Carg10124 (gene) Silver-seed gourd

Overview
NameCarg10124
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCarboxyl-terminal-processing protease
LocationCucurbita_argyrosperma_scaffold_039 : 537603 .. 539590 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAATTATGTCCTTTGCAGGTGCTGTGAAAGAAGCGATTGATTATTTAAGGAGTAACAAAGTTAATGCCTTTGTACTTGACCTTCGGGATAATAGGTGATTAGTTTTCACTTTTCAGCACTTAAAGTTTTCCTTTTAGCACACCTCTTGAACTGTGGAACTTGTTGCAGTGGTGGTCTTTTTCCAGAAGGAGTTGAGATTGCCAAGATTTGGTACGTGCTATTTGGGTATATTATTTGGTGTGTTATTCATGCTGTTAGTTTCATTAATGGTGTAATATGACACAATGGATAATCCAAGTATATTACATCTGTAAAATTATCACTTTGCATTTAGGGAAAGGAGGTCTCTTGTAGCAATAAAAAGGCTAGACAAGTTTGGAACTTGATGTCGTAAAGAGATCGTCTCAAATGGAAATCAAATTCTATGGGAGGTAGGAAAGTTGCACTTAGAGTTAAAACTGAATCAACCAACGCCTCTTTTTGAAGCGTGTGATCAAAGAAGCAAAGGAATAAGATTCAAAGGGAATAATCAATCCCAAATTTTCTCCAAAAATGAATGCGAGATCCATTTCCTGTTGAAAACTAAAGAACTTGCTTTGTTCAGCAATGGGAAATGGATTCCCATATGAGATCCCACATCGGTTAGAGAAGGGAACGAAACATTCTTTATAAGGGTGTAGAAACCTCTTCCTAGTAGACACATTTTAAATGTTCTTTTGAGGGGAAGCCTAGAAGGGAGTTACATCCCAGGGCTCTTAGATGTGCTTTTTAGAAACCACATGTTCTATCGGCTGACAAACATATTTATCATGATAACCTTGTGGGACAAAGAATCTGACTATTGAAGGGAAAGTTCCATTACCACTTGGCTAGGTCAGGTAGTTTCCTATATGTTTGATTCCTTGTTCCTGCCCTCGTTAAACCCCTAGTAGAATGGTCTGTCTTTTTAAGTTTGTTTGGATATAGTTTAATGAATCAGTAGACTAATATTATTAGGTGACATTGATGTTGTGCATGTGTGAGATCTATCATTTCCATCTTTTCTCTTTTCCATTGATCATTTCATTTGCGATTTGGTCGGATCTCAATAATTTATCATACTTTTAACATAGTACTTGACATACAAGGATTCAAAAGTTGACAGTGAATCATTGTAGCTAGTAGAATGTCCTCTTAACGCTCTGCAGCCTGGTTTCATATTATCTGTTCTTATTCAGGTTGGACAAAGGTGTTATCGTGTATATTTGCGACAGTCGTGGTGTCCGAGATATATATGATTCAGATGGAAGTAGCTCTATAGCAGCTTCAGAACCATTAGCTGTGTTGGTAAACTTTCAGCTCCATTCTTTCTCTAAATAAAGGCTCCACCAAGTATCTCATCTATTCTTACTATTTACTTCATCATCACGACCTCCTTTTCTATGGATTCCTCTAAAGACTGCTTTAATATTTCTGTTACAATCACGATTATCCTCTTATTCTGCATTCTTTAAACTTTATTTAAACTTTACGAAAAATGTAAGCCTTTTAAACTTTATTTTGATCGTTTGAACATAACGCTTATATTAGGTGAACAAGGGAACTGCTAGTGCGAGTGAAATACTAGCCGGGGCATTGAAGGACAACAAGCGTGCTATATTATTTGGAGAACCAACCTATGGGAAAGGGTAAGAACTTTTGGCTGCGCCCCAAAACATGATTAGATGTGGTATTATCCAATTTCCTTACAAGAATTCACATCCTTCTCTGCAGCAAGATTCAGTCAGTCTTTAAACTATCAGACGGTTCTGGCTTGGCTGTGACAGTGGCTCGTTACGAGACACCAGCTCACATCGACATCGACAAGGTCTCTCTATCTCTTATCCCTACGAACACTTCTCAGGAAGACAACGTTCTTAACACGCCTGGATATTCTGCAGGTAGGAGTGATTCCAGACCGTCCGCTACCAGCATCATTCCCAAAGGATGGAGATGGTTTCTGTAG

