Carg08676 (gene) Silver-seed gourd

Overview
NameCarg08676
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionBRCA1-A complex subunit BRE
LocationCucurbita_argyrosperma_scaffold_057 : 459067 .. 461662 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTTCTGGAGGCAGTTTCATTGATTGATGTTAGGAGAGGCTTTATAGAGGCGTTGGACTCCTTCTTTGGAAGGCCTTTAGAAGCTGACCCGGTGAGATTCCTAAAAATTTATTTTCATCCATCTTCTTCTCCTTTTTAAAGTCCTAAAAATTTATTTCCATCTATCTTCTTCTCCTTTTTAAAGTCATTATCGAACTATTAATTTATGTGCATGTGCGCGCATGCCCCGGATCATCCCATCTCAGTAATGGCATGAACTTCTTTGTTTTTTAGGTGTTCTGTCGAACGGCTACAGTTATCACTGCCTCTGGGGTGTTCACATTCCTGGTATTAAGTGACCTTTACTATACTTGATATGTAGCATCCCATCACTATCAAGAATGTTGTTATATGGAATTTTTCCAATTATTTACTGTGAAAAAGATATTGTTCACGTAACTTTTAGTTGACTCTGGTGATTGGTTTTGATAGCTTTCTTTAACTCTCGACCAGAATAACTGCTTCTCCATCTCCTCAAAATCTTCCGTTGTTAGGATTTATTCCCTGGCCAGTAGAGATTCAGATGTAATAGTTTTAACTTTGGAGACGATCACCCCCCAAATATCTAGTACAAAATTCCAGAGTCCAGTGATGACAAAGATAGCCCTCAGTTTTTCTTTGTTAGAGAGAACCCTGAAACTAAAGATCCCTCAACATCAAAAACATTACAGTGAATTATTTTCTAAACGGTAAAAAGGAAAAGAAATAAAATTTTGTAGAGAACATCCAAAGAGAGGCATTGAAGAGAGCTACACTCACTCTAAACTTCCTCTCAAGACCTTTCTACATTCTTGAAGGTTCACCTATTTCTATCTAATCAAATATTCCGGTTAATAATGCAGAACACCGATTGTTCAAGAAGCTGACAAGCTTTGACTTATCCCAACATGTACTTGGATTACCTTTTTCTTTCTTTTGGATAAACCTGTAGTTGGCTTACTAACACTTACCACTGAGAAATCTCTCCAAATCATCACGGAAAAGTGACGTCTGCATAAAATACACCACCTTGACACAGAACCATAACATGAACCTCGGACAAATTCATAATGTCAAGTTTGATTATGTTGCCGAGGCGTTTGTCAGTTATTGTCCCTGCTGGCTGCAAAATTTTGGATAATACCCAAGACATTTTACAACTATTTATCCTTTCAAATGGTTTCTCCATCCTGTCAAGTTTCTTGAGACATTTCCAGGACATGACTTCACACAAATCTTTCTTTCAAATTGTTAATGGTTTGTTACACACATGCACACACAAACCATACTCAATCAGTGATGAATGTAATTTGATCTGTAAAAATCCTTTTGGTTTTATATTAAACCAAGATAGTGTGCATTGGTCTGGTCAGATAGGGTATAGGATGCAGCTCATGATCATTGATCAACAATATGGCTGATTCTAGATTTTAGTCAATGTGGCATGTATTATCCTTGATCTTTTGTTAATTTTTTTCCAACTTTATTTATGGTTTTATGGGTGAAAAGTTTTCTTTTCTTCATTTTCCTTCCCTTCTGTTTTTGGGAATTTCTTGTTAATGCTAGGCGCACTTCCTCATTTCAAGCCAATTTCCGAAGAAGCAGCCTTCTCTGGTGCTGCGAAGTTCTCAGGTAATGTAACTTTGTCTTAAATCTTGAAAATTCTCGTACATATCAACTTTGCTTACTAGTTAGCATGATTGTATGAGGTCCCCGATTACTATTCAATAGACAAGGAGGGGTAAAAAGGGCATTACACCATTGACAAGTTAGTTATGAATTTCCGTGTAAGGTGGGGGACAAGGGATTACGTTTAGGAAGGTGAAGTGTGTATAAAGGTTAGGGGATCGAGTACTGTGATATCACGTACTTTGTGTGCTTTGTTTATCATAAAGGGGAGAGATCACTAGACCCTCCCTGATAGGCTGGGTTACTGTTGTATTTCCCTTTGTGGCATCCTTTTCTCTGATTATCAATGCATAGTAAGGAAGATACCTTACAGATAAGTGCCATAAATATATGCTTGTACGTTTGTTTTCCATCAACATGTCTCCTGTGGTCGTGGGAACTCTTCTTGTAGTTTTGATAGAATTACTGCAGATTTCGTTCTCATTTACATTTTTCATAAATATGTTGATAATGAATCTTTGGTAAACCAATTTTTGTAAGGTTGCACGTCTTGAAGTGATCAAATGACATGATAGGTGCAATTTGTGTAACTCTAGTTTCCAAGGATTTTTCTGTTCGCTATGACTAGGAATGGCATTGTTGAGATGCCCCCTCTTTCTAATTATATCCATATATTGTTTAGCATTTCAACTCCCATGGTGCGCCCATCAAGTCGCAGCTTATTACCGACTATCCTTGGAGTCCTAGGTGGGAGCCATTGCAAATGGCTGAGCGGATTTTGTAAGTTGTATATCTGTCTCTCTTTTTTGTTTTTCGTTTGCATAATAATATACATTCACTAATCAATCATGAATTTACCAATTCAATTGGATGGTAACAGCGAGTTTCTGGCTGACGAGGCTTTGAGCTTCAAGAGGTACTGCAATGAGGCTCAACTTCAATGA

