Carg09286 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09286
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	60S ribosomal protein L5-like
Location	Cucurbita_argyrosperma_scaffold_018 : 400750 .. 403798 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGACGAGGGCAAAGTCGAGGCGGGCTATGTTTCAAGGTGTGTGATTTGCGTGCTTACAACCAGGGTGAGTTTATTAAGCTCGGAATAAGAAAAAATAATATTTTTATGATTTAAAATTTATTAGAGGCGACACAAAATTTAAAATTAATAGAGAAAAAAAAAATTGTGGAATTTAGGCATTTTTAAAAGTTTATAAATTATTTTTATAATTCAACCAATAAAACAGCTACAAATGTCAATAAATAATTTACTCGAACAGTGTAGTAAAAAAAAAAAAAAAAAAAAAAGAAAACGGAACGATCTGAGCCGTTGATCACGTCGCCTTAGGGTTATATAAATAGAAGAATCCTTCGTCCGAAAAACTTCTCTGATTGCTTCGGTCGTGTCCGCGTCTCTCATTCTCTCAGTTTACTTCGGGCCTCAGCTTCGGAGATGGTGAGTTTATGCTCAACTTCTAATGATTATTCTCTTCATTTTATAGCGTTCTTGAATCTCAGATGAATTTTAGCTTTCAGCCAAGACAATGATACAGAAGTTAGCTGCATTGCATACTCATTTTCCGTTCTTAAACAAATTTCACGAGGATCTGAACGCTGCATTTGCTTTCATTTCGGGAATATTCTTGCATTGAATTGATATGCGCCGTAGTTTAGTTGAGTTGTTTTGGAAAATATTGTTACTTATTTACAATTTTTGTTTCTGAGTTTTTAATTCAAGTATATAGGAATTCTAAGTCGTATATATAGTTCTATGTGAATTGTCCCTAAGATGTTTGAGACCTTCAAAGGTTTTTGGGAATGATTGAAGCAAGTTACTGCCGTCGTTTCTCTTAATTTTGTTATCAGCGTTCGTATCATTATTGCTCCGAGTAATCGACGTGATTTAATAATTGTTTTTTGCAGGCTTTCGCAAAAGCTCAAAAGACGAAAGCGTACTTCAAACGCTACCAGGTCAAATACAAGAGAAGAAGAGGTATTTCCAATCTCTTTTTTGTTCATCACGATGAATCATATTTGAATAGTTAATTGTCGGCTTCTGATAGTGCTCTCTTCTGATAATGTATAGAGGGCAAGACCGATTATCGGGCCAGGATTCGCCTCATTAATCAAGACAAGAACAAGTACAATACTCCCAAATACCGCTTTGTGATTAGATTTGTATCCTCATTCCGTTGTCTAAGTAGTGCAAGTGGTCTTTTGTGTTATTTTCCAGTTATTTCTTGATGAACTTGCAATGAGTGGTTTTGTTCTTCCTTAATTTGCCAGTCCTGAATTTTGTGTAACTACCTTTGAATACGTTTGCCGTTACTATCTATCATTACTTTTTTATGAGTATTTTTTATTATGAAGGGTGAGCTGTGGTTATGTTCACTTGAGAAACGGGAACCTTAACATTCATATCTAGACTAACAAGGATATTACCGCACAAGTAGTATCTTCTAGCATTGCTGGTGACATGGTTCTTGCCGCCGCTTATTCTCATGAGTTGCCTCATTATGGTCTTGATGTTGGTCTAACAAATTATGCAGCAGGTACTACTTTTGTAATGTAAGTCTCTCGGGGGCTGAGTTTTTGATCTGTTACTAACTTCTTATCCCTATCTTCATTTGTCCGGAATGGTGTATGACACTTGTTTAGCCTATTGTACTGGGCTTCTCTTGGCTCGCCGTGTCTTGAAGAAGCTTGAGATGGATGATGAGTACGTGGGTAATCTTGAGGTATCCTATCCACGCCCTCCATCACCATATAGAAAAGAGAAATTGAAAGCAAAATTAAATGAAGTTCACCTCTTCTGTTATGGCTTATGCCCCTAAAATTAAAACTTTTATCAACTGAAAGTGGTTTTATAAATCAGGTTTCTGGAGAGGATTTCTCTGTGGAACCTACAGATAGCCGAAGGCCTTTCAGAGCCCTCCTTGATGTTGGTCTTGTCCGAACAACAACAGGAAATCGTGTTTTTGGTGCCCTCAAGGTATATTTAGTTAGTCCATCTAATATCAGCTGCAAGATCCGTTATGGTAGTTTATACGGTTTGGTTGACTTTACATGAGTGGTTTTAGCTATTTTTTTAAACCATGGCTGGATACAAAATGAGTAATAATATATCTTGTTAAACCAATTCTATGTATGTAACATATGTATAAGGGTGTATTTGACGCACATATTTCTGTATTTTGTTCTAACATCTGGTCAGTCCACGTTTGAGCTTCAGTATTCGTGATAATTTAACTGCTGATTATAGTTACGATGAGAAGTTTTTAAGTTCGATGTAGTAACTGATTGCATCATAATCTGGAAGGTTGCGAATTTCGTACTGGGAAACTTTATCTAACATGTATCCGCGTTCTTCATAATGTCGGTGGCTCTTGGTATCTTTTATCAAGCTGTTGTATTTTTGGAGACTGAAGCTATGAATTTTCACGTCACACAGGGAGCTTTAGATGGTGGATTGGATGTTCCACACAGTGTCAAGAGGTTTGCTGGTTTTTCAAAGGACAGCAAGGAGCTCGATGCGGATGTTCATCGTAAATACATATTTGGAGGGCACGTTGCAGCCTATATGAGGGTAAACGTTCAGAATTTAATATTAGAGCATAGTAAAATTAGAATAGACATTAGTATTCAGTCATGAAGGATTGTGTTCACTCTCGAGTTGTATTCCTCAGTCCTTGATGGAGGATGAGCCGGAGAAGTATCAATCTCAATTCAGTGATTATATCAAGAAAGGGATCGAGCCCGACAACATCGAGGAGTTATTGAAAAAAGTTCATTCTGCAATTCGTACTGAACCACTTGCAAAGACGACTGTGAAGCAACCACCAAAAGAGCACAAGAGGTTATTGTCTAACTCTCTATGTTTCTCATGAATGAACTATCATTTTAGTTTCTGGTTTTCCATACTTACGCGGTTCGTCCGATAGGTATAACCTGAAGAAGCTCACATATGATGAAAGGAGGGCCAAGTTGGTCGAGCGTTTGAATGCATTGAATTCTGCTGCTGGAGCTGATGACGATGACGATGACGATGAAGAGGATGAAGAGTGA

