Carg09818 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09818
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Hydroxymethylglutaryl-CoA lyase
Location	Cucurbita_argyrosperma_scaffold_023 : 1115549 .. 1120450 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGATTTATCCACCTTTGATCTTGATCTTCATTCTTGTTTATTGCTTTAGGACGATGCAAGCTGCAAAGGTTTCTGCTAAATTGACTCGACGGGGTTTGTCTTGGCGCCATGGATATAATCCAACCATGAGAATTTCCAGCCGGTTTCTTAGTTCATCTTCGGCTTCGCATGTAGGCGTCAGCTCCACTAACGGGCTTGGCATACAAGGAGAAGTTGATAATTGCTGGTATGGATGAAATGATTGTTCTTCACAAGTTCGTAATCCAGTATGTATGATCTGATTATAGGGAGAATTAATCATACCTTTTGATGCTTTCGTTTTTTTTTATTAAATCGCTTATCGTTGCAATATCTTTTCGCTGAAAATGTGCGATAGAATTCTTTAAATCCTTATGGGGTGAGTCGTGGAATATGGATCGTGAAATTTGGGCGTTTTTCTTTTACGATTTTACGATGGGAAATCTACTTCGACGAATTTGGGGGAATCCGTTCAAGAGTGGAGCTAATAAGCTTTGGGTAAATGCAATCCAAACTATTATGTGGGTCTAGTTTGGAAGAAACAACATATTGTTCGGAGGGTACATGATTGGAGAGAATAATTTGATTAGTTTCAATCTTTGCTTAGCAATTAGGCCTTTGCAATTAATACAGATTAGGGCAGATTCTTGTCAGCTCTGGTGGGGAGTATGCTCTCTTGTATGATCACGGGTTGGTGTATTTATTTGTATAATGGGGCTTTGAAGTTCTAGTAACACGAAGAGGATTTAGACCACTTGTTTTGGGATTGTGATTTTATTACCTCTCTGTGGGATCAGTTTTTGCAAGACTTCTGGGGTTGCAAGCTCGTAACAGTGGGTGTTGTTCGATGTTTGAGGTGCTCTTGAACTCTCCTTTCCATGAAAAAGGAAGGGTTCTTCGGCTGCGGGGCATTTGGCTTGAGAGGAGCTCGAGTTTTTTGTGGGGTGGAGAGGTTTGGGGAGGATCTTTGGGATTTGATTAGATGTAATTCCTCTTTATGGGCAATATTTTTCTAATGCTGTTTACACAAATTAAGTTTGTACTTTGTAGTATTTATTGAAGATTTTCTTTAAGTCTCATGCTTAAGTTTGAATATAACACTGCATTTATGTCTCCACAGTCAACAAGATGGAGGAGATATAGTTCTTTCAAGAGAAAATAAGAGGAGATTGTCCCAGGTGAAGTTCTAAAATGGCAGTTCCTAGTGAAATATACTATAATTGAAAAACTGTAGCTCCGATAACTATCGATCTGTCTACGAAAAAAAATCAACAAAGGTGTTTCAAATTTTGAAATGACTTTTTTCCTTTGTACTGCCATTGAGTTCTCTTTCCAGTCAAGATCTGTCTCATATGATTTGAAACAAGTTTTATTTTGGGTACTGTGTTCTTAATCTTAACTATTTGCAATGTTATTTTCAATTATAATGGTTATTTAAAATATTCAGCGGTTTCTGTCTCTTATGAAAAAAAGGAGAATAATAAATATATTGAATTTGTCTGATGAACGAATTTTTTCTGCCTTTGCAGTATTTACGCCATATTCCGCAGTTTGTGAAGATTGTTGAAGTTGGTCCAAGAGATGGACTACAAAATGAAAAGCACATTGTACCAACTGCTGTTAAGGTTGAATTAATAAAGATGCTAGTCTCTTCTGGGTTGCGTGTTGTTGAAGCCACGAGTTTTGTTTCTCCTAAATGGGTACCTCAGGTAACTTGGCTTGATAGTCAATGAACATGTTGGTTGGTATATTTTTGTGTTCCTAAAACAATTACTTCAACTTTTCATGCACTCTGCCTTCATGTTTGAGTTTCTTGTAGATATACTAATTAACCTCGTTTCCATATTTTCCTCAGTTAGCAGATGCAAACGATGTTATGGAGGGAATTCGAAATGTTGAAGGTGCTCGATTTCCTGTGTTGACCCCAAATATTAAGGTATGAACTTCAGTACAGAAATATAAAGGTAGGACTAATCTGGAATGCATTTTGTGATTATTGATGAGATTTTTTGACTGCTTTGTATAGGGTTTTGAAGCGGCTGTTGCAGCTGGAGCAAAGGAAGTAGCTATCTTTGCTTCAGCATCCGAATCCTTCTCAAAGTCAAATATCAATTGCAGCATAGAAGAAAGTCTCCGTCGTTACCGTGAAGTTGCTGTTGCTGCAAGAAAGCACTCACTTCCAGTTCGCGGGTAGGTACTCTGAACCAGAAAACTGAGTTATTATATCATATCTGATATCTGGTTTGATTTCATATAAACATGTTAGATATGATTTGATACTCCCCTGGTTTGATATGATTTACTTTTTATATCTTGAAAATGTCTCCTATAAACATGTTAGATATGTATCATGTGTTGTGGGCTGTCCCATTGAAGGAATGGTGCCCCCATCAAATGTAGCATACGTCGCTAAGGAGCTTTACGGCATGGGATGCTCTGAAATTTCCCTTGGCGATACAATTGGTGTTGGTACTCCAGGTAACCTCTTGGAATAGCTTTAGTTTAAAATCACAGTGGATATGAACAGAATCTATCTTCGGAAGGCATTTGGACAAACCGAAGAAAGATTATATCGCACGTTAAATTAGGTATCTGTATGGTCTATGCCTCTCATTCTAAATTGGTTAACTTATATCATTCATTGCTAGCATGTTGTAAGTACTCCATTATAGGATTTCCTTTGTATATCTTTTGTAATATTAGTTCTGTATTATGTGTATATTTCATATTTATACCGGTGTCTTCTTTATTTATTAATGGTTTTTCTTCTTATATAAGAGGACCTTGTATCTCCATAGTTTCTTAATTAGAAGAGTTCCCATGGTGAACTCAATTTTTCCTAAACAATTTTTTAACGATGATTTTTTTAAATATTTGTTTTAAGAATCCTTTTTTGACAGTAATTTTTCTAACTCTTCCAGGAGTCATTGGCAACATTCATGTTCTTGTTAACTTTAGTTTTCTCACCTCTGCAGGAACCGTGATTCCAATGCTTGAATCTGTAGTTGATGTTGTTCCAATTGAAAATCTTGCTGTTCATTTCCATGACACTTATGGGCAAGCTCTGTCCAATATCCTACTCTCACTCCAGGTAAACTCTGTTTTTTCCATCTTGGTTTTAATTGGTTGGAACCTACTAGTTTCAAAAAAATATATGCCAATGAGTTGGTATTTATTCGCGAGTATCAAAGTATAATTTAGGGAAATCAGAGACCTTATCTCTCCTGCTCTACCTTGCACTTAGCGAGAATACTTGTTGTAATAGTCTAAGTCCATCGCTAGCAGATATTGTTCTTTTTGGGCTTTCCCTTTCGGGCTTCTCCTTAAGATTTTTAAAACGCGTCTACTAAGAAGAGATTTTCACACCCTTATAATGAATGTTTCGTTCTCCTCCCCAACCGACATGGGATCTCACTCTTATACCCAAACTCTTTCTGATGCCCTCTTTACTCCTAGGCAACCTACTCACATAACTAACTTGCAGTGGCCCACTGTCCTATTATTCACGAAATTCAATTTTATGTTTCATAGATCTTTTGTTGAAAAGTTCCGGGACAAGATTTTCAATTTAACCAATAATATACTAGTAACTGATGTGTCAAATAATGAAGAGGAGTAGGTACTAACAACTAAAAATTTTCTCCTTTCACTTACTTCCTCTCTTGGCTTCTAAGACTATGTTGAATTTGATTAAGAGAAAAATATGTATGAAGTACTTAATTACAACATATATATATATATATATATATATATATATATATATATATATATATATATATACGCGCACGTACATATATATCTAGTTTGTCAACTTAGAGAGCCCAAAAAGACAAAATGAAGACCGTGTTGTCCTAGAATTTTCAAACTTAGAACAACTAGATTTTCTTAAAGAAGCATTATTCTAAGTTGAGGGCTACCGTGCTAAGATTTCATTTGATTTTGGTTTTTGAAAACCAAGCTTATGATTTTTTTCACTCTATTTGATCAACTGTTGTAATGAAAACGAATCTGTTACATGCAATGATGTTGAAAACGATACAAAAGTTGAAGATGAAAATAAACAGCTTATCTTATTAACAGATGGGGATTGGCACGGTGGATTGTTCGGTTTCTGGTCTAGGGGGCTGCCCATATGCTAAAGGTGCTTCTGGAAACGTTGCAACTGAAGATGTTGTGTATATGCTGAATGGAATTGGAGTGAAGACCAACGTAGACCTTGAAAAGCTCGTGTTGGCTGGAGATTTCATCTCCAAGCACCTGGGGCGTCCTTCCGCTTCAAAAGTAGCAATTGCATTGCAGAAAGTTGCCTCCAAGCCCAATAAATGCACAGCTACTGCATCCAAATTATGAGGTACTTTACACTATATTCTTGCGTCTTCTCTGATATTGTTCCTCAAGACCCCTAGTAGCTTTCTTCTAAGTTTTAGGTGCTAAAGTATTTTATCATGTATGTTGCTCTCATATAACCCGAAACGAAAGCATTTATGAGTGAATAACCGAGCAACCTACAGAAAAAGGCCTCGAGTCGAGTAAAATAAGACCAAACACGTGAGCGGAATACGAGACGAGGCCAAACCTCAAAGGGGTCTCTCAAACCCTCTGAATAATATTGACACAACTTATCCTTCTGTTTAGGTGAAATGAACATTTCCTGTTCATCCTTATCAAGGGCAATGTCTGTGAAGAAAACTCTTGCTTTCAATACTTAGTAGCATCGTGAATGCACAGAATGAAGCGTCGAAGAGATGCACGGTCTCGATGGCAGATGGGCATATGAAGAAATAATGGAGCACGGTCTCGTTAGTGTATTGATGAAAACCATTTATCTACACCGATCACCACCCTCTTTCATTAAACTTTCTCATGTTTCAATCTACAGC

