Carg09841 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09841
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	TATA-binding protein-associated factor 2N
Location	Cucurbita_argyrosperma_scaffold_030 : 90509 .. 95520 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCAGGGGTAAAGACTCTACGACTCACCATCAGCCGTTATTGAGCAGTCTTGTTGTCCGGCCTTCAAATAGTGACGGGGGTGGTGGTGGAGTCGGTGGAACCAGTGGCGGCCGCGTTGGTCGTGGAAGCGATTATGAGGCGGGTGAGGTTCCCCGTGACCCTCCACAATATTCTCGATTGGATCGATATTCAGATGATTTGGGTTCGTTATTATTCTACCGTACACCTTTGTTTTTGCTCGGTTTTCGAGCTATGATTGAATGAGTAGTTTCTGTGCTTAAATGTTTTTTTTTTTTTTTCCCTTCTAAAAAAATTGTCACCGTGTTGAAGTTAATTGCTTGGCGACTTTAGGTAGGATTTTTATGCATTATTTGGTGGAAAACTTATTTTCAATGACAGAAAGTAAATTACAATCCAATCCGAGTCAATGGAGATTATTAGATTGTTCATCGCGGCTAAAAGACGACTTAAAGCTTTAAAGGGAAAGTGATGTTTACTCCAAGATAATGTAGTCAGTCACTATTGATTCAACAAAGCTATCCAAACCCTTACCTTTTGCAGTTAGAGGTTCGCATGGTCCTTTCTAGCCTAAGTTTTCAATAAGACGCTCCATTGATTCATAGCCACAGAATCACCTTCTCTTTTATGGAAGGATGGTCGCTGAGTCTTGATACCTTCAGAATTTATATGATATATCAATGTGCTCTCTCAGAAGTTGATGTAAAGATTACAGATACATAAATGTGTATATAACTTGTAAATTTATGTCACTACATGGTTACAAGTTCCTTCCATTAGGTTCCTTGTCTCAAAATTATAGGCGTCCTTGTAAATTTTGTTTCAGCTAAATTCCAGTTTGCGAGTTCTGTTTCAATTGTGGAGGGATAATTTAGTTAACCGAAGTATGTTGTAGTTTCATGGGAGATGGAACCCTTAGATATGCTTCGAAAGAAAATAAAGAAAACCATCCTGGCTCTCTTTTCCTGGATGGATAATTGAAGAAATCTTCTCTATACTCTTGTTGGTCTTTTCTCATATTTTTTAGTTAGACCTTATCAAAGAGCTTTGCCAAGATAATTGCAGTTTGACTCATCTGTATTATTATTATTCTCCCTGGTCCTTCTTGCTGCCTTACCACAGAGAACTTATGCCCCCCCCCCCCACGCCCCCCCGGATATGAATGCATGCATTTATAGACAAATATCCATCTGCCGTTGGTAAGAGAGGATGATTTTTTTTATGTCTTTCACCTAGAGGAATGCTATCTAAGATTTTTACTCAAAATGGTGGATTATTGGAATTAATGGGTTTCACCGTTGATTCCGACCAATTTATGACGGCGTTTGGTGAGTTCAATAATCATGCATTATGTATACCCTGCCATTAGAGACACAGTCGAGGGCCAATTCCACAGGCCAGATTTTCATTTTCTTTTTTTTGAAACTTGTTGGAGAGGATGTATTGGTTATTTGCAGAAGATATTTGAGTATTTTTCCTAGATCTCTAGCAAACTTTTTTATAAGCTTATATTCTTATCTCGTGCAAACTTAGTTTAATTTATTAGAAAATATCGAAGTGTGTATGTAATTTGACGTTTTCTTTTGATTCATCAAATACTAGGATAGGATGCATTGATAACTAGGGTTTTGCAAATCCGTTTTTGGTTATCACTTTGATCTTATAGAAAATGTTGTGATGTTCCGGTGACAAATGAATTCCGTGGCCTCTTTGTTTCTTTTATTTTATCCCCATTTTCTTTTGCATATCGAGAATGTCAATCTACTTCCGCATGTCAAACTTTTTTTCTGGGAATAAAATTTTCTATTCTCTTACAGCTTTGTGTTGCCGCCTGCAAGAACTTAGATCTTGAGGAGGGCTTTGGGTAAGTGCAGTCTCAGTTCACGATCCTGGGAATTGCTCTTTTTTCCATGTTAAGACAATTTAATTTTGGGGTTAAAATTTGTGCAAGAAATTCTGGGTTGCTGAGTGGAGAGCTATCAATTCAACCGTTGTCATTTTGGGATATTTATGGTATTGGGCTTGGTTGGAGTAAGATATGTTTGAATACTGATCATAATCAAATCATGGTGAGGTGAGGGTTTTCTCTTGAGAAATTGAAGGCGATCAAATAACAAGCTAAAGAAGTGTTGTTGGCCTGCCTGGTTGAGACTTTTGGTATGAGCTCTAAATGAACTTAATGGTGCTTGACTTTGGCTCTCTGCAAGAAATGAACTTAAAGGTGGACTTTTTCACTGTCTATATTTCCATCCAAGGGGTGAGGTTATTCTCATGGAACAGACATTGATTGGGTTGTATTGGTTGATTAAGGGCCATCTGGGTTATGTATAGCAATTCTTGATCTATTTTTCAGATTCATTAAGGGTTGATTTGCAGGAAAACTTGGGATCTTCATATTTCATTTTGTACCCCATCCTACAATTAGGGCTTTGTTTTAATTAAGTATTTGGTAGTGTGAATTGGTATAGCAATGGCAGCCCAGTGGCCTACAATTGAATTAACTGCATTCCTCTCATCCTTTCAACTCTTACAAATCATGGTCAATGATTGAAGGTATCATTGGTCATTTCAACAGGATGTGGCTAGCCAACTAGACTCTACGGAAAATTGTTCTTGCAGTATGCATGGAAATCCATCGGTATGATTTGGAAAGCAGTAACGAACTTTTGTGACCATGCAAGTAAGATTTGGAGTTGACTTCTTAAATAACAGAGGAGTAGGGTGGGTGCCATTGCTCAATCTGGATTTTGGATACTTTAATTTATGTGGGTTTTTTTATGACGGTTTGTTTCCTGTAAGCTTTTTGCTTTGGTCTTACTGATCCTCCCAGGTGTCATTCAACTGAAGAATTTTGTGTATTGGCATGGGTTGATTGTTCCTTTGTGATTGACTCTAGCTTGTATGTGTTGTTCATTTAAGATTGGGCTATTGGTGGACGTCCTTTCTCATTGCCAGGACATCGGTGCACTGAGTTTTTGCTTCTTCAAGACATGGTTTTGGGCGCATTGCTGGGTTTGTGGAAAATTGGAAATAGAATCTTTCTAGGCTATGGTGGTTCAAATTATAGATGGATGTGGGTTTTACATGTACTAACGCTGGACGTGTGTTCATTGCAAGTAGCCATGGTTTTGCTATCTTTTTGCTTCTGTTAAAATTTCGCATGATGTGGGTGGTGGTAACATATGGAACCTGCACAGGCAGTTAACATCAGAACTTTCTCTCTTCTCTGCATCTTTGCACATTCTTTTGCTCTGTTCTCAGAGAGGAGATGCCAACATTGAATGGCAATGGTTGTCAATTTTTTTGGTTGGTCCTTTTGCAGTTGTATCAGAGAAAATCTTTGGAGATATATGGTTGTTGTACTTCGAGTAGTTTTCCTATGCAACATGTTACTTTTCTTAATATCTTATGAACCCACTCCCTTTTTTATTTCAGGATATAGAATGCATGCAGGTTCAGTTTCTCCCACACGTCGTCGGGATGATCATAGATATATTTCTGATTTTGATCATTCTAGTGGTCTCACACGGGGCCGTGAATTTGGTGGTGGGAGGGATCTTGGTAGGTATCGAGATACTTCGCCTCATTACAGTCGAAGAGTAAGTGGTGGCAGGCCATTTGGGAGAGGTTTCGATGGCCCTGGACATGCTCCTGGGCCATTTAGAGGGGAACGTAGTAAAAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTCAGATCCTTTGTAAGTACTAATCTAGCACCACAATTTGATATATATATATATAGCAATGGATTTACTTCTGTTTTGTACAGATAAACCTTAGCTGATAACCATGCCATTACACCTTTTAGATATATTAATTAGAAATTTAACCGTTGCATGGAATAGGATCCTTTCTATTGATGTATTTTGGTTGGTTTAATTCTTTTTTTTTTTTTTTTTTTTTCACGTCGTGGATTCTATATCATTTGTTTATTTTGTTTTTATTTTTTAAACGTAACTCTGAGGTTGTTTTTCCTATAAGAATTCTGTCATGCATATTACTTTTATGGATTTAAAAAAGAGAGCATATTTCTTTTATGGATTTAAAAAAGAGAGCATATTTCTTTTATGGATTTGGCTGTAGTGGTTGTATCGAATGAAACATGATTCATCAGAGAAGCTCGAATGTGTGTGCCAATCTTTTATTTTAATGCATAGCTTACTGTACATTCTTACATTACATTGCTTCATGGTGCTATTCTTTTCTCAAACCAGTTTATTCTTATTCTTCATTAGATGTGACAACTTAAACTTTGCAAGACGAGAATTTTGTAACAACTGCAACAGACCCCGCACTGGAGCTGGTGGAAGTCCTCGAAGAGGAGGCTATGTTGGCCCACCATCCCTGCATTCTCCTCCTAGACGCTTTGCTGCCCACCCAATTGAACGTTCTCCTGGCAGGACTGTTAATGAATATAGGTCACCTCCCCGTGGTTGGGCCAGGGATGGTCCTAGGGAGATTGCAGCTGGTGGTCTGGCACCTCCGAGGTATGAAAGCAGGTATTCCGATCATCACCTGCGGAGAGATAGGGTTGATTATCTAGAAGACAGCTTCAGAGGAAGATCCAAGTTCGATAGGCTACCTCCTTCAGATTGGTCCCTTAGAGACAATGGAAGGGATGACTTCATCAACGAGAGGAAGGGATTTGAAAGAAGGCCACTATCACCAAAGGGATTTGAAAGAAGGCCGCTATCACCAAAGGGATTTGAAAGAAGGCCGCTATCACCACCACCACTGTCATTGCTTCCTCAGCGTGGGCGATGGGCTCGCGACGTTAGAGAAAGGAGCCGTTCCCCAATCAGAGGTCCAGTCAGATCACCATTGAGAGTCCCTCTTCGGTCTCCATTAAGCGGTGGCCTTCCACCAAAAGACTATCGCAGAGATGTTTTTGTTGAAAGGGAGCGTGACGACAGGCGTGGCCTAGGACGAGATCGCGATGGAGGCCCATTTTAG