mRNA sequence

ATGATGGACGAGGGCAAAGTCGAGGCGGGCTATGTTTCAAGGTGTGTGATTTGCGTGCTTACAACCAGGGCTTTCGCAAAAGCTCAAAAGACGAAAGCGTACTTCAAACGCTACCAGGTCAAATACAAGAGAAGAAGAGAGGGCAAGACCGATTATCGGGCCAGGATTCGCCTCATTAATCAAGACAAGAACAAGTACAATACTCCCAAATACCGCTTTGTGATTAGATTTGTATCCTCATTCCGTTGTCTAAGTAGTGCAAGTGGTCTTTTGTGTTATTTTCCAACTAACAAGGATATTACCGCACAAGTAGTATCTTCTAGCATTGCTGGTGACATGGTTCTTGCCGCCGCTTATTCTCATGAGTTGCCTCATTATGGTCTTGATGTTGGTCTAACAAATTATGCAGCAGCCTATTGTACTGGGCTTCTCTTGGCTCGCCGTGTCTTGAAGAAGCTTGAGATGGATGATGAGTACGTGGGTAATCTTGAGGTTTCTGGAGAGGATTTCTCTGTGGAACCTACAGATAGCCGAAGGCCTTTCAGAGCCCTCCTTGATGTTGGTCTTGTCCGAACAACAACAGGAAATCGTGTTTTTGGTGCCCTCAAGGGAGCTTTAGATGGTGGATTGGATGTTCCACACAGTGTCAAGAGGTTTGCTGGTTTTTCAAAGGACAGCAAGGAGCTCGATGCGGATGTTCATCGTAAATACATATTTGGAGGGCACGTTGCAGCCTATATGAGGTCCTTGATGGAGGATGAGCCGGAGAAGTATCAATCTCAATTCAGTGATTATATCAAGAAAGGGATCGAGCCCGACAACATCGAGGAGTTATTGAAAAAAGTTCATTCTGCAATTCGTACTGAACCACTTGCAAAGACGACTGTGAAGCAACCACCAAAAGAGCACAAGAGGTATAACCTGAAGAAGCTCACATATGATGAAAGGAGGGCCAAGTTGGTCGAGCGTTTGAATGCATTGAATTCTGCTGCTGGAGCTGATGACGATGACGATGACGATGAAGAGGATGAAGAGTGA

Coding sequence (CDS)

ATGATGGACGAGGGCAAAGTCGAGGCGGGCTATGTTTCAAGGTGTGTGATTTGCGTGCTTACAACCAGGGCTTTCGCAAAAGCTCAAAAGACGAAAGCGTACTTCAAACGCTACCAGGTCAAATACAAGAGAAGAAGAGAGGGCAAGACCGATTATCGGGCCAGGATTCGCCTCATTAATCAAGACAAGAACAAGTACAATACTCCCAAATACCGCTTTGTGATTAGATTTGTATCCTCATTCCGTTGTCTAAGTAGTGCAAGTGGTCTTTTGTGTTATTTTCCAACTAACAAGGATATTACCGCACAAGTAGTATCTTCTAGCATTGCTGGTGACATGGTTCTTGCCGCCGCTTATTCTCATGAGTTGCCTCATTATGGTCTTGATGTTGGTCTAACAAATTATGCAGCAGCCTATTGTACTGGGCTTCTCTTGGCTCGCCGTGTCTTGAAGAAGCTTGAGATGGATGATGAGTACGTGGGTAATCTTGAGGTTTCTGGAGAGGATTTCTCTGTGGAACCTACAGATAGCCGAAGGCCTTTCAGAGCCCTCCTTGATGTTGGTCTTGTCCGAACAACAACAGGAAATCGTGTTTTTGGTGCCCTCAAGGGAGCTTTAGATGGTGGATTGGATGTTCCACACAGTGTCAAGAGGTTTGCTGGTTTTTCAAAGGACAGCAAGGAGCTCGATGCGGATGTTCATCGTAAATACATATTTGGAGGGCACGTTGCAGCCTATATGAGGTCCTTGATGGAGGATGAGCCGGAGAAGTATCAATCTCAATTCAGTGATTATATCAAGAAAGGGATCGAGCCCGACAACATCGAGGAGTTATTGAAAAAAGTTCATTCTGCAATTCGTACTGAACCACTTGCAAAGACGACTGTGAAGCAACCACCAAAAGAGCACAAGAGGTATAACCTGAAGAAGCTCACATATGATGAAAGGAGGGCCAAGTTGGTCGAGCGTTTGAATGCATTGAATTCTGCTGCTGGAGCTGATGACGATGACGATGACGATGAAGAGGATGAAGAGTGA

