Carg09998 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09998
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	APO protein 2, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_030 : 902542 .. 905763 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAATTCGTTCTCATTCTTCTGTTTACTGTCACTGGATAACTATCCTTAACTGAAATCGAAGCTTCCTCATTCTATTTCACAACAATTCCCAGCAAATACATCGATTTTCCTGTAAGTTCGTAGTTTTCTTCTTCTTCTTCCGTTGTCTTTCCATTCCCATTTCCTCTTACCCTTTTTTCCATTGCTTGTTCTTGCTGGAGTTTGAATTCTTTGTACTGGGTTTCAGTATGCGCTTCTTTTTTAGAGGTTTACTACGAATTTACTTTATAATGATTTCCAGCTGAAGCGGACGACTGGGGTATTATGAACTTTTTATTTCCTGCCCTTGCCCACCATGTGTTTGATAATATTACCTTTTGTGGGTTTTTAATTATAACTATAGGTTCTTCGATTAGTTGCATATAATTTGCATAATTCAATATGTTTTGTTGCTTCGAGGATCTTATTGATGTTGGTTTAGGGTATGCTTTAAGATTTGTGCTACTTTGGGACTTCCTTTGTGTTTGAATGATTAATAGCTTAATCCAATCTGGAATAGCTCTTGAATTTGCTCAATAAGATCCTCCAGAAGGCCCATTAATCCTGCATTGCGTGCCTTTTAGTTGCATCGTCTTTCAGCTTCCCCTATTCTACCATTCAATTCTTCTTTTTAATCATTTTACATGTTTGTACATCTCATAGTTTGTAAGCAAGTTTTTCTGGTTTCAGGATGGATTGTAGTTCTTGTAACTACTCTTTTAGTACTATTTCATCTTGTTCTGTTAAATGGATTGAATTTCCTTCAAAATTGGAGTCCCGGAGAATTTTCTTTCAGAAGAAGTCTGAATTTGTGAAGCCCTGTGTAGGCCCAGGTCTTAGTTTGCTGGATTCTTTGCAGGTATGAATAATATCTTATGTTTTCAATCTTTGCTCTAAGCTTCTGTGCCTTACCTTATTTTGAATTTTCTATTTTCTATTGTGATTTTCAGCATATTAGTAACTTTGACTTCAAAGCCGGATCCAAATCTATGATTTCATCCTGGAAAATTCCTTGTTCATATTCATTTGCTGTAAGATGTGATCATCCCCAAAATGCTGATTTTCCTCGGTACTATTCCAAGAAGGAGAAGAAGCCATTTCCAGTTCCCATTGTGGAGTTGAGAAGAGCTGCCAGGGAGAGGATGAAAAAGAGTCAAGGCCAGCCGAGAAAACCAGTACCACCTCCAAAGAATGGGTTGACAGTTAAGAGCATGATACCAATAGCCTACAATGTATTCAATGCAAGAATTACTTTGATCAACAATCTCAAGAAGCTCTTGAAGGTGGTACCTGTTCATGCTTGCGGGTAATTCTCGTTTTTAGTCTCAAATTGCTTGTCCTTCAAAGTAAATACATGCCACATTTGATGTTTGTGTTGAGGATTGTTGGGAGGGAGTCCCACAGTGGCTAATTAAGGAGATGATCATGGGTTTATAAGTAAGGGATACATCTCCATTGGTATGAGGCATTTTAGGGAAACCAAAAGTAAAGCCATGAGAGCTTATGCTCGAAGTGGACAATATCATACCATTGTGGAGAGTCGTGACTCCTAATAGTTTGACCCTTTGAAAGAATCTTCTTACCCTTTTAACTCGGAATATCAAACATGATCATGTTATTTCCAGTTCATCACTGTAAGATAAGATAGTTGTGTCATTACGTTGCAAGTAACTTCATTCATTTTTTGATAGTTAATCTTACTTTATGCAGTTATTTGTGATCCAAATAGCTTAAACAGAATTGATGGTTATTGCTGTTGGTCTGATTGGAGATTATATTTTGCATTAAGCAGCTTGAAGACTGCTGGACTTCATATTTCGCTTACTTTCTAATGTGCCTCCTTTTATCAATATGATTTAACGTGTGCATAACAATTTAGCATAAAAATGAGTGATAAATTCTCGTATGATTGGTTGAAATAGACAATACTATTGAACGAACCACTGATATGAGGCACCATTAATCCTGTACACAAACATCTTTATCTCAGAAGTCAGACATCACTGCACTTAAGAAATCGTATGAATCTCATACTGAAAAAATAGCTTCCACTCCCATGTTCGGACTGATTTGATCATCATTGTAATCTAAGAGTCATGCTTGTTTGATGTGAGATATCCAACAACTTTCTTCCTCAAACAGAACTTCACAACCTTGTCTAAATGTGATGAAAGTTATGCAGATTTTGCAATGAAATCCATGTGGGACCTGTCGGACATCCATTCAAGTCATGCAGAGGGCCAAATGCCAATTTCCGGAAGGGGCTTCATGAATGGACAAAGGCAATTCTTGAAGACATATTCCTGCCAGTAGAAGCATACCACCTCTACGATCGTCTTGGGAAACGTATCTCTCATCAGGAACGATACTCAATTCCTCGAATTCCTGCCGTGGTTGAGCTTTGCATTCAAGCGGGTGTCGATCTTCCTGAATATCCTGCAAAGAGGAGAAGGAAACCAATCATCCGCATCTCAAAAAGTGAATTCATTGACGCAGATGAAAGTGAACTACCAGATCCTGAACCAGAAGAACCTCTGAAACCTCTGCTCACAGAAATACCAGATTCTGATGTTGTTGCCCCAAGTGACAAAGAAGACATAGCTTGGCTTGCCGACCAAACGCTTCAAGCATGGGAGCAGATGAGGCAAGGAGCCAAAAGACTGATGAAGATGTATCCAGTGAGAGTATGTGGGTATTGTCCAGAGGTACATATTGGTGGCAGTGGGCACAAAGCACAGAACTGTGGAGCTTTCAAGCACCAACAACGAAACGGGCAACATGGTTGGCAAAGGGCCGTGCTCGACGACCTGATACCACCGAGATACGTTTGGCACGTCCCAGACGTAAATGGCCCTCCATTGCAGAGGGAGCTTAGGAACTTTTACGGACAGGCGCCTGCTGTAGTTGAAATATGCATCCAAGCCGGCGCTGCTATCCCAGACAAGTACAAATCAACGATGCGAATGGACGTGGGGATTCCATTGGACATTAAAGAAGCTGAAATGGTAGTTTGAGGTGTTTCCTTCTTGCTCTATAGTTAACCCCTTAAACATTGTTGTATACCTTCAAAATGAATATATGCTAGGTTTTGGCTTTAGATGGTACTTCCTTCCATTTATAATAATATCAACTTACAGAAACAAGAAAAAGGGTTTGAAGAAAAATGATTTGCACATAAACTGATTTCTTAGATTTATTTAAGG

