Carg06235 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTCCATTGCCACAGCCGTGGGCTGTTATCAGCTGGGCCGTCAAGAAAGCGGAAGGAGCCGTCGGCTCTTAAAGCCGGTGAGCAGCCAATTACGTCGAACCGGCTTCTGGCCGGGTACATGGCTTATGAGTTTCTGACCAAAGGAACCATCTTGGGCAGGAAGTTCGACCCGGATCGAGCCGAAGCAAGCCCATTCCCGAACGCCGTTGCTCAGTACAAGAAGCCGAAGACGGAAGCCGCGCCGCCGGAGATCATAAAAAAAGAGCATCAGATTCAGAGCTACGCCGACGTGGCAACCATTTTGAAGACGGATAAGGCCCAGATATCCGGCATCGTCAACCCGACCCAACTGGCTCGGTGGCTTACCAAATAA ATGAGTTTCCATTGCCACAGCCGTGGGCTGTTATCAGCTGGGCCGTCAAGAAAGCGGAAGGAGCCGTCGGCTCTTAAAGCCGGTGAGCAGCCAATTACGTCGAACCGGCTTCTGGCCGGGTACATGGCTTATGAGTTTCTGACCAAAGGAACCATCTTGGGCAGGAAGTTCGACCCGGATCGAGCCGAAGCAAGCCCATTCCCGAACGCCGTTGCTCAGTACAAGAAGCCGAAGACGGAAGCCGCGCCGCCGGAGATCATAAAAAAAGAGCATCAGATTCAGAGCTACGCCGACGTGGCAACCATTTTGAAGACGGATAAGGCCCAGATATCCGGCATCGTCAACCCGACCCAACTGGCTCGGTGGCTTACCAAATAA ATGAGTTTCCATTGCCACAGCCGTGGGCTGTTATCAGCTGGGCCGTCAAGAAAGCGGAAGGAGCCGTCGGCTCTTAAAGCCGGTGAGCAGCCAATTACGTCGAACCGGCTTCTGGCCGGGTACATGGCTTATGAGTTTCTGACCAAAGGAACCATCTTGGGCAGGAAGTTCGACCCGGATCGAGCCGAAGCAAGCCCATTCCCGAACGCCGTTGCTCAGTACAAGAAGCCGAAGACGGAAGCCGCGCCGCCGGAGATCATAAAAAAAGAGCATCAGATTCAGAGCTACGCCGACGTGGCAACCATTTTGAAGACGGATAAGGCCCAGATATCCGGCATCGTCAACCCGACCCAACTGGCTCGGTGGCTTACCAAATAA MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVATILKTDKAQISGIVNPTQLARWLTK
BLAST of Carg06235 vs. NCBI nr
Match: XP_023539410.1 (uncharacterized protein LOC111800062 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 238.4 bits (607), Expect = 1.3e-59 Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of Carg06235 vs. NCBI nr
Match: XP_022924296.1 (uncharacterized protein LOC111431827 [Cucurbita moschata]) HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44 Identity = 96/125 (76.80%), Postives = 106/125 (84.80%), Query Frame = 0
BLAST of Carg06235 vs. NCBI nr
Match: XP_023526927.1 (uncharacterized protein LOC111790299 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184.5 bits (467), Expect = 2.2e-43 Identity = 95/125 (76.00%), Postives = 105/125 (84.00%), Query Frame = 0
BLAST of Carg06235 vs. NCBI nr
Match: XP_011650922.1 (PREDICTED: uncharacterized protein LOC105434827 [Cucumis sativus] >KGN56835.1 hypothetical protein Csa_3G134830 [Cucumis sativus]) HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43 Identity = 97/130 (74.62%), Postives = 108/130 (83.08%), Query Frame = 0
BLAST of Carg06235 vs. NCBI nr
Match: XP_022979583.1 (uncharacterized protein LOC111479265 [Cucurbita maxima]) HSP 1 Score: 183.3 bits (464), Expect = 4.9e-43 Identity = 94/125 (75.20%), Postives = 105/125 (84.00%), Query Frame = 0
BLAST of Carg06235 vs. TAIR10
Match: AT5G44060.1 (unknown protein) HSP 1 Score: 79.0 bits (193), Expect = 2.4e-15 Identity = 42/105 (40.00%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of Carg06235 vs. TAIR10
Match: AT3G23440.1 (embryo sac development arrest 6) HSP 1 Score: 75.1 bits (183), Expect = 3.4e-14 Identity = 45/110 (40.91%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of Carg06235 vs. TAIR10
Match: AT1G04000.1 (unknown protein) HSP 1 Score: 67.8 bits (164), Expect = 5.5e-12 Identity = 41/98 (41.84%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of Carg06235 vs. TrEMBL
Match: tr|A0A0A0L4C1|A0A0A0L4C1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134830 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.9e-43 Identity = 97/130 (74.62%), Postives = 108/130 (83.08%), Query Frame = 0
BLAST of Carg06235 vs. TrEMBL
Match: tr|A0A1S3AWH5|A0A1S3AWH5_CUCME (uncharacterized protein LOC103483571 OS=Cucumis melo OX=3656 GN=LOC103483571 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 9.5e-43 Identity = 97/131 (74.05%), Postives = 106/131 (80.92%), Query Frame = 0
BLAST of Carg06235 vs. TrEMBL
Match: tr|A0A2I4DL98|A0A2I4DL98_9ROSI (uncharacterized protein LOC108981274 OS=Juglans regia OX=51240 GN=LOC108981274 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 3.1e-25 Identity = 77/139 (55.40%), Postives = 93/139 (66.91%), Query Frame = 0
BLAST of Carg06235 vs. TrEMBL
Match: tr|W9QPT9|W9QPT9_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008680 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24 Identity = 75/149 (50.34%), Postives = 93/149 (62.42%), Query Frame = 0
BLAST of Carg06235 vs. TrEMBL
Match: tr|A0A2N9FR37|A0A2N9FR37_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17584 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.9e-23 Identity = 64/119 (53.78%), Postives = 83/119 (69.75%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |