Carg08197 (gene) Silver-seed gourd

Overview
NameCarg08197
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Description40S ribosomal protein S6
LocationCucurbita_argyrosperma_scaffold_015 : 78708 .. 80891 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATAGGCGCTGCTTTTAAAACCCTAAACTGTAAGGCGTTGCTCGCTCTCTCGCTGGTTCGTCTCTTTTCTGCGGCCGCCTCTACGACAATCCCAGCGCTCGAAGATGAAGGTTCGGTCCTTAGATGCATCTTCTTCCTCGCTGTTTTCTTTATTTTCTATGCAATGCTAACGTTGTCTTCCCATATATTCAGTTCAATATCGCGAATCCGACGACTGGATGCCAGAAGAAGCTCGAAATCGATGACGACCAGAAACTGTTAGCTTTCAAATCCTTCAGTTTTTCAATTTGTTGTTTTAATCTCGAATGTGCATTCTATTTGATTCATATACTAAGTCCTGCTGGAACTAGGGTTTTTGAAATATATAGTAAATATTTGGGTTCCATTTTGCTAAAGCGTTAATTCGATATATTTTCCGTGTAAATTTTTATGTTATTGTTCAGCATGCTACGGAGTACTTCCTTTTGGTTTTTAGAAATTCAGCTGTAGTTATTTTGTCGTTATTTGTTTTTAGCATTCCCAGTATGTCTTCCCCCGTTTGTTTAGGCAAAGCAACAGTTCCCCGAGCAACAAAATTTTATAAATTATAAATGTCCGAAAAGAAAAATTTTAGCCATTCCTTTTTCGCTTGTACATATATTTTTCGTCATATTTATCATACTTTTGTGTTTATAATGGACTAAAATTATCCTGTCTTTGTTTAGCCGTGCCTTTTTTGACAAGAGGATCTCTCAGGAGGTCAGTGGAGATTCCCTAGGGGAGGTATGTGTTCTCTTCTGTCATCCAATTAATGCAGTCTTATAGCTGCTGTGGCTAAGTGTTCTGATTGATTATTTCCCCCTTTTCAGGAATTCAAGGGCTACGTTTTCAAGATTATGGGAGGCTGTGACAAGCAGGGATTCCCAATGAAACAGGGAGTCTTGACCCCTGGCCGTGTTCGTCTCTTGCTACACAGAGGTTTGTTGAAATTTTTATGCTATTGATTGGTCAACCAATTTAATCAAAATTTGTGGTCTACATTTATTTATTTTCAGTAATTTATAGCACACTATCCTAATTAATGTATGTATTACTTTTGTGGCCAGGTACCCCTTGTTTCCGTGGTTATGGAAGGCGTAATGGAGAACGTAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCAGGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCTAGAATGAGGGGTCCAAAAAGAGCATCCAAGATCCGCAAGCTTTTCAATCTGTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAAGCTGGTATGATTTACTATTGTTTGTTTTTTGTGTGGGTTTTCTAAATCTGTCTTAGAAGATTAAGTTGTTGTTTGTGGGGTTGTTTTTGGTTGGAGGTCGGTTGGAGAGATTTAGAGGGTTTGTGATTTTCCAACTGTGCTTGTGATTTTTTAAAATAAAGGGTCTGAGGTTAAATACTTTTTTTTTTAATTTTTTTTTTATAAAGTTGTCAAGGTATTACAATGGTTAGTATAGTTCTTTGCACGCCTTGATGGATTATGCTTAATTAATCTGGATTTGGCCCTGTCTTGTTTTGGCTCTGAACAGACTATTGTTCATACAAATTGTTTTTTCAGTTCCATTCATTCTGGATTCAAGTTTATGATGGTTTTTATTTGATTGGTGTCAGGCAAAAAGGTTAGCAAGGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCTTGCAGAGGAAGCGTGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCCAAGGCCAAGTCTGAGGCTGCTGAGTACCAAAAGCTCCTTGCCTCCAGGTTGAAGGAACAAAGAGAACGTCGCAGTGAGAGTTTGGCAAAGAAGAGGTCCAGGCTCTCCGCTGCTTCAAAGCCGTCCATTGCTGCTTAGTTCGTTCGCGCATTATTTATGTGGTCAGGGTTCTGTTATCTTTTATATTTGCCATCATCTTGTTTTGCTTTTAAAAGGATCCACTTTTTTGAGGCTGCTTGCATGACATCTCGAATGTTTTGATATTTTTGTTTCCTAATTGACAGTTATTTCTAGACATACTTCATATTTTTATGATATGATAGATGAGAGGAGTTTTG