mRNA sequence

ATGAGAATTATGTCCTTTGCAGGTGCTGTGAAAGAAGCGATTGATTATTTAAGGAGTAACAAAGTTAATGCCTTTGTACTTGACCTTCGGGATAATAGTGGTGGTCTTTTTCCAGAAGGAGTTGAGATTGCCAAGATTTGGTTGGACAAAGGTGTTATCGTGTATATTTGCGACAGTCGTGGTGTCCGAGATATATATGATTCAGATGGAAGTAGCTCTATAGCAGCTTCAGAACCATTAGCTGTGTTGGTGAACAAGGGAACTGCTAGTGCGAGTGAAATACTAGCCGGGGCATTGAAGGACAACAAGCGTGCTATATTATTTGGAGAACCAACCTATGGGAAAGGAATTCACATCCTTCTCTGCAGCAAGATTCAGTCAGTCTTTAAACTATCAGACGGTTCTGGCTTGGCTGTGACAGTGGCTCGTTACGAGACACCAGCTCACATCGACATCGACAAGGTCTCTCTATCTCTTATCCCTACGAACACTTCTCAGGAAGACAACGTTCTTAACACGCCTGGATATTCTGCAGGTAGGAGTGATTCCAGACCGTCCGCTACCAGCATCATTCCCAAAGGATGGAGATGGTTTCTGTAG

Coding sequence (CDS)

ATGAGAATTATGTCCTTTGCAGGTGCTGTGAAAGAAGCGATTGATTATTTAAGGAGTAACAAAGTTAATGCCTTTGTACTTGACCTTCGGGATAATAGTGGTGGTCTTTTTCCAGAAGGAGTTGAGATTGCCAAGATTTGGTTGGACAAAGGTGTTATCGTGTATATTTGCGACAGTCGTGGTGTCCGAGATATATATGATTCAGATGGAAGTAGCTCTATAGCAGCTTCAGAACCATTAGCTGTGTTGGTGAACAAGGGAACTGCTAGTGCGAGTGAAATACTAGCCGGGGCATTGAAGGACAACAAGCGTGCTATATTATTTGGAGAACCAACCTATGGGAAAGGAATTCACATCCTTCTCTGCAGCAAGATTCAGTCAGTCTTTAAACTATCAGACGGTTCTGGCTTGGCTGTGACAGTGGCTCGTTACGAGACACCAGCTCACATCGACATCGACAAGGTCTCTCTATCTCTTATCCCTACGAACACTTCTCAGGAAGACAACGTTCTTAACACGCCTGGATATTCTGCAGGTAGGAGTGATTCCAGACCGTCCGCTACCAGCATCATTCCCAAAGGATGGAGATGGTTTCTGTAG

Protein sequence

MRIMSFAGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIYDSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQSVFKLSDGSGLAVTVARYETPAHIDIDKVSLSLIPTNTSQEDNVLNTPGYSAGRSDSRPSATSIIPKGWRWFL
Homology
[Close]
BLAST of Carg10124 vs. NCBI nr
Match: XP_022959504.1 (carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 141/151 (93.38%), Postives = 143/151 (94.70%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 66
           +GAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY
Sbjct: 355 SGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 414

Query: 67  DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQ 126
           DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKG       KIQ
Sbjct: 415 DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKG-------KIQ 474

Query: 127 SVFKLSDGSGLAVTVARYETPAHIDIDKVSL 158
           SVFKLSDGSGLAVTVARYETPAHIDIDKV +
Sbjct: 475 SVFKLSDGSGLAVTVARYETPAHIDIDKVGV 498

