Carg10099 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGTTCACTCACGCACCATCACCACCATGTTGCCTCCTAGGGCGTCAAGGAAGCGAAAGGAGGTTGAGCCGTTTGTGAAGCCAAAAGCTACGGGAGTCGACTCAGTCTCGTCGAATCAGCTTCTAGCCGGCTACCTTGCTCACGAATTTCTCAGCAAAGGCACTTTGTTTGGGGAGAAGTATGAGCCGGCTCGAAGTGAAGCCGTTAGAATGACTAGCTCACAGCCATCTGAGTGTAAGAGGATGAAGCCGGAAGCCGCCACCGCCGCCGCCGCCGCTCCGAGCGTCAGAAAAGAAAATCAAAGCTATGCTGAGGTGGCAAGCATCTTGAAAATGGATGGGGCCCACTTGCCTGGGATTGTTAACCCGGCCCAGCTCGCTCGGTGGATTAAAATGTAACGTCCGGCGTGGTGTCCTTTCATTGGATGTAAATTTTACCTTTTAAGTTTGCGTTGAAATTTCTCATTTCTCATAACAGTTGGAAGGATGGAAGTAGAGACGAGTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAAATAGCTCTCGGGAACTTTCTCTCTCATTCTCTTTTGTTCTCTCGAATTTCATGAGTGTAGCGAGATCTGTTGCTGATCAACGTATAGGACTGAGTTCGGAAACGGAGAATCAGTCAGTTTGTTCTAATGCTGTAATCGCACAGTTTCTCCTTCCATGTAAATGATTATATGTTACTCTTTTTCTTCTGTTTCAGATTTTTTATTGCTCCGATTTCTGAAATACAGGTCTATAATGGATGCATGCATAAGGTTTCATAAGCTGCAAATGTTGAACCGACATTTGCTTTAGAAATTGGAGCCATGGTGATTGAGGTACGTACGCTATTGAAATTTTCTGCACTTTACGAATTTCTTTAGTTATATGTGGATCGATGAATGATTCTTCTCGTTTGCGTCGTAAATGATTGGTTCGATTGTTCCTCTTTTGTTTAGTTGGCACGGCAGCCTTGACCGTCAAAATTCGTTCATCTGTCATGCCAATTTAGAATTTGTTACGGCCTTAGATTTTCACTGCAAAAATTTTCCGTTTCGTCGATATATTGCTTTATTTTCTTCAGAAGAAAATTGCAATTAATTTTGGAAACATTCTTCGAGGAAGAATGTCGGATGATCGGATAATCAAGTTCTTTGTGAAAGAACTTGTTATGGCTTATGGCTTTGGATATCCGTGCGTATTGTCTCTGTTTCTGCCGCCAGCTTCACTTGGAAGGAAATCGCCGTTAATTTTAGTAACATTCCATCTGCAAGAAACGCTCTATGGTTCGATTCCATTACCACGGCGCAACAAGAAGTATCACGGTAGTTTTCAATCTTCAAAAGTTTTGTTTGCTTCAAAATTTTTAGCTTTCACAATTATATATTCAGTACACAAGCGTAATTTTCTGAAAAATAAAATAGGTTTTTTTTCTTTT ATGAGTGTTCACTCACGCACCATCACCACCATGTTGCCTCCTAGGGCGTCAAGGAAGCGAAAGGAGGTTGAGCCGTTTGTGAAGCCAAAAGCTACGGGAGTCGACTCAGTCTCGTCGAATCAGCTTCTAGCCGGCTACCTTGCTCACGAATTTCTCAGCAAAGGCACTTTGTTTGGGGAGAAGTATGAGCCGGCTCGAAGTGAAGCCGTTAGAATGACTAGCTCACAGCCATCTGAGTGTAAGAGGATGAAGCCGGAAGCCGCCACCGCCGCCGCCGCCGCTCCGAGCGTCAGAAAAGAAAATCAAAGCTATGCTGAGGTGGCAAGCATCTTGAAAATGGATGGGGCCCACTTGCCTGGGATTGTTAACCCGGCCCAGCTCGCTCGGTGGATTAAAATAATGTCGGATGATCGGATAATCAAGTTCTTTGTGAAAGAACTTGTTATGGCTTATGGCTTTGGATATCCGTGCGTATTGTCTCTGTTTCTGCCGCCAGCTTCACTTGGAAGGAAATCGCCGTTAATTTTAGTAACATTCCATCTGCAAGAAACGCTCTATGGTTCGATTCCATTACCACGGCGCAACAAGAAGTATCACGGTAGTTTTCAATCTTCAAAAGTTTTGTTTGCTTCAAAATTTTTAGCTTTCACAATTATATATTCAGTACACAAGCGTAATTTTCTGAAAAATAAAATAGGTTTTTTTTCTTTT ATGAGTGTTCACTCACGCACCATCACCACCATGTTGCCTCCTAGGGCGTCAAGGAAGCGAAAGGAGGTTGAGCCGTTTGTGAAGCCAAAAGCTACGGGAGTCGACTCAGTCTCGTCGAATCAGCTTCTAGCCGGCTACCTTGCTCACGAATTTCTCAGCAAAGGCACTTTGTTTGGGGAGAAGTATGAGCCGGCTCGAAGTGAAGCCGTTAGAATGACTAGCTCACAGCCATCTGAGTGTAAGAGGATGAAGCCGGAAGCCGCCACCGCCGCCGCCGCCGCTCCGAGCGTCAGAAAAGAAAATCAAAGCTATGCTGAGGTGGCAAGCATCTTGAAAATGGATGGGGCCCACTTGCCTGGGATTGTTAACCCGGCCCAGCTCGCTCGGTGGATTAAAATAATGTCGGATGATCGGATAATCAAGTTCTTTGTGAAAGAACTTGTTATGGCTTATGGCTTTGGATATCCGTGCGTATTGTCTCTGTTTCTGCCGCCAGCTTCACTTGGAAGGAAATCGCCGTTAATTTTAGTAACATTCCATCTGCAAGAAACGCTCTATGGTTCGATTCCATTACCACGGCGCAACAAGAAGTATCACGGTAGTTTTCAATCTTCAAAAGTTTTGTTTGCTTCAAAATTTTTAGCTTTCACAATTATATATTCAGTACACAAGCGTAATTTTCTGAAAAATAAAATAGGTTTTTTTTCTTTT MSVHSRTITTMLPPRASRKRKEVEPFVKPKATGVDSVSSNQLLAGYLAHEFLSKGTLFGEKYEPARSEAVRMTSSQPSECKRMKPEAATAAAAAPSVRKENQSYAEVASILKMDGAHLPGIVNPAQLARWIKIMSDDRIIKFFVKELVMAYGFGYPCVLSLFLPPASLGRKSPLILVTFHLQETLYGSIPLPRRNKKYHGSFQSSKVLFASKFLAFTIIYSVHKRNFLKNKIGFFSF
BLAST of Carg10099 vs. NCBI nr