Protein sequence

MMDEGKVEAGYVSRCVICVLTTRAFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRCLSSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGLLLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFSDYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVERLNALNSAAGADDDDDDDEEDEE

Homology

[Close]

BLAST of Carg09286 vs. NCBI nr
Match: XP_022961788.1 (60S ribosomal protein L5-like [Cucurbita moschata])

HSP 1 Score: 551.2 bits (1419), Expect = 2.5e-153
Identity = 286/305 (93.77%), Postives = 286/305 (93.77%), Query Frame = 0


Query: 24  AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRC 83
           AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 84  LSSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL 143
                       TNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL
Sbjct: 62  ------------TNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL 121

Query: 144 LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 203
           LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK
Sbjct: 122 LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 181

Query: 204 GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFS 263
           GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFS
Sbjct: 182 GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFS 241

Query: 264 DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVER 323
           DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPK HKRYNLKKLTYDERRAKLVER
Sbjct: 242 DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKGHKRYNLKKLTYDERRAKLVER 288

Query: 324 LNALN 329
           LNALN
Sbjct: 302 LNALN 288

[Close]

BLAST of Carg09286 vs. NCBI nr
Match: XP_022997223.1 (60S ribosomal protein L5-like [Cucurbita maxima])

HSP 1 Score: 548.1 bits (1411), Expect = 2.1e-152
Identity = 283/305 (92.79%), Postives = 285/305 (93.44%), Query Frame = 0


Query: 24  AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRC 83
           AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 84  LSSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL 143
                       TNKDITAQ+VSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL
Sbjct: 62  ------------TNKDITAQIVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL 121

Query: 144 LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 203
           LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK
Sbjct: 122 LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 181

Query: 204 GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFS 263
           GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGH+AAYMRSLMEDEPEKYQSQFS
Sbjct: 182 GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHIAAYMRSLMEDEPEKYQSQFS 241

Query: 264 DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVER 323
           DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQP KEHKRYNLKKLTYDERR KLVER
Sbjct: 242 DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPRKEHKRYNLKKLTYDERRVKLVER 288

Query: 324 LNALN 329
           LNALN
Sbjct: 302 LNALN 288

[Close]

BLAST of Carg09286 vs. NCBI nr
Match: XP_023547082.1 (60S ribosomal protein L5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 548.1 bits (1411), Expect = 2.1e-152
Identity = 286/306 (93.46%), Postives = 287/306 (93.79%), Query Frame = 0


Query: 24  AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRC 83
           AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYR+VIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRYVIRF------ 61

Query: 84  LSSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL 143
                       TNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL
Sbjct: 62  ------------TNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL 121

Query: 144 LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 203
           LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK
Sbjct: 122 LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 181

Query: 204 GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFS 263
           GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFS
Sbjct: 182 GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFS 241

Query: 264 DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPK-EHKRYNLKKLTYDERRAKLVE 323
           DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPK EHKRYNLKKLTYDERRAKLVE
Sbjct: 242 DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEEHKRYNLKKLTYDERRAKLVE 289

Query: 324 RLNALN 329
           RLNALN
Sbjct: 302 RLNALN 289

[Close]

BLAST of Carg09286 vs. NCBI nr
Match: XP_022131844.1 (60S ribosomal protein L5-like [Momordica charantia])

HSP 1 Score: 523.9 bits (1348), Expect = 4.2e-145
Identity = 268/305 (87.87%), Postives = 280/305 (91.80%), Query Frame = 0


Query: 24  AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRC 83
           AFAKAQKTKAYFKRYQVKYKRRR+GKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKYKRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 84  LSSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL 143
                       TNKDITAQ+VSSSIAGDMVLAAAYSHELPHYGL+VGLTNYAAAYCTGL
Sbjct: 62  ------------TNKDITAQIVSSSIAGDMVLAAAYSHELPHYGLEVGLTNYAAAYCTGL 121

Query: 144 LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 203
           LLARRVLK LEMD EY GNLEV+GEDFSVEPTD+RRPFRALLDVGLVRTTTGNRVFGALK
Sbjct: 122 LLARRVLKSLEMDKEYEGNLEVTGEDFSVEPTDNRRPFRALLDVGLVRTTTGNRVFGALK 181

Query: 204 GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFS 263
           GALDGGLDVPHSVKRFAGFSKD+KELDA+VHRKYIFGGHVAAYMRSLMEDEPEKYQS FS
Sbjct: 182 GALDGGLDVPHSVKRFAGFSKDNKELDAEVHRKYIFGGHVAAYMRSLMEDEPEKYQSHFS 241