mRNA sequence

GGAATTCGTTCTCATTCTTCTGTTTACTGTCACTGGATAACTATCCTTAACTGAAATCGAAGCTTCCTCATTCTATTTCACAACAATTCCCAGCAAATACATCGATTTTCCTGATGGATTGTAGTTCTTGTAACTACTCTTTTAGTACTATTTCATCTTGTTCTGTTAAATGGATTGAATTTCCTTCAAAATTGGAGTCCCGGAGAATTTTCTTTCAGAAGAAGTCTGAATTTGTGAAGCCCTGTGTAGGCCCAGGTCTTAGTTTGCTGGATTCTTTGCAGCATATTAGTAACTTTGACTTCAAAGCCGGATCCAAATCTATGATTTCATCCTGGAAAATTCCTTGTTCATATTCATTTGCTGTAAGATGTGATCATCCCCAAAATGCTGATTTTCCTCGGTACTATTCCAAGAAGGAGAAGAAGCCATTTCCAGTTCCCATTGTGGAGTTGAGAAGAGCTGCCAGGGAGAGGATGAAAAAGAGTCAAGGCCAGCCGAGAAAACCAGTACCACCTCCAAAGAATGGGTTGACAGTTAAGAGCATGATACCAATAGCCTACAATGTATTCAATGCAAGAATTACTTTGATCAACAATCTCAAGAAGCTCTTGAAGGTGGTACCTGTTCATGCTTGCGGATTTTGCAATGAAATCCATGTGGGACCTGTCGGACATCCATTCAAGTCATGCAGAGGGCCAAATGCCAATTTCCGGAAGGGGCTTCATGAATGGACAAAGGCAATTCTTGAAGACATATTCCTGCCAGTAGAAGCATACCACCTCTACGATCGTCTTGGGAAACGTATCTCTCATCAGGAACGATACTCAATTCCTCGAATTCCTGCCGTGGTTGAGCTTTGCATTCAAGCGGGTGTCGATCTTCCTGAATATCCTGCAAAGAGGAGAAGGAAACCAATCATCCGCATCTCAAAAAGTGAATTCATTGACGCAGATGAAAGTGAACTACCAGATCCTGAACCAGAAGAACCTCTGAAACCTCTGCTCACAGAAATACCAGATTCTGATGTTGTTGCCCCAAGTGACAAAGAAGACATAGCTTGGCTTGCCGACCAAACGCTTCAAGCATGGGAGCAGATGAGGCAAGGAGCCAAAAGACTGATGAAGATGTATCCAGTGAGAGTATGTGGGTATTGTCCAGAGGTACATATTGGTGGCAGTGGGCACAAAGCACAGAACTGTGGAGCTTTCAAGCACCAACAACGAAACGGGCAACATGGTTGGCAAAGGGCCGTGCTCGACGACCTGATACCACCGAGATACGTTTGGCACGTCCCAGACGTAAATGGCCCTCCATTGCAGAGGGAGCTTAGGAACTTTTACGGACAGGCGCCTGCTGTAGTTGAAATATGCATCCAAGCCGGCGCTGCTATCCCAGACAAGTACAAATCAACGATGCGAATGGACGTGGGGATTCCATTGGACATTAAAGAAGCTGAAATGGTAGTTTGAGGTGTTTCCTTCTTGCTCTATAGTTAACCCCTTAAACATTGTTGTATACCTTCAAAATGAATATATGCTAGGTTTTGGCTTTAGATGGTACTTCCTTCCATTTATAATAATATCAACTTACAGAAACAAGAAAAAGGGTTTGAAGAAAAATGATTTGCACATAAACTGATTTCTTAGATTTATTTAAGG

Coding sequence (CDS)

ATGGATTGTAGTTCTTGTAACTACTCTTTTAGTACTATTTCATCTTGTTCTGTTAAATGGATTGAATTTCCTTCAAAATTGGAGTCCCGGAGAATTTTCTTTCAGAAGAAGTCTGAATTTGTGAAGCCCTGTGTAGGCCCAGGTCTTAGTTTGCTGGATTCTTTGCAGCATATTAGTAACTTTGACTTCAAAGCCGGATCCAAATCTATGATTTCATCCTGGAAAATTCCTTGTTCATATTCATTTGCTGTAAGATGTGATCATCCCCAAAATGCTGATTTTCCTCGGTACTATTCCAAGAAGGAGAAGAAGCCATTTCCAGTTCCCATTGTGGAGTTGAGAAGAGCTGCCAGGGAGAGGATGAAAAAGAGTCAAGGCCAGCCGAGAAAACCAGTACCACCTCCAAAGAATGGGTTGACAGTTAAGAGCATGATACCAATAGCCTACAATGTATTCAATGCAAGAATTACTTTGATCAACAATCTCAAGAAGCTCTTGAAGGTGGTACCTGTTCATGCTTGCGGATTTTGCAATGAAATCCATGTGGGACCTGTCGGACATCCATTCAAGTCATGCAGAGGGCCAAATGCCAATTTCCGGAAGGGGCTTCATGAATGGACAAAGGCAATTCTTGAAGACATATTCCTGCCAGTAGAAGCATACCACCTCTACGATCGTCTTGGGAAACGTATCTCTCATCAGGAACGATACTCAATTCCTCGAATTCCTGCCGTGGTTGAGCTTTGCATTCAAGCGGGTGTCGATCTTCCTGAATATCCTGCAAAGAGGAGAAGGAAACCAATCATCCGCATCTCAAAAAGTGAATTCATTGACGCAGATGAAAGTGAACTACCAGATCCTGAACCAGAAGAACCTCTGAAACCTCTGCTCACAGAAATACCAGATTCTGATGTTGTTGCCCCAAGTGACAAAGAAGACATAGCTTGGCTTGCCGACCAAACGCTTCAAGCATGGGAGCAGATGAGGCAAGGAGCCAAAAGACTGATGAAGATGTATCCAGTGAGAGTATGTGGGTATTGTCCAGAGGTACATATTGGTGGCAGTGGGCACAAAGCACAGAACTGTGGAGCTTTCAAGCACCAACAACGAAACGGGCAACATGGTTGGCAAAGGGCCGTGCTCGACGACCTGATACCACCGAGATACGTTTGGCACGTCCCAGACGTAAATGGCCCTCCATTGCAGAGGGAGCTTAGGAACTTTTACGGACAGGCGCCTGCTGTAGTTGAAATATGCATCCAAGCCGGCGCTGCTATCCCAGACAAGTACAAATCAACGATGCGAATGGACGTGGGGATTCCATTGGACATTAAAGAAGCTGAAATGGTAGTTTGA

Protein sequence

MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISNFDFKAGSKSMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARERMKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEIHVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIPRIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEIPDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQNCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICIQAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV

Homology

[Close]

BLAST of Carg09998 vs. NCBI nr
Match: XP_023516533.1 (APO protein 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 933.3 bits (2411), Expect = 3.0e-268
Identity = 449/451 (99.56%), Postives = 449/451 (99.56%), Query Frame = 0


Query: 1   MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISN 60
           MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISN
Sbjct: 1   MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISN 60

Query: 61  FDFKAGSKSMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120
           FDFKAGSKSMISSWKIPCSYS AVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER
Sbjct: 61  FDFKAGSKSMISSWKIPCSYSCAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120

Query: 121 MKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEI 180
           MKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEI
Sbjct: 121 MKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEI 180

Query: 181 HVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIP 240
           HVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIP
Sbjct: 181 HVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIP 240

Query: 241 RIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEI 300
           RIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEI
Sbjct: 241 RIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEI 300

Query: 301 PDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQ 360
           PDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQ
Sbjct: 301 PDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQ 360

Query: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICI 420
           NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICI
Sbjct: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICI 420

Query: 421 QAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV 452
           QAGAAIPDKYKSTMRMDVGIP DIKEAEMVV
Sbjct: 421 QAGAAIPDKYKSTMRMDVGIPSDIKEAEMVV 451

[Close]

BLAST of Carg09998 vs. NCBI nr
Match: XP_022921740.1 (APO protein 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 932.6 bits (2409), Expect = 5.2e-268
Identity = 448/451 (99.33%), Postives = 449/451 (99.56%), Query Frame = 0