mRNA sequence

ATGAAGGTTCTGGAGGCAGTTTCATTGATTGATGTTAGGAGAGGCTTTATAGAGGCGTTGGACTCCTTCTTTGGAAGGCCTTTAGAAGCTGACCCGGTGTTCTGTCGAACGGCTACAGTTATCACTGCCTCTGGGGTGTTCACATTCCTGGCGCACTTCCTCATTTCAAGCCAATTTCCGAAGAAGCAGCCTTCTCTGGTGCTGCGAAGTTCTCAGCATTTCAACTCCCATGGTGCGCCCATCAAGTCGCAGCTTATTACCGACTATCCTTGGAGTCCTAGGTGGGAGCCATTGCAAATGGCTGAGCGGATTTTCGAGTTTCTGGCTGACGAGGCTTTGAGCTTCAAGAGGTACTGCAATGAGGCTCAACTTCAATGA

Coding sequence (CDS)

ATGAAGGTTCTGGAGGCAGTTTCATTGATTGATGTTAGGAGAGGCTTTATAGAGGCGTTGGACTCCTTCTTTGGAAGGCCTTTAGAAGCTGACCCGGTGTTCTGTCGAACGGCTACAGTTATCACTGCCTCTGGGGTGTTCACATTCCTGGCGCACTTCCTCATTTCAAGCCAATTTCCGAAGAAGCAGCCTTCTCTGGTGCTGCGAAGTTCTCAGCATTTCAACTCCCATGGTGCGCCCATCAAGTCGCAGCTTATTACCGACTATCCTTGGAGTCCTAGGTGGGAGCCATTGCAAATGGCTGAGCGGATTTTCGAGTTTCTGGCTGACGAGGCTTTGAGCTTCAAGAGGTACTGCAATGAGGCTCAACTTCAATGA

Protein sequence

MKVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPKKQPSLVLRSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNEAQLQ
Homology
[Close]
BLAST of Carg08676 vs. NCBI nr
Match: XP_022937101.1 (BRISC and BRCA1-A complex member 2-like [Cucurbita moschata])