mRNA sequence

ATGTGGATTTATCCACCTTTGATCTTGATCTTCATTCTTGTTTATTGCTTTAGGACGATGCAAGCTGCAAAGGTTTCTGCTAAATTGACTCGACGGGGTTTGTCTTGGCGCCATGGATATAATCCAACCATGAGAATTTCCAGCCGGTTTCTTAGTTCATCTTCGGCTTCGCATGTAGGCGTCAGCTCCACTAACGGGCTTGGCATACAAGGAGAAGTTGATAATTGCTGTCAACAAGATGGAGGAGATATAGTTCTTTCAAGAGAAAATAAGAGGAGATTGTCCCAGTATTTACGCCATATTCCGCAGTTTGTGAAGATTGTTGAAGTTGGTCCAAGAGATGGACTACAAAATGAAAAGCACATTGTACCAACTGCTGTTAAGGTTGAATTAATAAAGATGCTAGTCTCTTCTGGGTTGCGTGTTGTTGAAGCCACGAGTTTTGTTTCTCCTAAATGGGTACCTCAGTTAGCAGATGCAAACGATGTTATGGAGGGAATTCGAAATGTTGAAGGTGCTCGATTTCCTGTGTTGACCCCAAATATTAAGGGTTTTGAAGCGGCTGTTGCAGCTGGAGCAAAGGAAGTAGCTATCTTTGCTTCAGCATCCGAATCCTTCTCAAAGTCAAATATCAATTGCAGCATAGAAGAAAGTCTCCGTCGTTACCGTGAAGTTGCTGTTGCTGCAAGAAAGCACTCACTTCCAGTTCGCGGATATGTATCATGTGTTGTGGGCTGTCCCATTGAAGGAATGGTGCCCCCATCAAATGTAGCATACGTCGCTAAGGAGCTTTACGGCATGGGATGCTCTGAAATTTCCCTTGGCGATACAATTGGTGTTGGTACTCCAGGAACCGTGATTCCAATGCTTGAATCTGTAGTTGATGTTGTTCCAATTGAAAATCTTGCTGTTCATTTCCATGACACTTATGGGCAAGCTCTGTCCAATATCCTACTCTCACTCCAGATGGGGATTGGCACGGTGGATTGTTCGGTTTCTGGTCTAGGGGGCTGCCCATATGCTAAAGGTGCTTCTGGAAACGTTGCAACTGAAGATGTTGTGTATATGCTGAATGGAATTGGAGTGAAGACCAACGTAGACCTTGAAAAGCTCGTGTTGGCTGGAGATTTCATCTCCAAGCACCTGGGGCGTCCTTCCGCTTCAAAAGTAGCAATTGCATTGCAGAAAGTTGCCTCCAAGCCCAATAAATGCACAGCTACTGCATCCAAATTATGAGGTACTTTACACTATATTCTTGCGTCTTCTCTGATATTGTTCCTCAAGACCCCTAGTAGCTTTCTTCTAAGTTTTAGGTGCTAAAGTATTTTATCATGTATGTTGCTCTCATATAACCCGAAACGAAAGCATTTATGAGTGAATAACCGAGCAACCTACAGAAAAAGGCCTCGAGTCGAGTAAAATAAGACCAAACACGTGAGCGGAATACGAGACGAGGCCAAACCTCAAAGGGGTCTCTCAAACCCTCTGAATAATATTGACACAACTTATCCTTCTGTTTAGGTGAAATGAACATTTCCTGTTCATCCTTATCAAGGGCAATGTCTGTGAAGAAAACTCTTGCTTTCAATACTTAGTAGCATCGTGAATGCACAGAATGAAGCGTCGAAGAGATGCACGGTCTCGATGGCAGATGGGCATATGAAGAAATAATGGAGCACGGTCTCGTTAGTGTATTGATGAAAACCATTTATCTACACCGATCACCACCCTCTTTCATTAAACTTTCTCATGTTTCAATCTACAGC

Coding sequence (CDS)

ATGTGGATTTATCCACCTTTGATCTTGATCTTCATTCTTGTTTATTGCTTTAGGACGATGCAAGCTGCAAAGGTTTCTGCTAAATTGACTCGACGGGGTTTGTCTTGGCGCCATGGATATAATCCAACCATGAGAATTTCCAGCCGGTTTCTTAGTTCATCTTCGGCTTCGCATGTAGGCGTCAGCTCCACTAACGGGCTTGGCATACAAGGAGAAGTTGATAATTGCTGTCAACAAGATGGAGGAGATATAGTTCTTTCAAGAGAAAATAAGAGGAGATTGTCCCAGTATTTACGCCATATTCCGCAGTTTGTGAAGATTGTTGAAGTTGGTCCAAGAGATGGACTACAAAATGAAAAGCACATTGTACCAACTGCTGTTAAGGTTGAATTAATAAAGATGCTAGTCTCTTCTGGGTTGCGTGTTGTTGAAGCCACGAGTTTTGTTTCTCCTAAATGGGTACCTCAGTTAGCAGATGCAAACGATGTTATGGAGGGAATTCGAAATGTTGAAGGTGCTCGATTTCCTGTGTTGACCCCAAATATTAAGGGTTTTGAAGCGGCTGTTGCAGCTGGAGCAAAGGAAGTAGCTATCTTTGCTTCAGCATCCGAATCCTTCTCAAAGTCAAATATCAATTGCAGCATAGAAGAAAGTCTCCGTCGTTACCGTGAAGTTGCTGTTGCTGCAAGAAAGCACTCACTTCCAGTTCGCGGATATGTATCATGTGTTGTGGGCTGTCCCATTGAAGGAATGGTGCCCCCATCAAATGTAGCATACGTCGCTAAGGAGCTTTACGGCATGGGATGCTCTGAAATTTCCCTTGGCGATACAATTGGTGTTGGTACTCCAGGAACCGTGATTCCAATGCTTGAATCTGTAGTTGATGTTGTTCCAATTGAAAATCTTGCTGTTCATTTCCATGACACTTATGGGCAAGCTCTGTCCAATATCCTACTCTCACTCCAGATGGGGATTGGCACGGTGGATTGTTCGGTTTCTGGTCTAGGGGGCTGCCCATATGCTAAAGGTGCTTCTGGAAACGTTGCAACTGAAGATGTTGTGTATATGCTGAATGGAATTGGAGTGAAGACCAACGTAGACCTTGAAAAGCTCGTGTTGGCTGGAGATTTCATCTCCAAGCACCTGGGGCGTCCTTCCGCTTCAAAAGTAGCAATTGCATTGCAGAAAGTTGCCTCCAAGCCCAATAAATGCACAGCTACTGCATCCAAATTATGA

Protein sequence

MWIYPPLILIFILVYCFRTMQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQGEVDNCCQQDGGDIVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSGLRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIFASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAYVAKELYGMGCSEISLGDTIGVGTPGTVIPMLESVVDVVPIENLAVHFHDTYGQALSNILLSLQMGIGTVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFISKHLGRPSASKVAIALQKVASKPNKCTATASKL

Homology

[Close]

BLAST of Carg09818 vs. NCBI nr
Match: XP_022934490.1 (hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 689.1 bits (1777), Expect = 9.1e-195
Identity = 390/392 (99.49%), Postives = 392/392 (100.00%), Query Frame = 0


Query: 20  MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQGEVDNCCQQ 79
           MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQGEVDNCCQQ
Sbjct: 1   MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQGEVDNCCQQ 60

Query: 80  DGGDIVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSG 139
           DGGD+VLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSG
Sbjct: 61  DGGDVVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSG 120

Query: 140 LRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIF 199
           LRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIF
Sbjct: 121 LRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIF 180

Query: 200 ASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAY 259
           ASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAY
Sbjct: 181 ASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAY 240

Query: 260 VAKELYGMGCSEISLGDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXX 319
           VAKELYGMGCSEISLGDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 VAKELYGMGCSEISLGDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 320 XXXXXXXXVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFIS 379
           XXXXXXXXVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKL+LAGDFIS
Sbjct: 301 XXXXXXXXVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLMLAGDFIS 360

Query: 380 KHLGRPSASKVAIALQKVASKPNKCTATASKL 412
           KHLGRPSASKVAIALQKVASKPNKCTATASKL
Sbjct: 361 KHLGRPSASKVAIALQKVASKPNKCTATASKL 392

[Close]

BLAST of Carg09818 vs. NCBI nr
Match: XP_023526450.1 (hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526451.1 hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 683.7 bits (1763), Expect = 3.8e-193
Identity = 356/392 (90.82%), Postives = 359/392 (91.58%), Query Frame = 0


Query: 20  MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQGEVDNCCQQ 79
           MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGV+STNGLGIQGEVDNCCQQ
Sbjct: 1   MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVTSTNGLGIQGEVDNCCQQ 60

Query: 80  DGGDIVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSG 139
           DGGD VLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSG
Sbjct: 61  DGGDAVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSG 120

Query: 140 LRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIF 199
           LR+VEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIF
Sbjct: 121 LRIVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIF 180

Query: 200 ASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAY 259
           ASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAY
Sbjct: 181 ASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAY 240

Query: 260 VAKELYGMGCSEISLGDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXX 319
           VAKELY MGCSEISLGDTIGVGTPGTVIPMLESVVDV                       
Sbjct: 241 VAKELYSMGCSEISLGDTIGVGTPGTVIPMLESVVDVVPIENLAVHFHDTYGQALSNILL 300

Query: 320 XXXXXXXXVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFIS 379
                   VDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKL+LAGDFIS
Sbjct: 301 SLQMGIGTVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLMLAGDFIS 360

Query: 380 KHLGRPSASKVAIALQKVASKPNKCTATASKL 412
           KHLGRPSASKVAIALQKVASKPNKCTATASKL
Sbjct: 361 KHLGRPSASKVAIALQKVASKPNKCTATASKL 392