Query: 264 DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVER 323
           DYIKKGIEPDNIEELLKKVH+AIR+EPL K T KQPPKEHKR+NLKKLTY+ER+AKLVER
Sbjct: 242 DYIKKGIEPDNIEELLKKVHAAIRSEPLVKKTEKQPPKEHKRFNLKKLTYEERKAKLVER 288

Query: 324 LNALN 329
           LNALN
Sbjct: 302 LNALN 288

[Close]

BLAST of Carg09286 vs. NCBI nr
Match: XP_008445491.1 (PREDICTED: 60S ribosomal protein L5-like [Cucumis melo])

HSP 1 Score: 522.7 bits (1345), Expect = 9.5e-145
Identity = 267/305 (87.54%), Postives = 280/305 (91.80%), Query Frame = 0


Query: 24  AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRC 83
           AFAKAQKTKAYFKRYQVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 84  LSSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL 143
                       TNKDITAQ+VSSSIAGDMVLA+AYSHELPHYGL+VGLTNYAAAYCTGL
Sbjct: 62  ------------TNKDITAQIVSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGL 121

Query: 144 LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 203
           LLARRVLKKLEMDDEY GNLE +GED+SVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK
Sbjct: 122 LLARRVLKKLEMDDEYEGNLEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 181

Query: 204 GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFS 263
           GALDGGLDVPHSVKRFAGFSK + EL+ADVHRKYIFGGHVAAYMR+LMEDEPEKYQ+QFS
Sbjct: 182 GALDGGLDVPHSVKRFAGFSKGNNELNADVHRKYIFGGHVAAYMRTLMEDEPEKYQTQFS 241

Query: 264 DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVER 323
           DYIKKGIEPDNIEELLKKVHSAIR EPLAKTT KQPPK HKRYNLKKLTY++R+AKLVER
Sbjct: 242 DYIKKGIEPDNIEELLKKVHSAIRAEPLAKTTEKQPPKTHKRYNLKKLTYEQRKAKLVER 288

Query: 324 LNALN 329
           LNALN
Sbjct: 302 LNALN 288

[Close]

BLAST of Carg09286 vs. TAIR10
Match: AT3G25520.1 (ribosomal protein L5)

HSP 1 Score: 446.8 bits (1148), Expect = 1.2e-125
Identity = 223/304 (73.36%), Postives = 257/304 (84.54%), Query Frame = 0


Query: 25  FAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRCL 84
           F K+ K+ AYFKRYQVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFV+RF       
Sbjct: 3   FVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF------- 62

Query: 85  SSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGLL 144
                      TNKDI AQ+VS+SIAGD+V A+AY+HELP YGL VGLTNYAAAYCTGLL
Sbjct: 63  -----------TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLL 122

Query: 145 LARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKG 204
           LARRVLK LEMDDEY GN+E +GEDFSVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKG
Sbjct: 123 LARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKG 182

Query: 205 ALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFSD 264
           ALDGGLD+PHS KRFAGF K++K+LDA++HR YI+GGHV+ YM+ L EDEPEK Q+ FS 
Sbjct: 183 ALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSA 242

Query: 265 YIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVERL 324
           YIKKG+E ++IEEL KKVH+AIR +P  K TVK  PK+HKRYNLKKLTY+ER+ KL+ER+
Sbjct: 243 YIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERV 288

Query: 325 NALN 329
            ALN
Sbjct: 303 KALN 288

[Close]

BLAST of Carg09286 vs. TAIR10
Match: AT5G39740.1 (ribosomal protein L5 B)

HSP 1 Score: 446.4 bits (1147), Expect = 1.6e-125
Identity = 223/304 (73.36%), Postives = 256/304 (84.21%), Query Frame = 0


Query: 25  FAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRCL 84
           F K+ K+ AYFKRYQVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFV+RF       
Sbjct: 3   FVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF------- 62

Query: 85  SSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGLL 144
                      TNKDI AQ+VS+SIAGD+V A+AY+HELP YGL VGLTNYAAAYCTGLL
Sbjct: 63  -----------TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLL 122

Query: 145 LARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKG 204
           LARRVLK LEMDDEY GN+E +GEDFSVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKG
Sbjct: 123 LARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKG 182

Query: 205 ALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFSD 264
           ALDGGLD+PHS KRFAGF K++K+LDA++HR YI+GGHV+ YM+ L EDEPEK Q+ FS 
Sbjct: 183 ALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSA 242

Query: 265 YIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVERL 324
           YIKKG+E ++IEE+ KKVH+AIR EP  K T K  PKEHKRYNLKKLTY+ER+ KL+ER+
Sbjct: 243 YIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERV 288

Query: 325 NALN 329
            ALN
Sbjct: 303 KALN 288

[Close]

BLAST of Carg09286 vs. Swiss-Prot
Match: sp|Q6UNT2|RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=RPL5 PE=2 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 2.0e-130
Identity = 234/303 (77.23%), Postives = 263/303 (86.80%), Query Frame = 0


Query: 24  AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRC 83
           AFAKAQKTKAYFKRYQVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFV+R       
Sbjct: 2   AFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR------- 61