HSP 1 Score: 250.4 bits (638), Expect = 3.3e-63
Identity = 122/124 (98.39%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 2   KVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 61
           +VLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK
Sbjct: 256 QVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 315

Query: 62  KQPSLVLRSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 121
           KQPSLVL+SSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE
Sbjct: 316 KQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 375

Query: 122 AQLQ 126
           AQLQ
Sbjct: 376 AQLQ 379

[Close]
BLAST of Carg08676 vs. NCBI nr
Match: XP_022975654.1 (BRISC and BRCA1-A complex member 2-like [Cucurbita maxima])

HSP 1 Score: 250.4 bits (638), Expect = 3.3e-63
Identity = 122/124 (98.39%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 2   KVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 61
           +VLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK
Sbjct: 256 QVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 315

Query: 62  KQPSLVLRSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 121
           KQPSLVL+SSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE
Sbjct: 316 KQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 375

Query: 122 AQLQ 126
           AQLQ
Sbjct: 376 AQLQ 379

[Close]
BLAST of Carg08676 vs. NCBI nr
Match: XP_023535339.1 (BRISC and BRCA1-A complex member 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249.2 bits (635), Expect = 7.3e-63
Identity = 121/124 (97.58%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 2   KVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 61
           +VLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK
Sbjct: 256 QVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 315

Query: 62  KQPSLVLRSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 121
           KQPSLVL+SSQHFNSHGAPIKSQLITDYPWSPRWEPLQM+ERIFEFLADEALSFKRYCNE
Sbjct: 316 KQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMSERIFEFLADEALSFKRYCNE 375

Query: 122 AQLQ 126
           AQLQ
Sbjct: 376 AQLQ 379

[Close]
BLAST of Carg08676 vs. NCBI nr
Match: XP_008466484.1 (PREDICTED: BRCA1-A complex subunit BRE [Cucumis melo])

HSP 1 Score: 241.1 bits (614), Expect = 2.0e-60
Identity = 117/124 (94.35%), Postives = 121/124 (97.58%), Query Frame = 0 

Query: 2   KVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 61
           +VLEAVSLIDVRRGFIEALD+FFGRPLEADPVFCRTATVITASGVFTFL H LIS+QFPK
Sbjct: 256 QVLEAVSLIDVRRGFIEALDNFFGRPLEADPVFCRTATVITASGVFTFLVHILISTQFPK 315

Query: 62  KQPSLVLRSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 121
           KQPSLVL+SSQHFNS GAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE
Sbjct: 316 KQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 375

Query: 122 AQLQ 126
           AQLQ
Sbjct: 376 AQLQ 379

[Close]
BLAST of Carg08676 vs. NCBI nr
Match: XP_004136379.1 (PREDICTED: BRCA1-A complex subunit BRE [Cucumis sativus] >KGN60040.1 hypothetical protein Csa_3G872710 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 3.4e-60
Identity = 117/124 (94.35%), Postives = 121/124 (97.58%), Query Frame = 0 

Query: 2   KVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 61
           +VLEAVSLIDVRRGFIEAL+SFFGRPLEADPVFCRTATVITASGVFTFL H LIS+QFPK
Sbjct: 256 QVLEAVSLIDVRRGFIEALNSFFGRPLEADPVFCRTATVITASGVFTFLVHILISTQFPK 315

Query: 62  KQPSLVLRSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 121
           KQPSLVL+SSQHFNS GAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE
Sbjct: 316 KQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 375

Query: 122 AQLQ 126
           AQLQ
Sbjct: 376 AQLQ 379

[Close]
BLAST of Carg08676 vs. TAIR10
Match: AT5G42470.1 (Brain/reproductive organ-expressed protein (InterPro:IPR010358))

HSP 1 Score: 170.6 bits (431), Expect = 6.0e-43
Identity = 77/124 (62.10%), Postives = 97/124 (78.23%), Query Frame = 0 

