Carg09359 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09359
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	CCR4-NOT transcription complex subunit 7
Location	Cucurbita_argyrosperma_scaffold_018 : 860000 .. 866809 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTATTGGCTTTTCTTTACCGTTCTTACTCTGGCGCTGGTTTTCCGACGCCCCATCTGTTTCTTCTCAGATCCCGAGCCCTGTTCGTCGTCTATTTTTTGTTCTCTCACTTAGGGTTTTGTCGTTTTGTCGCTCTTATCGAGTTCACCTTGGAGGGATGTCGATTTTACCGAAAGGCGATTCCATTCAAATCCGTGAGGTTTGGAACGATAATTTGGAGGAGGAGTTTGCGCTAATCCGTGAGATTGTTGATAAATTTAACTACATAGCCATGGATACTGAGTTTCCTGGAGTGGTGCTTCGCCCGTTGGGTGCCTTCAAGAATATCAATGATTACAACTACCAGACTCTTAAGGATAATGTTGACATGTTGAAGTTGATTCAATTGGGTCTTACGTTCTCTGACGAGAATGGAAATCTCCCGACTTGTGGAACCGATAGCTTTTGTATTTGGCAGTTCAATTTCCGCGAGTTCAATATTGTTAGTGATATTTTTGCTAGTGATTCAATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTCAATCGTTTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTAAACGCAGATGTGAACTGGGTTACCTTCCACAGTGGGTATGATTTCGGTTACTTGCTGAAATTGCTCACTTGCCGAGGCTTACCAGAAAAGCAGGACGGATTCTTTGACCTGATCAATGTCTATTTCCCAGTGGTTTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTTCATGGTGGGCTGAACAAGCTTGCGGAGTTATTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTCTACTTTTAGGAAGTTAAGGAATACCTTTTTCAATGGATCTATACAGAAATACGCAGGTGTTTTGTATGGTCTCGGTGTTGAAAATGGACAGCGTACTAATTGAAATTGAAGAGAATTACCAAGTATTTGTAGAAGTGTGAGACTTTTAGTTACTTCTGTACAATTTGGCTAAAGCATTGATGATGATTGTAACTGTTTTCCGCTTTCCTTCCCTGTAATAGAAACCTCCGACTGTTTTTCGCAGCTTGTGGTTTCTTGTAAATTATGGCAGTTAGTGTTTCAATAAGAATCTTAATGACGTTTCTTTGAATGGGTTTTCACTTGTTTTGTGAGCTTACGTTCTTACATAGTCCTTTGGGTTATTAATTATGCAAGGCTCCAAAGCTACTTGGATTGATACACATTGTTGCCAATTGATCATATTTCTTTAACAACCAACTCGGTGATGGGAATTTTCAAGTCTTTCAACTGTTTTCTCCTGCTCTGATGATGTGACTGATTAGCTTTGTCTCCGGTGATGCCATTAGGATAGATATTGATTAGCTTTGTCTCCATGGATTAGATTGGAATCTGCTAGGAACTAACCGCCTGTCTCGCCCGTTAAGTTAGATCAGTTTTCTGTCATATTGGACACTTTTTTGGTTTCAGTAGTTGTTTGTATCTGATGATCCTTCAAGGCCCTCTCTATTCTTTGATTGTTATCTGTTTGATTGTCTTGATGTTAATGGCTTATTTTCTTCCACTTCCTATTGAACATTTGCAGACTCTATTAATACGTATGTTTTGAGGTATCTTTGTAGCTAATGTTTCATTTGCTGGTATGATTATAGAGTTAAACTGTTCTTTATATGGTACTGTCTTAGCACACGATATAGCATTGGTTACATTATCTTTTCTGATTTTAATCATGCACGAAACTCAGACGTATCTCTGGCTTGGAAATTCAGAATCGAACGAACGAGCCATGGAGATAGATCGATTCCTCTGCACATCAGGTGAGCATTGTATATAAGCTTTAGTTTGAAATTCTCACTTTGTAGCCATGTCTGATGAGATTCAATGCATTTCCCAACAATTTTAAGAGAGATGCATCCTATTACGGTTGCATATTAGTTTCAGCTGTCAAATCTCAAATCATATTTCTCAGCTTGACTTCTAACCAATTGCTCATTTGATCTGGTGGGGCAGTGGAATCATGATAGTTTTAGTGAAATTTCTGCCACAGTGATCTTAAAACTCTGAAATCTGAGAGAATTTACACATCTAAAACTGTTCATATTTGTACTGTCTTGTTTTGGTATTGCAGACATGGCCTGGAGCCTAAGCAAGTTGGAAACCAAGGAAACTGAACCAACCTCGGGTATACACAAAACCTTTTGACCATTTTTTAATCTCATGTTACCTCTACAATTCACTGCACTCTGCTGTTCATAAGGATTTGGATTTGATATGAAGCACATCTTCTTTGTTATTATTGTTGGATCCAGATTTTGTGGTGATATTAGTATATGACATTGGGTGGCTTCAGATTCTGTAGAGATAATTGTACCTAATCTTTTTGTTTGAGAGAAAGAGAGGCACAGAAATGGGTTGCACATGCATATGCCTACTAATCATATGGGCACAGAATATCTTTAAGAAACCCTTTGAGATTAGCCTACCTCTTACTTTATTCCCATCCTAGTCGAATTCAGCAAATTATGTTCACTTATGTCTAAGAATCTTCACTTCGATCGACATCCCGTGCAGCTCAATTATACGTTCCCAAATCCTTTTAGATTTTTTGTAACAGCCCAAACCCACCACCGTTAACATATATTGTCCTATTTGGATTTTAAAACGCGTTTGCTAGGAGAGGTTTTCACATCCTTGTAAGGAATGCTTCATTTACCTCTCTAATCGATGTGAGATCTCACAATTTACTCCTGTTGGGGGCCTAGCGTCCTCGCTAGCACATCTCACAATCTACTCCTATTGGGAGCCTAGTCTGGTGTCTGGCGTCTAGGGCCTCTGTCTGGTTTCCTTTAAGCTCATTGCATATTGTCCTCTTTGGGCTTTCCTTTAAGGTTTGCCTCTACTAGGGAGAGATTTCCATACTCTTGTAAGGAACGCTTCGATCCCTTCTCCAACCGAACCGATGTGAGATTTTTCTCACTTTTCTTTTTCAAAAGAGGATAATATGATCCCTTCTCCAACCGATGTGAGATTTTTCTCACTTTTCTTTTTCAAAAGAGGATAATATGGCGGAGATTTAAATCACTTGAGTACTAGATTTGGTTGGATTTTAATTGATAGGATTCAAGTTTAGACTCTTATTATTATTATTTTTTTAAAAATTAAAATTAAAAATATTACTGTTAGTTTTTATATTTTGTTATCCACCTTCTGCTTTTAAAAATTTAACCCTAGATTTAAAAAGTTTATTTATTTATTTTTTAAATAGTTCTAAAAATTTTATTTTTATTTTTAAAATTTAATTAAGAATTTAAATGACTAAATTTAAATATATGGTTAGTTATTTAATTTAAAGGCTAATCATTGATTAGAAGTGATTATGTCTAAATCATGGGCCCCAAATTGAGTGATTAAAGACGTGGGACGCATATAGGCTCCATTTCAGGATTTCTTTTTTAATTTCTTTCTTTTTTAAAAAAAAAAATTGATTAAAGTTTTTCAGAAAACAATAATATGGTATTTTCCAAACGGGTTTTGGTGGACTTGGGCCTATCATGAAGCCCACGGTTAAATTTATGAAAGCCCAATTGTATTAATGGGCTTGTTTAGCAGCTAAATTTTAATGTAAAAATACGCACCTATTTATTGGGTTTGAGAAACTTATTAAATAATAACAATAATACGCAACAAAAACAATCAAATTTCTAGGAATTATTTCTTACAAACTTCAAGATTCGTCATCTTGGACTAAGCTCACAAAATCACTACACTTCTCTGCTTCAAGATCGCTCTGTTTCAGCCATTAATCTTTGCTTTTCAAGGTCAGATTATCCGATTTCGCCACTCTGAGGAGTTTTCCCCTTTTGCTCAATCGCTTCTTTATCTACGGTTCGATCCTCACTCTGTTTTTCTGGTTCTTGCTTCACTCTGGGGTTTTTGTCTCCGAGATCTTCAAGATCTTGGAAGATTTCATAAGTGCCTTCTTCTTTAATTGAACGGCCGTACATCAGGTTTTTAGGGCTGAAGGTTTTTTTCCCCGGATTTTTGGCGGTAGGGTTTTTCCGTTTTTGCCATTTTTGTTGGGTCAGTTAGAGAATCAAGGTATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAATTTGGAGGAAGAGTTCGCTTTAATACGCGAAGTCGTCGACCAATTCAACTACATAGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATTTGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAAGATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTCATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCAAATCTTACCAGACACCCAGGAGGAGTTTTTTTATTTGATCCGTACGTATTTCCCAATGGTTTATGATGTCAAGCATTTGTTGAAGTTTTGCAACAGTATCTATGGTGGGCTCAGCAAGGTTGCAGAAACATTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAAATATGCCGGTGTTTTATATGGTCTCGGTGTCGAAAATGAACCGACTACTGATTGAAGACACTTACCAAGTATTTGTAGCATTGATGGGTGTCTCTGTATGATGTTGTAAATTAGTGCAGGTAGCAGTTAGTGTTTCAATAGAACCTTAATGGCACTCTTTAAGTTAGTGATCTTGTTTGGTTAGATGCTATGCTATATGTGCCTTACAATTCATTGAAACTGTTATACGTGAAAGATAGATGGACAAATACATAGTAGTGGCAATAGAGAACATATTTCCTCAAAAACTGTCAGCTCTGTGATTTGATTTTCTTTGCCTGGCCTGTTGATGTGATCCTTTATCCTCGTATGTGTCAATGCAGTTCTATCTTTACCGAACACTGACAATTGTCGATAGAACCATTAGCCTTTCTCACTTTTATGAACAGAGTTCTTGTTTAAACCTTATTACTGAGCAATTCTGGTAGAGAGCTTATTTGTTTCCTTCTCTAACTGCATGTATCTGATTCTTCCAAGTTTTTTGGAGAAATAGATCCCATGTGACATTCCAAGATACTGTCCATACATGTATTTGAACGGAGTTTAGAGGTAACCAGTTCTTTATCTTTTTTCTTTGTATTTGTGCACTAAACTGAGATATCCTTGGCTTATACAATGAGTTTCAAGTCTTTTCCTTGTTTTTTTTTCTTCAGGTATCTTAAGTTTTTGTTTTTCTCTTATTTGGGCGATGCTTGATTCGTACTTATTATGAACTCGATGCGGTTGGCTCAAGTTATCAATCCAAAACTTGCTTATCCCATCCTGTTCTCGCCTGGTGAGCATTCTTTAAGCTTTATCTTGAAGTTCACTTGGTATCAATATTTGATAAGATTCAATGCCTTCGCTACAACTCGATGTCCATTGTTATATGGAAGTGAAACTATGAAAGTAAAAATTATTTCAAATTAAGAAGTTGTGGTCTATCTAACCCTTTTCAGTCCTTGAATGGCTTTCAGTAAACAGCCTGAGACCTAAGCAAGTTGAAACGAAGAGTGGGACTGTGAAATGGAGGAATCATTTTGAAAGCTCGATCGTTTTCATGTGAGGGGAATCGACATATTTCAAGTGTCAAGAAAGCCAAATACCTGGCGTTTCCCGTCACCGTCTTGAATTGAAGTAGCTTCGGATTCTTCTGGTCAGTATTATGAGTTACCCTTTCCTAGATTTATTGACAAGAGTTGAGAAATTCTTTCCATACCACAACTTGAGATGAGAGTCAGGGAGGCAGTGGGGGTGTAGTTTAGAGAGTAGGAGCCATAGTTCCAGTAGAATAGGAATTAGAACCATGTAGGCTGAGGGACAATTGTGGGTTGCTGCATTTTGAGCTGAGGGACTTGACTGGTGTGACACTGTGAGTCTACTTCGAGCCCGAACCTTATGTTGAATGTTTGACAGACTCCTTCTCTATAATGCACAGGCACCTCTGTAGGTAAGCGAGTCGATTCTTGTAATGGTGGCGAGGCACGAGCAAGCTGCTACTCGGGGAATTACCAGGCAAATCTTCAAACACATGTTAAGGAAACATGTAAATAAAAGTACCAAACTCTCTACCCATGTATGCTTTTCACCTTGCGAAACACATTCTTAGTTATAGCGTTCAGATTTAGCTGATAATGAATGAACGAAACTGTTGTTCTTAACTTTTGCCATCTGTTAGAATTCTCCTGTTAAGTCCTCACAATATCCCAACTTTTGTTTAAAAAAAAAGAGATCGAGCAGAGATGTCCATTTTTATTTGCGGAGACTTGCTCGGAATGGAGAAGAAATTCTTAGTTTAGACGGGAAATGGGAGGGGAAGAGTGAGAGCATTTTTTCCGGTTAGTTCGGAGACAGGATTATATTCTC

