Carg08401 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAAAGAGGAAAAAAGAAAAAAACAGGAACGGAGAAATTTATCTGATCAGTTATCATTTCATCATTAATGGCGTCCATGATGAAGAACCCAGCCATGTTCGCGCCTCATTTTCCATTGCTGCAACTGCCTTCATTTTGCCACCGTTCGCCTCTCCCTCTCCTCCGTGGCCCTCCCTCAGCTGCCGCTGCCGCTTCAGTATCGAATTCCTCATTTCGGAAAGGAAGCGGCGACAGAGAGCTCCTCTCACTTTCGTCTTCCTCGGGATACCGGAATTCGACTCGGTATGTGAAGGTTAGGTCACAGCTGAGGCATCCAATTATTGCGCCGGATGATTATTGGGGCACATGGACTGCCTTGTTTGCTATTGGCGCATTGGGGATCTGGTACTTTCTATCGATTCTTATTTGTTTAGCTCAAAGTGGATATCGATTGTGACTTGCATTTATTGCTAAGGAAAGCCACATTATAAGAACACATGGGATGTATTTTATGGTGTTGGAATGTGTTTGTTTTGGGGGAGGATTATAACAGGGAAAACACTAGTGAGACTTGTTTCTTTTTCTGTTCTGCCCTCAATAGTGGAAATTGAAGTTGTTCATGAATGGATTAGAAGTTTAGTTTTATTCTTGAATCATAATGTTAGCTGTAAGCATACTGCTTAATTGAATATGCCAATTATTCTTCAGATTTTTGTAACAGTGCTTCTTTTTACTCTTAAGTAAATCTTTCAAATGACCACAATGGTAGGAGGAAATGGCAAAAGGAAAAGAGGAAACTATGTGAACCAAGAGATATCAAACATATAATATACTTCAATGAAGATGTGAAGAAAATACTCTTAAAATTATCAAAAGATATTTCAATTCATGCCACCTGAAGAAGAATGAAGTTTTATTGTTATAAATTTTGGGTGGATTACAATTTAGAGTCTATTGTATTTCATTAATATATTTTAAGACTTTTTATTTACCTTAGGTTACATTTACATAATGGTTAATTATGACCATAAAATATGAATGTTACAACTCTTGGAAGGCCTTTAATAGTTTCATTTTGAGGCTATATAAAACCATGTATGTTGTATTTGTAAGCAGACTTGGAAAATATAGTAAAAAGGAGCATTAGTGCTTTCTTTAGCCAATGGTTAAGTTTCTGTGCAATTTTATGTAGTTTAGGTTGCATGTAGAATCATTCAAGCTTGATATGATCAATCTTGCTTGTGGAGTGATTTGAATCTCAAACAAGTGTTCTTGCCTTGAGATATTTGATCAACAAGGATCATTCAAGATAGACATGATCGATCTTGCTTGTGGAGTGATTCGAATCTCAAACAAGAGTTCTTGCTTTGAGATATTCAATCAACAAGCTAATCCAAATCTTACTTCCCTTGTAGTGATTTCCACATCATTTGGTATCAGAGCTCTTGGGCTGATTTTCTTATTATTTGGTATCAGAGCTCTTGGGCTGATTTCCTTATCATTTGGCATCTGACCTTTCCCTTGGGTTGGTTCCATATCATTGAAGGAAATTAAAGGGACGTTTGTTAGGATTGGACATTCTCGTTGCATGTTTAACGACCCATTAACGGTTTTGTTTGTTAGCTAATCTGGGATTACTCTGTGAATTTGGGTTTAAAGGTCTGAGAAGACCACAATAGGTAGAACAGTGAGTGCTGCTTTGGTTAGCACTTTGGTTGGCCTGGCAGCCAGTAACTTTGGCATAATCCCCTATGAAGCCGTGTCTTATTCAATTGTCATGGAAATTCTGCTTCCAGTATCTGTTGCCTTGCTACTATTTCGGGCAGACATGCGCCATATAATCCGATCAACTGGAACATTACTTGGAGTCTTCATGCTCGGATCAGGTAATTAATTTTTCTTCAGATTCTTGATAGCACTGACTTAGTAATTCAACCTATTTTCTTGAGAATTGGTTTGAATTTTGAAGCATTAATGATTTAGAGGTTCATGTTTCTAAATTAGTCGTGAATCTACTGTTTCTTAACTATTTCACCCGCTGTAATCTAATGCTAACTTCTTGCTGATTAAGCTGAATAATGAATAATTCTTTTTAATGGTCAATCTTGCTCTTTTTTGTATTGTTATTATCATTAATGTTTCCTTTTATATTTCAAAGTCCATGGCAACTTTGAATGATCATTTTTCTTACAAACCGAGAAGCTTGAAATCGAAATTTTTTTAAAAGCCAAATGGAATGTAGTAATAAAAAGCAATTTTTGAAAAATTGAAGTTTAGGGTCAGATATTTCATTCATGATCTAAAGCTGAAGGAAACGAACATAAATTAATAGGTCCGTTACAATTAATTGTTTGACAGCCTGATTTTCAGAATTGAAAGTTCAGAATAAATTTGCTACATTGTATTAAAATTGCGAGTTTGTTTTTAACTACTTTATTTTCTGTGGATGGCAGTTGCGACTATTATTGGAACTGTGGTAGCATTTCTCATGGTGCCTATGAGATCACTGGGTCCTGACAACTGGAAAATAGCTTCTGCTCTCATGGGTAGTTATATTGGTGGATGTAAGTTGTCAGAAAGTTTAAACCCTGTTATTACTGTAGTTATGTCTCAAGTGAGGCATTTATGACCGAAACGAGATTAGATGAAATTATCTTAGGACAACTTCTTTTCATTGAATGATATCAAAACCTGTCAGCATCATGTGGCCAAGCAACCCCATTAGTGGCAGAGATTATTGTTGTAAATCCAACCTCTCGCCCTTTATATTGATACAGAGACGTTTGGGGACCACTACCACATTGCTATTTCTTTCCCAGTTGGACAGTTTTATATTGTTACAGAGACGTTTAGAGCCTTATTGAAACTAGAAAATATCTAATCGAAGTGAAATTCAAACTCTTGACACTTGTTGATAAAATTAAAATTGCTCTTGTAGCCTTCTGGAAATTAATTTGAATAAAATATAGCTATCCACCTAGTGCAATAATGCAACGAAAAATGGCTATAATCCCCCACCCCCAGATTACTGTTGAGATATTCTATGTTGGAATACACTATAAAGTACTTTAAGGATGTCAAAGAAACGAGTCTATTAAATATTGATATGGCACAGCCATGATTGTCTATGGAGCACATTGTTGATTCATAAACGTTCATCACCCTACCAATATGTATCCAGTAAACAGAATTTGCGGCTATAGAAATAATTTTTCTTACCATGCTATCATTAGAGAGTCCTCTTGTGTCACTTGTAGAGGCTGAATTTTACTGGTCATCCATATCTATGTCTTCTGGAACTATGAAACATATACATCCTACTCATTCAGCATCCATTTTTCTCTATTTGATATTTCTGATAATGTGCCTGGTTAATGTGTCTCTACTCTTTTTTTCTTCTTTGACCTTTCTTCCTGGTTGATCTATGTAGCTGTTAATTATGTTGCAATTTCAGAGGCTCTTGGTGTTTCTCCATCAGTTTTAGCGGCAGGAGTGGCTGCTGACAATGTCATCAGTGCTTTATATTTTGTAGCCCTCTTTGCATTGGCTTCTAGAACACCTCCTGAACCCCCAACATCAACCAACGGTACATGGTTCATTCTAGCTTTAGTATCATGCTAATAATTTTCAGAAAATATGCATTTGGGTCTAGCATAAGAATTGGTGAAACCTCGGTTTTGAGCTGGAGTCCCTTTTGTTGTTGAGTTTGGACTCTTTTAGTGTGCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTCGTGTATTCTTTCATTGTGCTCAATGGAAGCTTAGTTTCTTGCCCAGAAAAAAGATGATGACAAACCATCCTACAGATGCACCATTAACCATGTGTGTAATTGTAACCCATGCTATTTATATCCTTTCAAGATTGAAAGTTTTTGGACAAAATAGTACCGTACAATTCCTGGTTTCCTACTACCACATCTATGATTTCTCAATTAAAATTTGAAAACTTTCCCAGATGCTTCAACTGATATGCACTCTGATAACGGCACGAAGCTCCCTGTGTTGCCGACTGCTACGGCTGTTTTTGCATCATTTGCAATATGCAAATTTGTCACGTGGATTACAAATATATGTAAAATTCAGGGTGCCAATCTTCCTGGGATAACTGCAGTTGTTGTCATTTTAGCTACCGTTTTCCCAAAACAGTTCAGTTATTTAGCACCCGCAGCTGATACCATTGCCCTGATTCTTATGCAGGTATGTATTTTTAGTTAGTTGCATCACTCACGGAAGCTTGTGCACCGTTTTCTATTCCTGCTCGTTATTAACCACAGAAAATTTACAGTAGTACTGTAGAGAGCACTTTGATTTTCCCGCCCAAAAGTTGTATGCTTTTGTTCTGTCTGGCCTATGGATTTGGCTCACCTTTAGTTATCTCCATTGCTTACTGAGAGGGTGGGGGAAGGCTTCAAGGAGCTGTTGCTTTGACTAGGTGAAAAAAGTACATATTGGGTGGGACCTGGAGTAAACAAATAAAAAACAGTAACGGTCGGCCATTATTACTTTATGAAAAACATGCATGTTGGGACCAAGTTTGTTCCCTAATGGCATGTCCTGAACACGATCCTGCTATTTTAGTTTGAGCTGATGAAAGAATAAATTTGAGCACAGGAAAGTAAGGGAAATGACACTATCCTTGTTTAAAAAATCATTTTAAATGTTCTAAACAAAAACTTCTAGAACTTGTAGATCTGGGTAAAACACAGCATGACATGAGATTTTTAAGTTAACTGAGGAACACCTGAAAGTTCAATTGGCTTGTTTATTTGATCTGACATGAACAGGTGTTCTTTGCGGTTGTCGGTGCTAGTGGGAGTGTGTGGTATGTCATCAACAATGCACCAAGTATTTTCATGTTTGCTCTAGTTCAAGTTACAGTCCATCTTCTTGTAATTCTTGGTTTTGGAAAGCTATTCAGCATTGATTTAAAGCTGTTGCTTCTGGCTTCAAATGCCAACATTGGAGGCCCAACAACAGCATGTGGAATGGCAACTGCCAAGGGTTGGAGATCTTTGGTGGTTCCTTCTATTCTTGCTGGCATTTTCGGTATTGCAATTGCTACTTTCCTGGGCATCAGTTTTGGGGTGATGATCCTCAGGCGTTTGTAG AGAAAGAGGAAAAAAGAAAAAAACAGGAACGGAGAAATTTATCTGATCAGTTATCATTTCATCATTAATGGCGTCCATGATGAAGAACCCAGCCATGTTCGCGCCTCATTTTCCATTGCTGCAACTGCCTTCATTTTGCCACCGTTCGCCTCTCCCTCTCCTCCGTGGCCCTCCCTCAGCTGCCGCTGCCGCTTCAGTATCGAATTCCTCATTTCGGAAAGGAAGCGGCGACAGAGAGCTCCTCTCACTTTCGTCTTCCTCGGGATACCGGAATTCGACTCGGTATGTGAAGGTTAGGTCACAGCTGAGGCATCCAATTATTGCGCCGGATGATTATTGGGGCACATGGACTGCCTTGTTTGCTATTGGCGCATTGGGGATCTGGTCTGAGAAGACCACAATAGGTAGAACAGTGAGTGCTGCTTTGGTTAGCACTTTGGTTGGCCTGGCAGCCAGTAACTTTGGCATAATCCCCTATGAAGCCGTGTCTTATTCAATTGTCATGGAAATTCTGCTTCCAGTATCTGTTGCCTTGCTACTATTTCGGGCAGACATGCGCCATATAATCCGATCAACTGGAACATTACTTGGAGTCTTCATGCTCGGATCAGTTGCGACTATTATTGGAACTGTGGTAGCATTTCTCATGGTGCCTATGAGATCACTGGGTCCTGACAACTGGAAAATAGCTTCTGCTCTCATGGGTAGTTATATTGGTGGATCTGTTAATTATGTTGCAATTTCAGAGGCTCTTGGTGTTTCTCCATCAGTTTTAGCGGCAGGAGTGGCTGCTGACAATGTCATCAGTGCTTTATATTTTGTAGCCCTCTTTGCATTGGCTTCTAGAACACCTCCTGAACCCCCAACATCAACCAACGATGCTTCAACTGATATGCACTCTGATAACGGCACGAAGCTCCCTGTGTTGCCGACTGCTACGGCTGTTTTTGCATCATTTGCAATATGCAAATTTGTCACGTGGATTACAAATATATGTAAAATTCAGGGTGCCAATCTTCCTGGGATAACTGCAGTTGTTGTCATTTTAGCTACCGTTTTCCCAAAACAGTTCAGTTATTTAGCACCCGCAGCTGATACCATTGCCCTGATTCTTATGCAGGTGTTCTTTGCGGTTGTCGGTGCTAGTGGGAGTGTGTGGTATGTCATCAACAATGCACCAAGTATTTTCATGTTTGCTCTAGTTCAAGTTACAGTCCATCTTCTTGTAATTCTTGGTTTTGGAAAGCTATTCAGCATTGATTTAAAGCTGTTGCTTCTGGCTTCAAATGCCAACATTGGAGGCCCAACAACAGCATGTGGAATGGCAACTGCCAAGGGTTGGAGATCTTTGGTGGTTCCTTCTATTCTTGCTGGCATTTTCGGTATTGCAATTGCTACTTTCCTGGGCATCAGTTTTGGGGTGATGATCCTCAGGCGTTTGTAG ATGGCGTCCATGATGAAGAACCCAGCCATGTTCGCGCCTCATTTTCCATTGCTGCAACTGCCTTCATTTTGCCACCGTTCGCCTCTCCCTCTCCTCCGTGGCCCTCCCTCAGCTGCCGCTGCCGCTTCAGTATCGAATTCCTCATTTCGGAAAGGAAGCGGCGACAGAGAGCTCCTCTCACTTTCGTCTTCCTCGGGATACCGGAATTCGACTCGGTATGTGAAGGTTAGGTCACAGCTGAGGCATCCAATTATTGCGCCGGATGATTATTGGGGCACATGGACTGCCTTGTTTGCTATTGGCGCATTGGGGATCTGGTCTGAGAAGACCACAATAGGTAGAACAGTGAGTGCTGCTTTGGTTAGCACTTTGGTTGGCCTGGCAGCCAGTAACTTTGGCATAATCCCCTATGAAGCCGTGTCTTATTCAATTGTCATGGAAATTCTGCTTCCAGTATCTGTTGCCTTGCTACTATTTCGGGCAGACATGCGCCATATAATCCGATCAACTGGAACATTACTTGGAGTCTTCATGCTCGGATCAGTTGCGACTATTATTGGAACTGTGGTAGCATTTCTCATGGTGCCTATGAGATCACTGGGTCCTGACAACTGGAAAATAGCTTCTGCTCTCATGGGTAGTTATATTGGTGGATCTGTTAATTATGTTGCAATTTCAGAGGCTCTTGGTGTTTCTCCATCAGTTTTAGCGGCAGGAGTGGCTGCTGACAATGTCATCAGTGCTTTATATTTTGTAGCCCTCTTTGCATTGGCTTCTAGAACACCTCCTGAACCCCCAACATCAACCAACGATGCTTCAACTGATATGCACTCTGATAACGGCACGAAGCTCCCTGTGTTGCCGACTGCTACGGCTGTTTTTGCATCATTTGCAATATGCAAATTTGTCACGTGGATTACAAATATATGTAAAATTCAGGGTGCCAATCTTCCTGGGATAACTGCAGTTGTTGTCATTTTAGCTACCGTTTTCCCAAAACAGTTCAGTTATTTAGCACCCGCAGCTGATACCATTGCCCTGATTCTTATGCAGGTGTTCTTTGCGGTTGTCGGTGCTAGTGGGAGTGTGTGGTATGTCATCAACAATGCACCAAGTATTTTCATGTTTGCTCTAGTTCAAGTTACAGTCCATCTTCTTGTAATTCTTGGTTTTGGAAAGCTATTCAGCATTGATTTAAAGCTGTTGCTTCTGGCTTCAAATGCCAACATTGGAGGCCCAACAACAGCATGTGGAATGGCAACTGCCAAGGGTTGGAGATCTTTGGTGGTTCCTTCTATTCTTGCTGGCATTTTCGGTATTGCAATTGCTACTTTCCTGGGCATCAGTTTTGGGGTGATGATCCTCAGGCGTTTGTAG MASMMKNPAMFAPHFPLLQLPSFCHRSPLPLLRGPPSAAAAASVSNSSFRKGSGDRELLSLSSSSGYRNSTRYVKVRSQLRHPIIAPDDYWGTWTALFAIGALGIWSEKTTIGRTVSAALVSTLVGLAASNFGIIPYEAVSYSIVMEILLPVSVALLLFRADMRHIIRSTGTLLGVFMLGSVATIIGTVVAFLMVPMRSLGPDNWKIASALMGSYIGGSVNYVAISEALGVSPSVLAAGVAADNVISALYFVALFALASRTPPEPPTSTNDASTDMHSDNGTKLPVLPTATAVFASFAICKFVTWITNICKIQGANLPGITAVVVILATVFPKQFSYLAPAADTIALILMQVFFAVVGASGSVWYVINNAPSIFMFALVQVTVHLLVILGFGKLFSIDLKLLLLASNANIGGPTTACGMATAKGWRSLVVPSILAGIFGIAIATFLGISFGVMILRRL
BLAST of Carg08401 vs. NCBI nr
Match: XP_022958037.1 (uncharacterized protein LOC111459388 [Cucurbita moschata]) HSP 1 Score: 844.7 bits (2181), Expect = 1.4e-241 Identity = 454/458 (99.13%), Postives = 455/458 (99.34%), Query Frame = 0
BLAST of Carg08401 vs. NCBI nr
Match: XP_023534574.1 (uncharacterized protein LOC111796113 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 843.2 bits (2177), Expect = 4.2e-241 Identity = 452/458 (98.69%), Postives = 455/458 (99.34%), Query Frame = 0
BLAST of Carg08401 vs. NCBI nr
Match: XP_022995261.1 (uncharacterized protein LOC111490862 [Cucurbita maxima]) HSP 1 Score: 840.1 bits (2169), Expect = 3.6e-240 Identity = 452/458 (98.69%), Postives = 453/458 (98.91%), Query Frame = 0
BLAST of Carg08401 vs. NCBI nr
Match: XP_008437525.1 (PREDICTED: uncharacterized membrane protein YjcL-like isoform X1 [Cucumis melo]) HSP 1 Score: 733.4 bits (1892), Expect = 4.7e-208 Identity = 395/457 (86.43%), Postives = 418/457 (91.47%), Query Frame = 0