[Close]
BLAST of Carg10124 vs. NCBI nr
Match: XP_022959503.1 (carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 141/151 (93.38%), Postives = 143/151 (94.70%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 66
           +GAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY
Sbjct: 357 SGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 416

Query: 67  DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQ 126
           DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKG       KIQ
Sbjct: 417 DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKG-------KIQ 476

Query: 127 SVFKLSDGSGLAVTVARYETPAHIDIDKVSL 158
           SVFKLSDGSGLAVTVARYETPAHIDIDKV +
Sbjct: 477 SVFKLSDGSGLAVTVARYETPAHIDIDKVGV 500

[Close]
BLAST of Carg10124 vs. NCBI nr
Match: XP_023006378.1 (carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X1 [Cucurbita maxima] >XP_023006379.1 carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 141/151 (93.38%), Postives = 143/151 (94.70%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 66
           +GAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY
Sbjct: 357 SGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 416

Query: 67  DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQ 126
           DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKG       KIQ
Sbjct: 417 DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKG-------KIQ 476

Query: 127 SVFKLSDGSGLAVTVARYETPAHIDIDKVSL 158
           SVFKLSDGSGLAVTVARYETPAHIDIDKV +
Sbjct: 477 SVFKLSDGSGLAVTVARYETPAHIDIDKVGV 500

[Close]
BLAST of Carg10124 vs. NCBI nr
Match: XP_023006380.1 (carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 141/151 (93.38%), Postives = 143/151 (94.70%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 66
           +GAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY
Sbjct: 355 SGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 414

Query: 67  DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQ 126
           DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKG       KIQ
Sbjct: 415 DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKG-------KIQ 474

Query: 127 SVFKLSDGSGLAVTVARYETPAHIDIDKVSL 158
           SVFKLSDGSGLAVTVARYETPAHIDIDKV +
Sbjct: 475 SVFKLSDGSGLAVTVARYETPAHIDIDKVGV 498

[Close]
BLAST of Carg10124 vs. NCBI nr
Match: XP_023548679.1 (carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 141/151 (93.38%), Postives = 143/151 (94.70%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 66
           +GAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY
Sbjct: 357 SGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 416

Query: 67  DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQ 126
           DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKG       KIQ
Sbjct: 417 DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKG-------KIQ 476

Query: 127 SVFKLSDGSGLAVTVARYETPAHIDIDKVSL 158
           SVFKLSDGSGLAVTVARYETPAHIDIDKV +
Sbjct: 477 SVFKLSDGSGLAVTVARYETPAHIDIDKVGV 500

[Close]
BLAST of Carg10124 vs. TAIR10
Match: AT4G17740.1 (Peptidase S41 family protein)

HSP 1 Score: 244.2 bits (622), Expect = 6.8e-65
Identity = 123/152 (80.92%), Postives = 136/152 (89.47%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 66
           + AV+EAI+ LR N VNAFVLDLRDNSGG FPEG+EIAK WLDKGVIVYICDSRGVRDIY
Sbjct: 334 SSAVREAIETLRGNNVNAFVLDLRDNSGGSFPEGIEIAKFWLDKGVIVYICDSRGVRDIY 393

Query: 67  DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQ 126
           D+DGS++IA SEPLAVLVNKGTASASEILAGALKDNKRA+++GEPTYGKG       KIQ
Sbjct: 394 DTDGSNAIATSEPLAVLVNKGTASASEILAGALKDNKRALVYGEPTYGKG-------KIQ 453

Query: 127 SVFKLSDGSGLAVTVARYETPAHIDIDKVSLS 159
           SVF+LSDGSGLAVTVARYETPAH DIDKV ++
Sbjct: 454 SVFELSDGSGLAVTVARYETPAHTDIDKVGVT 478

[Close]
BLAST of Carg10124 vs. TAIR10
Match: AT3G57680.1 (Peptidase S41 family protein)

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-28
Identity = 68/153 (44.44%), Postives = 100/153 (65.36%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLD-KGVIVYICDSRGVRDI 66
           A  ++ A+  + +  V +++LDLR+N GGL   G+++A++WLD    +VY  D  GV   
Sbjct: 324 ASDMENAVHEMENQDVQSYILDLRNNPGGLVRAGLDVAQLWLDGDETLVYTIDREGVTSP 383