Match: XP_023547636.1 (uncharacterized protein LOC111806520 [Cucurbita pepo subsp. pepo] >XP_023547637.1 uncharacterized protein LOC111806520 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 240.0 bits (611), Expect = 8.4e-60 Identity = 127/133 (95.49%), Postives = 128/133 (96.24%), Query Frame = 0
BLAST of Carg10099 vs. NCBI nr
Match: XP_023006321.1 (uncharacterized protein LOC111499092 [Cucurbita maxima]) HSP 1 Score: 233.0 bits (593), Expect = 1.0e-57 Identity = 123/133 (92.48%), Postives = 124/133 (93.23%), Query Frame = 0
BLAST of Carg10099 vs. NCBI nr
Match: XP_022959091.1 (uncharacterized protein LOC111460190 [Cucurbita moschata]) HSP 1 Score: 229.2 bits (583), Expect = 1.5e-56 Identity = 122/135 (90.37%), Postives = 124/135 (91.85%), Query Frame = 0
BLAST of Carg10099 vs. NCBI nr
Match: XP_022964143.1 (uncharacterized protein LOC111464257 [Cucurbita moschata]) HSP 1 Score: 208.4 bits (529), Expect = 2.7e-50 Identity = 111/132 (84.09%), Postives = 117/132 (88.64%), Query Frame = 0
BLAST of Carg10099 vs. NCBI nr
Match: XP_023524524.1 (uncharacterized protein LOC111788416 [Cucurbita pepo subsp. pepo] >XP_023514270.1 uncharacterized protein LOC111778588 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 205.3 bits (521), Expect = 2.3e-49 Identity = 110/132 (83.33%), Postives = 116/132 (87.88%), Query Frame = 0
BLAST of Carg10099 vs. TAIR10
Match: AT5G44060.1 (unknown protein) HSP 1 Score: 90.5 bits (223), Expect = 1.5e-18 Identity = 51/99 (51.52%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of Carg10099 vs. TAIR10
Match: AT3G23440.1 (embryo sac development arrest 6) HSP 1 Score: 85.9 bits (211), Expect = 3.7e-17 Identity = 49/118 (41.53%), Postives = 68/118 (57.63%), Query Frame = 0
BLAST of Carg10099 vs. TAIR10
Match: AT1G04000.1 (unknown protein) HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16 Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = 0
BLAST of Carg10099 vs. TrEMBL
Match: tr|A0A0A0LI65|A0A0A0LI65_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173040 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 7.3e-36 Identity = 87/124 (70.16%), Postives = 96/124 (77.42%), Query Frame = 0
BLAST of Carg10099 vs. TrEMBL
Match: tr|A0A2I4DL98|A0A2I4DL98_9ROSI (uncharacterized protein LOC108981274 OS=Juglans regia OX=51240 GN=LOC108981274 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.5e-28 Identity = 79/132 (59.85%), Postives = 98/132 (74.24%), Query Frame = 0
BLAST of Carg10099 vs. TrEMBL
Match: tr|A0A067L783|A0A067L783_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02363 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 8.1e-27 Identity = 79/147 (53.74%), Postives = 96/147 (65.31%), Query Frame = 0
BLAST of Carg10099 vs. TrEMBL
Match: tr|A0A2I4END0|A0A2I4END0_9ROSI (uncharacterized protein LOC108991187 OS=Juglans regia OX=51240 GN=LOC108991187 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 5.3e-26 Identity = 79/146 (54.11%), Postives = 97/146 (66.44%), Query Frame = 0
BLAST of Carg10099 vs. TrEMBL
Match: tr|A0A2P5FAJ2|A0A2P5FAJ2_9ROSA (Embryo sac development arrest protein OS=Trema orientalis OX=63057 GN=TorRG33x02_093200 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.7e-24 Identity = 64/105 (60.95%), Postives = 82/105 (78.10%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|