Carg09287 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGAAACTGGCCTTCGATTTCCCTGTAAACGTCCTCATTTTTCCCTCCATTCCGATCATTTCCTTCGAGGCAGTGTATCTCCGTTTGGTTGTAGTTCCTGTTTTTTGTTCTCATATTTCCCTAGATTCTAGCTCAAGGTAAAGTTGAAGTTAGTAAGATTTTGTTCGTTTTCGTTCTTCGAATTCATATGCGGATTCACGATATATTGTAGATTGGAATCAGTGTATATCGTTAGGGTTTTGGTATCCACATGTTTTCTTATATGAAAGTTGCGTGCATTTTGATGAATTTACGGATCTGTTTATGATTTCTGATAGAAATCGAGGAGAGGTACTAAGATTTCGATTGTATGATTCTTTTTTTTTTTTTATTGGTCTTGGAGCTTTTAGTGTCGCTTGATGTCAAATCGATTAGTGCGTATATTGGTTTTTGGACGTGTTTTGATCATTTTTCAAGGCTGGGTGTTCTAGTTTAGTTAATTGAGTGAAGTAGAACTTGCTCAGTCATCAGCATAGATGTGGGTGTTCCTCGGGATTTTTCTTTTTCTCAAACTTTGATCTTGTTGTGTGGATAACTTCTTCGTAATATGAACGTGTACTGAAGCTTTATATTCGGTCATTGACAGAAGTTGAAACATGAAGCTCGATACCAGTGGTCTTCAAACAACAGCTCCGCTGTTTGGGCCAAAAATGGAGTTCATGGAAGGGTTTGCAGCTGCTCCATCCTTTGAGATCCCTAATTCCAGTGACGTAATTTGTAAATCATTTCTCATACGGCTTTCTGGGCTGCATATTGTTCTGTAGAATTGCTTTTTCTGATTTTGATATTCTCCGTGTTTCAGTTTGATGGCTTTCAGAAAGATGCCATTCAAATGGTAAAGCCAGCAAAAGGAACAACCACACTGGCTTTCATTTTTAAGGAAGGAGTCATGGTTGCTGCTGATTCACGTGCCAGCATGGGAGGCTACATATGTATGCTAACTTTAATACATGTGTTCTTCAAACAAATTGTAGATTTAATATCTAGATGTGGTCATGTTTGTATACAATGAACTATAAATTGCTATTTTAAGGTACTCTATCCCTTTAAATGATTAGAAGTTTGGGACTGTGCCCTATAGAGAGAATGTCTTTGCAGTATGATGTGTTTATTCGCATTTTCCTATTTAGATTTGTGCCGGTTGTCCTCCCTCCCCCCATCCTCCATTGTATTGTTAGTTATTATGTTGTTATTTGACTACCTTACTTCGTTTTGAACTAAATATTTGCTATTAAATTTGTTCAGCATCGCAATCTGTGAAGAAAATTATTGAAATTAATCCTTACATGCTTGGTACAATGGCTGGAGGTGCTGCTGATTGTCAGTTTTGGCATAGAAATCTCGGTGTCAAGGTAATTGGCCATTATCCAATAACTTGTAGGACTATCAGCTTTTATTTAGATTGGGTTACCTGGTATTACAAGCGTTAAGATCTCATTACCTTTACTTTTAGAGTTTTCCAGTCCCAACAACTCAACTTGTATGTGCACAATCAGATATTTATTCTTCTCTGTTCAACCAATTGTTCCTTGCCAAGATGATATTTTTTTATTTTTCCCTTGTGGTTAGCAGCTGATCATAATATTTTACATGATTTAGTGCCGCCGACATGAACTAGCAAACAAGCGTCGGATTTCAGTTGCCGGAGCATCAAAATTACTGGCCAATATTCTGTACTCCTATCGTGGAATGGGTCTCTCTGTTGGGACTATGATTGCTGGATGGGATGAAACAGTAATAACATATTTATATATTTTATTTTCTTATTTTATGATGAAAATTGTTAAGATGTTAATTTATTCTCTTATGATCTATAACTTACCTTGATCTGTGTGCATTTTAGGGTCCTGGTCTATATTACGTAGACAGTGAGGGAGGAAGGCTCAAGGGAACAAGATTTTCTGTTGGATCTGGTTCACCTTATGCCTACGGTGTCTTGGATAATGGGTAAGTGTGATCCTCCGTTATCGGTCTGTCTTCGTTATTTCTCAATCCAGTAATTTTCTTATGAACTTCTTATAATATGTTAGGATAAACAAGGTAGTTTTTGAACCGCCATGATTTGGCATGAATGCCTGGTCACATTTTTGCACATGAAAAAGAATATATCAAAAGGAAGGAAAGATAACTCCATGATGAAAAATTGAGCTGAGGTGGCTAGTATAAAAGAACAAAGAAAAAATACATTCTTTCCTCATACTTTTTCTCCCCTTATTTTGAAACAATTGTCCATCTTTTCATCTACTTTAATTTATGGATATTAATTCATGGCAGGTATCGGTACGACTTGTCTGTAGAAGAAGCTGCTGAACTGGCTAGACGAGCGATTTATCATGCAACTTTCCGAGATGGAGCCAGTGGCGGAGTTGCTAGCGGTATGGTATCCCTCTCTGTCAAAATGTTTCCTTGCGTTTGTAATACTCATCTGTGTGCTTGTCCAAATGTTCTCCTCTTGACACTGTGATTTGAATCCCATTGATCAGTTTATTACGTGGGACCAAATGGTTGGAAAAAGCTATCTGGCGATGATGTAGGGGAACTTCATTACAACTACTATCCCGTGACGCCAACTACAGTGGATCAGGAAATGGCTGAAGTAACCGCCGCTTGACGATCCCATATAGACAGACAGACATGAACAGGTTGAGACATTCTCTCTCCCTATTCATTTGTGCTTCTTCTGGGGGGAACTGATTCTAAAGAGATTGCTTTAGATGTGGAGTGTTTTTAAAGTATTATGGGATCCTTAATATGTTTGATTGGATCATTCTGTCCTGTTAGTCGAGTTATAATAGCTGCATGGAGAAGAACATTGTTTGTGTTTCCTAAATTTTAGATCCCTTGCTTCATTGGACTACCTTGCTTATCATGCTTGTTCTTTCCAGTTTAGTGAGCCACGTATCTTCTTTTGT CAAGAAACTGGCCTTCGATTTCCCTGTAAACGTCCTCATTTTTCCCTCCATTCCGATCATTTCCTTCGAGGCAGTGTATCTCCGTTTGGTTGTAGTTCCTGTTTTTTGTTCTCATATTTCCCTAGATTCTAGCTCAAGAAGTTGAAACATGAAGCTCGATACCAGTGGTCTTCAAACAACAGCTCCGCTGTTTGGGCCAAAAATGGAGTTCATGGAAGGGTTTGCAGCTGCTCCATCCTTTGAGATCCCTAATTCCAGTGACGTAATTTGTAAATCATTTCTCATACGGCTTTCTGGGCTGCATATTGTTCTGTAGAATTGCTTTTTCTGATTTTGATATTCTCCGTGTTTCAGTTTGATGGCTTTCAGAAAGATGCCATTCAAATGGTAAAGCCAGCAAAAGGAACAACCACACTGGCTTTCATTTTTAAGGAAGGAGTCATGGTTGCTGCTGATTCACGTGCCAGCATGGGAGGCTACATATCATCGCAATCTGTGAAGAAAATTATTGAAATTAATCCTTACATGCTTGGTACAATGGCTGGAGGTGCTGCTGATTGTCAGTTTTGGCATAGAAATCTCGGTGTCAAGTGCCGCCGACATGAACTAGCAAACAAGCGTCGGATTTCAGTTGCCGGAGCATCAAAATTACTGGCCAATATTCTGTACTCCTATCGTGGAATGGGTCTCTCTGTTGGGACTATGATTGCTGGATGGGATGAAACAGGTCCTGGTCTATATTACGTAGACAGTGAGGGAGGAAGGCTCAAGGGAACAAGATTTTCTGTTGGATCTGGTTCACCTTATGCCTACGGTGTCTTGGATAATGGGTATCGGTACGACTTGTCTGTAGAAGAAGCTGCTGAACTGGCTAGACGAGCGATTTATCATGCAACTTTCCGAGATGGAGCCAGTGGCGGAGTTGCTAGCGTTTATTACGTGGGACCAAATGGTTGGAAAAAGCTATCTGGCGATGATGTAGGGGAACTTCATTACAACTACTATCCCGTGACGCCAACTACAGTGGATCAGGAAATGGCTGAAGTAACCGCCGCTTGACGATCCCATATAGACAGACAGACATGAACAGGTTGAGACATTCTCTCTCCCTATTCATTTGTGCTTCTTCTGGGGGGAACTGATTCTAAAGAGATTGCTTTAGATGTGGAGTGTTTTTAAAGTATTATGGGATCCTTAATATGTTTGATTGGATCATTCTGTCCTGTTAGTCGAGTTATAATAGCTGCATGGAGAAGAACATTGTTTGTGTTTCCTAAATTTTAGATCCCTTGCTTCATTGGACTACCTTGCTTATCATGCTTGTTCTTTCCAGTTTAGTGAGCCACGTATCTTCTTTTGT ATGGTAAAGCCAGCAAAAGGAACAACCACACTGGCTTTCATTTTTAAGGAAGGAGTCATGGTTGCTGCTGATTCACGTGCCAGCATGGGAGGCTACATATCATCGCAATCTGTGAAGAAAATTATTGAAATTAATCCTTACATGCTTGGTACAATGGCTGGAGGTGCTGCTGATTGTCAGTTTTGGCATAGAAATCTCGGTGTCAAGTGCCGCCGACATGAACTAGCAAACAAGCGTCGGATTTCAGTTGCCGGAGCATCAAAATTACTGGCCAATATTCTGTACTCCTATCGTGGAATGGGTCTCTCTGTTGGGACTATGATTGCTGGATGGGATGAAACAGGTCCTGGTCTATATTACGTAGACAGTGAGGGAGGAAGGCTCAAGGGAACAAGATTTTCTGTTGGATCTGGTTCACCTTATGCCTACGGTGTCTTGGATAATGGGTATCGGTACGACTTGTCTGTAGAAGAAGCTGCTGAACTGGCTAGACGAGCGATTTATCATGCAACTTTCCGAGATGGAGCCAGTGGCGGAGTTGCTAGCGTTTATTACGTGGGACCAAATGGTTGGAAAAAGCTATCTGGCGATGATGTAGGGGAACTTCATTACAACTACTATCCCGTGACGCCAACTACAGTGGATCAGGAAATGGCTGAAGTAACCGCCGCTTGA MVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRRHELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYNYYPVTPTTVDQEMAEVTAA