Query: 67  YDSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKI 126
            +     ++   +PL VLVN+G+ASASEILAGAL DN RAIL G  T+GKG       KI
Sbjct: 384 INMINGHAV-THDPLVVLVNEGSASASEILAGALHDNGRAILVGNRTFGKG-------KI 443

Query: 127 QSVFKLSDGSGLAVTVARYETPAHIDIDKVSLS 159
           QS+ +L+DGS L VTVA+Y +P+  +ID+V ++
Sbjct: 444 QSITELNDGSALFVTVAKYLSPSLHEIDQVGIA 468

[Close]
BLAST of Carg10124 vs. TAIR10
Match: AT5G46390.2 (Peptidase S41 family protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25
Identity = 68/143 (47.55%), Postives = 88/143 (61.54%), Query Frame = 0 

Query: 13  AIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRG--VRDIYDSDG 72
           A+  L     + FV+DLRDN GGL   G+E AK++LD+G  V     R    +    SD 
Sbjct: 326 AMKRLLDKGASYFVMDLRDNLGGLVQAGIETAKLFLDEGDTVIYTAGRDPEAQKTVVSDK 385

Query: 73  SSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQSVFK 132
              I A  PL V+VN  TASASEI+A AL DN +A+L GE TYGKG+       IQSV++
Sbjct: 386 KPLITA--PLIVMVNNRTASASEIVASALHDNCKAVLVGERTYGKGL-------IQSVYE 445

Query: 133 LSDGSGLAVTVARYETPAHIDID 154
           L DGSG+ VT+ +Y TP H+DI+
Sbjct: 446 LRDGSGVVVTIGKYVTPNHMDIN 459

[Close]
BLAST of Carg10124 vs. Swiss-Prot
Match: sp|O23614|CTPA2_ARATH (Carboxyl-terminal-processing peptidase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CTPA2 PE=1 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.2e-63
Identity = 123/152 (80.92%), Postives = 136/152 (89.47%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 66
           + AV+EAI+ LR N VNAFVLDLRDNSGG FPEG+EIAK WLDKGVIVYICDSRGVRDIY
Sbjct: 334 SSAVREAIETLRGNNVNAFVLDLRDNSGGSFPEGIEIAKFWLDKGVIVYICDSRGVRDIY 393

Query: 67  DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQ 126
           D+DGS++IA SEPLAVLVNKGTASASEILAGALKDNKRA+++GEPTYGKG       KIQ
Sbjct: 394 DTDGSNAIATSEPLAVLVNKGTASASEILAGALKDNKRALVYGEPTYGKG-------KIQ 453

Query: 127 SVFKLSDGSGLAVTVARYETPAHIDIDKVSLS 159
           SVF+LSDGSGLAVTVARYETPAH DIDKV ++
Sbjct: 454 SVFELSDGSGLAVTVARYETPAHTDIDKVGVT 478

[Close]
BLAST of Carg10124 vs. Swiss-Prot
Match: sp|O04073|CTPA_TETOB (C-terminal processing peptidase, chloroplastic OS=Tetradesmus obliquus OX=3088 GN=ctpA PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.1e-39
Identity = 83/150 (55.33%), Postives = 113/150 (75.33%), Query Frame = 0 

Query: 9   AVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIYDS 68
           A ++A   L    V   VLD+R+N GGLFP GV +A++ +D+G +V I DS+G+RDIY +
Sbjct: 292 AAQQAFTELSKQGVAGLVLDIRNNGGGLFPAGVNVARMLVDRGDLVLIADSQGIRDIYSA 351

Query: 69  DGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQSV 128
           DG +SI ++ PL VLVN+GTASASE+LAGALKD+KR ++ GE T+GKG+       IQ+V
Sbjct: 352 DG-NSIDSATPLVVLVNRGTASASEVLAGALKDSKRGLIAGERTFGKGL-------IQTV 411