mRNA sequence

TCTATTGGCTTTTCTTTACCGTTCTTACTCTGGCGCTGGTTTTCCGACGCCCCATCTGTTTCTTCTCAGATCCCGAGCCCTGTTCGTCGTCTATTTTTTGTTCTCTCACTTAGGGTTTTGTCGTTTTGTCGCTCTTATCGAGTTCACCTTGGAGGGATGTCGATTTTACCGAAAGGCGATTCCATTCAAATCCGTGAGGTTTGGAACGATAATTTGGAGGAGGAGTTTGCGCTAATCCGTGAGATTGTTGATAAATTTAACTACATAGCCATGGATACTGAGTTTCCTGGAGTGGTGCTTCGCCCGTTGGGTGCCTTCAAGAATATCAATGATTACAACTACCAGACTCTTAAGGATAATGTTGACATGTTGAAGTTGATTCAATTGGGTCTTACGTTCTCTGACGAGAATGGAAATCTCCCGACTTGTGGAACCGATAGCTTTTGTATTTGGCAGTTCAATTTCCGCGAGTTCAATATTGTTAGTGATATTTTTGCTAGTGATTCAATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTCAATCGTTTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTAAACGCAGATGTGAACTGGGTTACCTTCCACAGTGGGTATGATTTCGAGTTAAACTGTTCTTTATATGGTACTGTCTTAGCACACGATATAGCATTGGTTACATTATCTTTTCTGATTTTAATCATGCACGAAACTCAGACGTATCTCTGGCTTGGAAATTCAGAATCGAACGAACGAGCCATGGAGATAGATCGATTCCTCTGCACATCAGACATGGCCTGGAGCCTAAGCAAGTTGGAAACCAAGGAAACTGAACCAACCTCGGAGAATCAAGGTATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAATTTGGAGGAAGAGTTCGCTTTAATACGCGAAGTCGTCGACCAATTCAACTACATAGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATTTGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAAGATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTCATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCAAATCTTACCAGACACCCAGGAGGACAAGGTTGCAGAAACATTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAAATATGCCGGCACCTCTGTAGGTAAGCGAGTCGATTCTTGTAATGGTGGCGAGGCACGAGCAAGCTGCTACTCGGGGAATTACCAGGCAAATCTTCAAACACATGTTAAGGAAACATGTAAATAAAAGTACCAAACTCTCTACCCATGTATGCTTTTCACCTTGCGAAACACATTCTTAGTTATAGCGTTCAGATTTAGCTGATAATGAATGAACGAAACTGTTGTTCTTAACTTTTGCCATCTGTTAGAATTCTCCTGTTAAGTCCTCACAATATCCCAACTTTTGTTTAAAAAAAAAGAGATCGAGCAGAGATGTCCATTTTTATTTGCGGAGACTTGCTCGGAATGGAGAAGAAATTCTTAGTTTAGACGGGAAATGGGAGGGGAAGAGTGAGAGCATTTTTTCCGGTTAGTTCGGAGACAGGATTATATTCTC

Coding sequence (CDS)