BLAST of Carg09287 vs. NCBI nr
Match: XP_022961789.1 (proteasome subunit beta type-5-like [Cucurbita moschata] >XP_022997234.1 proteasome subunit beta type-5-like [Cucurbita maxima] >XP_022997235.1 proteasome subunit beta type-5-like [Cucurbita maxima]) HSP 1 Score: 455.3 bits (1170), Expect = 1.2e-124 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Carg09287 vs. NCBI nr
Match: XP_023547083.1 (proteasome subunit beta type-5-like [Cucurbita pepo subsp. pepo] >XP_023547084.1 proteasome subunit beta type-5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 455.3 bits (1170), Expect = 1.2e-124 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Carg09287 vs. NCBI nr
Match: XP_008445492.1 (PREDICTED: proteasome subunit beta type-5 [Cucumis melo]) HSP 1 Score: 453.8 bits (1166), Expect = 3.5e-124 Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Carg09287 vs. NCBI nr
Match: XP_004144192.1 (PREDICTED: proteasome subunit beta type-5 [Cucumis sativus] >KGN47623.1 hypothetical protein Csa_6G365720 [Cucumis sativus]) HSP 1 Score: 449.5 bits (1155), Expect = 6.6e-123 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Carg09287 vs. NCBI nr
Match: XP_023002170.1 (proteasome subunit beta type-5 isoform X2 [Cucurbita maxima]) HSP 1 Score: 449.1 bits (1154), Expect = 8.6e-123 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Carg09287 vs. TAIR10
Match: AT3G26340.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein) HSP 1 Score: 410.2 bits (1053), Expect = 8.1e-115 Identity = 197/220 (89.55%), Postives = 210/220 (95.45%), Query Frame = 0
BLAST of Carg09287 vs. TAIR10
Match: AT1G13060.2 (20S proteasome beta subunit E1) HSP 1 Score: 396.4 bits (1017), Expect = 1.2e-110 Identity = 198/247 (80.16%), Postives = 211/247 (85.43%), Query Frame = 0
BLAST of Carg09287 vs. TAIR10
Match: AT4G31300.2 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein) HSP 1 Score: 96.3 bits (238), Expect = 2.6e-20 Identity = 56/185 (30.27%), Postives = 96/185 (51.89%), Query Frame = 0
BLAST of Carg09287 vs. TAIR10
Match: AT5G40580.1 (20S proteasome beta subunit PBB2) HSP 1 Score: 79.3 bits (194), Expect = 3.3e-15 Identity = 56/172 (32.56%), Postives = 86/172 (50.00%), Query Frame = 0
BLAST of Carg09287 vs. TAIR10
Match: AT3G27430.2 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein) HSP 1 Score: 77.8 bits (190), Expect = 9.5e-15 Identity = 55/172 (31.98%), Postives = 86/172 (50.00%), Query Frame = 0
BLAST of Carg09287 vs. Swiss-Prot
Match: sp|O24361|PSB5_SPIOL (Proteasome subunit beta type-5 OS=Spinacia oleracea OX=3562 PE=2 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 1.6e-115 Identity = 199/224 (88.84%), Postives = 213/224 (95.09%), Query Frame = 0