Query: 1   MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISN 60
           MDCSSCNYSFSTISSCSVKWIEFPSKLESRRI FQKKSEFVKPCVGPGLSLL SLQHISN
Sbjct: 1   MDCSSCNYSFSTISSCSVKWIEFPSKLESRRISFQKKSEFVKPCVGPGLSLLGSLQHISN 60

Query: 61  FDFKAGSKSMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120
           FDFKAGSKSMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER
Sbjct: 61  FDFKAGSKSMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120

Query: 121 MKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEI 180
           MKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEI
Sbjct: 121 MKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEI 180

Query: 181 HVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIP 240
           HVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIP
Sbjct: 181 HVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIP 240

Query: 241 RIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEI 300
           RIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEI
Sbjct: 241 RIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEI 300

Query: 301 PDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQ 360
           PDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQ
Sbjct: 301 PDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQ 360

Query: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICI 420
           NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWH+PDVNGPPLQRELRNFYGQAPAVVEICI
Sbjct: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHIPDVNGPPLQRELRNFYGQAPAVVEICI 420

Query: 421 QAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV 452
           QAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV
Sbjct: 421 QAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV 451

[Close]

BLAST of Carg09998 vs. NCBI nr
Match: XP_022988576.1 (APO protein 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 918.7 bits (2373), Expect = 7.7e-264
Identity = 445/452 (98.45%), Postives = 447/452 (98.89%), Query Frame = 0


Query: 1   MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKP-CVGPGLSLLDSLQHIS 60
           MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEF+KP  VGPGLSLLDSLQHIS
Sbjct: 1   MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFLKPSVVGPGLSLLDSLQHIS 60

Query: 61  NFDFKAGSKSMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARE 120
           NFD KAGSKSMISSWKIPCSYS AVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARE
Sbjct: 61  NFDSKAGSKSMISSWKIPCSYSCAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARE 120

Query: 121 RMKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNE 180
           RMKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNE
Sbjct: 121 RMKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNE 180

Query: 181 IHVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSI 240
           IHVGPVGHPFKSCRGPNANFRKGLHEWT AILEDIFLPVEAYHLYDRLGKRISHQERYSI
Sbjct: 181 IHVGPVGHPFKSCRGPNANFRKGLHEWTTAILEDIFLPVEAYHLYDRLGKRISHQERYSI 240

Query: 241 PRIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTE 300
           PRIPAVVELCIQAGV+LPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTE
Sbjct: 241 PRIPAVVELCIQAGVNLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTE 300

Query: 301 IPDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKA 360
           IPDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKA
Sbjct: 301 IPDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKA 360

Query: 361 QNCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEIC 420
           QNCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEIC
Sbjct: 361 QNCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEIC 420

Query: 421 IQAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV 452
           IQAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV
Sbjct: 421 IQAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV 452

[Close]

BLAST of Carg09998 vs. NCBI nr
Match: XP_008443853.1 (PREDICTED: APO protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 859.4 bits (2219), Expect = 5.6e-246
Identity = 408/451 (90.47%), Postives = 429/451 (95.12%), Query Frame = 0


Query: 1   MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISN 60
           MDCSSCNYS STISSCSVKW+ FPSK ESRRI FQ KSEF+KP    GLSLLDSLQH+SN
Sbjct: 1   MDCSSCNYSLSTISSCSVKWVAFPSKFESRRISFQNKSEFLKPNTCLGLSLLDSLQHLSN 60

Query: 61  FDFKAGSKSMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120
           F+FKA +KS ISSWKIPCSYS  ++CDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER
Sbjct: 61  FNFKALTKSKISSWKIPCSYSCVIKCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120

Query: 121 MKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEI 180
           MK S+GQPR+PVPPPKNGL VKSMIPIAYNVFNARITL+NNLKKLLKVVPVHACGFCNEI
Sbjct: 121 MKNSKGQPRRPVPPPKNGLLVKSMIPIAYNVFNARITLLNNLKKLLKVVPVHACGFCNEI 180

Query: 181 HVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIP 240
           HVGPVGHPFKSCRG +ANFRKGLHEWTKA LEDIFLPVEAYHLYDRLG+RISHQERYSIP
Sbjct: 181 HVGPVGHPFKSCRGQDANFRKGLHEWTKATLEDIFLPVEAYHLYDRLGRRISHQERYSIP 240

Query: 241 RIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEI 300
           RIPAVVELCIQAGVDLP+YPAKRRRKPI+RISKSE+IDADESELPDPEPE PLKPLLTEI
Sbjct: 241 RIPAVVELCIQAGVDLPDYPAKRRRKPIVRISKSEYIDADESELPDPEPEVPLKPLLTEI 300

Query: 301 PDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQ 360
            DSD VAPSD EDIAWLADQTLQAWEQMR+GAKRLMKMYPVRVCGYCPEVH+G SGHKAQ
Sbjct: 301 LDSDAVAPSDVEDIAWLADQTLQAWEQMRRGAKRLMKMYPVRVCGYCPEVHVGSSGHKAQ 360

Query: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICI 420
           NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPD+NGPPLQRELRNFYGQAPA+VE+CI
Sbjct: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDINGPPLQRELRNFYGQAPAIVEMCI 420

Query: 421 QAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV 452
           QAGAAIPD+YKSTMRMDVGIPLDIKEAEMVV
Sbjct: 421 QAGAAIPDQYKSTMRMDVGIPLDIKEAEMVV 451

[Close]

BLAST of Carg09998 vs. NCBI nr
Match: XP_004146678.1 (PREDICTED: APO protein 2, chloroplastic isoform X1 [Cucumis sativus] >KGN65165.1 hypothetical protein Csa_1G256740 [Cucumis sativus])

HSP 1 Score: 854.7 bits (2207), Expect = 1.4e-244
Identity = 405/451 (89.80%), Postives = 426/451 (94.46%), Query Frame = 0


Query: 1   MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISN 60
           MDCS+CNYS S ISSCSVKW+ FPSK ESRRI FQ KSEF+KP   PGLSLLDSLQH+SN
Sbjct: 1   MDCSTCNYSLSIISSCSVKWVAFPSKFESRRISFQNKSEFLKPNTCPGLSLLDSLQHLSN 60

Query: 61  FDFKAGSKSMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120
           FDFKA +KS ISSWKIPCSYS  ++CDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER
Sbjct: 61  FDFKALTKSKISSWKIPCSYSCVIKCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120

Query: 121 MKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEI 180
           MK S+GQPR  VPPPKNGL VKSMIPIAY VFNARITLINNLKKLLKV+PVHACGFCNEI
Sbjct: 121 MKNSKGQPRMRVPPPKNGLLVKSMIPIAYKVFNARITLINNLKKLLKVIPVHACGFCNEI 180

Query: 181 HVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIP 240
           HVGPVGHPFKSCRG NA+ RKGLHEWTKA LEDIFLPVEAYHLYDRLG+RISHQERYSIP
Sbjct: 181 HVGPVGHPFKSCRGKNASLRKGLHEWTKATLEDIFLPVEAYHLYDRLGRRISHQERYSIP 240

Query: 241 RIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEI 300
           RIPAVVELCIQAGVDLP+YPAKRRRKP+IRISKSE+IDADESELPDPEPE PLKPLLTEI
Sbjct: 241 RIPAVVELCIQAGVDLPDYPAKRRRKPVIRISKSEYIDADESELPDPEPEVPLKPLLTEI 300

Query: 301 PDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQ 360
           PDSD VAPSD EDIAWLADQT+QAWEQMR+GAKRL+KMYPVRVCGYCPEVH+G SGHKAQ
Sbjct: 301 PDSDAVAPSDVEDIAWLADQTIQAWEQMRRGAKRLIKMYPVRVCGYCPEVHVGSSGHKAQ 360