Query: 129 FKLSDGSGLAVTVARYETPAHIDIDKVSLS 159
             LSDGSG+AVTVARY+TPA +DI+K+ +S
Sbjct: 412 VDLSDGSGVAVTVARYQTPAGVDINKIGVS 433

[Close]
BLAST of Carg10124 vs. Swiss-Prot
Match: sp|Q55669|CTPA_SYNY3 (Carboxyl-terminal-processing protease OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=ctpA PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.0e-34
Identity = 79/161 (49.07%), Postives = 111/161 (68.94%), Query Frame = 0 

Query: 1   MRIMSF-AGAVKE---AIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYI 60
           +R+  F A A KE   A+  L     + ++LDLR+N GGL   G++IA++WL +  IVY 
Sbjct: 222 IRLSQFSANAYKEVAHALHQLEEQGADGYILDLRNNPGGLLQAGIDIARLWLPESTIVYT 281

Query: 61  CDSRGVRDIYDSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKG 120
            + +G ++ + ++G +  A   PL VLVN+GTASASEILAGAL+DN+RA L GE T+GKG
Sbjct: 282 VNRQGTQESFTANGEA--ATDRPLVVLVNQGTASASEILAGALQDNQRATLVGEKTFGKG 341

Query: 121 IHILLCSKIQSVFKLSDGSGLAVTVARYETPAHIDIDKVSL 158
           +       IQS+F+LSDG+G+AVTVA+YETP H DI K+ +
Sbjct: 342 L-------IQSLFELSDGAGIAVTVAKYETPQHHDIHKLGI 373

[Close]
BLAST of Carg10124 vs. Swiss-Prot
Match: sp|P42784|CTPA_SYNP2 (Carboxyl-terminal-processing protease OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=ctpA PE=3 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 3.8e-33
Identity = 77/161 (47.83%), Postives = 110/161 (68.32%), Query Frame = 0 

Query: 1   MRIMSFAGAVK----EAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYI 60
           +R+  F+   K    ++++ L+    + +VLDLR+N GGL   G+EIA++WLD+  IVY 
Sbjct: 219 IRLNQFSANAKTEIIKSLNQLQKQGADRYVLDLRNNPGGLLQAGIEIARLWLDQETIVYT 278

Query: 61  CDSRGVRDIYDSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKG 120
            + +G+ + Y + G     A  PL VLVN+ TASASEILAGAL+DN RA+L GE T+GKG
Sbjct: 279 VNRQGIFESYSAVGQPLTDA--PLVVLVNQATASASEILAGALQDNGRAMLVGEKTFGKG 338

Query: 121 IHILLCSKIQSVFKLSDGSGLAVTVARYETPAHIDIDKVSL 158
           +       IQS+F+L DG+G+AVTVA+YETP H DI+K+ +
Sbjct: 339 L-------IQSLFELPDGAGMAVTVAKYETPLHHDINKLGI 370

[Close]
BLAST of Carg10124 vs. Swiss-Prot
Match: sp|F4J3G5|CTPA3_ARATH (Carboxyl-terminal-processing peptidase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CTPA3 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.4e-27
Identity = 68/153 (44.44%), Postives = 100/153 (65.36%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLD-KGVIVYICDSRGVRDI 66
           A  ++ A+  + +  V +++LDLR+N GGL   G+++A++WLD    +VY  D  GV   
Sbjct: 324 ASDMENAVHEMENQDVQSYILDLRNNPGGLVRAGLDVAQLWLDGDETLVYTIDREGVTSP 383

Query: 67  YDSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKI 126
            +     ++   +PL VLVN+G+ASASEILAGAL DN RAIL G  T+GKG       KI
Sbjct: 384 INMINGHAV-THDPLVVLVNEGSASASEILAGALHDNGRAILVGNRTFGKG-------KI 443

Query: 127 QSVFKLSDGSGLAVTVARYETPAHIDIDKVSLS 159
           QS+ +L+DGS L VTVA+Y +P+  +ID+V ++
Sbjct: 444 QSITELNDGSALFVTVAKYLSPSLHEIDQVGIA 468