BLAST of Carg09287 vs. Swiss-Prot
Match: sp|Q9LIP2|PSB5B_ARATH (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana OX=3702 GN=PBE2 PE=1 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 1.5e-113 Identity = 197/220 (89.55%), Postives = 210/220 (95.45%), Query Frame = 0
BLAST of Carg09287 vs. Swiss-Prot
Match: sp|O23717|PSB5A_ARATH (Proteasome subunit beta type-5-A OS=Arabidopsis thaliana OX=3702 GN=PBE1 PE=1 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 1.9e-113 Identity = 198/223 (88.79%), Postives = 211/223 (94.62%), Query Frame = 0
BLAST of Carg09287 vs. Swiss-Prot
Match: sp|P28074|PSB5_HUMAN (Proteasome subunit beta type-5 OS=Homo sapiens OX=9606 GN=PSMB5 PE=1 SV=3) HSP 1 Score: 289.3 bits (739), Expect = 3.7e-77 Identity = 138/205 (67.32%), Postives = 165/205 (80.49%), Query Frame = 0
BLAST of Carg09287 vs. Swiss-Prot
Match: sp|Q5R8S2|PSB5_PONAB (Proteasome subunit beta type-5 OS=Pongo abelii OX=9601 GN=PSMB5 PE=2 SV=3) HSP 1 Score: 289.3 bits (739), Expect = 3.7e-77 Identity = 138/205 (67.32%), Postives = 165/205 (80.49%), Query Frame = 0
BLAST of Carg09287 vs. TrEMBL
Match: tr|A0A1S3BCV3|A0A1S3BCV3_CUCME (Proteasome subunit beta type OS=Cucumis melo OX=3656 GN=LOC103488492 PE=3 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 2.3e-124 Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Carg09287 vs. TrEMBL
Match: tr|A0A0A0KDM0|A0A0A0KDM0_CUCSA (Proteasome subunit beta type OS=Cucumis sativus OX=3659 GN=Csa_6G365720 PE=3 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 4.4e-123 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Carg09287 vs. TrEMBL
Match: tr|I1KC47|I1KC47_SOYBN (Proteasome subunit beta type OS=Glycine max OX=3847 GN=100779240 PE=3 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 5.9e-120 Identity = 214/224 (95.54%), Postives = 219/224 (97.77%), Query Frame = 0
BLAST of Carg09287 vs. TrEMBL
Match: tr|I1JXI9|I1JXI9_SOYBN (Proteasome subunit beta type OS=Glycine max OX=3847 GN=100778498 PE=3 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 5.9e-120 Identity = 214/224 (95.54%), Postives = 219/224 (97.77%), Query Frame = 0
BLAST of Carg09287 vs. TrEMBL
Match: tr|A0A0B2QPF9|A0A0B2QPF9_GLYSO (Proteasome subunit beta type OS=Glycine soja OX=3848 GN=glysoja_040249 PE=3 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 5.9e-120 Identity = 214/224 (95.54%), Postives = 219/224 (97.77%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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