Query: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICI 420
           NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPA+VE+CI
Sbjct: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAIVEMCI 420

Query: 421 QAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV 452
           QAGAAIPD+YKSTMRMDVGIPLDIKEAEMVV
Sbjct: 421 QAGAAIPDEYKSTMRMDVGIPLDIKEAEMVV 451

[Close]

BLAST of Carg09998 vs. TAIR10
Match: AT5G57930.2 (Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 579.7 bits (1493), Expect = 1.5e-165
Identity = 276/443 (62.30%), Postives = 341/443 (76.98%), Query Frame = 0


Query: 9   SFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISNFDFKAGSK 68
           S ST+S  S K + F     +RR       +F+ P          SLQ  S+ +F     
Sbjct: 9   SSSTVSGFSPKSVPFAIHSVTRR-------QFLNPNTFYRFGFSPSLQG-SSIEFSLQLN 68

Query: 69  SMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARERMKKSQGQP 128
           S +   K   S    VR D PQN D P+ Y+++EKKPFPVPIV+LRRAARER+K ++ +P
Sbjct: 69  SRVVLSKERRSLPLVVRNDRPQNEDLPKQYTRREKKPFPVPIVDLRRAARERVKNNKDKP 128

Query: 129 RKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEIHVGPVGHP 188
           ++P+PPPKNG+ VKS++P+AY V+NARI LINNL +L+KVV V+ACG+CNEIHVGP GHP
Sbjct: 129 KRPLPPPKNGMVVKSLVPLAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHP 188

Query: 189 FKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIPRIPAVVEL 248
           FKSC+GPN + RKGLHEWT +++ED+ +P+EAYHL+DRLGKRI H ER+SIPR+PAVVEL
Sbjct: 189 FKSCKGPNTSQRKGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVEL 248

Query: 249 CIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEIPDSDVVAP 308
           CIQ GV++PE+PAKRRRKPIIRI KSEF+DA                 LTE+P S++  P
Sbjct: 249 CIQGGVEIPEFPAKRRRKPIIRIGKSEFVDAXXXXXXXXXXXXXXXXXLTELPVSEITPP 308

Query: 309 SDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQNCGAFKHQ 368
           S +E+   LA++TLQAWE+MR GAK+LM+MY VRVCGYCPEVH+G +GHKAQNCGAFKHQ
Sbjct: 309 SSEEETVSLAEETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQ 368

Query: 369 QRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICIQAGAAIPD 428
           QRNGQHGWQ AVLDDLIPPRYVWHVPDVNGPP+QRELR+FYGQAPAVVEIC QAGA +P+
Sbjct: 369 QRNGQHGWQSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGAVVPE 428

Query: 429 KYKSTMRMDVGIPLDIKEAEMVV 452
            Y++TMR++VGIP  +KEAEMVV
Sbjct: 429 HYRATMRLEVGIPSSVKEAEMVV 443

[Close]

BLAST of Carg09998 vs. TAIR10
Match: AT1G64810.2 (Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 349.4 bits (895), Expect = 3.4e-96
Identity = 170/375 (45.33%), Postives = 236/375 (62.93%), Query Frame = 0


Query: 81  SFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARERMKKSQGQPRKPVPPPKNGLT 140
           SF  R    QN D P    K +KKP+P+P  +++  AR+  K +Q    K + PPKNGL 
Sbjct: 87  SFKKRYVSTQNVDLPPILPKNKKKPYPIPFKQIQEEARKDKKLAQMGIEKQLDPPKNGLL 146

Query: 141 VKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEIHVGPVGHPFKSCRGPNANFR 200
           V +++P+A  V +    LI  L +LL VVPV AC  C  +HV  VGH  + C GP  + R
Sbjct: 147 VPNLVPVADQVIDNWKLLIKGLAQLLHVVPVFACSECGAVHVANVGHNIRDCNGPTNSQR 206

Query: 201 KGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIPRIPAVVELCIQAGVDLPEYP 260
           +G H W K  + D+ +PVE+YH+YD  G+RI H+ R+   RIPA+VELCIQAGV++PEYP
Sbjct: 207 RGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHETRFEYERIPALVELCIQAGVEIPEYP 266

Query: 261 AKRRRKPIIRISKSEFIDAD--ESELPDPEPEEPLKPLLTEIPDSDV---VAPSDKEDIA 320
            +RR +P IR+     ID      E   P+    L   L E+    V     P   EDI 
Sbjct: 267 CRRRTQP-IRMMGKRVIDRGGYHKEPEKPQTSSSLSSPLAELDTLGVFERYPPPTPEDIP 326

Query: 321 WLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQNCGAFKHQQRNGQHG 380
            +A +T+ A+E++R G  +LM+ + V+ CGYC EVH+G  GH  + CG FKHQ R+G+HG
Sbjct: 327 KIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKLCGEFKHQWRDGKHG 386

Query: 381 WQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICIQAGAAIPDKYKSTMR 440
           WQ A++D++ PP YVWHV D+ G PL   LR FYG+APA+VEIC+ +GA +P +YK+ MR
Sbjct: 387 WQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMR 446

Query: 441 MDVGIPLDIKEAEMV 451
           +D+ +P D +EA+MV
Sbjct: 447 LDIIVP-DSQEADMV 459

[Close]

BLAST of Carg09998 vs. TAIR10
Match: AT5G61930.1 (Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-81
Identity = 151/359 (42.06%), Postives = 219/359 (61.00%), Query Frame = 0


Query: 87  DHPQNADFPR-YYSKKEKKPFPVPIVELRRAARERMKKSQGQP-RKPVPPPKNGLTVKSM 146
           + P  AD P+    K E+KP+P P+ EL R A+E  +  + QP R    PP NGL V  +
Sbjct: 39  EDPLYADVPKPPKDKSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGLLVPEL 98

Query: 147 IPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEIHVGPVGHPFKSCRGPNANFRKGLH 206
           + +A+ V   R  L++ L K++  VPVH C  C E+H+G  GH  ++C GP +  R   H
Sbjct: 99  VDVAHCVHRCRNMLLSGLSKIIHHVPVHRCRLCAEVHIGKQGHEIRTCTGPGSGSRSATH 158

Query: 207 EWTKAILEDIFLPVEAYHLYDRLGK-RISHQERYSIPRIPAVVELCIQAGVDLPEYPAKR 266
            W +  + D+ L  + +HLYDR  K R+ H ER+++P+I AV+ELCIQAGVDL ++P+KR
Sbjct: 159 VWKRGRVSDVVLFPKCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKR 218

Query: 267 RRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEIPDSDVVAPSDKEDIAWLADQTLQ 326
           R KP+  I   E    D  ++ D   E  +    T I + D     +K+ +  L+ +T++
Sbjct: 219 RSKPVYSI---EGRIVDFEDVNDGNSELAVTSTTTLIQEDD-RCKEEKKSLKELSFETME 278

Query: 327 AWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQNCGAFKHQQRNGQHGWQRAVLDD 386
           +W +M  G ++LM+ Y V  CGYCPE+ +G  GHK + C A KHQ R+G H WQ A +DD
Sbjct: 279 SWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGMHAWQEATIDD 338

Query: 387 LIPPRYVWHVPD-VNGPPLQRELRNFYGQAPAVVEICIQAGAAIPDKYKSTMRMDVGIP 442
           ++ P YVWHV D  +G  L   L+ FYG+APAV+E+C+Q GA +PD+Y S MR+DV  P
Sbjct: 339 VVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYP 393