[Close]
BLAST of Carg10124 vs. TrEMBL
Match: tr|A0A0A0LIE8|A0A0A0LIE8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G165670 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 5.2e-67
Identity = 136/151 (90.07%), Postives = 141/151 (93.38%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 66
           +GAVKEAID LRSN VNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY
Sbjct: 359 SGAVKEAIDSLRSNSVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 418

Query: 67  DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQ 126
           DSDGS++IAASEPLAVLVNKGTASASEILAGALKDNKRA+LFGEPTYGKG       KIQ
Sbjct: 419 DSDGSNTIAASEPLAVLVNKGTASASEILAGALKDNKRAMLFGEPTYGKG-------KIQ 478

Query: 127 SVFKLSDGSGLAVTVARYETPAHIDIDKVSL 158
           SVFKLSDGSGLAVTVARYETPAHIDIDKV +
Sbjct: 479 SVFKLSDGSGLAVTVARYETPAHIDIDKVGV 502

[Close]
BLAST of Carg10124 vs. TrEMBL
Match: tr|A0A1S3CDJ4|A0A1S3CDJ4_CUCME (carboxyl-terminal-processing peptidase 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499481 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 8.8e-67
Identity = 136/151 (90.07%), Postives = 140/151 (92.72%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 66
           +GAVKEAID LRSN VNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY
Sbjct: 357 SGAVKEAIDSLRSNSVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 416

Query: 67  DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQ 126
           DSDGS++IAASEPLAVLVNKGTASASEILAGALKDNKRA LFGEPTYGKG       KIQ
Sbjct: 417 DSDGSNTIAASEPLAVLVNKGTASASEILAGALKDNKRATLFGEPTYGKG-------KIQ 476

Query: 127 SVFKLSDGSGLAVTVARYETPAHIDIDKVSL 158
           SVFKLSDGSGLAVTVARYETPAHIDIDKV +
Sbjct: 477 SVFKLSDGSGLAVTVARYETPAHIDIDKVGV 500

[Close]
BLAST of Carg10124 vs. TrEMBL
Match: tr|A0A2I4G2E1|A0A2I4G2E1_9ROSI (carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X2 OS=Juglans regia OX=51240 GN=LOC109004104 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 4.4e-66
Identity = 133/151 (88.08%), Postives = 140/151 (92.72%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 66
           +GAVKEAID LRSN VNAFVLDLRDNSGGLFPEG+EIAKIWLDKGVIVYICDSRGVRDIY
Sbjct: 362 SGAVKEAIDSLRSNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYICDSRGVRDIY 421

Query: 67  DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQ 126
           D+DGSS+IAASEPLAVLVNKGTASASEILAGALKDNKRA+LFGEPTYGKG       KIQ
Sbjct: 422 DTDGSSAIAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG-------KIQ 481

Query: 127 SVFKLSDGSGLAVTVARYETPAHIDIDKVSL 158
           SVF+LSDGSGLAVTVARYETPAH DIDKV +
Sbjct: 482 SVFQLSDGSGLAVTVARYETPAHTDIDKVGV 505

[Close]
BLAST of Carg10124 vs. TrEMBL
Match: tr|A0A2I4G2F6|A0A2I4G2F6_9ROSI (carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109004104 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 4.4e-66
Identity = 133/151 (88.08%), Postives = 140/151 (92.72%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 66
           +GAVKEAID LRSN VNAFVLDLRDNSGGLFPEG+EIAKIWLDKGVIVYICDSRGVRDIY
Sbjct: 367 SGAVKEAIDSLRSNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYICDSRGVRDIY 426

Query: 67  DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQ 126
           D+DGSS+IAASEPLAVLVNKGTASASEILAGALKDNKRA+LFGEPTYGKG       KIQ
Sbjct: 427 DTDGSSAIAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG-------KIQ 486

Query: 127 SVFKLSDGSGLAVTVARYETPAHIDIDKVSL 158
           SVF+LSDGSGLAVTVARYETPAH DIDKV +
Sbjct: 487 SVFQLSDGSGLAVTVARYETPAHTDIDKVGV 510