TCTATTGGCTTTTCTTTACCGTTCTTACTCTGGCGCTGGTTTTCCGACGCCCCATCTGTTTCTTCTCAGATCCCGAGCCCTGTTCGTCGTCTATTTTTTGTTCTCTCACTTAGGGTTTTGTCGTTTTGTCGCTCTTATCGAGTTCACCTTGGAGGGATGTCGATTTTACCGAAAGGCGATTCCATTCAAATCCGTGAGGTTTGGAACGATAATTTGGAGGAGGAGTTTGCGCTAATCCGTGAGATTGTTGATAAATTTAACTACATAGCCATGGATACTGAGTTTCCTGGAGTGGTGCTTCGCCCGTTGGGTGCCTTCAAGAATATCAATGATTACAACTACCAGACTCTTAAGGATAATGTTGACATGTTGAAGTTGATTCAATTGGGTCTTACGTTCTCTGACGAGAATGGAAATCTCCCGACTTGTGGAACCGATAGCTTTTGTATTTGGCAGTTCAATTTCCGCGAGTTCAATATTGTTAGTGATATTTTTGCTAGTGATTCAATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTCAATCGTTTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTAAACGCAGATGTGAACTGGGTTACCTTCCACAGTGGGTATGATTTCGAGTTAAACTGTTCTTTATATGGTACTGTCTTAGCACACGATATAGCATTGGTTACATTATCTTTTCTGATTTTAATCATGCACGAAACTCAGACGTATCTCTGGCTTGGAAATTCAGAATCGAACGAACGAGCCATGGAGATAGATCGATTCCTCTGCACATCAGACATGGCCTGGAGCCTAAGCAAGTTGGAAACCAAGGAAACTGAACCAACCTCGGAGAATCAAGGTATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAATTTGGAGGAAGAGTTCGCTTTAATACGCGAAGTCGTCGACCAATTCAACTACATAGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATTTGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAAGATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTCATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCAAATCTTACCAGACACCCAGGAGGACAAGGTTGCAGAAACATTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAAATATGCCGGCACCTCTGTAGGTAAGCGAGTCGATTCTTGTAATGGTGGCGAGGCACGAGCAAGCTGCTACTCGGGGAATTACCAGGCAAATCTTCAAACACATGTTAAGGAAACATGTAAATAA

Protein sequence

SIGFSLPFLLWRWFSDAPSVSSQIPSPVRRLFFVLSLRVLSFCRSYRVHLGGMSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFELNCSLYGTVLAHDIALVTLSFLILIMHETQTYLWLGNSESNERAMEIDRFLCTSDMAWSLSKLETKETEPTSENQGMSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEDKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGTSVGKRVDSCNGGEARASCYSGNYQANLQTHVKETCK

Homology

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BLAST of Carg09359 vs. NCBI nr
Match: PPD90595.1 (hypothetical protein GOBAR_DD12480 [Gossypium barbadense])

HSP 1 Score: 543.1 bits (1398), Expect = 1.1e-150
Identity = 280/513 (54.58%), Postives = 330/513 (64.33%), Query Frame = 0


Query: 53  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDY 112
           MS+LPK DSI IREVW+DN+EEEFALIREIVD + Y+AMDTEFPG+VLRP+G FK+  DY
Sbjct: 1   MSLLPKSDSIHIREVWDDNVEEEFALIREIVDDYPYVAMDTEFPGIVLRPVGYFKSSYDY 60

Query: 113 NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIEL 172
           +YQTLKDNVDMLKL+QLGLTFSDE GNLPTCGTD +CIWQFNFREFN+  D+FA+DSIEL
Sbjct: 61  HYQTLKDNVDMLKLVQLGLTFSDEKGNLPTCGTDKYCIWQFNFREFNVNKDVFANDSIEL 120

Query: 173 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFELNCSLYGTVLAH 232
           LRQ GIDF+KNNE+GID  RF                                       
Sbjct: 121 LRQSGIDFKKNNEKGIDAMRF--------------------------------------- 180

Query: 233 DIALVTLSFLILIMHETQTYLWLGNSESNERAMEIDRFLCTSDMAWSLSKLETKETEPTS 292
              +VT+                                                     
Sbjct: 181 ---VVTI----------------------------------------------------- 240

Query: 293 ENQGMSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKN 352
                              W+ N+EEEFALIRE+VD + Y+AMDTEFPG+VLRPVG FK+
Sbjct: 241 ------------------XWDDNVEEEFALIREIVDDYPYVAMDTEFPGIVLRPVGYFKS 300

Query: 353 INEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATD 412
             +++Y+TLKDNVD+L L+QLGLTFS+E GNLPTCGTDKYCIWQFNFREFN+ +D++A D
Sbjct: 301 SYDYHYQTLKDNVDMLKLVQLGLTFSDEKGNLPTCGTDKYCIWQFNFREFNVNKDVFAND 360

Query: 413 SIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTC 472
           SI+LLR SGIDFKKN E+GID  RF ELLMSSGIVLND+V+WVTFHSGYDFGYLLKLLTC
Sbjct: 361 SIELLRQSGIDFKKNNEKGIDAMRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTC 400

Query: 473 QILPDTQE------------------------------DKVAETLEIERVGVCHQAGSDS 532
           Q LPDTQ                               +K+AE LE+ERVG+CHQAGSDS
Sbjct: 421 QNLPDTQVGFFSLINIYFPTLYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDS 400

Query: 533 LLTACTFRKLRDTFFSGSTQKYAGTSVGKRVDS 536
           LLTACTFRKL++ FFSGS +KY+G   G  V++
Sbjct: 481 LLTACTFRKLKENFFSGSLEKYSGVLYGLGVEN 400

[Close]

BLAST of Carg09359 vs. NCBI nr
Match: XP_022962455.1 (probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata] >XP_022962456.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata])

HSP 1 Score: 456.8 bits (1174), Expect = 1.0e-124
Identity = 230/269 (85.50%), Postives = 233/269 (86.62%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MSTFPKAESIYIREVWNHNLE EFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF
Sbjct: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL
Sbjct: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP
Sbjct: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180

Query: 477 DTQED------------------------------KVAETLEIERVGVCHQAGSDSLLTA 536
           DTQE+                              KVAETLEIERVGVCHQAGSDSLLTA
Sbjct: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240

[Close]

BLAST of Carg09359 vs. NCBI nr
Match: XP_022996959.1 (probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima] >XP_022996960.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima])

HSP 1 Score: 451.8 bits (1161), Expect = 3.3e-123
Identity = 227/269 (84.39%), Postives = 231/269 (85.87%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS FPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVG FKNINE+
Sbjct: 1   MSMFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGNFKNINEY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL
Sbjct: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           LRDSGIDFKKNKEEGIDV RFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP
Sbjct: 121 LRDSGIDFKKNKEEGIDVNRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180