[Close]

BLAST of Carg09818 vs. NCBI nr
Match: XP_022983793.1 (hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 679.1 bits (1751), Expect = 9.4e-192
Identity = 355/392 (90.56%), Postives = 357/392 (91.07%), Query Frame = 0


Query: 20  MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQGEVDNCCQQ 79
           MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQGEV NCCQQ
Sbjct: 2   MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQGEVHNCCQQ 61

Query: 80  DGGDIVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSG 139
           DGGD VLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSG
Sbjct: 62  DGGDAVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSG 121

Query: 140 LRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIF 199
           LR+VEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIF
Sbjct: 122 LRIVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIF 181

Query: 200 ASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAY 259
           ASASESFSKSNINCSIEESLRRYREVAVAARK SLPVRGYVSCVVGCPIEGMVPPSNVAY
Sbjct: 182 ASASESFSKSNINCSIEESLRRYREVAVAARKQSLPVRGYVSCVVGCPIEGMVPPSNVAY 241

Query: 260 VAKELYGMGCSEISLGDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXX 319
           VAKELY MGCSEISLGDTIGVGTPGTVIPMLESVVDV                       
Sbjct: 242 VAKELYSMGCSEISLGDTIGVGTPGTVIPMLESVVDVVPIENLAVHFHDTYGQALSNILL 301

Query: 320 XXXXXXXXVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFIS 379
                   VDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKL+LAGDFIS
Sbjct: 302 SLQMGIGTVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLMLAGDFIS 361

Query: 380 KHLGRPSASKVAIALQKVASKPNKCTATASKL 412
           KHLGRPSASKVAIALQKVASKPNKCTATASKL
Sbjct: 362 KHLGRPSASKVAIALQKVASKPNKCTATASKL 393

[Close]

BLAST of Carg09818 vs. NCBI nr
Match: XP_022934491.1 (hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 575.5 bits (1482), Expect = 1.5e-160
Identity = 332/334 (99.40%), Postives = 334/334 (100.00%), Query Frame = 0


Query: 78  QQDGGDIVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVS 137
           QQDGGD+VLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVS
Sbjct: 14  QQDGGDVVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVS 73

Query: 138 SGLRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVA 197
           SGLRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVA
Sbjct: 74  SGLRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVA 133

Query: 198 IFASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNV 257
           IFASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNV
Sbjct: 134 IFASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNV 193

Query: 258 AYVAKELYGMGCSEISLGDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXX 317
           AYVAKELYGMGCSEISLGDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXX
Sbjct: 194 AYVAKELYGMGCSEISLGDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXX 253

Query: 318 XXXXXXXXXXVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDF 377
           XXXXXXXXXXVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKL+LAGDF
Sbjct: 254 XXXXXXXXXXVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLMLAGDF 313

Query: 378 ISKHLGRPSASKVAIALQKVASKPNKCTATASKL 412
           ISKHLGRPSASKVAIALQKVASKPNKCTATASKL
Sbjct: 314 ISKHLGRPSASKVAIALQKVASKPNKCTATASKL 347

[Close]

BLAST of Carg09818 vs. NCBI nr
Match: XP_023526452.1 (hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 571.2 bits (1471), Expect = 2.8e-159
Identity = 299/334 (89.52%), Postives = 301/334 (90.12%), Query Frame = 0


Query: 78  QQDGGDIVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVS 137
           QQDGGD VLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVS
Sbjct: 14  QQDGGDAVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVS 73

Query: 138 SGLRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVA 197
           SGLR+VEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVA
Sbjct: 74  SGLRIVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVA 133

Query: 198 IFASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNV 257
           IFASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNV
Sbjct: 134 IFASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNV 193

Query: 258 AYVAKELYGMGCSEISLGDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXX 317
           AYVAKELY MGCSEISLGDTIGVGTPGTVIPMLESVVDV                     
Sbjct: 194 AYVAKELYSMGCSEISLGDTIGVGTPGTVIPMLESVVDVVPIENLAVHFHDTYGQALSNI 253

Query: 318 XXXXXXXXXXVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDF 377
                     VDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKL+LAGDF
Sbjct: 254 LLSLQMGIGTVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLMLAGDF 313

Query: 378 ISKHLGRPSASKVAIALQKVASKPNKCTATASKL 412
           ISKHLGRPSASKVAIALQKVASKPNKCTATASKL
Sbjct: 314 ISKHLGRPSASKVAIALQKVASKPNKCTATASKL 347

[Close]

BLAST of Carg09818 vs. TAIR10
Match: AT2G26800.2 (Aldolase superfamily protein)

HSP 1 Score: 416.0 bits (1068), Expect = 2.7e-116
Identity = 217/311 (69.77%), Postives = 247/311 (79.42%), Query Frame = 0


Query: 101 IPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSGLRVVEATSFVSPKWVPQLADA 160
           IP+FVKIVEVGPRDGLQNEK+IVPT+VKVELI+ LVSSGL VVEATSFVSPKWVPQLADA
Sbjct: 164 IPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADA 223

Query: 161 NDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIFASASESFSKSNINCSIEESLR 220
            DVM+ +  ++GAR PVLTPN+KGF+AAV+AGAKEVAIFASASESFS SNINC+IEESL 
Sbjct: 224 KDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNINCTIEESLL 283

Query: 221 RYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAYVAKELYGMGCSEISLGDTIGV 280
           RYR VA AA++HS+PVRGYVSCVVGCP+EG V PS VAYV KELY MGC EISLGDTIG+
Sbjct: 284 RYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGI 343

Query: 281 GTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDCSVSGLGGCPY 340
           GTPG+V+PMLE+V+ V                               VD S++GLGGCPY
Sbjct: 344 GTPGSVVPMLEAVMAVVPADKLAVHFHDTYGQALANILVSLQMGISIVDSSIAGLGGCPY 403

Query: 341 AKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFISKHLGRPSASKVAIALQKVASK 400
           AKGASGNVATEDVVYMLNG+GV TNVDL KL+ AGDFISKHLGRP+ SK A+AL +    
Sbjct: 404 AKGASGNVATEDVVYMLNGLGVHTNVDLGKLIAAGDFISKHLGRPNGSKAAVALNR---- 463

Query: 401 PNKCTATASKL 412
             + TA ASK+
Sbjct: 464 --RITADASKI 468

[Close]

BLAST of Carg09818 vs. Swiss-Prot
Match: sp|O81027|HMGCL_ARATH (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HMGCL PE=1 SV=2)

HSP 1 Score: 416.0 bits (1068), Expect = 4.9e-115
Identity = 217/311 (69.77%), Postives = 247/311 (79.42%), Query Frame = 0