mRNA sequence

ATGGGTTCCAGGGGTAAAGACTCTACGACTCACCATCAGCCGTTATTGAGCAGTCTTGTTGTCCGGCCTTCAAATAGTGACGGGGGTGGTGGTGGAGTCGGTGGAACCAGTGGCGGCCGCGTTGGTCGTGGAAGCGATTATGAGGCGGGTGAGCTTTGTGTTGCCGCCTGCAAGAACTTAGATCTTGAGGAGGGCTTTGGTTGTATCAGAGAAAATCTTTGGAGATATATGGTTGTTGTACTTCGAGTAGTTTTCCTATGCAACATGTTACTTTTCTTAATATCTTATGAACCCACTCCCTTTTTTATTTCAGGATATAGAATGCATGCAGGTTCAGTTTCTCCCACACGTCGTCGGGATGATCATAGATATATTTCTGATTTTGATCATTCTAGTGGTCTCACACGGGGCCGTGAATTTGGTGGTGGGAGGGATCTTGGTAGGTATCGAGATACTTCGCCTCATTACAGTCGAAGAGTAAGTGGTGGCAGGCCATTTGGGAGAGGTTTCGATGGCCCTGGACATGCTCCTGGGCCATTTAGAGGGGAACGTAGTAAAAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTCAGATCCTTTATGTGACAACTTAAACTTTGCAAGACGAGAATTTTGTAACAACTGCAACAGACCCCGCACTGGAGCTGGTGGAAGTCCTCGAAGAGGAGGCTATGTTGGCCCACCATCCCTGCATTCTCCTCCTAGACGCTTTGCTGCCCACCCAATTGAACGTTCTCCTGGCAGGACTGTTAATGAATATAGGTCACCTCCCCGTGGTTGGGCCAGGGATGGTCCTAGGGAGATTGCAGCTGGTGGTCTGGCACCTCCGAGGTATGAAAGCAGGTATTCCGATCATCACCTGCGGAGAGATAGGGTTGATTATCTAGAAGACAGCTTCAGAGGAAGATCCAAGTTCGATAGGCTACCTCCTTCAGATTGGTCCCTTAGAGACAATGGAAGGGATGACTTCATCAACGAGAGGAAGGGATTTGAAAGAAGGCCACTATCACCAAAGGGATTTGAAAGAAGGCCGCTATCACCAAAGGGATTTGAAAGAAGGCCGCTATCACCACCACCACTGTCATTGCTTCCTCAGCGTGGGCGATGGGCTCGCGACGTTAGAGAAAGGAGCCGTTCCCCAATCAGAGGTCCAGTCAGATCACCATTGAGAGTCCCTCTTCGGTCTCCATTAAGCGGTGGCCTTCCACCAAAAGACTATCGCAGAGATGTTTTTGTTGAAAGGGAGCGTGACGACAGGCGTGGCCTAGGACGAGATCGCGATGGAGGCCCATTTTAG

Coding sequence (CDS)

ATGGGTTCCAGGGGTAAAGACTCTACGACTCACCATCAGCCGTTATTGAGCAGTCTTGTTGTCCGGCCTTCAAATAGTGACGGGGGTGGTGGTGGAGTCGGTGGAACCAGTGGCGGCCGCGTTGGTCGTGGAAGCGATTATGAGGCGGGTGAGCTTTGTGTTGCCGCCTGCAAGAACTTAGATCTTGAGGAGGGCTTTGGTTGTATCAGAGAAAATCTTTGGAGATATATGGTTGTTGTACTTCGAGTAGTTTTCCTATGCAACATGTTACTTTTCTTAATATCTTATGAACCCACTCCCTTTTTTATTTCAGGATATAGAATGCATGCAGGTTCAGTTTCTCCCACACGTCGTCGGGATGATCATAGATATATTTCTGATTTTGATCATTCTAGTGGTCTCACACGGGGCCGTGAATTTGGTGGTGGGAGGGATCTTGGTAGGTATCGAGATACTTCGCCTCATTACAGTCGAAGAGTAAGTGGTGGCAGGCCATTTGGGAGAGGTTTCGATGGCCCTGGACATGCTCCTGGGCCATTTAGAGGGGAACGTAGTAAAAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTCAGATCCTTTATGTGACAACTTAAACTTTGCAAGACGAGAATTTTGTAACAACTGCAACAGACCCCGCACTGGAGCTGGTGGAAGTCCTCGAAGAGGAGGCTATGTTGGCCCACCATCCCTGCATTCTCCTCCTAGACGCTTTGCTGCCCACCCAATTGAACGTTCTCCTGGCAGGACTGTTAATGAATATAGGTCACCTCCCCGTGGTTGGGCCAGGGATGGTCCTAGGGAGATTGCAGCTGGTGGTCTGGCACCTCCGAGGTATGAAAGCAGGTATTCCGATCATCACCTGCGGAGAGATAGGGTTGATTATCTAGAAGACAGCTTCAGAGGAAGATCCAAGTTCGATAGGCTACCTCCTTCAGATTGGTCCCTTAGAGACAATGGAAGGGATGACTTCATCAACGAGAGGAAGGGATTTGAAAGAAGGCCACTATCACCAAAGGGATTTGAAAGAAGGCCGCTATCACCAAAGGGATTTGAAAGAAGGCCGCTATCACCACCACCACTGTCATTGCTTCCTCAGCGTGGGCGATGGGCTCGCGACGTTAGAGAAAGGAGCCGTTCCCCAATCAGAGGTCCAGTCAGATCACCATTGAGAGTCCCTCTTCGGTCTCCATTAAGCGGTGGCCTTCCACCAAAAGACTATCGCAGAGATGTTTTTGTTGAAAGGGAGCGTGACGACAGGCGTGGCCTAGGACGAGATCGCGATGGAGGCCCATTTTAG

Protein sequence

MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELCVAACKNLDLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKGFERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRDVFVERERDDRRGLGRDRDGGPF

Homology

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BLAST of Carg09841 vs. NCBI nr
Match: XP_022961317.1 (uncharacterized protein LOC111461847 isoform X4 [Cucurbita moschata] >XP_022961318.1 uncharacterized protein LOC111461847 isoform X4 [Cucurbita moschata])

HSP 1 Score: 664.5 bits (1713), Expect = 2.6e-187
Identity = 375/385 (97.40%), Postives = 375/385 (97.40%), Query Frame = 0


Query: 68  CIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISD 127
           CIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISD
Sbjct: 15  CIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISD 74

Query: 128 FDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKN 187
           FDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKN
Sbjct: 75  FDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKN 134

Query: 188 NPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRR 247
           NPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRR
Sbjct: 135 NPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRR 194

Query: 248 FAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLE 307
           FAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLE
Sbjct: 195 FAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLE 254

Query: 308 DSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLS----------XXXXXXXXXX 367
           DSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLS          XXXXXXXXXX
Sbjct: 255 DSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSXXXXXXXXXXXXXXXXXXXX 314

Query: 368 XXXXXXXXXXXXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDY 427
           XXXXXXXXXXXXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDY
Sbjct: 315 XXXXXXXXXXXXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDY 374