Query: 477 DTQED------------------------------KVAETLEIERVGVCHQAGSDSLLTA 536
           DTQE+                              KVAETLEIERVGVCHQAGSDSLLTA
Sbjct: 181 DTQEEFFDLIHTYFPMVYDVKHLLKFCNSVYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240

[Close]

BLAST of Carg09359 vs. NCBI nr
Match: XP_023545659.1 (probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo] >XP_023545660.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-122
Identity = 226/269 (84.01%), Postives = 231/269 (85.87%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVG+FKNINEF
Sbjct: 1   MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGSFKNINEF 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           NYRTLKDNVDILNLIQLGLTFSEENGNLP CGTDKYCIWQFNFREFNI EDIYATDSIQL
Sbjct: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPKCGTDKYCIWQFNFREFNIAEDIYATDSIQL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           LRDSGIDFKKNKEEGIDV RFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP
Sbjct: 121 LRDSGIDFKKNKEEGIDVNRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180

Query: 477 DTQED------------------------------KVAETLEIERVGVCHQAGSDSLLTA 536
           +TQE+                              KVAETLEIERVGVCHQAGSDSLLTA
Sbjct: 181 ETQEEFFDLIHTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240

[Close]

BLAST of Carg09359 vs. NCBI nr
Match: XP_022132176.1 (probable CCR4-associated factor 1 homolog 7 [Momordica charantia])

HSP 1 Score: 405.6 bits (1041), Expect = 2.8e-109
Identity = 198/269 (73.61%), Postives = 221/269 (82.16%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS  PK ESI+IREVW+HNLEEEFAL+RE+VDQFNYIAMDTEFPGVVLRPVG FKNINE+
Sbjct: 1   MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+L
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           LR  GIDFKKN EEGIDV RF+ELLMSSGIVLND+V WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 477 DTQE------------------------------DKVAETLEIERVGVCHQAGSDSLLTA 536
           DTQ                               +K+AE LE+ER+GVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

[Close]

BLAST of Carg09359 vs. TAIR10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 348.6 bits (893), Expect = 7.2e-96
Identity = 174/270 (64.44%), Postives = 204/270 (75.56%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS F K +SI IREVWN NLE E ALIREVVD F ++AMDTEFPG+V RPVGTFK   E+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTD-KYCIWQFNFREFNITEDIYATDSIQ 416
           +Y TLK NV+IL +IQLGLTFS+E GNLPTCGTD KYCIWQFNFREF++  DIYATDSI+
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 417 LLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQIL 476
           LLR SGIDF KN E GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 477 PDTQE------------------------------DKVAETLEIERVGVCHQAGSDSLLT 536
           P+TQ                               +K+AE L++ERVG+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

[Close]

BLAST of Carg09359 vs. TAIR10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 342.4 bits (877), Expect = 5.2e-94
Identity = 168/263 (63.88%), Postives = 201/263 (76.43%), Query Frame = 0


Query: 302 KAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTL 361
           K +SI IREVW++NL EEFALIRE+VD+F+YIAMDTEFPGVVL+PV TFK  N+ NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 362 KDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSG 421
           K+NVD+L LIQ+GLTFS+ENGNLPTCGTDK+CIWQFNFREFNI EDIYA++SI+LLR  G
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 422 IDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQED 481
           IDFKKN E+GIDV RF EL+MSSGIVLND++ WVTFH GYDFGYL+KLLTC+ LP  Q D
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 482 ------------------------------KVAETLEIERVGVCHQAGSDSLLTACTFRK 535
                                         ++AE + +ERVG+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

[Close]

BLAST of Carg09359 vs. TAIR10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 342.0 bits (876), Expect = 6.8e-94
Identity = 169/274 (61.68%), Postives = 203/274 (74.09%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS F K +SI IREVWN NL+EE  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           +Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQFNFREF++  DI+A DSI+L
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           L+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 477 DTQED------------------------------KVAETLEIERVGVCHQAGSDSLLTA 536
           D+Q D                              K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 537 CTFRKLRDTFFSGSTQKYAGTSVGKRVDSCNGGE 541
           CTFRKL++ FF G   KY+G   G  V++   G+
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENEANGK 274

[Close]

BLAST of Carg09359 vs. TAIR10
Match: AT1G15920.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 258.8 bits (660), Expect = 7.5e-69
Identity = 133/263 (50.57%), Postives = 167/263 (63.50%), Query Frame = 0


Query: 304 ESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPV------GTFKNINEFN 363
           ++I IREVWNHNLE+E ALI + +D F Y+AMDTEFPG+V + V                
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVXXXXXXXXXXXXXXXX 71

Query: 364 YRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLL 423
                    +L LIQLGLT S+E GNLPTCGT+K CIWQFNFREFN+  D++A DSI+LL
Sbjct: 72  XXXXXXXXXMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 424 RDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPD 483
           R S ID +KN E G+D +RF+ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP+
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 484 TQED------------------------------KVAETLEIERVGVCHQAGSDSLLTAC 531
              D                              K+AE L ++RVG+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

[Close]

BLAST of Carg09359 vs. TAIR10
Match: AT3G44260.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 229.9 bits (585), Expect = 3.8e-60
Identity = 125/269 (46.47%), Postives = 167/269 (62.08%), Query Frame = 0


Query: 301 PKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRT 360
           P   ++  REVW  NLE EF LI E++D + +I+MDTEFPGV+ +    F N ++  Y  
Sbjct: 12  PDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDL-YTL 71

Query: 361 LKDNVDILNLIQLGLTFSEENGNLPTCGTDKY--CIWQFNFREFNITEDIYATDSIQLLR 420
           LK NVD L+LIQ+GLT S+ NGNLP  G D +   IW+FNFR+F++  D +A DSI+LLR
Sbjct: 72  LKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLR 131