Query: 101 IPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSGLRVVEATSFVSPKWVPQLADA 160
           IP+FVKIVEVGPRDGLQNEK+IVPT+VKVELI+ LVSSGL VVEATSFVSPKWVPQLADA
Sbjct: 164 IPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADA 223

Query: 161 NDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIFASASESFSKSNINCSIEESLR 220
            DVM+ +  ++GAR PVLTPN+KGF+AAV+AGAKEVAIFASASESFS SNINC+IEESL 
Sbjct: 224 KDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNINCTIEESLL 283

Query: 221 RYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAYVAKELYGMGCSEISLGDTIGV 280
           RYR VA AA++HS+PVRGYVSCVVGCP+EG V PS VAYV KELY MGC EISLGDTIG+
Sbjct: 284 RYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGI 343

Query: 281 GTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDCSVSGLGGCPY 340
           GTPG+V+PMLE+V+ V                               VD S++GLGGCPY
Sbjct: 344 GTPGSVVPMLEAVMAVVPADKLAVHFHDTYGQALANILVSLQMGISIVDSSIAGLGGCPY 403

Query: 341 AKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFISKHLGRPSASKVAIALQKVASK 400
           AKGASGNVATEDVVYMLNG+GV TNVDL KL+ AGDFISKHLGRP+ SK A+AL +    
Sbjct: 404 AKGASGNVATEDVVYMLNGLGVHTNVDLGKLIAAGDFISKHLGRPNGSKAAVALNR---- 463

Query: 401 PNKCTATASKL 412
             + TA ASK+
Sbjct: 464 --RITADASKI 468

[Close]

BLAST of Carg09818 vs. Swiss-Prot
Match: sp|Q8JZS7|HMGC2_MOUSE (3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Mus musculus OX=10090 GN=Hmgcll1 PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.4e-92
Identity = 176/312 (56.41%), Postives = 218/312 (69.87%), Query Frame = 0


Query: 82  GDIVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSGLR 141
           GD V    +  + +  L  +P++VKIVEVGPRDGLQNEK IVPT +K+ELI  L  +GL 
Sbjct: 25  GDSVAGALDAAQEASQLPGLPEYVKIVEVGPRDGLQNEKVIVPTDIKIELINQLSQTGLS 84

Query: 142 VVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIFAS 201
           V+E TSFVS +WVPQ+AD  +VM GIR   G R+PVLTPN++GF+ AVAAGA E+A+F +
Sbjct: 85  VIEVTSFVSSRWVPQMADHAEVMRGIRQYPGVRYPVLTPNLQGFQHAVAAGATEIAVFGA 144

Query: 202 ASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAYVA 261
           ASESFSK NINCSIEES+ R++EV  +AR   +PVRGYVSC +GCP EG + P  V  V+
Sbjct: 145 ASESFSKKNINCSIEESMGRFQEVISSARHMDIPVRGYVSCALGCPYEGSITPQKVTEVS 204

Query: 262 KELYGMGCSEISLGDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXXXX 321
           K LYGMGC EISLGDTIGVGTPG++  MLESV+                           
Sbjct: 205 KRLYGMGCYEISLGDTIGVGTPGSMKMMLESVMKEIPPGALAVHCHDTYGQALANILTAL 264

Query: 322 XXXXXXVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFISKH 381
                 VD +VSGLGGCPYAKGASGNVATED++YMLNG+G+ T VDL K++ AG+FI K 
Sbjct: 265 QMGINVVDSAVSGLGGCPYAKGASGNVATEDLIYMLNGMGLNTGVDLYKVMEAGEFICKA 324

Query: 382 LGRPSASKVAIA 394
           + + + SKVA A
Sbjct: 325 VNKTTNSKVAQA 336

[Close]

BLAST of Carg09818 vs. Swiss-Prot
Match: sp|P97519|HMGCL_RAT (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 8.3e-91
Identity = 176/297 (59.26%), Postives = 215/297 (72.39%), Query Frame = 0


Query: 101 IPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSGLRVVEATSFVSPKWVPQLADA 160
           +P+ VKIVEVGPRDGLQNEK IVPT VK++LI ML  +GL V+EATSFVSPKWVPQ+AD 
Sbjct: 29  LPKRVKIVEVGPRDGLQNEKSIVPTPVKIKLIDMLSEAGLPVIEATSFVSPKWVPQMADH 88

Query: 161 NDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIFASASESFSKSNINCSIEESLR 220
           +DV++GI+   G  +PVLTPN+KGFE AVAAGAKEV+IF +ASE F++ N+NCSIEES +
Sbjct: 89  SDVLKGIQKFPGINYPVLTPNMKGFEEAVAAGAKEVSIFGAASELFTRKNVNCSIEESFQ 148

Query: 221 RYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAYVAKELYGMGCSEISLGDTIGV 280
           R+  V  AAR  S+ VRGYVSC +GCP EG V P+ VA VAK+LY MGC EISLGDTIGV
Sbjct: 149 RFDGVMQAARAASISVRGYVSCALGCPYEGKVSPAKVAEVAKKLYSMGCYEISLGDTIGV 208

Query: 281 GTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDCSVSGLGGCPY 340
           GTPG +  ML +V+                                 VD SV+GLGGCPY
Sbjct: 209 GTPGLMKDMLTAVLHEVPVAALAVHCHDTYGQALANTLVALQMGVSVVDSSVAGLGGCPY 268

Query: 341 AKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFISKHLGRPSASKVAIALQKV 398
           AKGASGN+ATED+VYML G+G+ T V+L+KL+ AGDFI + L R ++SKVA A  K+
Sbjct: 269 AKGASGNLATEDLVYMLTGLGIHTGVNLQKLLEAGDFICQALNRKTSSKVAQATCKL 325

[Close]

BLAST of Carg09818 vs. Swiss-Prot
Match: sp|P38060|HMGCL_MOUSE (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Mus musculus OX=10090 GN=Hmgcl PE=1 SV=2)

HSP 1 Score: 332.8 bits (852), Expect = 5.4e-90
Identity = 174/297 (58.59%), Postives = 213/297 (71.72%), Query Frame = 0


Query: 101 IPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSGLRVVEATSFVSPKWVPQLADA 160
           +P+ VKIVEVGPRDGLQNEK IVPT VK+ LI ML  +GL V+EATSFVSPKWVPQ+AD 
Sbjct: 29  LPKQVKIVEVGPRDGLQNEKSIVPTPVKIRLIDMLSEAGLPVIEATSFVSPKWVPQMADH 88

Query: 161 NDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIFASASESFSKSNINCSIEESLR 220
           +DV++GI+   G  +PVLTPN+KGFE AVAAGAKEV++F + SE F++ N NCSIEES +
Sbjct: 89  SDVLKGIQKFPGINYPVLTPNMKGFEEAVAAGAKEVSVFGAVSELFTRKNANCSIEESFQ 148