Query: 428 RRDVFVERERDDRRGLGRDRDGGPF 443
           RRDVFVERERDDRRGLGRDRDGGPF
Sbjct: 375 RRDVFVERERDDRRGLGRDRDGGPF 399

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BLAST of Carg09841 vs. NCBI nr
Match: XP_023515885.1 (uncharacterized protein LOC111779923 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023515886.1 uncharacterized protein LOC111779923 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 663.3 bits (1710), Expect = 5.7e-187
Identity = 370/375 (98.67%), Postives = 373/375 (99.47%), Query Frame = 0


Query: 68  CIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISD 127
           CIRENLWRYMVVVLRVVFLCN+LLF ISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISD
Sbjct: 15  CIRENLWRYMVVVLRVVFLCNLLLFSISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISD 74

Query: 128 FDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKN 187
           FDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKN
Sbjct: 75  FDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKN 134

Query: 188 NPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRR 247
           NPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRR
Sbjct: 135 NPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRR 194

Query: 248 FAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLE 307
           FAAHPIERSPGRT+NE RSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLE
Sbjct: 195 FAAHPIERSPGRTLNECRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLE 254

Query: 308 DSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSXXXXXXXXXXXXXXXXXXXX 367
           DSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSXXXXXXXXXXXXXXXXXXXX
Sbjct: 255 DSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSXXXXXXXXXXXXXXXXXXXX 314

Query: 368 XXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDYRRDVFVERER 427
           XXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDYRRDV+VERER
Sbjct: 315 XXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDYRRDVYVERER 374

Query: 428 DDRRGLGRDRDGGPF 443
           DDRRGLGRDRDGGPF
Sbjct: 375 DDRRGLGRDRDGGPF 389

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BLAST of Carg09841 vs. NCBI nr
Match: XP_022987740.1 (uncharacterized protein LOC111485202 isoform X2 [Cucurbita maxima] >XP_022987741.1 uncharacterized protein LOC111485202 isoform X2 [Cucurbita maxima])

HSP 1 Score: 622.1 bits (1603), Expect = 1.5e-174
Identity = 348/351 (99.15%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 92  FLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISDFDHSSGLTRGREFGGGRDLGRYRD 151
           FLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISDFDHSSGLTRGREFGGGRDLGRYRD
Sbjct: 39  FLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISDFDHSSGLTRGREFGGGRDLGRYRD 98

Query: 152 TSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFA 211
           TSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFA
Sbjct: 99  TSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFA 158

Query: 212 RREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRTVNEYRSPPRGW 271
           RREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRT+NEYRSPPRGW
Sbjct: 159 RREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRTLNEYRSPPRGW 218

Query: 272 ARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLEDSFRGRSKFDRLPPSDWSLRDNGR 331
           ARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDY+EDSFRGRSKFDRLPPSDWSLRDNGR
Sbjct: 219 ARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYVEDSFRGRSKFDRLPPSDWSLRDNGR 278

Query: 332 DDFINERKGFERRPLSXXXXXXXXXXXXXXXXXXXXXXXXSLLPQRGRWARDVRERSXXX 391
           DDFINERKGFERRPLSXXXXXXXXXXXXXXXXXXXXXXXXSLLPQRGRWARDVRERSXXX
Sbjct: 279 DDFINERKGFERRPLSXXXXXXXXXXXXXXXXXXXXXXXXSLLPQRGRWARDVRERSXXX 338

Query: 392 XXXXXXXXXXXXXXXXXXXXLPPKDYRRDVFVERERDDRRGLGRDRDGGPF 443
           XXXXXXXXXXXXXXXXXXXXLPPKDYRRDV+VERERDDRRGLGRDRDGGPF
Sbjct: 339 XXXXXXXXXXXXXXXXXXXXLPPKDYRRDVYVERERDDRRGLGRDRDGGPF 389

[Close]

BLAST of Carg09841 vs. NCBI nr
Match: XP_022961315.1 (uncharacterized protein LOC111461847 isoform X2 [Cucurbita moschata])

HSP 1 Score: 607.1 bits (1564), Expect = 4.9e-170
Identity = 392/442 (88.69%), Postives = 396/442 (89.59%), Query Frame = 0


Query: 1   MGSRGKDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRGSDYEAGELCVAACKNL 60
           MGSRGKDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRGSDYEAGE+     +  
Sbjct: 1   MGSRGKDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD 120
            L+           RY   +                        GYRMHAGSVSPTRRRD
Sbjct: 61  RLD-----------RYSDDL------------------------GYRMHAGSVSPTRRRD 120

Query: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180
           DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF
Sbjct: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180

Query: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240
           RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS
Sbjct: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240

Query: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300
           LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR
Sbjct: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300

Query: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSXXXXXXXXXXXXX 360
           DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSXXXXXXXXXXXXX
Sbjct: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDYRRD 420
           XXXXXXXXXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDYRRD
Sbjct: 361 XXXXXXXXXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDYRRD 407

Query: 421 VFVERERDDRRGLGRDRDGGPF 443
           VFVERERDDRRGLGRDRDGGPF
Sbjct: 421 VFVERERDDRRGLGRDRDGGPF 407

[Close]

BLAST of Carg09841 vs. NCBI nr
Match: XP_022961316.1 (uncharacterized protein LOC111461847 isoform X3 [Cucurbita moschata])

HSP 1 Score: 607.1 bits (1564), Expect = 4.9e-170
Identity = 392/442 (88.69%), Postives = 396/442 (89.59%), Query Frame = 0


Query: 1   MGSRGKDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRGSDYEAGELCVAACKNL 60
           MGSRGKDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRGSDYEAGE+     +  
Sbjct: 1   MGSRGKDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD 120
            L+           RY   +                        GYRMHAGSVSPTRRRD
Sbjct: 61  RLD-----------RYSDDL------------------------GYRMHAGSVSPTRRRD 120

Query: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180
           DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF
Sbjct: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180

Query: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240
           RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS
Sbjct: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240