Query: 421 DSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP-- 480
             GIDF++N  +G++  RF+EL+MSSG+V N+ V WVTFHS YDFGYL+K+LT + LP  
Sbjct: 132 RQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGA 191

Query: 481 -----------------DTQE-------------DKVAETLEIER-VGVCHQAGSDSLLT 534
                            D +              D+VA TLE+ R VG CHQAGSDSLLT
Sbjct: 192 LGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLT 251

[Close]

BLAST of Carg09359 vs. Swiss-Prot
Match: sp|Q9SKZ2|CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 348.6 bits (893), Expect = 1.3e-94
Identity = 174/270 (64.44%), Postives = 204/270 (75.56%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS F K +SI IREVWN NLE E ALIREVVD F ++AMDTEFPG+V RPVGTFK   E+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTD-KYCIWQFNFREFNITEDIYATDSIQ 416
           +Y TLK NV+IL +IQLGLTFS+E GNLPTCGTD KYCIWQFNFREF++  DIYATDSI+
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 417 LLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQIL 476
           LLR SGIDF KN E GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 477 PDTQE------------------------------DKVAETLEIERVGVCHQAGSDSLLT 536
           P+TQ                               +K+AE L++ERVG+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

[Close]

BLAST of Carg09359 vs. Swiss-Prot
Match: sp|Q9SAI2|CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 7.2e-93
Identity = 168/269 (62.45%), Postives = 201/269 (74.72%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS F K +SI IREVWN NL+EE  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           +Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQFNFREF++  DI+A DSI+L
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           L+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 477 DTQED------------------------------KVAETLEIERVGVCHQAGSDSLLTA 536
           D+Q D                              K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

[Close]

BLAST of Carg09359 vs. Swiss-Prot
Match: sp|Q9LEU4|CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 9.4e-93
Identity = 168/263 (63.88%), Postives = 201/263 (76.43%), Query Frame = 0


Query: 302 KAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTL 361
           K +SI IREVW++NL EEFALIRE+VD+F+YIAMDTEFPGVVL+PV TFK  N+ NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 362 KDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSG 421
           K+NVD+L LIQ+GLTFS+ENGNLPTCGTDK+CIWQFNFREFNI EDIYA++SI+LLR  G
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 422 IDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQED 481
           IDFKKN E+GIDV RF EL+MSSGIVLND++ WVTFH GYDFGYL+KLLTC+ LP  Q D
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 482 ------------------------------KVAETLEIERVGVCHQAGSDSLLTACTFRK 535
                                         ++AE + +ERVG+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

[Close]

BLAST of Carg09359 vs. Swiss-Prot
Match: sp|Q9S9P2|CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-67
Identity = 133/263 (50.57%), Postives = 167/263 (63.50%), Query Frame = 0


Query: 304 ESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPV------GTFKNINEFN 363
           ++I IREVWNHNLE+E ALI + +D F Y+AMDTEFPG+V + V                
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVXXXXXXXXXXXXXXXX 71

Query: 364 YRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLL 423
                    +L LIQLGLT S+E GNLPTCGT+K CIWQFNFREFN+  D++A DSI+LL
Sbjct: 72  XXXXXXXXXMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 424 RDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPD 483
           R S ID +KN E G+D +RF+ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP+
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 484 TQED------------------------------KVAETLEIERVGVCHQAGSDSLLTAC 531
              D                              K+AE L ++RVG+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

[Close]

BLAST of Carg09359 vs. Swiss-Prot
Match: sp|Q08BM8|CNOT7_DANRE (CCR4-NOT transcription complex subunit 7 OS=Danio rerio OX=7955 GN=cnot7 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.6e-60
Identity = 129/255 (50.59%), Postives = 162/255 (63.53%), Query Frame = 0


Query: 308 IREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDI 367
           I EVW  NLEEE   IR+V  +FNYIAMDTEFPGVV RP+G F++  ++ Y+ L+ NVD+
Sbjct: 12  ICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71

Query: 368 LNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSGIDFKKN 427
           L +IQLGLTF  E G  P  GT     WQFNF+ FN+TED+YA DSI+LL  SGI FKK+
Sbjct: 72  LKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKH 131

Query: 428 KEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQED------ 487
           +EEGI+   F+ELLM+SG+VL + V W++FHSGYDFGYL+K+L+   LPD + D      
Sbjct: 132 EEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPDEEVDFFEILR 191

Query: 488 ------------------------KVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFF 531
                                   +VAE LE+ER+G  HQAGSDSLLT   F K+R+ FF
Sbjct: 192 LFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFF 251

[Close]

BLAST of Carg09359 vs. TrEMBL
Match: tr|A0A2P5RUW6|A0A2P5RUW6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD12480 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 7.3e-151
Identity = 280/513 (54.58%), Postives = 330/513 (64.33%), Query Frame = 0


Query: 53  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDY 112
           MS+LPK DSI IREVW+DN+EEEFALIREIVD + Y+AMDTEFPG+VLRP+G FK+  DY
Sbjct: 1   MSLLPKSDSIHIREVWDDNVEEEFALIREIVDDYPYVAMDTEFPGIVLRPVGYFKSSYDY 60

Query: 113 NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIEL 172
           +YQTLKDNVDMLKL+QLGLTFSDE GNLPTCGTD +CIWQFNFREFN+  D+FA+DSIEL
Sbjct: 61  HYQTLKDNVDMLKLVQLGLTFSDEKGNLPTCGTDKYCIWQFNFREFNVNKDVFANDSIEL 120

Query: 173 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFELNCSLYGTVLAH 232
           LRQ GIDF+KNNE+GID  RF                                       
Sbjct: 121 LRQSGIDFKKNNEKGIDAMRF--------------------------------------- 180