[Close]

BLAST of Carg09998 vs. TAIR10
Match: AT3G21740.1 (Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 216.1 bits (549), Expect = 4.5e-56
Identity = 111/295 (37.63%), Postives = 159/295 (53.90%), Query Frame = 0


Query: 141 VKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEIHVGPVGHPFKSCRGPNANFR 200
           VK ++P+A  +  AR  LI+N+  LLKV PV  C FC+E+ VG  GH  ++CR       
Sbjct: 55  VKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSEVFVGKEGHLIETCRSYIRRGN 114

Query: 201 KGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIPRIPAVVELCIQAGVDLPEYP 260
             LHEW    + DI +PVE+YHL++     I HQER+   R+PA++ELC QAG   PE  
Sbjct: 115 NRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDYDRVPAILELCCQAGAIHPE-- 174

Query: 261 AKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEIPDSDVVAPSDKEDIAWLADQ 320
                         E +   E        EE ++ L                D+ ++   
Sbjct: 175 --------------EILQYSEIHDNPQISEEDIRSL-------------PAGDLKYVGAN 234

Query: 321 TLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQNCGAFKHQQRNGQHGWQRAV 380
            L AWE++R G K+L+ +YP +VC  C EVH+G SGHKA+ CG FK++   G H W++A 
Sbjct: 235 ALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWRGTHYWEKAG 294

Query: 381 LDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICIQAGAAIPDKYKSTMR 436
           ++DL+P + VWH    +   L  E R++YG APA+V +C   GA +P KY   M+
Sbjct: 295 VNDLVPEKMVWHRRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYACKMK 320

[Close]

BLAST of Carg09998 vs. Swiss-Prot
Match: sp|Q8W4A5|APO2_ARATH (APO protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO2 PE=2 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 1.1e-163
Identity = 276/447 (61.74%), Postives = 341/447 (76.29%), Query Frame = 0


Query: 5   SCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISNFDFK 64
           S  YS  + S  S K + F     +RR       +F+ P          SLQ  S+ +F 
Sbjct: 2   SITYSAISFSGFSPKSVPFAIHSVTRR-------QFLNPNTFYRFGFSPSLQG-SSIEFS 61

Query: 65  AGSKSMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARERMKKS 124
               S +   K   S    VR D PQN D P+ Y+++EKKPFPVPIV+LRRAARER+K +
Sbjct: 62  LQLNSRVVLSKERRSLPLVVRNDRPQNEDLPKQYTRREKKPFPVPIVDLRRAARERVKNN 121

Query: 125 QGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEIHVGP 184
           + +P++P+PPPKNG+ VKS++P+AY V+NARI LINNL +L+KVV V+ACG+CNEIHVGP
Sbjct: 122 KDKPKRPLPPPKNGMVVKSLVPLAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGP 181

Query: 185 VGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIPRIPA 244
            GHPFKSC+GPN + RKGLHEWT +++ED+ +P+EAYHL+DRLGKRI H ER+SIPR+PA
Sbjct: 182 YGHPFKSCKGPNTSQRKGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPA 241

Query: 245 VVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEIPDSD 304
           VVELCIQ GV++PE+PAKRRRKPIIRI KSEF+DA                 LTE+P S+
Sbjct: 242 VVELCIQGGVEIPEFPAKRRRKPIIRIGKSEFVDAXXXXXXXXXXXXXXXXXLTELPVSE 301

Query: 305 VVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQNCGA 364
           +  PS +E+   LA++TLQAWE+MR GAK+LM+MY VRVCGYCPEVH+G +GHKAQNCGA
Sbjct: 302 ITPPSSEEETVSLAEETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGA 361

Query: 365 FKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICIQAGA 424
           FKHQQRNGQHGWQ AVLDDLIPPRYVWHVPDVNGPP+QRELR+FYGQAPAVVEIC QAGA
Sbjct: 362 FKHQQRNGQHGWQSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGA 421

Query: 425 AIPDKYKSTMRMDVGIPLDIKEAEMVV 452
            +P+ Y++TMR++VGIP  +KEAEMVV
Sbjct: 422 VVPEHYRATMRLEVGIPSSVKEAEMVV 440

[Close]

BLAST of Carg09998 vs. Swiss-Prot
Match: sp|Q9XIR4|APO1_ARATH (APO protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO1 PE=2 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 6.1e-95
Identity = 170/375 (45.33%), Postives = 236/375 (62.93%), Query Frame = 0


Query: 81  SFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARERMKKSQGQPRKPVPPPKNGLT 140
           SF  R    QN D P    K +KKP+P+P  +++  AR+  K +Q    K + PPKNGL 
Sbjct: 63  SFKKRYVSTQNVDLPPILPKNKKKPYPIPFKQIQEEARKDKKLAQMGIEKQLDPPKNGLL 122

Query: 141 VKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEIHVGPVGHPFKSCRGPNANFR 200
           V +++P+A  V +    LI  L +LL VVPV AC  C  +HV  VGH  + C GP  + R
Sbjct: 123 VPNLVPVADQVIDNWKLLIKGLAQLLHVVPVFACSECGAVHVANVGHNIRDCNGPTNSQR 182

Query: 201 KGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIPRIPAVVELCIQAGVDLPEYP 260
           +G H W K  + D+ +PVE+YH+YD  G+RI H+ R+   RIPA+VELCIQAGV++PEYP
Sbjct: 183 RGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHETRFEYERIPALVELCIQAGVEIPEYP 242

Query: 261 AKRRRKPIIRISKSEFIDAD--ESELPDPEPEEPLKPLLTEIPDSDV---VAPSDKEDIA 320
            +RR +P IR+     ID      E   P+    L   L E+    V     P   EDI 
Sbjct: 243 CRRRTQP-IRMMGKRVIDRGGYHKEPEKPQTSSSLSSPLAELDTLGVFERYPPPTPEDIP 302

Query: 321 WLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQNCGAFKHQQRNGQHG 380
            +A +T+ A+E++R G  +LM+ + V+ CGYC EVH+G  GH  + CG FKHQ R+G+HG
Sbjct: 303 KIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKLCGEFKHQWRDGKHG 362

Query: 381 WQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICIQAGAAIPDKYKSTMR 440
           WQ A++D++ PP YVWHV D+ G PL   LR FYG+APA+VEIC+ +GA +P +YK+ MR
Sbjct: 363 WQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMR 422

Query: 441 MDVGIPLDIKEAEMV 451
           +D+ +P D +EA+MV
Sbjct: 423 LDIIVP-DSQEADMV 435

[Close]

BLAST of Carg09998 vs. Swiss-Prot
Match: sp|Q9FH50|APO3_ARATH (APO protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO3 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 2.5e-80
Identity = 151/359 (42.06%), Postives = 219/359 (61.00%), Query Frame = 0


Query: 87  DHPQNADFPR-YYSKKEKKPFPVPIVELRRAARERMKKSQGQP-RKPVPPPKNGLTVKSM 146
           + P  AD P+    K E+KP+P P+ EL R A+E  +  + QP R    PP NGL V  +
Sbjct: 39  EDPLYADVPKPPKDKSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGLLVPEL 98

Query: 147 IPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEIHVGPVGHPFKSCRGPNANFRKGLH 206
           + +A+ V   R  L++ L K++  VPVH C  C E+H+G  GH  ++C GP +  R   H
Sbjct: 99  VDVAHCVHRCRNMLLSGLSKIIHHVPVHRCRLCAEVHIGKQGHEIRTCTGPGSGSRSATH 158