Query: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300
           LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR
Sbjct: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300

Query: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSXXXXXXXXXXXXX 360
           DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSXXXXXXXXXXXXX
Sbjct: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDYRRD 420
           XXXXXXXXXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDYRRD
Sbjct: 361 XXXXXXXXXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDYRRD 407

Query: 421 VFVERERDDRRGLGRDRDGGPF 443
           VFVERERDDRRGLGRDRDGGPF
Sbjct: 421 VFVERERDDRRGLGRDRDGGPF 407

[Close]

BLAST of Carg09841 vs. TAIR10
Match: AT4G28990.2 (RNA-binding protein-related)

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-33
Identity = 98/234 (41.88%), Postives = 117/234 (50.00%), Query Frame = 0


Query: 105 GYRMHAGSVSPTRR-RDDHRYISDFDHSSGLTRGREFGGGRDL-GRYRDTSPHYSRRVSG 164
           G+R  A S SP RR  +DH++ SD +HS    RGRE    R+  GR+RD SP  +R  +G
Sbjct: 112 GHRTRASSSSPGRRGYEDHKHGSDLNHSGVPPRGRELSSRREAPGRHRDYSPPLARGGAG 171

Query: 165 GRPFGRGFDGPGHAPGPFRGERSKNN-PNVRPRDGDWYCSDPLCDNLNFARREFCNNCNR 224
            RP+ RG DGP   P   R   S+NN   V+PR+GDWYC DPLC NLNFARRE C  C R
Sbjct: 172 ARPYRRGLDGP--EPPHGRDGMSRNNISKVQPREGDWYCLDPLCRNLNFARRESCYKCKR 231

Query: 225 PRTGAGGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAA 284
            R     SP     + PP  HSP R F             N YRSPPRGW RD P     
Sbjct: 232 HRYAPANSPPLPRLLPPPMNHSPRRDF-------------NGYRSPPRGWPRDYP----- 291

Query: 285 GGLAPPRYE-----------SRYSDHHL---RRDRVDYLEDSFRGRSKFDRLPP 322
               PPR++             YSDH     RR   D+       +  +DR PP
Sbjct: 292 ----PPRHDHPTWRDRERDRPHYSDHEYPPSRRIASDWAHTEPLPKPHYDRRPP 321

[Close]

BLAST of Carg09841 vs. Swiss-Prot
Match: sp|Q92804|RBP56_HUMAN (TATA-binding protein-associated factor 2N OS=Homo sapiens OX=9606 GN=TAF15 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.8e-05
Identity = 18/30 (60.00%), Postives = 21/30 (70.00%), Query Frame = 0


Query: 194 RDGDWYCSDPLCDNLNFARREFCNNCNRPR 224
           + GDW C +P C N+NFARR  CN CN PR
Sbjct: 354 KSGDWVCPNPSCGNMNFARRNSCNQCNEPR 383

[Close]

BLAST of Carg09841 vs. Swiss-Prot
Match: sp|Q5ZLX5|ZRAB2_CHICK (Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.8e-05
Identity = 22/45 (48.89%), Postives = 25/45 (55.56%), Query Frame = 0


Query: 190 NVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGG 235
           N R  DGDW C D  C N+NFARR  CN C R +T      + GG
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGG 49

[Close]

BLAST of Carg09841 vs. Swiss-Prot
Match: sp|O95218|ZRAB2_HUMAN (Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZRANB2 PE=1 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 5.8e-05
Identity = 22/45 (48.89%), Postives = 25/45 (55.56%), Query Frame = 0


Query: 190 NVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGG 235
           N R  DGDW C D  C N+NFARR  CN C R +T      + GG
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGG 49

[Close]

BLAST of Carg09841 vs. Swiss-Prot
Match: sp|Q9R020|ZRAB2_MOUSE (Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 5.8e-05
Identity = 22/45 (48.89%), Postives = 25/45 (55.56%), Query Frame = 0


Query: 190 NVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGG 235
           N R  DGDW C D  C N+NFARR  CN C R +T      + GG
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGG 49

[Close]

BLAST of Carg09841 vs. Swiss-Prot
Match: sp|Q19QU3|ZRAB2_PIG (Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.8e-05
Identity = 22/45 (48.89%), Postives = 25/45 (55.56%), Query Frame = 0


Query: 190 NVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGG 235
           N R  DGDW C D  C N+NFARR  CN C R +T      + GG
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGG 49

[Close]

BLAST of Carg09841 vs. TrEMBL
Match: tr|A0A0A0M3K7|A0A0A0M3K7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G696450 PE=4 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 2.3e-152
Identity = 301/367 (82.02%), Postives = 316/367 (86.10%), Query Frame = 0


Query: 77  MVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISDFDHSSGLTR 136
           MVV+L ++FL   L+FLISYEPT FFISGYR+HAGSVSP RRRD HRY+S+FDHS GLTR
Sbjct: 1   MVVILGMIFL---LIFLISYEPTAFFISGYRIHAGSVSPPRRRDVHRYVSNFDHSEGLTR 60

Query: 137 GREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDG 196
           GREFGGGRDL RYRDTSPHY RRVSGGRPFGRG DGP  APGPFRGERSKNNPNVRPRDG
Sbjct: 61  GREFGGGRDLDRYRDTSPHYGRRVSGGRPFGRGVDGPRLAPGPFRGERSKNNPNVRPRDG 120

Query: 197 DWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRRFAAHPIERS 256
           DWYCSDPLCDNLNFARREFCNNCNRPRTG GGSPRR GY GPPSLHSPPRRFAAHPIERS
Sbjct: 121 DWYCSDPLCDNLNFARREFCNNCNRPRTGGGGSPRR-GYAGPPSLHSPPRRFAAHPIERS 180

Query: 257 PGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLEDSFRGRSKF 316
           PGRT+NEYRSPPR WARDG RE+AAGGLAPPRYESRYSD HLRRDRVDYLEDSFRGRSKF
Sbjct: 181 PGRTLNEYRSPPRSWARDGSREMAAGGLAPPRYESRYSD-HLRRDRVDYLEDSFRGRSKF 240