Query: 233 DIALVTLSFLILIMHETQTYLWLGNSESNERAMEIDRFLCTSDMAWSLSKLETKETEPTS 292
              +VT+                                                     
Sbjct: 181 ---VVTI----------------------------------------------------- 240

Query: 293 ENQGMSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKN 352
                              W+ N+EEEFALIRE+VD + Y+AMDTEFPG+VLRPVG FK+
Sbjct: 241 ------------------XWDDNVEEEFALIREIVDDYPYVAMDTEFPGIVLRPVGYFKS 300

Query: 353 INEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATD 412
             +++Y+TLKDNVD+L L+QLGLTFS+E GNLPTCGTDKYCIWQFNFREFN+ +D++A D
Sbjct: 301 SYDYHYQTLKDNVDMLKLVQLGLTFSDEKGNLPTCGTDKYCIWQFNFREFNVNKDVFAND 360

Query: 413 SIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTC 472
           SI+LLR SGIDFKKN E+GID  RF ELLMSSGIVLND+V+WVTFHSGYDFGYLLKLLTC
Sbjct: 361 SIELLRQSGIDFKKNNEKGIDAMRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTC 400

Query: 473 QILPDTQE------------------------------DKVAETLEIERVGVCHQAGSDS 532
           Q LPDTQ                               +K+AE LE+ERVG+CHQAGSDS
Sbjct: 421 QNLPDTQVGFFSLINIYFPTLYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDS 400

Query: 533 LLTACTFRKLRDTFFSGSTQKYAGTSVGKRVDS 536
           LLTACTFRKL++ FFSGS +KY+G   G  V++
Sbjct: 481 LLTACTFRKLKENFFSGSLEKYSGVLYGLGVEN 400

[Close]

BLAST of Carg09359 vs. TrEMBL
Match: tr|A0A0A0LSM4|A0A0A0LSM4_CUCSA (Ccr4-associated factor OS=Cucumis sativus OX=3659 GN=Csa_2G382590 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.5e-106
Identity = 192/269 (71.38%), Postives = 218/269 (81.04%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS  PK ESI IREVWN NLEEEFALIR++VDQFNYIAMDTEFPGVV+RPVG+FKNINE+
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           NYRTL++NVD L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI +DIYA+DSI+L
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           LR+ GIDF+K  EEGIDV RF ELLMSSGIVLND+++WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 477 DTQED------------------------------KVAETLEIERVGVCHQAGSDSLLTA 536
           +TQ +                              K+AE LE+ER+GVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

[Close]

BLAST of Carg09359 vs. TrEMBL
Match: tr|B9RNX3|B9RNX3_RICCO (Ccr4-associated factor, putative OS=Ricinus communis OX=3988 GN=RCOM_0921770 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 3.2e-106
Identity = 190/269 (70.63%), Postives = 217/269 (80.67%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS  PK +SI+IREVWN NLEEEF LIRE+VDQFNY+AMDTEFPGVVLRPVG FKNIN++
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+L
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           LR  GIDFKKN E+GIDV RF EL+MSSGIVLND V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 477 DTQE------------------------------DKVAETLEIERVGVCHQAGSDSLLTA 536
           DTQ                               +K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

[Close]

BLAST of Carg09359 vs. TrEMBL
Match: tr|A0A2I4ES95|A0A2I4ES95_9ROSI (probable CCR4-associated factor 1 homolog 7 OS=Juglans regia OX=51240 GN=LOC108992231 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.6e-105
Identity = 192/269 (71.38%), Postives = 217/269 (80.67%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS  PK +SI IR+VWN NLEEEFALIREVVD +NYIAMDTEFPGVVLRPVGTFKNIN++
Sbjct: 1   MSILPKGDSIQIRDVWNDNLEEEFALIREVVDNYNYIAMDTEFPGVVLRPVGTFKNINDY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           NY+TLKDNVD+L LIQLGLTFS+E+GNLPTCGTD +CIWQFNFREFNI+EDI+A+DSI+L
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGTDMFCIWQFNFREFNISEDIFASDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           L  SGIDFKKN E+GIDV RF ELLMSSGIVLND V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LHQSGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 477 DTQE------------------------------DKVAETLEIERVGVCHQAGSDSLLTA 536
           DTQ                               +K+AE L++ERVGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINMYFPIVYDIKHLMKFCNSLHGGLNKLAELLDVERVGVCHQAGSDSLLTA 240

[Close]

BLAST of Carg09359 vs. TrEMBL
Match: tr|A0A1S3TXE2|A0A1S3TXE2_VIGRR (probable CCR4-associated factor 1 homolog 7 OS=Vigna radiata var. radiata OX=3916 GN=LOC106759661 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.6e-105
Identity = 191/269 (71.00%), Postives = 217/269 (80.67%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS  PK +S+ IREVWN NLEEEFALIRE+VD++NY+AMDTEFPGVVLRPVG FKNIN++
Sbjct: 1   MSIIPKGDSVQIREVWNDNLEEEFALIREIVDEYNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGT+  CIWQFNFREFNI+EDI+A+DSI+L
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTESPCIWQFNFREFNISEDIFASDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           LR  GIDFKKN E+GIDV RF ELLMSSGIVLND+V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRQCGIDFKKNSEKGIDVNRFGELLMSSGIVLNDAVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 477 DTQE------------------------------DKVAETLEIERVGVCHQAGSDSLLTA 536
           DTQ                               +K+AE LE+ERVGVCHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLIKMYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTS 240

The following BLAST results are available for this feature:

BLAST of Carg09359 vs. NCBI nr


Match Name	E-value	Identity	Description
PPD90595.1	1.1e-150	54.58	hypothetical protein GOBAR_DD12480 [Gossypium barbadense]	[more]
XP_022962455.1	1.0e-124	85.50	probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata] >XP_022962456.1...	[more]
XP_022996959.1	3.3e-123	84.39	probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima] >XP_022996960.1 p...	[more]
XP_023545659.1	1.3e-122	84.01	probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo] >XP_023...	[more]
XP_022132176.1	2.8e-109	73.61	probable CCR4-associated factor 1 homolog 7 [Momordica charantia]	[more]