BLAST of Carg08401 vs. NCBI nr
Match: KGN49926.1 (hypothetical protein Csa_5G140510 [Cucumis sativus]) HSP 1 Score: 731.1 bits (1886), Expect = 2.3e-207 Identity = 393/452 (86.95%), Postives = 412/452 (91.15%), Query Frame = 0
BLAST of Carg08401 vs. TAIR10
Match: AT5G24000.1 (Protein of unknown function (DUF819)) HSP 1 Score: 472.2 bits (1214), Expect = 3.5e-133 Identity = 256/389 (65.81%), Postives = 307/389 (78.92%), Query Frame = 0
BLAST of Carg08401 vs. TAIR10
Match: AT5G52540.1 (Protein of unknown function (DUF819)) HSP 1 Score: 469.2 bits (1206), Expect = 3.0e-132 Identity = 270/440 (61.36%), Postives = 330/440 (75.00%), Query Frame = 0
BLAST of Carg08401 vs. Swiss-Prot
Match: sp|O31634|YJCL_BACSU (Uncharacterized membrane protein YjcL OS=Bacillus subtilis (strain 168) OX=224308 GN=yjcL PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.1e-35 Identity = 117/392 (29.85%), Postives = 196/392 (50.00%), Query Frame = 0
BLAST of Carg08401 vs. TrEMBL
Match: tr|A0A1S3AU88|A0A1S3AU88_CUCME (uncharacterized membrane protein YjcL-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482913 PE=4 SV=1) HSP 1 Score: 733.4 bits (1892), Expect = 3.1e-208 Identity = 395/457 (86.43%), Postives = 418/457 (91.47%), Query Frame = 0
BLAST of Carg08401 vs. TrEMBL
Match: tr|A0A0A0KQE5|A0A0A0KQE5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G140510 PE=4 SV=1) HSP 1 Score: 731.1 bits (1886), Expect = 1.5e-207 Identity = 393/452 (86.95%), Postives = 412/452 (91.15%), Query Frame = 0
BLAST of Carg08401 vs. TrEMBL
Match: tr|E5GBC8|E5GBC8_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 666.0 bits (1717), Expect = 6.1e-188 Identity = 370/440 (84.09%), Postives = 390/440 (88.64%), Query Frame = 0
BLAST of Carg08401 vs. TrEMBL
Match: tr|A0A1S4DS56|A0A1S4DS56_CUCME (uncharacterized membrane protein YjcL-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482913 PE=4 SV=1) HSP 1 Score: 582.4 bits (1500), Expect = 8.8e-163 Identity = 316/352 (89.77%), Postives = 333/352 (94.60%), Query Frame = 0
BLAST of Carg08401 vs. TrEMBL
Match: tr|A0A2P4H4H9|A0A2P4H4H9_QUESU (Putative membrane protein yjcl OS=Quercus suber OX=58331 GN=CFP56_49391 PE=4 SV=1) HSP 1 Score: 564.7 bits (1454), Expect = 1.9e-157 Identity = 302/391 (77.24%), Postives = 341/391 (87.21%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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