Query: 207 EWTKAILEDIFLPVEAYHLYDRLGK-RISHQERYSIPRIPAVVELCIQAGVDLPEYPAKR 266
            W +  + D+ L  + +HLYDR  K R+ H ER+++P+I AV+ELCIQAGVDL ++P+KR
Sbjct: 159 VWKRGRVSDVVLFPKCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKR 218

Query: 267 RRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEIPDSDVVAPSDKEDIAWLADQTLQ 326
           R KP+  I   E    D  ++ D   E  +    T I + D     +K+ +  L+ +T++
Sbjct: 219 RSKPVYSI---EGRIVDFEDVNDGNSELAVTSTTTLIQEDD-RCKEEKKSLKELSFETME 278

Query: 327 AWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQNCGAFKHQQRNGQHGWQRAVLDD 386
           +W +M  G ++LM+ Y V  CGYCPE+ +G  GHK + C A KHQ R+G H WQ A +DD
Sbjct: 279 SWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGMHAWQEATIDD 338

Query: 387 LIPPRYVWHVPD-VNGPPLQRELRNFYGQAPAVVEICIQAGAAIPDKYKSTMRMDVGIP 442
           ++ P YVWHV D  +G  L   L+ FYG+APAV+E+C+Q GA +PD+Y S MR+DV  P
Sbjct: 339 VVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYP 393

[Close]

BLAST of Carg09998 vs. Swiss-Prot
Match: sp|Q9LSZ0|APO4_ARATH (APO protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO4 PE=2 SV=2)

HSP 1 Score: 216.1 bits (549), Expect = 8.1e-55
Identity = 111/295 (37.63%), Postives = 159/295 (53.90%), Query Frame = 0


Query: 141 VKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEIHVGPVGHPFKSCRGPNANFR 200
           VK ++P+A  +  AR  LI+N+  LLKV PV  C FC+E+ VG  GH  ++CR       
Sbjct: 55  VKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSEVFVGKEGHLIETCRSYIRRGN 114

Query: 201 KGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIPRIPAVVELCIQAGVDLPEYP 260
             LHEW    + DI +PVE+YHL++     I HQER+   R+PA++ELC QAG   PE  
Sbjct: 115 NRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDYDRVPAILELCCQAGAIHPE-- 174

Query: 261 AKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEIPDSDVVAPSDKEDIAWLADQ 320
                         E +   E        EE ++ L                D+ ++   
Sbjct: 175 --------------EILQYSEIHDNPQISEEDIRSL-------------PAGDLKYVGAN 234

Query: 321 TLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQNCGAFKHQQRNGQHGWQRAV 380
            L AWE++R G K+L+ +YP +VC  C EVH+G SGHKA+ CG FK++   G H W++A 
Sbjct: 235 ALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWRGTHYWEKAG 294

Query: 381 LDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICIQAGAAIPDKYKSTMR 436
           ++DL+P + VWH    +   L  E R++YG APA+V +C   GA +P KY   M+
Sbjct: 295 VNDLVPEKMVWHRRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYACKMK 320

[Close]

BLAST of Carg09998 vs. TrEMBL
Match: tr|A0A1S3B8J0|A0A1S3B8J0_CUCME (APO protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487348 PE=4 SV=1)

HSP 1 Score: 859.4 bits (2219), Expect = 3.7e-246
Identity = 408/451 (90.47%), Postives = 429/451 (95.12%), Query Frame = 0


Query: 1   MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISN 60
           MDCSSCNYS STISSCSVKW+ FPSK ESRRI FQ KSEF+KP    GLSLLDSLQH+SN
Sbjct: 1   MDCSSCNYSLSTISSCSVKWVAFPSKFESRRISFQNKSEFLKPNTCLGLSLLDSLQHLSN 60

Query: 61  FDFKAGSKSMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120
           F+FKA +KS ISSWKIPCSYS  ++CDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER
Sbjct: 61  FNFKALTKSKISSWKIPCSYSCVIKCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120

Query: 121 MKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEI 180
           MK S+GQPR+PVPPPKNGL VKSMIPIAYNVFNARITL+NNLKKLLKVVPVHACGFCNEI
Sbjct: 121 MKNSKGQPRRPVPPPKNGLLVKSMIPIAYNVFNARITLLNNLKKLLKVVPVHACGFCNEI 180

Query: 181 HVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIP 240
           HVGPVGHPFKSCRG +ANFRKGLHEWTKA LEDIFLPVEAYHLYDRLG+RISHQERYSIP
Sbjct: 181 HVGPVGHPFKSCRGQDANFRKGLHEWTKATLEDIFLPVEAYHLYDRLGRRISHQERYSIP 240

Query: 241 RIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEI 300
           RIPAVVELCIQAGVDLP+YPAKRRRKPI+RISKSE+IDADESELPDPEPE PLKPLLTEI
Sbjct: 241 RIPAVVELCIQAGVDLPDYPAKRRRKPIVRISKSEYIDADESELPDPEPEVPLKPLLTEI 300

Query: 301 PDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQ 360
            DSD VAPSD EDIAWLADQTLQAWEQMR+GAKRLMKMYPVRVCGYCPEVH+G SGHKAQ
Sbjct: 301 LDSDAVAPSDVEDIAWLADQTLQAWEQMRRGAKRLMKMYPVRVCGYCPEVHVGSSGHKAQ 360

Query: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICI 420
           NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPD+NGPPLQRELRNFYGQAPA+VE+CI
Sbjct: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDINGPPLQRELRNFYGQAPAIVEMCI 420

Query: 421 QAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV 452
           QAGAAIPD+YKSTMRMDVGIPLDIKEAEMVV
Sbjct: 421 QAGAAIPDQYKSTMRMDVGIPLDIKEAEMVV 451

[Close]

BLAST of Carg09998 vs. TrEMBL
Match: tr|A0A0A0LTB5|A0A0A0LTB5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256740 PE=4 SV=1)

HSP 1 Score: 854.7 bits (2207), Expect = 9.1e-245
Identity = 405/451 (89.80%), Postives = 426/451 (94.46%), Query Frame = 0


Query: 1   MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISN 60
           MDCS+CNYS S ISSCSVKW+ FPSK ESRRI FQ KSEF+KP   PGLSLLDSLQH+SN
Sbjct: 1   MDCSTCNYSLSIISSCSVKWVAFPSKFESRRISFQNKSEFLKPNTCPGLSLLDSLQHLSN 60

Query: 61  FDFKAGSKSMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120
           FDFKA +KS ISSWKIPCSYS  ++CDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER
Sbjct: 61  FDFKALTKSKISSWKIPCSYSCVIKCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120

Query: 121 MKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEI 180
           MK S+GQPR  VPPPKNGL VKSMIPIAY VFNARITLINNLKKLLKV+PVHACGFCNEI
Sbjct: 121 MKNSKGQPRMRVPPPKNGLLVKSMIPIAYKVFNARITLINNLKKLLKVIPVHACGFCNEI 180

Query: 181 HVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIP 240
           HVGPVGHPFKSCRG NA+ RKGLHEWTKA LEDIFLPVEAYHLYDRLG+RISHQERYSIP
Sbjct: 181 HVGPVGHPFKSCRGKNASLRKGLHEWTKATLEDIFLPVEAYHLYDRLGRRISHQERYSIP 240

Query: 241 RIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEI 300
           RIPAVVELCIQAGVDLP+YPAKRRRKP+IRISKSE+IDADESELPDPEPE PLKPLLTEI
Sbjct: 241 RIPAVVELCIQAGVDLPDYPAKRRRKPVIRISKSEYIDADESELPDPEPEVPLKPLLTEI 300