Query: 84  LSSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL 143
                       +NKDITAQ++S+SIAGD+VLA+AYSHELP YGL+VGLTNYAAAYCTGL
Sbjct: 62  -----------TSNKDITAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGL 121

Query: 144 LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 203
           LLARRVLK LEMD EY GN+E +GED+SVEP D+RRPFRALLDVGL+RTTTGNRVFGALK
Sbjct: 122 LLARRVLKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALK 181

Query: 204 GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFS 263
           GALDGGLD+PHS KRFAG++K+ ++LD +VHRKYIFGGHVAAYMR+LMEDEPEKYQS FS
Sbjct: 182 GALDGGLDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFS 241

Query: 264 DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVER 323
           +YIKKGIE D +E L KKVH+AIR  P+AK + K  PK HKRYNLKKLTYDER+A+LVER
Sbjct: 242 EYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVER 286

Query: 324 LNA 327
           LNA
Sbjct: 302 LNA 286

[Close]

BLAST of Carg09286 vs. Swiss-Prot
Match: sp|Q8LBI1|RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=1 SV=2)

HSP 1 Score: 446.8 bits (1148), Expect = 2.2e-124
Identity = 223/304 (73.36%), Postives = 257/304 (84.54%), Query Frame = 0


Query: 25  FAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRCL 84
           F K+ K+ AYFKRYQVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFV+RF       
Sbjct: 3   FVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF------- 62

Query: 85  SSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGLL 144
                      TNKDI AQ+VS+SIAGD+V A+AY+HELP YGL VGLTNYAAAYCTGLL
Sbjct: 63  -----------TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLL 122

Query: 145 LARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKG 204
           LARRVLK LEMDDEY GN+E +GEDFSVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKG
Sbjct: 123 LARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKG 182

Query: 205 ALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFSD 264
           ALDGGLD+PHS KRFAGF K++K+LDA++HR YI+GGHV+ YM+ L EDEPEK Q+ FS 
Sbjct: 183 ALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSA 242

Query: 265 YIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVERL 324
           YIKKG+E ++IEEL KKVH+AIR +P  K TVK  PK+HKRYNLKKLTY+ER+ KL+ER+
Sbjct: 243 YIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERV 288

Query: 325 NALN 329
            ALN
Sbjct: 303 KALN 288

[Close]

BLAST of Carg09286 vs. Swiss-Prot
Match: sp|P49227|RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana OX=3702 GN=RPL5B PE=2 SV=3)

HSP 1 Score: 446.4 bits (1147), Expect = 2.8e-124
Identity = 223/304 (73.36%), Postives = 256/304 (84.21%), Query Frame = 0


Query: 25  FAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRCL 84
           F K+ K+ AYFKRYQVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFV+RF       
Sbjct: 3   FVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF------- 62

Query: 85  SSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGLL 144
                      TNKDI AQ+VS+SIAGD+V A+AY+HELP YGL VGLTNYAAAYCTGLL
Sbjct: 63  -----------TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLL 122

Query: 145 LARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKG 204
           LARRVLK LEMDDEY GN+E +GEDFSVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKG
Sbjct: 123 LARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKG 182

Query: 205 ALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFSD 264
           ALDGGLD+PHS KRFAGF K++K+LDA++HR YI+GGHV+ YM+ L EDEPEK Q+ FS 
Sbjct: 183 ALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSA 242

Query: 265 YIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVERL 324
           YIKKG+E ++IEE+ KKVH+AIR EP  K T K  PKEHKRYNLKKLTY+ER+ KL+ER+
Sbjct: 243 YIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERV 288

Query: 325 NALN 329
            ALN
Sbjct: 303 KALN 288

[Close]

BLAST of Carg09286 vs. Swiss-Prot
Match: sp|A2WXX3|RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica OX=39946 GN=RPL5A PE=3 SV=2)

HSP 1 Score: 436.8 bits (1122), Expect = 2.2e-121
Identity = 215/304 (70.72%), Postives = 251/304 (82.57%), Query Frame = 0


Query: 25  FAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRCL 84
           F K QKT AY+KR+QVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFV+RF       
Sbjct: 4   FVKTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRF------- 63

Query: 85  SSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGLL 144
                      TNKDITAQ+V ++IAGD+V+AAAYSHELP YGL+VGLTNYAAAYCTGLL
Sbjct: 64  -----------TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLL 123

Query: 145 LARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKG 204
           LARRVLK   +D EY GN+E +GED+ VEP D RRPFRALLDVGL+RTTTGNRVFGALKG
Sbjct: 124 LARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKG 183

Query: 205 ALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFSD 264
           ALDGGLD+PHS KRFAGF KD K+LD+D+HRKYI+GGHVA YMRS+ E+EPEK+Q+ FS+
Sbjct: 184 ALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSE 243

Query: 265 YIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVERL 324
           Y+KKGI+ D +E L KKVH+AIR +P    + K+ P  HKRYNLKKLTY++R+A LVERL
Sbjct: 244 YLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERL 289

Query: 325 NALN 329
           NALN
Sbjct: 304 NALN 289

[Close]

BLAST of Carg09286 vs. Swiss-Prot
Match: sp|Q0JGY1|RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5A PE=2 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 6.5e-121
Identity = 215/304 (70.72%), Postives = 250/304 (82.24%), Query Frame = 0