Query: 317 DR-LPPSDWSLRDNGRDDFINERKGFERRPLSXXXXXXXXXXXXXXXXXXXXXXXXSLLP 376
           DR LP +DW+LRDNGRDDFI ERKGFERRP S                         LLP
Sbjct: 241 DRPLPSADWALRDNGRDDFITERKGFERRPPS---------------------PPLPLLP 300

Query: 377 QRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDYRRDVFVERERDDRRGLGR 436
           QRGRW+RDVR+RS XXXXXXXXXXXXXXXXXXXXXX PPKD+RRDVF ERERDDRRGLGR
Sbjct: 301 QRGRWSRDVRDRSRXXXXXXXXXXXXXXXXXXXXXXXPPKDFRRDVFGERERDDRRGLGR 341

Query: 437 DRDGGPF 443
           DR+GGPF
Sbjct: 361 DREGGPF 341

[Close]

BLAST of Carg09841 vs. TrEMBL
Match: tr|A0A1S4E3W3|A0A1S4E3W3_CUCME (uncharacterized protein LOC103501026 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103501026 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 6.8e-152
Identity = 301/367 (82.02%), Postives = 315/367 (85.83%), Query Frame = 0


Query: 77  MVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISDFDHSSGLTR 136
           MVVVLR++FL   L+FLISYEPT FFISGYR+HAGSVSP RRRD HRYIS+F+HS GL R
Sbjct: 1   MVVVLRMIFL---LIFLISYEPTTFFISGYRIHAGSVSPARRRDVHRYISNFNHSDGLAR 60

Query: 137 GREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDG 196
           GREFGGGRDL RYRDTSPHY RRV GGRPFGRG DGP  APGPFRGERSKNNPNVRPRDG
Sbjct: 61  GREFGGGRDLDRYRDTSPHYGRRVGGGRPFGRGVDGPRLAPGPFRGERSKNNPNVRPRDG 120

Query: 197 DWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRRFAAHPIERS 256
           DWYCSDPLCDNLNFARREFCNNCNRPRTG GGSPRR GY GPPSLH+PPRRFAAHPIERS
Sbjct: 121 DWYCSDPLCDNLNFARREFCNNCNRPRTGGGGSPRR-GYAGPPSLHTPPRRFAAHPIERS 180

Query: 257 PGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLEDSFRGRSKF 316
           PGRT+NEYRSPPR WARDG RE+AAGGLAPPRYESRYSD HLRRDRVDYLEDSFRGRSKF
Sbjct: 181 PGRTLNEYRSPPRSWARDGSREMAAGGLAPPRYESRYSD-HLRRDRVDYLEDSFRGRSKF 240

Query: 317 DR-LPPSDWSLRDNGRDDFINERKGFERRPLSXXXXXXXXXXXXXXXXXXXXXXXXSLLP 376
           DR LP +DW+LRDNGRDDFI ERKGFERRP S                         LLP
Sbjct: 241 DRPLPSADWALRDNGRDDFITERKGFERRPPS---------------------PPLPLLP 300

Query: 377 QRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDYRRDVFVERERDDRRGLGR 436
           QRGRW+RDVRERS XXXXXXXXXXXXXXXXXXXXXX PPKD+RRDVF ERERDDRRGLGR
Sbjct: 301 QRGRWSRDVRERSRXXXXXXXXXXXXXXXXXXXXXXXPPKDFRRDVFGERERDDRRGLGR 341

Query: 437 DRDGGPF 443
           DR+GGPF
Sbjct: 361 DREGGPF 341

[Close]

BLAST of Carg09841 vs. TrEMBL
Match: tr|A0A1S3CHL9|A0A1S3CHL9_CUCME (uncharacterized protein LOC103501026 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501026 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 4.0e-144
Identity = 332/443 (74.94%), Postives = 348/443 (78.56%), Query Frame = 0


Query: 1   MGSRGKDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRGSDYEAGELCVAACKNL 60
           MGSR KDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRGSDYEAGE+     ++ 
Sbjct: 1   MGSRDKDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRGSDYEAGEV----PRDP 60

Query: 61  DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD 120
                 G   ++L                               GYR+HAGSVSP RRRD
Sbjct: 61  PQYSRLGRYSDDL-------------------------------GYRIHAGSVSPARRRD 120

Query: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180
            HRYIS+F+HS GL RGREFGGGRDL RYRDTSPHY RRV GGRPFGRG DGP  APGPF
Sbjct: 121 VHRYISNFNHSDGLARGREFGGGRDLDRYRDTSPHYGRRVGGGRPFGRGVDGPRLAPGPF 180

Query: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240
           RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTG GGSPRR GY GPPS
Sbjct: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGGGGSPRR-GYAGPPS 240

Query: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300
           LH+PPRRFAAHPIERSPGRT+NEYRSPPR WARDG RE+AAGGLAPPRYESRYSD HLRR
Sbjct: 241 LHTPPRRFAAHPIERSPGRTLNEYRSPPRSWARDGSREMAAGGLAPPRYESRYSD-HLRR 300

Query: 301 DRVDYLEDSFRGRSKFDR-LPPSDWSLRDNGRDDFINERKGFERRPLSXXXXXXXXXXXX 360
           DRVDYLEDSFRGRSKFDR LP +DW+LRDNGRDDFI ERKGFERRP S            
Sbjct: 301 DRVDYLEDSFRGRSKFDRPLPSADWALRDNGRDDFITERKGFERRPPS------------ 360

Query: 361 XXXXXXXXXXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXXXXXXXXXXXLPPKDYRR 420
                        LLPQRGRW+RDVRERS XXXXXXXXXXXXXXXXXXXXXX PPKD+RR
Sbjct: 361 ---------PPLPLLPQRGRWSRDVRERSRXXXXXXXXXXXXXXXXXXXXXXXPPKDFRR 385

Query: 421 DVFVERERDDRRGLGRDRDGGPF 443
           DVF ERERDDRRGLGRDR+GGPF
Sbjct: 421 DVFGERERDDRRGLGRDREGGPF 385

[Close]