[Close]
BLAST of Carg10124 vs. TrEMBL
Match: tr|A0A2P4L1V3|A0A2P4L1V3_QUESU (Isoform 2 of carboxyl-terminal-processing peptidase 2, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_42606 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 9.7e-66
Identity = 132/151 (87.42%), Postives = 140/151 (92.72%), Query Frame = 0 

Query: 7   AGAVKEAIDYLRSNKVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYICDSRGVRDIY 66
           +GAVKEAID LRSN VNAFVLDLRDNSGGLFPEG+EIAKIWLDKGVIVYICDSRGVRDIY
Sbjct: 125 SGAVKEAIDTLRSNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYICDSRGVRDIY 184

Query: 67  DSDGSSSIAASEPLAVLVNKGTASASEILAGALKDNKRAILFGEPTYGKGIHILLCSKIQ 126
           D+DGS++IAASEPLAVLVNKGTASASEILAGALKDNKRA+LFGEPTYGKG       KIQ
Sbjct: 185 DTDGSNAIAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG-------KIQ 244

Query: 127 SVFKLSDGSGLAVTVARYETPAHIDIDKVSL 158
           SVF+LSDGSGLAVTVARYETPAH DIDKV +
Sbjct: 245 SVFELSDGSGLAVTVARYETPAHTDIDKVGV 268

The following BLAST results are available for this feature:
BLAST of Carg10124 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022959504.11.7e-6993.38carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X2 [Cucurbi... [more]
XP_022959503.11.7e-6993.38carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X1 [Cucurbi... [more]
XP_023006378.11.7e-6993.38carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X1 [Cucurbi... [more]
XP_023006380.11.7e-6993.38carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X2 [Cucurbi... [more]
XP_023548679.11.7e-6993.38carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X1 [Cucurbi... [more]
BLAST of Carg10124 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17740.16.8e-6580.92Peptidase S41 family protein[more]
AT3G57680.13.0e-2844.44Peptidase S41 family protein[more]
AT5G46390.21.8e-2547.55Peptidase S41 family protein[more]
BLAST of Carg10124 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O23614|CTPA2_ARATH1.2e-6380.92Carboxyl-terminal-processing peptidase 2, chloroplastic OS=Arabidopsis thaliana ... [more]
sp|O04073|CTPA_TETOB6.1e-3955.33C-terminal processing peptidase, chloroplastic OS=Tetradesmus obliquus OX=3088 G... [more]
sp|Q55669|CTPA_SYNY32.0e-3449.07Carboxyl-terminal-processing protease OS=Synechocystis sp. (strain PCC 6803 / Ka... [more]
sp|P42784|CTPA_SYNP23.8e-3347.83Carboxyl-terminal-processing protease OS=Synechococcus sp. (strain ATCC 27264 / ... [more]
sp|F4J3G5|CTPA3_ARATH5.4e-2744.44Carboxyl-terminal-processing peptidase 3, chloroplastic OS=Arabidopsis thaliana ... [more]
BLAST of Carg10124 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LIE8|A0A0A0LIE8_CUCSA5.2e-6790.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G165670 PE=4 SV=1[more]
tr|A0A1S3CDJ4|A0A1S3CDJ4_CUCME8.8e-6790.07carboxyl-terminal-processing peptidase 2, chloroplastic OS=Cucumis melo OX=3656 ... [more]
tr|A0A2I4G2E1|A0A2I4G2E1_9ROSI4.4e-6688.08carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X2 OS=Jugla... [more]
tr|A0A2I4G2F6|A0A2I4G2F6_9ROSI4.4e-6688.08carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X1 OS=Jugla... [more]
tr|A0A2P4L1V3|A0A2P4L1V3_QUESU9.7e-6687.42Isoform 2 of carboxyl-terminal-processing peptidase 2, chloroplastic OS=Quercus ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008236serine-type peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR029045ClpP/crotonase-like_dom_sf
IPR004447Peptidase_S41A
IPR005151Tail-specific_protease
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008236 serine-type peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10124-RACarg10124-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005151Tail specific proteaseSMARTSM00245tsp_4coord: 2..163
e-value: 1.4E-36
score: 137.5
IPR005151Tail specific proteasePFAMPF03572Peptidase_S41coord: 2..154
e-value: 1.5E-36
score: 125.3
NoneNo IPR availableGENE3DG3DSA:3.90.226.10coord: 2..173
e-value: 1.1E-45
score: 157.0
NoneNo IPR availablePANTHERPTHR32060:SF7CARBOXYL-TERMINAL-PROCESSING PEPTIDASE 2, CHLOROPLASTICcoord: 7..157
NoneNo IPR availablePANTHERPTHR32060FAMILY NOT NAMEDcoord: 7..157
IPR004447C-terminal-processing peptidase S41ACDDcd07560Peptidase_S41_CPPcoord: 2..155
e-value: 1.34587E-61
score: 192.242
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILYSSF52096ClpP/crotonasecoord: 6..155