Query: 25  FAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRCL 84
           F K QKT AY KR+QVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFV+RF       
Sbjct: 4   FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRF------- 63

Query: 85  SSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGLL 144
                      TNKDITAQ+V ++IAGD+V+AAAYSHELP YGL+VGLTNYAAAYCTGLL
Sbjct: 64  -----------TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLL 123

Query: 145 LARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKG 204
           LARRVLK   +D EY GN+E +GED+ VEP D RRPFRALLDVGL+RTTTGNRVFGALKG
Sbjct: 124 LARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKG 183

Query: 205 ALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFSD 264
           ALDGGLD+PHS KRFAGF KD K+LD+D+HRKYI+GGHVA YMRS+ E+EPEK+Q+ FS+
Sbjct: 184 ALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSE 243

Query: 265 YIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVERL 324
           Y+KKGI+ D +E L KKVH+AIR +P    + K+ P  HKRYNLKKLTY++R+A LVERL
Sbjct: 244 YLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERL 289

Query: 325 NALN 329
           NALN
Sbjct: 304 NALN 289

[Close]

BLAST of Carg09286 vs. TrEMBL
Match: tr|A0A1S3BCD6|A0A1S3BCD6_CUCME (60S ribosomal protein L5-like OS=Cucumis melo OX=3656 GN=LOC103488491 PE=3 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 6.3e-145
Identity = 267/305 (87.54%), Postives = 280/305 (91.80%), Query Frame = 0


Query: 24  AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRC 83
           AFAKAQKTKAYFKRYQVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 84  LSSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL 143
                       TNKDITAQ+VSSSIAGDMVLA+AYSHELPHYGL+VGLTNYAAAYCTGL
Sbjct: 62  ------------TNKDITAQIVSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGL 121

Query: 144 LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 203
           LLARRVLKKLEMDDEY GNLE +GED+SVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK
Sbjct: 122 LLARRVLKKLEMDDEYEGNLEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 181

Query: 204 GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFS 263
           GALDGGLDVPHSVKRFAGFSK + EL+ADVHRKYIFGGHVAAYMR+LMEDEPEKYQ+QFS
Sbjct: 182 GALDGGLDVPHSVKRFAGFSKGNNELNADVHRKYIFGGHVAAYMRTLMEDEPEKYQTQFS 241

Query: 264 DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVER 323
           DYIKKGIEPDNIEELLKKVHSAIR EPLAKTT KQPPK HKRYNLKKLTY++R+AKLVER
Sbjct: 242 DYIKKGIEPDNIEELLKKVHSAIRAEPLAKTTEKQPPKTHKRYNLKKLTYEQRKAKLVER 288

Query: 324 LNALN 329
           LNALN
Sbjct: 302 LNALN 288

[Close]

BLAST of Carg09286 vs. TrEMBL
Match: tr|A0A0A0KFL3|A0A0A0KFL3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G365730 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.0e-142
Identity = 263/305 (86.23%), Postives = 277/305 (90.82%), Query Frame = 0


Query: 24  AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRC 83
           AFAKAQKTKAYFKRYQVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVIR       
Sbjct: 2   AFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRI------ 61

Query: 84  LSSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL 143
                       TNKDITAQ+VSSSIAGDM+LAAAYSHELP YGL+VGLTNYAAAYCTGL
Sbjct: 62  ------------TNKDITAQIVSSSIAGDMILAAAYSHELPRYGLEVGLTNYAAAYCTGL 121

Query: 144 LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 203
           L+ARRVLKKLEMDDEY GNLE +GED+SVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK
Sbjct: 122 LVARRVLKKLEMDDEYEGNLEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 181

Query: 204 GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFS 263
           GALDGGLDVPHSVKRFAGFSK + EL+ADVHRKYIFGGHVAAYMR+LMEDEPEKYQ+QFS
Sbjct: 182 GALDGGLDVPHSVKRFAGFSKGNNELNADVHRKYIFGGHVAAYMRTLMEDEPEKYQTQFS 241

Query: 264 DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVER 323
           DYIKKGIEPDNIEELLKKVHSAIR EPL KTT KQPPK HKRYNLKKLTY++R+AKLVER
Sbjct: 242 DYIKKGIEPDNIEELLKKVHSAIRAEPLVKTTEKQPPKTHKRYNLKKLTYEQRKAKLVER 288

Query: 324 LNALN 329
           LNALN
Sbjct: 302 LNALN 288

[Close]

BLAST of Carg09286 vs. TrEMBL
Match: tr|A0A2G9G1C1|A0A2G9G1C1_9LAMI (60S ribosomal protein L5 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28385 PE=3 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 2.2e-134
Identity = 242/305 (79.34%), Postives = 269/305 (88.20%), Query Frame = 0


Query: 24  AFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRC 83
           AF KAQK+KAYFKR+QVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFV+RF      
Sbjct: 2   AFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRF------ 61

Query: 84  LSSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGL 143
                       TNKDI AQ+VS+SI GDMVLA+AY+HELPHYGLD GLTNYAAAYCTGL
Sbjct: 62  ------------TNKDIIAQIVSASITGDMVLASAYAHELPHYGLDAGLTNYAAAYCTGL 121