Query: 301 PDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQ 360
           PDSD VAPSD EDIAWLADQT+QAWEQMR+GAKRL+KMYPVRVCGYCPEVH+G SGHKAQ
Sbjct: 301 PDSDAVAPSDVEDIAWLADQTIQAWEQMRRGAKRLIKMYPVRVCGYCPEVHVGSSGHKAQ 360

Query: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICI 420
           NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPA+VE+CI
Sbjct: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAIVEMCI 420

Query: 421 QAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV 452
           QAGAAIPD+YKSTMRMDVGIPLDIKEAEMVV
Sbjct: 421 QAGAAIPDEYKSTMRMDVGIPLDIKEAEMVV 451

[Close]

BLAST of Carg09998 vs. TrEMBL
Match: tr|A0A061GQW5|A0A061GQW5_THECC (APO protein 2, chloroplast, putative OS=Theobroma cacao OX=3641 GN=TCM_037039 PE=4 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 7.6e-191
Identity = 323/451 (71.62%), Postives = 376/451 (83.37%), Query Frame = 0


Query: 1   MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISN 60
           +DC S N+         VK +  P ++    + +  +++F+K  + PGLSLL SL+H S+
Sbjct: 11  VDCGSTNH------LSHVKLVPLPPRIGPSMLSYHSRADFLKLNLYPGLSLLSSLEHRSS 70

Query: 61  FDFKAGSKSMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120
              K  S+    S K     +  VRCDHPQNADFPRYYS+KEKKPFPVP++ELRRAARER
Sbjct: 71  -KLKLQSEPRAPSRKFHRPCALVVRCDHPQNADFPRYYSRKEKKPFPVPVLELRRAARER 130

Query: 121 MKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEI 180
            KKS+GQP+KPVPPPKNGL VKS++P+AY+V NAR+TLINNLKKLLKVV VHACG+CNEI
Sbjct: 131 AKKSKGQPKKPVPPPKNGLIVKSLVPLAYDVLNARVTLINNLKKLLKVVKVHACGYCNEI 190

Query: 181 HVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIP 240
           HVGPVGHPFKSCRG +A+FRKGLHEWT A +ED+ LPV+AYHLYDRLGKRI H ER+SIP
Sbjct: 191 HVGPVGHPFKSCRGQHASFRKGLHEWTYATVEDVLLPVDAYHLYDRLGKRIRHDERFSIP 250

Query: 241 RIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEI 300
           RIPAVVELCIQAGV+LPE+  KRRRK IIRI K EFIDADESELPDP PE PLK +LTEI
Sbjct: 251 RIPAVVELCIQAGVNLPEFLTKRRRKTIIRIGKREFIDADESELPDPVPEVPLKAILTEI 310

Query: 301 PDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQ 360
           PD +VVAP D+E+   LA++TLQAWEQMR+GAK+LM+MYPVRVCGYCPEVH+G SGHKAQ
Sbjct: 311 PDPEVVAPCDEEETILLAEETLQAWEQMRRGAKKLMRMYPVRVCGYCPEVHVGPSGHKAQ 370

Query: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICI 420
           NCGA KHQQRNGQHGWQ AVLDDLIPPRYVWHVPDV G PLQRELR+FYGQAPAVVEIC+
Sbjct: 371 NCGAHKHQQRNGQHGWQAAVLDDLIPPRYVWHVPDVKGLPLQRELRSFYGQAPAVVEICV 430

Query: 421 QAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV 452
           QAGAA+PD+YK TMR+D+GIP  ++EAEMVV
Sbjct: 431 QAGAAVPDQYKPTMRLDIGIPTSLREAEMVV 454

[Close]

BLAST of Carg09998 vs. TrEMBL
Match: tr|A0A2P5FNP4|A0A2P5FNP4_9ROSA (APO domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_049290 PE=4 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 4.9e-190
Identity = 322/451 (71.40%), Postives = 379/451 (84.04%), Query Frame = 0


Query: 1   MDCSSCNYSFSTISSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISN 60
           M+C S + SF  ++  S K +    K+   R+    KSE ++P   PGL  L S QH  N
Sbjct: 1   MECGSGSSSFGAMALFSGKGLASAPKMVPFRVSTSVKSESLRPNPCPGLGFLHSFQHF-N 60

Query: 61  FDFKAGSKSMISSWKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARER 120
              K  SK   SS K+  SY+  +R D+PQN D PRYYS+KEKKPFP+PIVELRRAARER
Sbjct: 61  HKLKVQSK---SSRKMHPSYALVIRADYPQNTDLPRYYSRKEKKPFPIPIVELRRAARER 120

Query: 121 MKKSQGQPRKPVPPPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEI 180
           +KK++G+PRKPVPPPKNG+ VKS IPIAY+V+NARITLINNLKKLL+VVPVHAC +CNEI
Sbjct: 121 IKKNKGKPRKPVPPPKNGMLVKSFIPIAYDVYNARITLINNLKKLLRVVPVHACKWCNEI 180

Query: 181 HVGPVGHPFKSCRGPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIP 240
           HVGP GHPF+SC G NA+ R+GLH+W+ A +EDIFLPV+AYHLYDRLGKRI+H ER+SIP
Sbjct: 181 HVGPTGHPFRSCGGQNASIRRGLHDWSTATVEDIFLPVDAYHLYDRLGKRIAHYERFSIP 240

Query: 241 RIPAVVELCIQAGVDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEI 300
           R+PA+VELCIQAGVD+P++P KRRRKPIIRISKSEF+DADESELPD +PE P +P+LTEI
Sbjct: 241 RLPALVELCIQAGVDVPDFPTKRRRKPIIRISKSEFVDADESELPDLDPEAPKRPILTEI 300

Query: 301 PDSDVVAPSDKEDIAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQ 360
           PD +VV PS++E+   LA +TLQAWEQMR+GA +LMK+YPVRVCGYCPEVHIG SGHKAQ
Sbjct: 301 PDFEVVGPSNEEETTLLAVETLQAWEQMRKGAHKLMKLYPVRVCGYCPEVHIGPSGHKAQ 360

Query: 361 NCGAFKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICI 420
           NCGA KHQQRNGQHGWQ AVLDDLIPPRYVWHVPDVNGPPLQR+LR+FYGQAPAVVE+CI
Sbjct: 361 NCGAHKHQQRNGQHGWQSAVLDDLIPPRYVWHVPDVNGPPLQRDLRSFYGQAPAVVEMCI 420

Query: 421 QAGAAIPDKYKSTMRMDVGIPLDIKEAEMVV 452
           QAGAA+PD+Y+ TMR+DVGIP DIKEAEMVV
Sbjct: 421 QAGAAVPDQYRGTMRLDVGIPTDIKEAEMVV 447

[Close]

BLAST of Carg09998 vs. TrEMBL
Match: tr|A0A1U8MTU4|A0A1U8MTU4_GOSHI (APO protein 2, chloroplastic-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107940064 PE=4 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 4.9e-190
Identity = 316/438 (72.15%), Postives = 371/438 (84.70%), Query Frame = 0


Query: 14  SSCSVKWIEFPSKLESRRIFFQKKSEFVKPCVGPGLSLLDSLQHISNFDFKAGSKSMISS 73
           S  S++ +  P ++    + +  +++F+K      L+ L S QH  N   K  SK +  S
Sbjct: 4   SPSSMRCLCLPPRMGPSMLSYHSRADFLKL---NSLTSLSSFQH-RNGKLKLQSKPIAPS 63

Query: 74  WKIPCSYSFAVRCDHPQNADFPRYYSKKEKKPFPVPIVELRRAARERMKKSQGQPRKPVP 133
            K+    +  +RCDHPQNAD PRYYSKKEKKPFPVPIVELRRAARER KKS+GQP+KPVP
Sbjct: 64  RKLHQPCALVIRCDHPQNADLPRYYSKKEKKPFPVPIVELRRAARERFKKSRGQPKKPVP 123