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg10124Cla007643Watermelon (97103) v1carwmB0219
Carg10124Csa2G165670Cucumber (Chinese Long) v2carcuB0254
Carg10124MELO3C023073Melon (DHL92) v3.5.1carmeB0233
Carg10124ClCG06G007500Watermelon (Charleston Gray)carwcgB0221
Carg10124CSPI02G09730Wild cucumber (PI 183967)carcpiB0259
Carg10124Cucsa.383050Cucumber (Gy14) v1carcgyB0273
Carg10124CmaCh08G010420Cucurbita maxima (Rimu)carcmaB0321
Carg10124CmaCh17G001210Cucurbita maxima (Rimu)carcmaB0314
Carg10124CmoCh08G010140Cucurbita moschata (Rifu)carcmoB0326
Carg10124CmoCh17G001240Cucurbita moschata (Rifu)carcmoB0320
Carg10124Lsi09G011710Bottle gourd (USVL1VR-Ls)carlsiB204
Carg10124Cp4.1LG12g01000Cucurbita pepo (Zucchini)carcpeB0322
Carg10124Cp4.1LG17g03170Cucurbita pepo (Zucchini)carcpeB0323
Carg10124CsGy2G009890Cucumber (Gy14) v2carcgybB0243
Carg10124MELO3C023073.2Melon (DHL92) v3.6.1carmedB0240
Carg10124CsaV3_2G012180Cucumber (Chinese Long) v3carcucB0258
Carg10124Cla97C06G117220Watermelon (97103) v2carwmbB0230
Carg10124Bhi12G001365Wax gourdcarwgoB0281
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg10124Carg11007Silver-seed gourdcarcarB267
The following block(s) are covering this gene:
GeneOrganismBlock
Carg10124Silver-seed gourdcarcarB259
Carg10124Silver-seed gourdcarcarB264
Carg10124Silver-seed gourdcarcarB266
Carg10124Cucumber (Gy14) v2carcgybB0245
Carg10124Cucumber (Gy14) v1carcgyB0269
Carg10124Cucurbita maxima (Rimu)carcmaB0313
Carg10124Cucurbita maxima (Rimu)carcmaB0315
Carg10124Cucurbita maxima (Rimu)carcmaB0316
Carg10124Cucurbita moschata (Rifu)carcmoB0319
Carg10124Cucurbita moschata (Rifu)carcmoB0321
Carg10124Cucurbita moschata (Rifu)carcmoB0322
Carg10124Cucurbita pepo (Zucchini)carcpeB0328
Carg10124Cucurbita pepo (Zucchini)carcpeB0329
Carg10124Wild cucumber (PI 183967)carcpiB0261
Carg10124Cucumber (Chinese Long) v2carcuB0256
Carg10124Cucumber (Chinese Long) v3carcucB0260
Carg10124Bottle gourd (USVL1VR-Ls)carlsiB206
Carg10124Melon (DHL92) v3.5.1carmeB0236
Carg10124Melon (DHL92) v3.6.1carmedB0243
Carg10124Watermelon (Charleston Gray)carwcgB0220
Carg10124Watermelon (97103) v1carwmB0218
Carg10124Watermelon (97103) v2carwmbB0229
Carg10124Wax gourdcarwgoB0282
Carg10124Cucurbita pepo (Zucchini)carcpeB0327