Query: 144 LLARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 203
           LLARRVLK LEMDDEY GNLE +GED+SVEP++SRRPFRALLDVGL+RTTTGNRVFGALK
Sbjct: 122 LLARRVLKSLEMDDEYQGNLEATGEDYSVEPSESRRPFRALLDVGLLRTTTGNRVFGALK 181

Query: 204 GALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFS 263
           GALDGGLD+PHS KRFAGFSKDSK+LDA+VHRKYI+GGHVA+YM +LMEDEPEKYQS FS
Sbjct: 182 GALDGGLDIPHSDKRFAGFSKDSKQLDAEVHRKYIYGGHVASYMTTLMEDEPEKYQSHFS 241

Query: 264 DYIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVER 323
            Y+KKG+EPD +EEL KKVHSAIR +P +K + KQPPKEHKRYNLKKLTY+ER+AKL+ER
Sbjct: 242 RYVKKGLEPDGLEELYKKVHSAIRADPTSKKSEKQPPKEHKRYNLKKLTYEERKAKLIER 288

Query: 324 LNALN 329
           LN LN
Sbjct: 302 LNGLN 288

[Close]

BLAST of Carg09286 vs. TrEMBL
Match: tr|A0A2R6QSP7|A0A2R6QSP7_ACTCH (60S ribosomal protein like (Fragment) OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc14766 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 5.0e-134
Identity = 241/304 (79.28%), Postives = 269/304 (88.49%), Query Frame = 0


Query: 25  FAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRCL 84
           F K+QK++AYFKR+QVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFV+RF       
Sbjct: 2   FVKSQKSRAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRF------- 61

Query: 85  SSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGLL 144
                      TNKDI AQ+VS+SIAGDMVLAAAY+HELPHYGLD GLTNYAAAYCTGLL
Sbjct: 62  -----------TNKDIVAQIVSASIAGDMVLAAAYAHELPHYGLDTGLTNYAAAYCTGLL 121

Query: 145 LARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKG 204
           LARRVLK+LEMDDEY GN+E +GEDFSVEP +SRRPFRALLDVGL+RTTTGNR+FGALKG
Sbjct: 122 LARRVLKRLEMDDEYQGNVEATGEDFSVEPAESRRPFRALLDVGLIRTTTGNRIFGALKG 181

Query: 205 ALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFSD 264
           ALDGGLD+PHS KRFAGFSKDSK+LD DVHRKYI+GGHVAAYM +LMEDEPEKYQ+ FS 
Sbjct: 182 ALDGGLDIPHSDKRFAGFSKDSKQLDTDVHRKYIYGGHVAAYMGTLMEDEPEKYQTHFSR 241

Query: 265 YIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVERL 324
           YIKKGIEP++IEE+ KKVH+AIR +P  K T K+PPKEHKRYNLKKLTY+ER+AKL+ERL
Sbjct: 242 YIKKGIEPESIEEVYKKVHAAIRADPSPKKTQKEPPKEHKRYNLKKLTYEERKAKLIERL 287

Query: 325 NALN 329
           NALN
Sbjct: 302 NALN 287

[Close]

BLAST of Carg09286 vs. TrEMBL
Match: tr|F6HAX5|F6HAX5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0094g00870 PE=3 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 6.5e-134
Identity = 242/304 (79.61%), Postives = 269/304 (88.49%), Query Frame = 0


Query: 25  FAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSFRCL 84
           F KAQK+KAYFKRYQVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFV+RF       
Sbjct: 3   FVKAQKSKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRF------- 62

Query: 85  SSASGLLCYFPTNKDITAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGLL 144
                      TNKDI AQ+ S+SIAGD+VLA+AYSHELPHYGL+VGLTNYAAAYCTGLL
Sbjct: 63  -----------TNKDIIAQITSASIAGDIVLASAYSHELPHYGLEVGLTNYAAAYCTGLL 122

Query: 145 LARRVLKKLEMDDEYVGNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKG 204
           LARRVLK LEMD EY GN+E +GED+SVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKG
Sbjct: 123 LARRVLKMLEMDGEYEGNVEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKG 182

Query: 205 ALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFSD 264
           ALDGGLD+PHS KRFAGFSKDSK+LDA+VHRKYI+GGHV+AYM +L+EDEPEKYQS FS+
Sbjct: 183 ALDGGLDIPHSDKRFAGFSKDSKQLDAEVHRKYIYGGHVSAYMGTLIEDEPEKYQSHFSE 242

Query: 265 YIKKGIEPDNIEELLKKVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVERL 324
           YIKKG+EPD+IEE+ KKVH+AIR  P+ K   KQPPKEHKRYNLKKLTY+ER+AKL+ERL
Sbjct: 243 YIKKGVEPDDIEEMYKKVHAAIRANPIQKKVEKQPPKEHKRYNLKKLTYEERKAKLIERL 288

Query: 325 NALN 329
           NALN
Sbjct: 303 NALN 288

The following BLAST results are available for this feature:

BLAST of Carg09286 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961788.1	2.5e-153	93.77	60S ribosomal protein L5-like [Cucurbita moschata]	[more]
XP_022997223.1	2.1e-152	92.79	60S ribosomal protein L5-like [Cucurbita maxima]	[more]
XP_023547082.1	2.1e-152	93.46	60S ribosomal protein L5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022131844.1	4.2e-145	87.87	60S ribosomal protein L5-like [Momordica charantia]	[more]
XP_008445491.1	9.5e-145	87.54	PREDICTED: 60S ribosomal protein L5-like [Cucumis melo]	[more]