mRNA sequence

CTCATAGGCGCTGCTTTTAAAACCCTAAACTGTAAGGCGTTGCTCGCTCTCTCGCTGGTTCGTCTCTTTTCTGCGGCCGCCTCTACGACAATCCCAGCGCTCGAAGATGAAGTTCAATATCGCGAATCCGACGACTGGATGCCAGAAGAAGCTCGAAATCGATGACGACCAGAAACTCCGTGCCTTTTTTGACAAGAGGATCTCTCAGGAGGTCAGTGGAGATTCCCTAGGGGAGGAATTCAAGGGCTACGTTTTCAAGATTATGGGAGGCTGTGACAAGCAGGGATTCCCAATGAAACAGGGAGTCTTGACCCCTGGCCGTGTTCGTCTCTTGCTACACAGAGGTACCCCTTGTTTCCGTGGTTATGGAAGGCGTAATGGAGAACGTAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCAGGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCTAGAATGAGGGGTCCAAAAAGAGCATCCAAGATCCGCAAGCTTTTCAATCTGTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAAGCTGGCAAAAAGGTTAGCAAGGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCTTGCAGAGGAAGCGTGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCCAAGGCCAAGTCTGAGGCTGCTGAGTACCAAAAGCTCCTTGCCTCCAGGTTGAAGGAACAAAGAGAACGTCGCAGTGAGAGTTTGGCAAAGAAGAGGTCCAGGCTCTCCGCTGCTTCAAAGCCGTCCATTGCTGCTTAGTTCGTTCGCGCATTATTTATGTGGTCAGGGTTCTGTTATCTTTTATATTTGCCATCATCTTGTTTTGCTTTTAAAAGGATCCACTTTTTTGAGGCTGCTTGCATGACATCTCGAATGTTTTGATATTTTTGTTTCCTAATTGACAGTTATTTCTAGACATACTTCATATTTTTATGATATGATAGATGAGAGGAGTTTTG

Coding sequence (CDS)

ATGAAGTTCAATATCGCGAATCCGACGACTGGATGCCAGAAGAAGCTCGAAATCGATGACGACCAGAAACTCCGTGCCTTTTTTGACAAGAGGATCTCTCAGGAGGTCAGTGGAGATTCCCTAGGGGAGGAATTCAAGGGCTACGTTTTCAAGATTATGGGAGGCTGTGACAAGCAGGGATTCCCAATGAAACAGGGAGTCTTGACCCCTGGCCGTGTTCGTCTCTTGCTACACAGAGGTACCCCTTGTTTCCGTGGTTATGGAAGGCGTAATGGAGAACGTAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCAGGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCTAGAATGAGGGGTCCAAAAAGAGCATCCAAGATCCGCAAGCTTTTCAATCTGTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAAGCTGGCAAAAAGGTTAGCAAGGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCTTGCAGAGGAAGCGTGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCCAAGGCCAAGTCTGAGGCTGCTGAGTACCAAAAGCTCCTTGCCTCCAGGTTGAAGGAACAAAGAGAACGTCGCAGTGAGAGTTTGGCAAAGAAGAGGTCCAGGCTCTCCGCTGCTTCAAAGCCGTCCATTGCTGCTTAG

Protein sequence

MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
Homology
[Close]
BLAST of Carg08197 vs. NCBI nr
Match: XP_022962357.1 (40S ribosomal protein S6-like [Cucurbita moschata] >XP_023547004.1 40S ribosomal protein S6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 459.1 bits (1180), Expect = 9.3e-126
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]
BLAST of Carg08197 vs. NCBI nr
Match: XP_022948606.1 (40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal protein S6 [Cucurbita maxima] >XP_023540275.1 40S ribosomal protein S6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 458.0 bits (1177), Expect = 2.1e-125
Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]
BLAST of Carg08197 vs. NCBI nr
Match: XP_022997249.1 (40S ribosomal protein S6-like [Cucurbita maxima])

HSP 1 Score: 457.6 bits (1176), Expect = 2.7e-125
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
            ASKPSIAA
Sbjct: 241 TASKPSIAA 249

[Close]
BLAST of Carg08197 vs. NCBI nr
Match: XP_004133785.1 (PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus] >KGN56379.1 hypothetical protein Csa_3G118140 [Cucumis sativus])

HSP 1 Score: 456.8 bits (1174), Expect = 4.6e-125
Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]
BLAST of Carg08197 vs. NCBI nr
Match: XP_004152628.1 (PREDICTED: 40S ribosomal protein S6 [Cucumis sativus] >KGN62705.1 hypothetical protein Csa_2G369060 [Cucumis sativus])

HSP 1 Score: 456.4 bits (1173), Expect = 6.0e-125
Identity = 237/249 (95.18%), Postives = 239/249 (95.98%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTD+EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI
Sbjct: 121 NDLPGLTDSEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKK          EYQKLL+SRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLSSRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]
BLAST of Carg08197 vs. TAIR10
Match: AT4G31700.1 (ribosomal protein S6)

HSP 1 Score: 421.8 bits (1083), Expect = 3.0e-118
Identity = 218/250 (87.20%), Postives = 229/250 (91.60%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRL- 240
           QRLVTPLTLQRKR RIA+KKK          +YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 SAASKPSIAA 250
           SAA+KPS+ A
Sbjct: 241 SAAAKPSVTA 250

[Close]
BLAST of Carg08197 vs. TAIR10
Match: AT5G10360.1 (Ribosomal protein S6e)

HSP 1 Score: 421.8 bits (1083), Expect = 3.0e-118
Identity = 217/249 (87.15%), Postives = 228/249 (91.57%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+FT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKK          +YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 249