BLAST of Carg09359 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32070.1	7.2e-96	64.44	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G10960.1	5.2e-94	63.88	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	6.8e-94	61.68	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G15920.2	7.5e-69	50.57	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G44260.1	3.8e-60	46.47	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of Carg09359 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SKZ2\|CAF1G_ARATH	1.3e-94	64.44	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
sp\|Q9SAI2\|CAF1F_ARATH	7.2e-93	62.45	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
sp\|Q9LEU4\|CAF1J_ARATH	9.4e-93	63.88	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q9S9P2\|CAF1B_ARATH	1.4e-67	50.57	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
sp\|Q08BM8\|CNOT7_DANRE	3.6e-60	50.59	CCR4-NOT transcription complex subunit 7 OS=Danio rerio OX=7955 GN=cnot7 PE=2 SV...	[more]

BLAST of Carg09359 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P5RUW6\|A0A2P5RUW6_GOSBA	7.3e-151	54.58	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD12480 PE=4 SV...	[more]
tr\|A0A0A0LSM4\|A0A0A0LSM4_CUCSA	2.5e-106	71.38	Ccr4-associated factor OS=Cucumis sativus OX=3659 GN=Csa_2G382590 PE=4 SV=1	[more]
tr\|B9RNX3\|B9RNX3_RICCO	3.2e-106	70.63	Ccr4-associated factor, putative OS=Ricinus communis OX=3988 GN=RCOM_0921770 PE=...	[more]
tr\|A0A2I4ES95\|A0A2I4ES95_9ROSI	1.6e-105	71.38	probable CCR4-associated factor 1 homolog 7 OS=Juglans regia OX=51240 GN=LOC1089...	[more]
tr\|A0A1S3TXE2\|A0A1S3TXE2_VIGRR	1.6e-105	71.00	probable CCR4-associated factor 1 homolog 7 OS=Vigna radiata var. radiata OX=391...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR036397	RNaseH_sf
IPR006941	RNase_CAF1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09359-RA	Carg09359-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 311..432 e-value: 1.9E-11 score: 43.6 coord: 67..188 e-value: 1.4E-10 score: 40.8
IPR036397	Ribonuclease H superfamily	GENE3D	G3DSA:3.30.420.10		coord: 294..532 e-value: 1.5E-90 score: 305.2 coord: 52..226 e-value: 1.3E-75 score: 256.1
None	No IPR available	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 53..223 coord: 297..481 coord: 481..536
None	No IPR available	PANTHER	PTHR10797:SF31	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED	coord: 53..223 coord: 297..481 coord: 481..536
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	SSF53098	Ribonuclease H-like	coord: 307..522
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	SSF53098	Ribonuclease H-like	coord: 58..220

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09359	Cla022358	Watermelon (97103) v1	carwmB0133
Carg09359	Csa2G382590	Cucumber (Chinese Long) v2	carcuB0150
Carg09359	MELO3C011292	Melon (DHL92) v3.5.1	carmeB0143
Carg09359	ClCG08G013650	Watermelon (Charleston Gray)	carwcgB0137
Carg09359	CSPI02G23860	Wild cucumber (PI 183967)	carcpiB0155
Carg09359	Cucsa.162770	Cucumber (Gy14) v1	carcgyB0171
Carg09359	CmaCh05G003560	Cucurbita maxima (Rimu)	carcmaB0189
Carg09359	CmaCh12G003600	Cucurbita maxima (Rimu)	carcmaB0183
Carg09359	CmoCh05G003590	Cucurbita moschata (Rifu)	carcmoB0196
Carg09359	CmoCh12G003130	Cucurbita moschata (Rifu)	carcmoB0192
Carg09359	Lsi08G012400	Bottle gourd (USVL1VR-Ls)	carlsiB128
Carg09359	Cp4.1LG11g02960	Cucurbita pepo (Zucchini)	carcpeB0199
Carg09359	Cp4.1LG07g03270	Cucurbita pepo (Zucchini)	carcpeB0205
Carg09359	CsGy2G023610	Cucumber (Gy14) v2	carcgybB0148
Carg09359	MELO3C011292.2	Melon (DHL92) v3.6.1	carmedB0147
Carg09359	CsaV3_2G032410	Cucumber (Chinese Long) v3	carcucB0159
Carg09359	Cla97C08G157060	Watermelon (97103) v2	carwmbB0149
Carg09359	Bhi04G000032	Wax gourd	carwgoB0173

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg09359	Carg03951	Silver-seed gourd	carcarB168

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09359	Silver-seed gourd	carcarB163
Carg09359	Cucumber (Gy14) v2	carcgybB0154
Carg09359	Cucurbita maxima (Rimu)	carcmaB0182
Carg09359	Cucumber (Gy14) v1	carcgyB0173
Carg09359	Cucurbita moschata (Rifu)	carcmoB0191
Carg09359	Cucurbita pepo (Zucchini)	carcpeB0204
Carg09359	Wild cucumber (PI 183967)	carcpiB0161
Carg09359	Cucumber (Chinese Long) v2	carcuB0156
Carg09359	Cucumber (Chinese Long) v3	carcucB0164
Carg09359	Bottle gourd (USVL1VR-Ls)	carlsiB126
Carg09359	Melon (DHL92) v3.5.1	carmeB0146
Carg09359	Melon (DHL92) v3.6.1	carmedB0150
Carg09359	Watermelon (Charleston Gray)	carwcgB0135
Carg09359	Watermelon (97103) v1	carwmB0136
Carg09359	Watermelon (97103) v2	carwmbB0147
Carg09359	Wax gourd	carwgoB0180