Query: 2   KVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 61
           ++ EAV+ ID+RR FIEAL    GRPLEADP FCR AT + ASG FTF+ HF  S+QFPK
Sbjct: 258 QIHEAVAAIDLRRSFIEALSLNLGRPLEADPTFCRKATFLNASGQFTFMVHFFFSTQFPK 317

Query: 62  KQPSLVLRSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 121
           +QP+L+L+S QH N    P+KS L+T+YPWSPRWE  +MAER+ +FL DEA++FK+YCNE
Sbjct: 318 QQPTLMLQSCQHLNQSSVPVKSNLLTEYPWSPRWEVGRMAERLCDFLTDEAVNFKKYCNE 377

Query: 122 AQLQ 126
           A LQ
Sbjct: 378 ALLQ 381

[Close]
BLAST of Carg08676 vs. Swiss-Prot
Match: sp|Q568D5|BABA2_DANRE (BRISC and BRCA1-A complex member 2 OS=Danio rerio OX=7955 GN=babam2 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.6e-08
Identity = 36/92 (39.13%), Postives = 50/92 (54.35%), Query Frame = 0 

Query: 13  RRGFIEALDSFFGR-PLEADPVFCRTATVITASGVFTFLAHFLISSQFPKKQPSLVLRSS 72
           RR +I A  S FG   +E D V     T++     F FL H  +   FP+ QP+L  +S 
Sbjct: 274 RREYIAAFLSHFGMGVVEYDAVGFTKLTLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSI 333

Query: 73  QHFNSHGAPIKSQLITDYPWSPRWEPLQMAER 104
            HF S G  + SQ+   YP+SPRW+  +MA+R
Sbjct: 334 YHFTSSG-QLYSQVQKSYPYSPRWDGNEMAKR 364

[Close]
BLAST of Carg08676 vs. Swiss-Prot
Match: sp|Q6DJ78|BABA2_XENTR (BRISC and BRCA1-A complex member 2 OS=Xenopus tropicalis OX=8364 GN=babam2 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.0e-07
Identity = 34/92 (36.96%), Postives = 50/92 (54.35%), Query Frame = 0 

Query: 13  RRGFIEALDSFFGR-PLEADPVFCRTATVITASGVFTFLAHFLISSQFPKKQPSLVLRSS 72
           RR +I A  S FG   +E D       T++ +   F FL H  +   FP+ QP+L  +S 
Sbjct: 271 RREYIAAFLSHFGTGVVEYDAEGFTKLTLLLSWKDFCFLVHIDLPLYFPRDQPTLTFQSV 330

Query: 73  QHFNSHGAPIKSQLITDYPWSPRWEPLQMAER 104
            HF + G  + SQ   +YP+SPRW+  +MA+R
Sbjct: 331 YHFTNSG-QLYSQAQKNYPYSPRWDGNEMAKR 361

[Close]
BLAST of Carg08676 vs. Swiss-Prot
Match: sp|Q5ZML0|BABA2_CHICK (BRISC and BRCA1-A complex member 2 OS=Gallus gallus OX=9031 GN=BABAM2 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.1e-07
Identity = 34/92 (36.96%), Postives = 49/92 (53.26%), Query Frame = 0 

Query: 13  RRGFIEALDSFFGR-PLEADPVFCRTATVITASGVFTFLAHFLISSQFPKKQPSLVLRSS 72
           RR +I A  S FG   +E D       T++     F FL H  +   FP+ QP+L  +S 
Sbjct: 271 RREYIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLYFPRDQPTLTFQSV 330

Query: 73  QHFNSHGAPIKSQLITDYPWSPRWEPLQMAER 104
            HF + G  + SQ   +YP+SPRW+  +MA+R
Sbjct: 331 YHFTNSG-QLYSQAQKNYPYSPRWDGNEMAKR 361

[Close]
BLAST of Carg08676 vs. Swiss-Prot
Match: sp|Q6P7Q1|BABA2_RAT (BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.6e-07
Identity = 34/92 (36.96%), Postives = 49/92 (53.26%), Query Frame = 0 