Query: 221 RYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAYVAKELYGMGCSEISLGDTIGV 280
           R+  V  AA+  S+ VRGYVSC +GCP EG V P+ VA VAK+LY MGC EISLGDTIGV
Sbjct: 149 RFAGVMQAAQAASISVRGYVSCALGCPYEGKVSPAKVAEVAKKLYSMGCYEISLGDTIGV 208

Query: 281 GTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDCSVSGLGGCPY 340
           GTPG +  ML +V+                                 VD SV+GLGGCPY
Sbjct: 209 GTPGLMKDMLTAVMHEVPVTALAVHCHDTYGQALANTLVALQMGVSVVDSSVAGLGGCPY 268

Query: 341 AKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFISKHLGRPSASKVAIALQKV 398
           AKGASGN+ATED+VYMLNG+G+ T V+L+KL+ AGDFI + L R ++SKVA A  K+
Sbjct: 269 AKGASGNLATEDLVYMLNGLGIHTGVNLQKLLEAGDFICQALNRKTSSKVAQATCKL 325

[Close]

BLAST of Carg09818 vs. Swiss-Prot
Match: sp|P35915|HMGCL_CHICK (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Gallus gallus OX=9031 GN=HMGCL PE=1 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 7.1e-90
Identity = 172/292 (58.90%), Postives = 210/292 (71.92%), Query Frame = 0


Query: 102 PQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSGLRVVEATSFVSPKWVPQLADAN 161
           PQ VK+VEVGPRDGLQNEK +VPT VK+ LI ML  +GL V+EATSFVSP+WVPQ+AD  
Sbjct: 3   PQRVKVVEVGPRDGLQNEKSVVPTPVKIRLIDMLSETGLPVIEATSFVSPRWVPQMADHA 62

Query: 162 DVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIFASASESFSKSNINCSIEESLRR 221
           +VM+GI  + G  +PVLTPN+KGF+AAVAAGAKEV+IF +ASE F+K NINCSIEESL R
Sbjct: 63  EVMQGINKLPGVSYPVLTPNLKGFQAAVAAGAKEVSIFGAASELFTKKNINCSIEESLER 122

Query: 222 YREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAYVAKELYGMGCSEISLGDTIGVG 281
           + EV  AAR  S+PVRGYVSCV+GCP EG +  + VA V+K++Y MGC EISLGD IG+G
Sbjct: 123 FSEVMNAARAASIPVRGYVSCVLGCPYEGNISAAKVAEVSKKMYSMGCYEISLGDRIGIG 182

Query: 282 TPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDCSVSGLGGCPYA 341
           TPG++  ML +V+                                 VD SV+GLGGCPYA
Sbjct: 183 TPGSMKEMLAAVMKEVPVGALAVHCHDTYGQALANILVALQMGVSVVDASVAGLGGCPYA 242

Query: 342 KGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFISKHLGRPSASKVAIA 394
           +GASGNVATED+VYMLNG+G+ T VDL+KL+  G FI   L R + SKV+ A
Sbjct: 243 QGASGNVATEDLVYMLNGLGIHTGVDLQKLMDTGTFICNALNRRTNSKVSQA 294

[Close]

BLAST of Carg09818 vs. TrEMBL
Match: tr|A0A0A0LHM6|A0A0A0LHM6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G823050 PE=4 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 2.4e-159
Identity = 308/392 (78.57%), Postives = 320/392 (81.63%), Query Frame = 0


Query: 20  MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQGEVDNCCQQ 79
           MQAAK+SAK TR+  SWRH YN +M   + FL S SA+ VGVSS    GIQ E  NC QQ
Sbjct: 1   MQAAKLSAKFTRQSFSWRHAYNLSMETPTPFLVSPSATDVGVSSIRTPGIQREFYNCSQQ 60

Query: 80  DGGDIVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSG 139
           DG D VLSRENK  LSQYL  IP FVKIVEVGPRDGLQNEKHIVPTAVKV+LIKMLVSSG
Sbjct: 61  DGRDAVLSRENKGGLSQYLCRIPPFVKIVEVGPRDGLQNEKHIVPTAVKVDLIKMLVSSG 120

Query: 140 LRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIF 199
           L VVEATSFVSPKWVPQLADA +VMEGIRNVEGARFPVLTPN+KGFEAAVAAGAKEVAIF
Sbjct: 121 LPVVEATSFVSPKWVPQLADAKEVMEGIRNVEGARFPVLTPNLKGFEAAVAAGAKEVAIF 180

Query: 200 ASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAY 259
           ASASESFSKSNINCSIEESL RYR+VA AARKHSLPVRGYVSCVVGCPIEGMVP SNVAY
Sbjct: 181 ASASESFSKSNINCSIEESLHRYRQVADAARKHSLPVRGYVSCVVGCPIEGMVPASNVAY 240

Query: 260 VAKELYGMGCSEISLGDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXX 319
           VAKELY MGCSEISLGDTIGVGTPGTVIPMLESV +V                       
Sbjct: 241 VAKELYSMGCSEISLGDTIGVGTPGTVIPMLESVANVVPTENLAVHFHDTYGQALSNILV 300

Query: 320 XXXXXXXXVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFIS 379
                   VD SVSGLGGCPYAKGASGNVATEDVVYMLNGIG KTNVDL KL+LAGDFI 
Sbjct: 301 SLQMGIGTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGIGAKTNVDLGKLMLAGDFIC 360

Query: 380 KHLGRPSASKVAIALQKVASKPNKCTATASKL 412
           K LGRPSASKVAIAL+KVAS  NKCTATASKL
Sbjct: 361 KQLGRPSASKVAIALRKVASNTNKCTATASKL 392

[Close]

BLAST of Carg09818 vs. TrEMBL
Match: tr|A0A1S3B7B2|A0A1S3B7B2_CUCME (hydroxymethylglutaryl-CoA lyase, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486948 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 1.7e-157
Identity = 306/392 (78.06%), Postives = 319/392 (81.38%), Query Frame = 0


Query: 20  MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQGEVDNCCQQ 79
           MQAAK+SAK TR+  SWRH YN    +S + L S SA+ VGV+S    GIQ E  NC QQ
Sbjct: 1   MQAAKLSAKFTRQAFSWRHAYN----LSMKTLVSPSAADVGVNSITTPGIQREFYNCSQQ 60

Query: 80  DGGDIVLSRENKRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSG 139
           DG D VLSRENK  LSQ L  IP FVKIVEVGPRDGLQNEKHIVPTAVKV+LIKMLV SG
Sbjct: 61  DGRDAVLSRENKGGLSQNLCRIPPFVKIVEVGPRDGLQNEKHIVPTAVKVDLIKMLVFSG 120

Query: 140 LRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIF 199
           L VVEATSFVSPKWVPQLADA DVMEGIRNVEGARFPVLTPN+KGFEAAVAAGAKEVAIF
Sbjct: 121 LPVVEATSFVSPKWVPQLADAKDVMEGIRNVEGARFPVLTPNLKGFEAAVAAGAKEVAIF 180