BLAST of Carg09841 vs. TrEMBL
Match: tr|A0A1S3CHP1|A0A1S3CHP1_CUCME (uncharacterized protein LOC103501026 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501026 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 3.7e-142
Identity = 280/340 (82.35%), Postives = 292/340 (85.88%), Query Frame = 0


Query: 104 SGYRMHAGSVSPTRRRDDHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGG 163
           +GYR+HAGSVSP RRRD HRYIS+F+HS GL RGREFGGGRDL RYRDTSPHY RRV GG
Sbjct: 49  AGYRIHAGSVSPARRRDVHRYISNFNHSDGLARGREFGGGRDLDRYRDTSPHYGRRVGGG 108

Query: 164 RPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPR 223
           RPFGRG DGP  APGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPR
Sbjct: 109 RPFGRGVDGPRLAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPR 168

Query: 224 TGAGGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGG 283
           TG GGSPRR GY GPPSLH+PPRRFAAHPIERSPGRT+NEYRSPPR WARDG RE+AAGG
Sbjct: 169 TGGGGSPRR-GYAGPPSLHTPPRRFAAHPIERSPGRTLNEYRSPPRSWARDGSREMAAGG 228

Query: 284 LAPPRYESRYSDHHLRRDRVDYLEDSFRGRSKFDR-LPPSDWSLRDNGRDDFINERKGFE 343
           LAPPRYESRYSD HLRRDRVDYLEDSFRGRSKFDR LP +DW+LRDNGRDDFI ERKGFE
Sbjct: 229 LAPPRYESRYSD-HLRRDRVDYLEDSFRGRSKFDRPLPSADWALRDNGRDDFITERKGFE 288

Query: 344 RRPLSXXXXXXXXXXXXXXXXXXXXXXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXXX 403
           RRP S                         LLPQRGRW+RDVRERS XXXXXXXXXXXXX
Sbjct: 289 RRPPS---------------------PPLPLLPQRGRWSRDVRERSRXXXXXXXXXXXXX 348

Query: 404 XXXXXXXXXLPPKDYRRDVFVERERDDRRGLGRDRDGGPF 443
           XXXXXXXXX PPKD+RRDVF ERERDDRRGLGRDR+GGPF
Sbjct: 349 XXXXXXXXXXPPKDFRRDVFGERERDDRRGLGRDREGGPF 365

[Close]

BLAST of Carg09841 vs. TrEMBL
Match: tr|W9S109|W9S109_9ROSA (TATA-binding protein-associated factor 2N OS=Morus notabilis OX=981085 GN=L484_001933 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.1e-88
Identity = 195/341 (57.18%), Postives = 214/341 (62.76%), Query Frame = 0


Query: 104 SGYRMHAGSVSPTRRRD-DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSG 163
           SGYR+ AGS SP RRRD DHRY SDFDH   L R RE G  RD GR+RD SP Y+R    
Sbjct: 63  SGYRLRAGSTSPVRRRDSDHRYNSDFDHLRSLARSREVGAARDAGRFRDYSPPYARGRGS 122

Query: 164 GRPFGRGFDGPGHAPGPFRGE-RSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNR 223
           GRPFGRG DGP   PG FRGE  S+NNPNVRPR+GDWYC DPLC NLNFARR+ CNNC R
Sbjct: 123 GRPFGRGPDGPDFGPGLFRGEGMSRNNPNVRPREGDWYCPDPLCGNLNFARRDSCNNCKR 182

Query: 224 PRTGAGGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAA 283
            R G  GSPRR GY GPP                        YRSPPR W RDGP+E  A
Sbjct: 183 SRYGPVGSPRR-GYPGPPLPDVXXXXXXXXXXXXXXXXXXXXYRSPPRPWVRDGPKEFGA 242

Query: 284 GGLAPPRYESRYSDHHLRRDRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGF 343
           GGL PPR++ RY DHH+RRDR+DY +D +RGR+KFDR  P DW  RD GR+ FIN+RK F
Sbjct: 243 GGLPPPRHDGRYPDHHMRRDRLDYPDDHYRGRAKFDRPMPLDWGHRDRGRESFINDRKPF 302

Query: 344 ERRPLSXXXXXXXXXXXXXXXXXXXXXXXXSLLPQRGRWARDVRERSXXXXXXXXXXXXX 403
           E                 XXXXXXXXXXXX     RGRWARDVRERS             
Sbjct: 303 E-----------------XXXXXXXXXXXXXXXXNRGRWARDVRERSRSPLRRGP----- 362

Query: 404 XXXXXXXXXXLPPKDYRRDVFVERERDDRRGLGRDRDGGPF 443
                      PPKDYRRDV+VER RDDRRG+GRDR GG +
Sbjct: 363 -----------PPKDYRRDVYVERGRDDRRGMGRDRIGGTY 369

The following BLAST results are available for this feature:

BLAST of Carg09841 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961317.1	2.6e-187	97.40	uncharacterized protein LOC111461847 isoform X4 [Cucurbita moschata] >XP_0229613...	[more]
XP_023515885.1	5.7e-187	98.67	uncharacterized protein LOC111779923 isoform X2 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022987740.1	1.5e-174	99.15	uncharacterized protein LOC111485202 isoform X2 [Cucurbita maxima] >XP_022987741...	[more]
XP_022961315.1	4.9e-170	88.69	uncharacterized protein LOC111461847 isoform X2 [Cucurbita moschata]	[more]
XP_022961316.1	4.9e-170	88.69	uncharacterized protein LOC111461847 isoform X3 [Cucurbita moschata]	[more]

BLAST of Carg09841 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28990.2	1.8e-33	41.88	RNA-binding protein-related	[more]