Query: 13  RRGFIEALDSFFGR-PLEADPVFCRTATVITASGVFTFLAHFLISSQFPKKQPSLVLRSS 72
           RR +I A  S FG   +E D       T++     F FL H  +   FP+ QP+L  +S 
Sbjct: 271 RREYIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKEFCFLVHIDLPLFFPRDQPTLTFQSV 330

Query: 73  QHFNSHGAPIKSQLITDYPWSPRWEPLQMAER 104
            HF + G  + SQ   +YP+SPRW+  +MA+R
Sbjct: 331 YHFTNSG-QLYSQAQKNYPYSPRWDGNEMAKR 361

[Close]
BLAST of Carg08676 vs. Swiss-Prot
Match: sp|A6QQW8|BABA2_BOVIN (BRISC and BRCA1-A complex member 2 OS=Bos taurus OX=9913 GN=BABAM2 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 8.6e-07
Identity = 34/92 (36.96%), Postives = 49/92 (53.26%), Query Frame = 0 

Query: 13  RRGFIEALDSFFGR-PLEADPVFCRTATVITASGVFTFLAHFLISSQFPKKQPSLVLRSS 72
           RR +I A  S FG   +E D       T++     F FL H  +   FP+ QP+L  +S 
Sbjct: 271 RREYIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSV 330

Query: 73  QHFNSHGAPIKSQLITDYPWSPRWEPLQMAER 104
            HF + G  + SQ   +YP+SPRW+  +MA+R
Sbjct: 331 YHFTNSG-QLYSQAQKNYPYSPRWDGNEMAKR 361

[Close]
BLAST of Carg08676 vs. TrEMBL
Match: tr|A0A1S3CSN0|A0A1S3CSN0_CUCME (BRCA1-A complex subunit BRE OS=Cucumis melo OX=3656 GN=LOC103503876 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-60
Identity = 117/124 (94.35%), Postives = 121/124 (97.58%), Query Frame = 0 

Query: 2   KVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 61
           +VLEAVSLIDVRRGFIEALD+FFGRPLEADPVFCRTATVITASGVFTFL H LIS+QFPK
Sbjct: 256 QVLEAVSLIDVRRGFIEALDNFFGRPLEADPVFCRTATVITASGVFTFLVHILISTQFPK 315

Query: 62  KQPSLVLRSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 121
           KQPSLVL+SSQHFNS GAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE
Sbjct: 316 KQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 375

Query: 122 AQLQ 126
           AQLQ
Sbjct: 376 AQLQ 379

[Close]
BLAST of Carg08676 vs. TrEMBL
Match: tr|A0A0A0LDL1|A0A0A0LDL1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872710 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.2e-60
Identity = 117/124 (94.35%), Postives = 121/124 (97.58%), Query Frame = 0 

Query: 2   KVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 61
           +VLEAVSLIDVRRGFIEAL+SFFGRPLEADPVFCRTATVITASGVFTFL H LIS+QFPK
Sbjct: 256 QVLEAVSLIDVRRGFIEALNSFFGRPLEADPVFCRTATVITASGVFTFLVHILISTQFPK 315

Query: 62  KQPSLVLRSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 121
           KQPSLVL+SSQHFNS GAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE
Sbjct: 316 KQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 375

Query: 122 AQLQ 126
           AQLQ
Sbjct: 376 AQLQ 379

[Close]
BLAST of Carg08676 vs. TrEMBL
Match: tr|W9RNI6|W9RNI6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016058 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.5e-48
Identity = 94/124 (75.81%), Postives = 108/124 (87.10%), Query Frame = 0 

Query: 2   KVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 61
           +VLEA+SL+DVRR FIEAL   FGRPLEADPVFCR ATV+ A+GVFTF+ HF I  QFP+
Sbjct: 255 QVLEAISLVDVRRRFIEALAPLFGRPLEADPVFCRRATVLAATGVFTFMVHFFIPIQFPR 314