Query: 200 ASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAY 259
           ASASESFSKSNINCSIEESL RYR+VA AARKHSLPVRGYVSCVVGCPIEGMVP SNVAY
Sbjct: 181 ASASESFSKSNINCSIEESLHRYRQVADAARKHSLPVRGYVSCVVGCPIEGMVPASNVAY 240

Query: 260 VAKELYGMGCSEISLGDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXX 319
           VAKELY MGCSEISLGDTIGVGTPGTVIPMLESV++V                       
Sbjct: 241 VAKELYSMGCSEISLGDTIGVGTPGTVIPMLESVINVVPIENLAVHFHDTYGQALSNILV 300

Query: 320 XXXXXXXXVDCSVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFIS 379
                   VD SVSGLGGCPYAKGASGNVATEDVVYMLNGIG KTNVDLEKL+LAGDFI 
Sbjct: 301 SLQMGIGTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGIGAKTNVDLEKLMLAGDFIC 360

Query: 380 KHLGRPSASKVAIALQKVASKPNKCTATASKL 412
           KHLGRPSASKVAIAL+KV S  NKCTATASKL
Sbjct: 361 KHLGRPSASKVAIALRKVTSNANKCTATASKL 388

[Close]

BLAST of Carg09818 vs. TrEMBL
Match: tr|W9SJS1|W9SJS1_9ROSA (Hydroxymethylglutaryl-CoA lyase OS=Morus notabilis OX=981085 GN=L484_014678 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.0e-122
Identity = 241/365 (66.03%), Postives = 276/365 (75.62%), Query Frame = 0


Query: 57  SHVGVSSTNGLGIQGE----------VDNCCQQDGGDIVLSRENKRRLSQYLRHIPQFVK 116
           S V ++   GLG  G             NC ++        +++ +  ++ + +IP++VK
Sbjct: 2   SQVDITRNGGLGSLGRNYRILGNGDGAGNCFRRHYSSQFDGKQSGKSTNKIVGNIPEYVK 61

Query: 117 IVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSGLRVVEATSFVSPKWVPQLADANDVMEG 176
           IVEVGPRDGLQNEKHI+PTA+KVELIK LVSSGLRV+EA+SFVSPKWVPQLADA DVME 
Sbjct: 62  IVEVGPRDGLQNEKHIIPTAIKVELIKKLVSSGLRVIEASSFVSPKWVPQLADAKDVMEA 121

Query: 177 IRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIFASASESFSKSNINCSIEESLRRYREVA 236
           IR+VEGARFPVLTPN+KGFEAAVAAGAKEVAIFASASESFSKSNINCSIE+SL RYR+VA
Sbjct: 122 IRDVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCSIEDSLIRYRDVA 181

Query: 237 VAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAYVAKELYGMGCSEISLGDTIGVGTPGTV 296
           +AA+K ++PVRGY+SCVVGCP+EG VPPS VA+VAKELY MGCSEISLGDTIGVGTPGTV
Sbjct: 182 LAAKKLTIPVRGYISCVVGCPVEGKVPPSQVAHVAKELYAMGCSEISLGDTIGVGTPGTV 241

Query: 297 IPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDCSVSGLGGCPYAKGASG 356
           IPMLE+V D                                VD SVSGLGGCPYAKGASG
Sbjct: 242 IPMLEAVTDAVPIKKLAVHFHDTYGQALSNMLVSLQVGITTVDSSVSGLGGCPYAKGASG 301

Query: 357 NVATEDVVYMLNGIGVKTNVDLEKLVLAGDFISKHLGRPSASKVAIALQKVASKPNKCTA 412
           NVA+EDVVYMLNG+GVKTNVDL KL+LAG+FIS HLGR S SKVAIAL+K     N C  
Sbjct: 302 NVASEDVVYMLNGLGVKTNVDLGKLILAGEFISNHLGRSSGSKVAIALRK-----NTC-- 358

[Close]

BLAST of Carg09818 vs. TrEMBL
Match: tr|A0A251N621|A0A251N621_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G031100 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.6e-121
Identity = 235/321 (73.21%), Postives = 258/321 (80.37%), Query Frame = 0


Query: 91  KRRLSQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSGLRVVEATSFVS 150
           K  +S  L++IP+FVKIVEVGPRDGLQNEKHIVPTAVKV+LI+MLV+SGL VVEATSFVS
Sbjct: 57  KEPISNLLKNIPEFVKIVEVGPRDGLQNEKHIVPTAVKVKLIEMLVASGLDVVEATSFVS 116

Query: 151 PKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIFASASESFSKSN 210
           PKWVPQLADA DVM+ IRNVEG RFPVLTPN+KGFEAAVAAGAKEVAIFASASESFSKSN
Sbjct: 117 PKWVPQLADAKDVMKAIRNVEGVRFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSN 176

Query: 211 INCSIEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAYVAKELYGMGCS 270
           INCSIE+SL RY +VA AA K S+PVRGY+SCVVGCP+EG V PS VAYVAK+LY MGCS
Sbjct: 177 INCSIEDSLIRYHDVATAATKLSIPVRGYISCVVGCPVEGTVLPSQVAYVAKKLYNMGCS 236

Query: 271 EISLGDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDC 330
           +ISLGDTIGVGTPGT+IPMLE+V DV                               VD 
Sbjct: 237 DISLGDTIGVGTPGTIIPMLEAVTDVVPTDKLAVHYHDTYGQALSNILASLQMGISTVDS 296

Query: 331 SVSGLGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFISKHLGRPSASKV 390
           SVSGLGGCPYAKGASGNVATEDVVYMLNG+GVKTNVDL+KL+LAGDFI KHLGR S SK 
Sbjct: 297 SVSGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLKKLMLAGDFICKHLGRSSGSKT 356

Query: 391 AIALQKVASKPNKCTATASKL 412
           A+A+ KV       TA ASKL
Sbjct: 357 AVAMSKV-------TAHASKL 370

[Close]

BLAST of Carg09818 vs. TrEMBL
Match: tr|A0A2P4IAJ8|A0A2P4IAJ8_QUESU (Isoform 2 of hydroxymethylglutaryl-coa lyase, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_47127 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.4e-121
Identity = 230/309 (74.43%), Postives = 254/309 (82.20%), Query Frame = 0


Query: 95  SQYLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVELIKMLVSSGLRVVEATSFVSPKWV 154
           +++L+ IP FVKIVEVGPRDGLQNE +IVPTAVK+ELIK LVSSGL VVEATSFVSPKWV
Sbjct: 105 NKFLKSIPGFVKIVEVGPRDGLQNESNIVPTAVKIELIKRLVSSGLPVVEATSFVSPKWV 164