Query: 134 PPKNGLTVKSMIPIAYNVFNARITLINNLKKLLKVVPVHACGFCNEIHVGPVGHPFKSCR 193
           PPKNGL VKS++P+AY+VFN RITLINNLKKLLKVV VHAC +CNEIHVGP+GHPFKSCR
Sbjct: 124 PPKNGLIVKSLVPLAYDVFNERITLINNLKKLLKVVKVHACRYCNEIHVGPIGHPFKSCR 183

Query: 194 GPNANFRKGLHEWTKAILEDIFLPVEAYHLYDRLGKRISHQERYSIPRIPAVVELCIQAG 253
           G  A+ RKGLHEWT A +ED+F+PV++YHLYDRLGKRI H ER+SIPR+PAVVELCIQAG
Sbjct: 184 GHRASIRKGLHEWTYATVEDVFVPVDSYHLYDRLGKRIRHDERFSIPRLPAVVELCIQAG 243

Query: 254 VDLPEYPAKRRRKPIIRISKSEFIDADESELPDPEPEEPLKPLLTEIPDSDVVAPSDKED 313
           VDLPE+P KRRRKPIIRI KSEF+DADESELPDP PE PLKP+LTEIPD+++VAP D+E+
Sbjct: 244 VDLPEFPTKRRRKPIIRIGKSEFVDADESELPDPVPEPPLKPILTEIPDTEIVAPRDEEE 303

Query: 314 IAWLADQTLQAWEQMRQGAKRLMKMYPVRVCGYCPEVHIGGSGHKAQNCGAFKHQQRNGQ 373
              LA++TL+AWEQMR+GAK+LM+MYPVRVCGYCPEVH+G SGHKAQNCGA KHQQRNGQ
Sbjct: 304 TIQLAEETLEAWEQMRRGAKKLMRMYPVRVCGYCPEVHVGPSGHKAQNCGAHKHQQRNGQ 363

Query: 374 HGWQRAVLDDLIPPRYVWHVPDVNGPPLQRELRNFYGQAPAVVEICIQAGAAIPDKYKST 433
           HGWQ AVLDDLIPPRYVWHVPDVNGPPLQRELR+FYGQAPAVVEIC+QAGA +PD+YK T
Sbjct: 364 HGWQSAVLDDLIPPRYVWHVPDVNGPPLQRELRSFYGQAPAVVEICVQAGADVPDQYKPT 423

Query: 434 MRMDVGIPLDIKEAEMVV 452
           MR+D+GIP  ++EAEMVV
Sbjct: 424 MRLDIGIPTSLREAEMVV 437

The following BLAST results are available for this feature:

BLAST of Carg09998 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516533.1	3.0e-268	99.56	APO protein 2, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022921740.1	5.2e-268	99.33	APO protein 2, chloroplastic [Cucurbita moschata]	[more]
XP_022988576.1	7.7e-264	98.45	APO protein 2, chloroplastic [Cucurbita maxima]	[more]
XP_008443853.1	5.6e-246	90.47	PREDICTED: APO protein 2, chloroplastic [Cucumis melo]	[more]
XP_004146678.1	1.4e-244	89.80	PREDICTED: APO protein 2, chloroplastic isoform X1 [Cucumis sativus] >KGN65165.1...	[more]

BLAST of Carg09998 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G57930.2	1.5e-165	62.30	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT1G64810.2	3.4e-96	45.33	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT5G61930.1	1.4e-81	42.06	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT3G21740.1	4.5e-56	37.63	Arabidopsis thaliana protein of unknown function (DUF794)	[more]

BLAST of Carg09998 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8W4A5\|APO2_ARATH	1.1e-163	61.74	APO protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO2 PE=2 SV=1	[more]
sp\|Q9XIR4\|APO1_ARATH	6.1e-95	45.33	APO protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO1 PE=2 SV=1	[more]
sp\|Q9FH50\|APO3_ARATH	2.5e-80	42.06	APO protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO3 PE=2 SV=1	[more]
sp\|Q9LSZ0\|APO4_ARATH	8.1e-55	37.63	APO protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO4 PE=2 SV=2	[more]

BLAST of Carg09998 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B8J0\|A0A1S3B8J0_CUCME	3.7e-246	90.47	APO protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487348 PE=4 SV=1	[more]
tr\|A0A0A0LTB5\|A0A0A0LTB5_CUCSA	9.1e-245	89.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256740 PE=4 SV=1	[more]
tr\|A0A061GQW5\|A0A061GQW5_THECC	7.6e-191	71.62	APO protein 2, chloroplast, putative OS=Theobroma cacao OX=3641 GN=TCM_037039 PE...	[more]
tr\|A0A2P5FNP4\|A0A2P5FNP4_9ROSA	4.9e-190	71.40	APO domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_049290 ...	[more]
tr\|A0A1U8MTU4\|A0A1U8MTU4_GOSHI	4.9e-190	72.15	APO protein 2, chloroplastic-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LO...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR023342	APO_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09998-RA	Carg09998-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023342	APO domain	PFAM	PF05634	APO_RNA-bind	coord: 80..278 e-value: 4.7E-98 score: 326.4 coord: 317..435 e-value: 1.4E-27 score: 96.4
IPR023342	APO domain	PROSITE	PS51499	APO	coord: 173..258 score: 29.222
IPR023342	APO domain	PROSITE	PS51499	APO	coord: 343..428 score: 31.614
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..137
None	No IPR available	PANTHER	PTHR10388:SF15	APO PROTEIN 2, CHLOROPLASTIC	coord: 33..451
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 33..451

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09998	Cla018738	Watermelon (97103) v1	carwmB0126
Carg09998	Csa1G256740	Cucumber (Chinese Long) v2	carcuB0136
Carg09998	MELO3C010216	Melon (DHL92) v3.5.1	carmeB0131
Carg09998	ClCG06G012440	Watermelon (Charleston Gray)	carwcgB0125
Carg09998	CSPI01G17730	Wild cucumber (PI 183967)	carcpiB0138
Carg09998	CmaCh10G004630	Cucurbita maxima (Rimu)	carcmaB0166
Carg09998	CmoCh10G004970	Cucurbita moschata (Rifu)	carcmoB0172
Carg09998	Lsi06G011510	Bottle gourd (USVL1VR-Ls)	carlsiB117
Carg09998	Cp4.1LG18g05700	Cucurbita pepo (Zucchini)	carcpeB0185
Carg09998	CsGy1G017900	Cucumber (Gy14) v2	carcgybB0132
Carg09998	MELO3C010216.2	Melon (DHL92) v3.6.1	carmedB0135
Carg09998	CsaV3_1G029000	Cucumber (Chinese Long) v3	carcucB0142
Carg09998	Cla97C06G121680	Watermelon (97103) v2	carwmbB0133
Carg09998	Bhi02G000683	Wax gourd	carwgoB0165

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09998	Silver-seed gourd	carcarB151
Carg09998	Silver-seed gourd	carcarB154
Carg09998	Cucurbita maxima (Rimu)	carcmaB0165
Carg09998	Cucurbita maxima (Rimu)	carcmaB0169
Carg09998	Cucurbita moschata (Rifu)	carcmoB0175
Carg09998	Cucurbita pepo (Zucchini)	carcpeB0186
Carg09998	Cucumber (Chinese Long) v2	carcuB0133
Carg09998	Watermelon (97103) v2	carwmbB0132
Carg09998	Wax gourd	carwgoB0160