACAATTGAACTGATATATGCACGATGAGAGCGATCTTAAGGATATGATGATTAGAAAAGACTTATAAAAATTGGAAGTTACTATTTAGAAACTAACAAGATTGCACTTTTTTTTTCCGGTGGCTTAACTATAAGAACTCCACAGTTAAACATGCTTTGTTTGGAGTAATTTTATGTTGTGTGACCGATAGAAAATTTGTATAGGATGGATGTGAGTGAGAAGAAAACATCATAAAAGGATTCGTGTTGGTTTGAGGGAAACGCTTGGGATATCAAATACCGAATTCGGAATGTATTCGGAATGTATGGATGGTTACAATTAGAGAAGGAAGTTAATATTGAAGGTTGAGATTTGAGAGTATTATAAATATGGGATTGGTATGCCATTGTTTTACAACCAACCAACCATTGTTGATTGATATCAGAAGAAGAAAGAAAAATTGTGGATTGAAATGGCCGAGTTTGTGAATGCTGGCTACTGGCTTGCCGGTACCGACGACACGCTCCCGGCATCGAACATCGACGCTACACTTTTCACCCATCTGTTTGTTGGTTACGCTCAACTCAACTCTGATGCTCATGAAGTCACCGTTGATCCTTCACAGCTTATTCTCATCAATCAGTTTTCTTCCACCGTGAAGCTGAGTAACCCTGAGGTGAAGACTCTGTTGTCCATTGCAGGAGACACCGCT GTATTGGCTTGCGAGCACCGACGACAGGCTCCCGGCTGCCAACATCGACGCTACACTCTCTTCACCCATCTCTTCGCTGGCTACGCTCAACTCAACTCTGATACCTACCAAGTCACCATCGATCCTTCACACCTCATCCTCATCGATCAGTTTTTCTTCAACCGTCAACTCAGCAACCCTGAGGTGAAGACTCTGTTGTCCATTGCAGCAGACGCCGCCCTCTTCGCCGCAATGGCTGCAGACCCTACAAAAACCGCGATGCCTTCATCAAGTCCTCCATTGCTGCAGCCAGAGGCGGTGGTTCGATGGCCTCGACCTCCAGTGGCTATACCCTTCTTCTCAGGACCAAATGGACAACTTCAAAACCTTGAATCCATTCAGCCTCCACAATCTGCCTCACAAGAAAAATCGTGTTTTGGAATTCCCTTCCACGGGTGGGCTTGGAAGCTTTTCAACTCTCACCAGCACACCCTGTTTGCTAAAGCGGATGGAGCCGCCACCGGAGAATACATTGGTCCACACGGCCAAATCTTCTACTCCGATGTGCAGAAATTTATAGAGGACAATCAGGCTGGTGTTGAGGACAAGGACAAGAGCTATCTTGTTGCCTACGCTTATTACGAGACAACCTGGATTACCTACGAGAGTGAATCATACACCATTGCCGACAAGATCGCACTCGCAAAGACCGACAAGAAGAAGAAAGAAAAATTGTGGATTGAAATGGCCGAGTTTGTGAATGCTGGCTACTGGCTTGCCGGTACCGACGACACGCTCCCGGCATCGAACATCGACGCTACACTTTTCACCCATCTGTTTGTTGGTTACGCTCAACTCAACTCTGATGCTCATGAAGTCACCGTTGATCCTTCACAGCTTATTCTCATCAATCAGTTTTCTTCCACCGTGAAGCTGAGTAACCCTGAGGTGAAGACTCTGTTGTCCATTGCAGGAGACACCGCT GTATTGGCTTGCGAGCACCGACGACAGGCTCCCGGCTGCCAACATCGACGCTACACTCTCTTCACCCATCTCTTCGCTGGCTACGCTCAACTCAACTCTGATACCTACCAAGTCACCATCGATCCTTCACACCTCATCCTCATCGATCAGTTTTTCTTCAACCGTCAACTCAGCAACCCTGAGGTGAAGACTCTGTTGTCCATTGCAGCAGACGCCGCCCTCTTCGCCGCAATGGCTGCAGACCCTACAAAAACCGCGATGCCTTCATCAAGTCCTCCATTGCTGCAGCCAGAGGCGGTGGTTCGATGGCCTCGACCTCCAGTGGCTATACCCTTCTTCTCAGGACCAAATGGACAACTTCAAAACCTTGAATCCATTCAGCCTCCACAATCTGCCTCACAAGAAAAATCGTGTTTTGGAATTCCCTTCCACGGGTGGGCTTGGAAGCTTTTCAACTCTCACCAGCACACCCTGTTTGCTAAAGCGGATGGAGCCGCCACCGGAGAATACATTGGTCCACACGGCCAAATCTTCTACTCCGATGTGCAGAAATTTATAGAGGACAATCAGGCTGGTGTTGAGGACAAGGACAAGAGCTATCTTGTTGCCTACGCTTATTACGAGACAACCTGGATTACCTACGAGAGTGAATCATACACCATTGCCGACAAGATCGCACTCGCAAAGACCGACAAGAAGAAGAAAGAAAAATTGTGGATTGAAATGGCCGAGTTTGTGAATGCTGGCTACTGGCTTGCCGGTACCGACGACACGCTCCCGGCATCGAACATCGACGCTACACTTTTCACCCATCTGTTTGTTGGTTACGCTCAACTCAACTCTGATGCTCATGAAGTCACCGTTGATCCTTCACAGCTTATTCTCATCAATCAGTTTTCTTCCACCGTGAAGCTGAGTAACCCTGAGGTGAAGACTCTGTTGTCCATTGCAGGAGACACCGCT VLACEHRRQAPGCQHRRYTLFTHLFAGYAQLNSDTYQVTIDPSHLILIDQFFFNRQLSNPEVKTLLSIAADAALFAAMAADPTKTAMPSSSPPLLQPEAVVRWPRPPVAIPFFSGPNGQLQNLESIQPPQSASQEKSCFGIPFHGWAWKLFNSHQHTLFAKADGAATGEYIGPHGQIFYSDVQKFIEDNQAGVEDKDKSYLVAYAYYETTWITYESESYTIADKIALAKTDKKKKEKLWIEMAEFVNAGYWLAGTDDTLPASNIDATLFTHLFVGYAQLNSDAHEVTVDPSQLILINQFSSTVKLSNPEVKTLLSIAGDTA
BLAST of Carg10940 vs. NCBI nr
Match: XP_022946077.1 (acidic mammalian chitinase-like [Cucurbita moschata] >XP_022946671.1 acidic mammalian chitinase-like [Cucurbita moschata]) HSP 1 Score: 264.2 bits (674), Expect = 5.6e-67 Identity = 164/302 (54.30%), Postives = 180/302 (59.60%), Query Frame = 0
BLAST of Carg10940 vs. NCBI nr
Match: XP_023521369.1 (acidic mammalian chitinase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64 Identity = 159/302 (52.65%), Postives = 179/302 (59.27%), Query Frame = 0
BLAST of Carg10940 vs. NCBI nr
Match: XP_023545402.1 (acidic mammalian chitinase-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64 Identity = 159/302 (52.65%), Postives = 179/302 (59.27%), Query Frame = 0
BLAST of Carg10940 vs. NCBI nr
Match: XP_022999577.1 (chitotriosidase-1-like [Cucurbita maxima]) HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64 Identity = 158/302 (52.32%), Postives = 173/302 (57.28%), Query Frame = 0
BLAST of Carg10940 vs. NCBI nr
Match: XP_022999580.1 (chitotriosidase-1-like [Cucurbita maxima]) HSP 1 Score: 253.1 bits (645), Expect = 1.3e-63 Identity = 157/302 (51.99%), Postives = 176/302 (58.28%), Query Frame = 0
BLAST of Carg10940 vs. TAIR10
Match: AT4G19750.1 (Glycosyl hydrolase family protein with chitinase insertion domain) HSP 1 Score: 73.6 bits (179), Expect = 2.6e-13 Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of Carg10940 vs. TAIR10
Match: AT4G19800.1 (Glycosyl hydrolase family protein with chitinase insertion domain) HSP 1 Score: 68.9 bits (167), Expect = 6.3e-12 Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Carg10940 vs. TAIR10
Match: AT4G19810.1 (Glycosyl hydrolase family protein with chitinase insertion domain) HSP 1 Score: 67.4 bits (163), Expect = 1.8e-11 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Carg10940 vs. TAIR10
Match: AT4G19730.1 (Glycosyl hydrolase superfamily protein) HSP 1 Score: 64.7 bits (156), Expect = 1.2e-10 Identity = 33/79 (41.77%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of Carg10940 vs. TAIR10
Match: AT4G19760.1 (Glycosyl hydrolase family protein with chitinase insertion domain) HSP 1 Score: 63.9 bits (154), Expect = 2.0e-10 Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 0
BLAST of Carg10940 vs. Swiss-Prot
Match: sp|O81862|CHIC_ARATH (Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.3e-10 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Carg10940 vs. TrEMBL
Match: tr|A0A0A0LL51|A0A0A0LL51_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008760 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.0e-16 Identity = 94/308 (30.52%), Postives = 124/308 (40.26%), Query Frame = 0
BLAST of Carg10940 vs. TrEMBL
Match: tr|Q8S2V9|Q8S2V9_MOMCH (Class V chitinase OS=Momordica charantia OX=3673 GN=Chi5 PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.3e-15 Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 0
BLAST of Carg10940 vs. TrEMBL
Match: tr|A0A1S4DZW4|A0A1S4DZW4_CUCME (uncharacterized protein LOC107991275 OS=Cucumis melo OX=3656 GN=LOC107991275 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 2.4e-13 Identity = 43/93 (46.24%), Postives = 56/93 (60.22%), Query Frame = 0
BLAST of Carg10940 vs. TrEMBL
Match: tr|A0A1R3J803|A0A1R3J803_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_18759 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 7.6e-12 Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 0
BLAST of Carg10940 vs. TrEMBL
Match: tr|A0A068UNX2|A0A068UNX2_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00030830001 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 2.5e-10 Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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