Query: 155 PQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVAAGAKEVAIFASASESFSKSNINCS 214
           PQLADA DVME IRNVE ARFPVLTPN+KGFEAAVAAGAKEVAIFASASE+FSKSNINCS
Sbjct: 165 PQLADAKDVMEAIRNVEAARFPVLTPNLKGFEAAVAAGAKEVAIFASASEAFSKSNINCS 224

Query: 215 IEESLRRYREVAVAARKHSLPVRGYVSCVVGCPIEGMVPPSNVAYVAKELYGMGCSEISL 274
           I++SL RY +V  AARK S+PVRGY+SCVVGCP+EG+VPP+ VAYVAKELY MGCSEISL
Sbjct: 225 IKDSLTRYSDVTFAARKVSIPVRGYISCVVGCPVEGVVPPAKVAYVAKELYDMGCSEISL 284

Query: 275 GDTIGVGTPGTVIPMLESVVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDCSVSG 334
           GDTIGVGTPGTVIPMLE+V+DV                               VD SVSG
Sbjct: 285 GDTIGVGTPGTVIPMLEAVMDVVPVDRLAVHFHDTYGQALSNILVSLQMGISTVDSSVSG 344

Query: 335 LGGCPYAKGASGNVATEDVVYMLNGIGVKTNVDLEKLVLAGDFISKHLGRPSASKVAIAL 394
           LGGCPYAKGASGNVATEDVVYML+G+GVKTNV+L KL+LAGDFISKHLGRPS SK A+AL
Sbjct: 345 LGGCPYAKGASGNVATEDVVYMLHGLGVKTNVNLGKLMLAGDFISKHLGRPSGSKTAVAL 404

Query: 395 QKVASKPNK 404
            K  S  +K
Sbjct: 405 SKATSNASK 413

The following BLAST results are available for this feature:

BLAST of Carg09818 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934490.1	9.1e-195	99.49	hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1 [Cucurbita moscha...	[more]
XP_023526450.1	3.8e-193	90.82	hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1 [Cucurbita pepo s...	[more]
XP_022983793.1	9.4e-192	90.56	hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1 [Cucurbita maxima...	[more]
XP_022934491.1	1.5e-160	99.40	hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X2 [Cucurbita moscha...	[more]
XP_023526452.1	2.8e-159	89.52	hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X2 [Cucurbita pepo s...	[more]

BLAST of Carg09818 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26800.2	2.7e-116	69.77	Aldolase superfamily protein	[more]

BLAST of Carg09818 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O81027\|HMGCL_ARATH	4.9e-115	69.77	Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q8JZS7\|HMGC2_MOUSE	3.4e-92	56.41	3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Mus musculus OX=10090...	[more]
sp\|P97519\|HMGCL_RAT	8.3e-91	59.26	Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=...	[more]
sp\|P38060\|HMGCL_MOUSE	5.4e-90	58.59	Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Mus musculus OX=10090 GN=Hmgcl...	[more]
sp\|P35915\|HMGCL_CHICK	7.1e-90	58.90	Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Gallus gallus OX=9031 GN=HMGCL...	[more]

BLAST of Carg09818 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LHM6\|A0A0A0LHM6_CUCSA	2.4e-159	78.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G823050 PE=4 SV=1	[more]
tr\|A0A1S3B7B2\|A0A1S3B7B2_CUCME	1.7e-157	78.06	hydroxymethylglutaryl-CoA lyase, mitochondrial-like OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|W9SJS1\|W9SJS1_9ROSA	4.0e-122	66.03	Hydroxymethylglutaryl-CoA lyase OS=Morus notabilis OX=981085 GN=L484_014678 PE=4...	[more]
tr\|A0A251N621\|A0A251N621_PRUPE	2.6e-121	73.21	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G031100 PE=4 SV=1	[more]
tr\|A0A2P4IAJ8\|A0A2P4IAJ8_QUESU	3.4e-121	74.43	Isoform 2 of hydroxymethylglutaryl-coa lyase, mitochondrial OS=Quercus suber OX=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005739	mitochondrion

Vocabulary: **Molecular Function**
Term	Definition
GO:0004419	hydroxymethylglutaryl-CoA lyase activity
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0046951	ketone body biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR030020	HL_mitochondrial
IPR000891	PYR_CT
IPR013785	Aldolase_TIM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006550	isoleucine catabolic process
biological_process	GO:0046951	ketone body biosynthetic process
biological_process	GO:0006552	leucine catabolic process
biological_process	GO:0006574	valine catabolic process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004419	hydroxymethylglutaryl-CoA lyase activity
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09818-RA	Carg09818-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013785	Aldolase-type TIM barrel	GENE3D	G3DSA:3.20.20.70		coord: 98..398 e-value: 4.0E-131 score: 438.8
IPR000891	Pyruvate carboxyltransferase	PFAM	PF00682	HMGL-like	coord: 105..377 e-value: 1.3E-55 score: 188.8
IPR000891	Pyruvate carboxyltransferase	PROSITE	PS50991	PYR_CT	coord: 105..372 score: 34.961
None	No IPR available	PANTHER	PTHR42738	FAMILY NOT NAMED	coord: 89..400
None	No IPR available	CDD	cd07938	DRE_TIM_HMGL	coord: 107..380 e-value: 3.5207E-173 score: 487.285
None	No IPR available	SUPERFAMILY	SSF51569	Aldolase	coord: 100..394
IPR030020	Hydroxymethylglutaryl-CoA lyase, mitochondrial	PANTHER	PTHR42738:SF6	SUBFAMILY NOT NAMED	coord: 89..400

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09818	Cla002934	Watermelon (97103) v1	carwmB0431
Carg09818	Csa3G823050	Cucumber (Chinese Long) v2	carcuB0467
Carg09818	MELO3C009815	Melon (DHL92) v3.5.1	carmeB0443
Carg09818	ClCG10G015600	Watermelon (Charleston Gray)	carwcgB0426
Carg09818	CSPI03G38410	Wild cucumber (PI 183967)	carcpiB0472
Carg09818	Cucsa.338300	Cucumber (Gy14) v1	carcgyB0506
Carg09818	CmaCh14G005560	Cucurbita maxima (Rimu)	carcmaB0607
Carg09818	CmoCh14G005600	Cucurbita moschata (Rifu)	carcmoB0592
Carg09818	Lsi03G015400	Bottle gourd (USVL1VR-Ls)	carlsiB394
Carg09818	Cp4.1LG03g08300	Cucurbita pepo (Zucchini)	carcpeB0613
Carg09818	MELO3C009815.2	Melon (DHL92) v3.6.1	carmedB0445
Carg09818	CsaV3_3G040810	Cucumber (Chinese Long) v3	carcucB0468
Carg09818	Cla97C10G198510	Watermelon (97103) v2	carwmbB0456
Carg09818	Bhi11G002434	Wax gourd	carwgoB0521

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09818	Wax gourd	carwgoB0522
Carg09818	Cucumber (Gy14) v2	carcgybB0444