Query: 62  KQPSLVLRSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 121
           +QP+L+L+SSQHFNS GA IKS  +T+YPWSPRWE  QMAERIFEFLADEAL+FKRYCNE
Sbjct: 315 QQPALMLQSSQHFNSQGALIKSNHLTEYPWSPRWELSQMAERIFEFLADEALNFKRYCNE 374

Query: 122 AQLQ 126
           AQLQ
Sbjct: 375 AQLQ 378

[Close]
BLAST of Carg08676 vs. TrEMBL
Match: tr|A0A0L9UIV3|A0A0L9UIV3_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g007100 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.5e-48
Identity = 94/124 (75.81%), Postives = 111/124 (89.52%), Query Frame = 0 

Query: 2   KVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 61
           +VLEAVSLI+VRR FIEAL S FGRP+EADP+FCR AT + ASGVFTFL HF+I SQFPK
Sbjct: 208 QVLEAVSLIEVRRQFIEALASPFGRPIEADPIFCRKATFLCASGVFTFLVHFMIPSQFPK 267

Query: 62  KQPSLVLRSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 121
           +QP+++L+SSQHFNS  AP+KS+LI+DYPWSPRWEPLQMAERI EFLADEAL+FKR C+E
Sbjct: 268 QQPAVMLQSSQHFNSQMAPLKSRLISDYPWSPRWEPLQMAERICEFLADEALNFKRQCSE 327

Query: 122 AQLQ 126
            Q+Q
Sbjct: 328 GQVQ 331

[Close]
BLAST of Carg08676 vs. TrEMBL
Match: tr|A0A0S3SKG8|A0A0S3SKG8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G228800 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.5e-48
Identity = 94/124 (75.81%), Postives = 111/124 (89.52%), Query Frame = 0 

Query: 2   KVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPK 61
           +VLEAVSLI+VRR FIEAL S FGRP+EADP+FCR AT + ASGVFTFL HF+I SQFPK
Sbjct: 253 QVLEAVSLIEVRRQFIEALASPFGRPIEADPIFCRKATFLCASGVFTFLVHFMIPSQFPK 312

Query: 62  KQPSLVLRSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNE 121
           +QP+++L+SSQHFNS  AP+KS+LI+DYPWSPRWEPLQMAERI EFLADEAL+FKR C+E
Sbjct: 313 QQPAVMLQSSQHFNSQMAPLKSRLISDYPWSPRWEPLQMAERICEFLADEALNFKRQCSE 372

Query: 122 AQLQ 126
            Q+Q
Sbjct: 373 GQVQ 376

The following BLAST results are available for this feature:
BLAST of Carg08676 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022937101.13.3e-6398.39BRISC and BRCA1-A complex member 2-like [Cucurbita moschata][more]
XP_022975654.13.3e-6398.39BRISC and BRCA1-A complex member 2-like [Cucurbita maxima][more]
XP_023535339.17.3e-6397.58BRISC and BRCA1-A complex member 2-like [Cucurbita pepo subsp. pepo][more]
XP_008466484.12.0e-6094.35PREDICTED: BRCA1-A complex subunit BRE [Cucumis melo][more]
XP_004136379.13.4e-6094.35PREDICTED: BRCA1-A complex subunit BRE [Cucumis sativus] >KGN60040.1 hypothetica... [more]
BLAST of Carg08676 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G42470.16.0e-4362.10Brain/reproductive organ-expressed protein (InterPro:IPR010358)[more]
BLAST of Carg08676 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q568D5|BABA2_DANRE4.6e-0839.13BRISC and BRCA1-A complex member 2 OS=Danio rerio OX=7955 GN=babam2 PE=2 SV=1[more]
sp|Q6DJ78|BABA2_XENTR3.0e-0736.96BRISC and BRCA1-A complex member 2 OS=Xenopus tropicalis OX=8364 GN=babam2 PE=2 ... [more]
sp|Q5ZML0|BABA2_CHICK5.1e-0736.96BRISC and BRCA1-A complex member 2 OS=Gallus gallus OX=9031 GN=BABAM2 PE=2 SV=1[more]
sp|Q6P7Q1|BABA2_RAT6.6e-0736.96BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 ... [more]
sp|A6QQW8|BABA2_BOVIN8.6e-0736.96BRISC and BRCA1-A complex member 2 OS=Bos taurus OX=9913 GN=BABAM2 PE=2 SV=1[more]
BLAST of Carg08676 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CSN0|A0A1S3CSN0_CUCME1.3e-6094.35BRCA1-A complex subunit BRE OS=Cucumis melo OX=3656 GN=LOC103503876 PE=4 SV=1[more]
tr|A0A0A0LDL1|A0A0A0LDL1_CUCSA2.2e-6094.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872710 PE=4 SV=1[more]
tr|W9RNI6|W9RNI6_9ROSA7.5e-4875.81Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016058 PE=4 SV=1[more]
tr|A0A0L9UIV3|A0A0L9UIV3_PHAAN7.5e-4875.81Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g007100 PE... [more]
tr|A0A0S3SKG8|A0A0S3SKG8_PHAAN7.5e-4875.81Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0070552BRISC complex
GO:0070531BRCA1-A complex
Vocabulary: INTERPRO
TermDefinition
IPR010358BRE
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0070531 BRCA1-A complex
cellular_component GO:0070552 BRISC complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08676-RACarg08676-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010358BRCA1-A complex subunit BREPFAMPF06113BREcoord: 2..74
e-value: 3.7E-5
score: 22.6
IPR010358BRCA1-A complex subunit BREPANTHERPTHR15189FAMILY NOT NAMEDcoord: 2..124