BLAST of Carg09286 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25520.1	1.2e-125	73.36	ribosomal protein L5	[more]
AT5G39740.1	1.6e-125	73.36	ribosomal protein L5 B	[more]

BLAST of Carg09286 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6UNT2\|RL5_CUCSA	2.0e-130	77.23	60S ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=RPL5 PE=2 SV=1	[more]
sp\|Q8LBI1\|RL51_ARATH	2.2e-124	73.36	60S ribosomal protein L5-1 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=1 SV=2	[more]
sp\|P49227\|RL52_ARATH	2.8e-124	73.36	60S ribosomal protein L5-2 OS=Arabidopsis thaliana OX=3702 GN=RPL5B PE=2 SV=3	[more]
sp\|A2WXX3\|RL51_ORYSI	2.2e-121	70.72	60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica OX=39946 GN=RPL5A PE=3 ...	[more]
sp\|Q0JGY1\|RL51_ORYSJ	6.5e-121	70.72	60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5A PE=...	[more]

BLAST of Carg09286 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BCD6\|A0A1S3BCD6_CUCME	6.3e-145	87.54	60S ribosomal protein L5-like OS=Cucumis melo OX=3656 GN=LOC103488491 PE=3 SV=1	[more]
tr\|A0A0A0KFL3\|A0A0A0KFL3_CUCSA	1.0e-142	86.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G365730 PE=3 SV=1	[more]
tr\|A0A2G9G1C1\|A0A2G9G1C1_9LAMI	2.2e-134	79.34	60S ribosomal protein L5 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28385 ...	[more]
tr\|A0A2R6QSP7\|A0A2R6QSP7_ACTCH	5.0e-134	79.28	60S ribosomal protein like (Fragment) OS=Actinidia chinensis var. chinensis OX=1...	[more]
tr\|F6HAX5\|F6HAX5_VITVI	6.5e-134	79.61	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0094g00870 PE=3 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0008097	5S rRNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR025607	Rbsml_L5e/L18P_C
IPR005485	Rbsml_L5_euk/L18_arc

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09286-RA	Carg09286-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PRINTS	PR00058	RIBOSOMALL5	coord: 246..266 score: 52.38 coord: 42..61 score: 74.69 coord: 65..84 score: 49.38
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PFAM	PF17144	Ribosomal_L5e	coord: 36..78 e-value: 3.1E-18 score: 66.1 coord: 96..215 e-value: 6.8E-53 score: 178.8
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PANTHER	PTHR23410	RIBOSOMAL PROTEIN L5-RELATED	coord: 24..338
IPR025607	Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal	PFAM	PF14204	Ribosomal_L18_c	coord: 231..320 e-value: 5.8E-34 score: 116.8
None	No IPR available	GENE3D	G3DSA:3.30.420.550		coord: 23..331 e-value: 4.9E-124 score: 415.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..345
None	No IPR available	PANTHER	PTHR23410:SF18	60S RIBOSOMAL PROTEIN L5-1-RELATED	coord: 24..338
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 63..210 e-value: 9.43256E-23 score: 89.9067
None	No IPR available	SUPERFAMILY	SSF53137	Translational machinery components	coord: 179..291 coord: 33..152

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09286	Cla022000	Watermelon (97103) v1	carwmB0134
Carg09286	Csa6G365730	Cucumber (Chinese Long) v2	carcuB0158
Carg09286	MELO3C011448	Melon (DHL92) v3.5.1	carmeB0142
Carg09286	ClCG08G010160	Watermelon (Charleston Gray)	carwcgB0138
Carg09286	CSPI06G19410	Wild cucumber (PI 183967)	carcpiB0163
Carg09286	Cucsa.327630	Cucumber (Gy14) v1	carcgyB0175
Carg09286	CmaCh05G004300	Cucurbita maxima (Rimu)	carcmaB0189
Carg09286	CmaCh12G000860	Cucurbita maxima (Rimu)	carcmaB0185
Carg09286	CmoCh05G004520	Cucurbita moschata (Rifu)	carcmoB0196
Carg09286	CmoCh12G000670	Cucurbita moschata (Rifu)	carcmoB0194
Carg09286	Lsi08G008750	Bottle gourd (USVL1VR-Ls)	carlsiB129
Carg09286	Cp4.1LG11g03780	Cucurbita pepo (Zucchini)	carcpeB0199
Carg09286	Cp4.1LG07g00780	Cucurbita pepo (Zucchini)	carcpeB0207
Carg09286	CsGy6G018880	Cucumber (Gy14) v2	carcgybB0156
Carg09286	MELO3C011448.2	Melon (DHL92) v3.6.1	carmedB0146
Carg09286	CsaV3_6G032340	Cucumber (Chinese Long) v3	carcucB0166
Carg09286	Cla97C08G153000	Watermelon (97103) v2	carwmbB0150
Carg09286	Bhi04G001150	Wax gourd	carwgoB0174

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg09286	Carg26696	Silver-seed gourd	carcarB007

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09286	Wax gourd	carwgoB0177