BLAST of Carg09841 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q92804\|RBP56_HUMAN	5.8e-05	60.00	TATA-binding protein-associated factor 2N OS=Homo sapiens OX=9606 GN=TAF15 PE=1 ...	[more]
sp\|Q5ZLX5\|ZRAB2_CHICK	5.8e-05	48.89	Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=...	[more]
sp\|O95218\|ZRAB2_HUMAN	5.8e-05	48.89	Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=Z...	[more]
sp\|Q9R020\|ZRAB2_MOUSE	5.8e-05	48.89	Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=...	[more]
sp\|Q19QU3\|ZRAB2_PIG	5.8e-05	48.89	Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRA...	[more]

BLAST of Carg09841 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M3K7\|A0A0A0M3K7_CUCSA	2.3e-152	82.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G696450 PE=4 SV=1	[more]
tr\|A0A1S4E3W3\|A0A1S4E3W3_CUCME	6.8e-152	82.02	uncharacterized protein LOC103501026 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CHL9\|A0A1S3CHL9_CUCME	4.0e-144	74.94	uncharacterized protein LOC103501026 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CHP1\|A0A1S3CHP1_CUCME	3.7e-142	82.35	uncharacterized protein LOC103501026 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|W9S109\|W9S109_9ROSA	3.1e-88	57.18	TATA-binding protein-associated factor 2N OS=Morus notabilis OX=981085 GN=L484_0...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036443	Znf_RanBP2_sf
IPR034870	TET_fam
IPR001876	Znf_RanBP2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09841-RA	Carg09841-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 196..222 e-value: 8.1E-4 score: 28.7
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 198..219
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 194..225 score: 9.552
None	No IPR available	GENE3D	G3DSA:4.10.1060.10		coord: 185..226 e-value: 1.3E-12 score: 48.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..442
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 417..442
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..360
None	No IPR available	PANTHER	PTHR23238:SF26	GH13594P-RELATED	coord: 10..437
IPR034870	TAF15/EWS/TLS family	PANTHER	PTHR23238	RNA BINDING PROTEIN	coord: 10..437
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	SSF90209	Ran binding protein zinc finger-like	coord: 186..225

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09841	Cla010661	Watermelon (97103) v1	carwmB0127
Carg09841	MELO3C024688	Melon (DHL92) v3.5.1	carmeB0132
Carg09841	ClCG06G008760	Watermelon (Charleston Gray)	carwcgB0126
Carg09841	CmaCh10G006350	Cucurbita maxima (Rimu)	carcmaB0166
Carg09841	CmoCh10G006690	Cucurbita moschata (Rifu)	carcmoB0172
Carg09841	CmoCh11G006270	Cucurbita moschata (Rifu)	carcmoB0175
Carg09841	Lsi06G008560	Bottle gourd (USVL1VR-Ls)	carlsiB115
Carg09841	Cp4.1LG04g10230	Cucurbita pepo (Zucchini)	carcpeB0186
Carg09841	Cp4.1LG18g04220	Cucurbita pepo (Zucchini)	carcpeB0185
Carg09841	MELO3C024688.2	Melon (DHL92) v3.6.1	carmedB0136
Carg09841	Cla97C06G118510	Watermelon (97103) v2	carwmbB0134
Carg09841	Bhi02G000989	Wax gourd	carwgoB0163

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg09841	Carg12208	Silver-seed gourd	carcarB041

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09841	Silver-seed gourd	carcarB152
Carg09841	Silver-seed gourd	carcarB155
Carg09841	Silver-seed gourd	carcarB156
Carg09841	Silver-seed gourd	carcarB157
Carg09841	Cucumber (Gy14) v2	carcgybB0136
Carg09841	Cucumber (Gy14) v2	carcgybB0137
Carg09841	Cucumber (Gy14) v2	carcgybB0142
Carg09841	Cucumber (Gy14) v1	carcgyB0153
Carg09841	Cucumber (Gy14) v1	carcgyB0162
Carg09841	Cucurbita maxima (Rimu)	carcmaB0169
Carg09841	Cucurbita maxima (Rimu)	carcmaB0170
Carg09841	Cucurbita maxima (Rimu)	carcmaB0171
Carg09841	Cucurbita moschata (Rifu)	carcmoB0176
Carg09841	Cucurbita moschata (Rifu)	carcmoB0179
Carg09841	Cucurbita moschata (Rifu)	carcmoB0180
Carg09841	Cucurbita pepo (Zucchini)	carcpeB0182
Carg09841	Cucurbita pepo (Zucchini)	carcpeB0190
Carg09841	Cucurbita pepo (Zucchini)	carcpeB0181
Carg09841	Cucurbita pepo (Zucchini)	carcpeB0184
Carg09841	Wild cucumber (PI 183967)	carcpiB0143
Carg09841	Wild cucumber (PI 183967)	carcpiB0146
Carg09841	Cucumber (Chinese Long) v2	carcuB0143
Carg09841	Cucumber (Chinese Long) v2	carcuB0139
Carg09841	Cucumber (Chinese Long) v3	carcucB0146
Carg09841	Cucumber (Chinese Long) v3	carcucB0147
Carg09841	Cucumber (Chinese Long) v3	carcucB0151
Carg09841	Bottle gourd (USVL1VR-Ls)	carlsiB111
Carg09841	Bottle gourd (USVL1VR-Ls)	carlsiB114
Carg09841	Melon (DHL92) v3.5.1	carmeB0129
Carg09841	Melon (DHL92) v3.5.1	carmeB0131
Carg09841	Melon (DHL92) v3.5.1	carmeB0133
Carg09841	Melon (DHL92) v3.6.1	carmedB0134
Carg09841	Melon (DHL92) v3.6.1	carmedB0135
Carg09841	Melon (DHL92) v3.6.1	carmedB0137
Carg09841	Watermelon (Charleston Gray)	carwcgB0123
Carg09841	Watermelon (Charleston Gray)	carwcgB0124
Carg09841	Watermelon (97103) v1	carwmB0123
Carg09841	Watermelon (97103) v1	carwmB0125
Carg09841	Watermelon (97103) v2	carwmbB0137
Carg09841	Watermelon (97103) v2	carwmbB0131
Carg09841	Wax gourd	carwgoB0165
Carg09841	Wax gourd	carwgoB0162
Carg09841	Wax gourd	carwgoB0155