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg08676ClCG05G018230Watermelon (Charleston Gray)carwcgB0104
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg08676Carg17202Silver-seed gourdcarcarB125
The following block(s) are covering this gene:
GeneOrganismBlock
Carg08676Silver-seed gourdcarcarB122
Carg08676Silver-seed gourdcarcarB126
Carg08676Cucumber (Gy14) v2carcgybB0110
Carg08676Cucumber (Gy14) v2carcgybB0111
Carg08676Cucumber (Gy14) v1carcgyB0126
Carg08676Cucurbita maxima (Rimu)carcmaB0134
Carg08676Cucurbita maxima (Rimu)carcmaB0135
Carg08676Cucurbita maxima (Rimu)carcmaB0136
Carg08676Cucurbita maxima (Rimu)carcmaB0137
Carg08676Cucurbita moschata (Rifu)carcmoB0144
Carg08676Cucurbita moschata (Rifu)carcmoB0146
Carg08676Cucurbita moschata (Rifu)carcmoB0147
Carg08676Cucurbita pepo (Zucchini)carcpeB0152
Carg08676Cucurbita pepo (Zucchini)carcpeB0153
Carg08676Cucurbita pepo (Zucchini)carcpeB0154
Carg08676Wild cucumber (PI 183967)carcpiB0115
Carg08676Wild cucumber (PI 183967)carcpiB0116
Carg08676Cucumber (Chinese Long) v2carcuB0110
Carg08676Cucumber (Chinese Long) v2carcuB0111
Carg08676Cucumber (Chinese Long) v3carcucB0119
Carg08676Cucumber (Chinese Long) v3carcucB0120
Carg08676Bottle gourd (USVL1VR-Ls)carlsiB094
Carg08676Bottle gourd (USVL1VR-Ls)carlsiB096
Carg08676Melon (DHL92) v3.5.1carmeB0105
Carg08676Melon (DHL92) v3.5.1carmeB0106
Carg08676Melon (DHL92) v3.6.1carmedB0107
Carg08676Melon (DHL92) v3.6.1carmedB0108
Carg08676Watermelon (Charleston Gray)carwcgB0106
Carg08676Watermelon (97103) v1carwmB0101
Carg08676Watermelon (97103) v1carwmB0102
Carg08676Watermelon (97103) v2carwmbB0105
Carg08676Watermelon (97103) v2carwmbB0107
Carg08676Watermelon (97103) v2carwmbB0109
Carg08676Wax gourdcarwgoB0120