[Close]
BLAST of Carg08197 vs. Swiss-Prot
Match: sp|O48549|RS61_ARATH (40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2)

HSP 1 Score: 421.8 bits (1083), Expect = 5.4e-117
Identity = 218/250 (87.20%), Postives = 229/250 (91.60%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRL- 240
           QRLVTPLTLQRKR RIA+KKK          +YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 SAASKPSIAA 250
           SAA+KPS+ A
Sbjct: 241 SAAAKPSVTA 250

[Close]
BLAST of Carg08197 vs. Swiss-Prot
Match: sp|P51430|RS62_ARATH (40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3)

HSP 1 Score: 421.8 bits (1083), Expect = 5.4e-117
Identity = 217/249 (87.15%), Postives = 228/249 (91.57%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+FT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKK          +YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 249

[Close]
BLAST of Carg08197 vs. Swiss-Prot
Match: sp|Q9M3V8|RS6_ASPOF (40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 1.9e-114
Identity = 224/243 (92.18%), Postives = 230/243 (94.65%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FT K GK  SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIAE   XXXXXXXXXX   KLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIAEXXXXXXXXXXXXXXXXKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AAS 244
           AA+
Sbjct: 241 AAA 243

[Close]
BLAST of Carg08197 vs. Swiss-Prot
Match: sp|P29345|RS6_TOBAC (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV=2)

HSP 1 Score: 302.4 bits (773), Expect = 4.7e-81
Identity = 168/204 (82.35%), Postives = 175/204 (85.78%), Query Frame = 0 

Query: 46  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS 105
           KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCFRGYGRRNGERRRKSVRGCIVS
Sbjct: 1   KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60

Query: 106 QDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRS 165
            DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGP+   +   L+   KEDDVRKYVNT    
Sbjct: 61  PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT-TAE 120

Query: 166 FTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQR 225
           FTTK   K SKAPKIQRLVTPLTLQRKR RIA+KKK          EYQKLLASRLKEQR
Sbjct: 121 FTTK--WKGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQR 180

Query: 226 ERRSESLAKKRSRLSAASKPSIAA 250
           E+RSESLAKKRSRLSAASKPSIAA
Sbjct: 181 EKRSESLAKKRSRLSAASKPSIAA 199

[Close]
BLAST of Carg08197 vs. Swiss-Prot
Match: sp|Q9BMX5|RS6_APLCA (40S ribosomal protein S6 OS=Aplysia californica OX=6500 GN=RPS6 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.2e-73
Identity = 149/229 (65.07%), Postives = 174/229 (75.98%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MK NI+ P TGCQK +E+DD++KLR F+DKRIS E+S D LG+E+KGYV +I GG DKQG
Sbjct: 1   MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLT  RVRLLL +   C+R   RR GER+RKSVRGCIV  +LSVL+LVI+KKG+
Sbjct: 61  FPMKQGVLTATRVRLLLDKNHSCYR--PRRTGERKRKSVRGCIVDSNLSVLSLVIIKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKV-SKAPK 180
            D+PGLTD   PR  GPKRASKIRKLFNLSKEDDVR+YV   RR    + GKK  SKAPK
Sbjct: 121 QDIPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV--VRRPLPERDGKKAKSKAPK 180

Query: 181 IQRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERR 229
           IQRLVTP+ LQRKR R+A KKK          EY KLLA R+KE +ER+
Sbjct: 181 IQRLVTPVVLQRKRARMALKKKRVTKKREDHAEYTKLLAQRMKEAKERK 225

[Close]
BLAST of Carg08197 vs. TrEMBL
Match: tr|A0A0A0L5R5|A0A0A0L5R5_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus OX=3659 GN=Csa_3G118140 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 3.0e-125
Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]
BLAST of Carg08197 vs. TrEMBL
Match: tr|A0A0A0LL90|A0A0A0LL90_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus OX=3659 GN=Csa_2G369060 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 4.0e-125
Identity = 237/249 (95.18%), Postives = 239/249 (95.98%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTD+EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI
Sbjct: 121 NDLPGLTDSEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKK          EYQKLL+SRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLSSRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]
BLAST of Carg08197 vs. TrEMBL
Match: tr|A0A1S3BC73|A0A1S3BC73_CUCME (40S ribosomal protein S6 OS=Cucumis melo OX=3656 GN=LOC103488074 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 8.9e-125
Identity = 236/249 (94.78%), Postives = 238/249 (95.58%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEK K          EYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKXKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPS+AA
Sbjct: 241 AASKPSVAA 249

[Close]
BLAST of Carg08197 vs. TrEMBL
Match: tr|A0A1U8HYU1|A0A1U8HYU1_GOSHI (40S ribosomal protein S6 OS=Gossypium hirsutum OX=3635 GN=LOC107888821 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 5.7e-124
Identity = 234/249 (93.98%), Postives = 238/249 (95.58%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKK          EYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKADAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]
BLAST of Carg08197 vs. TrEMBL
Match: tr|A0A0B0MIQ0|A0A0B0MIQ0_GOSAR (40S ribosomal protein S6 OS=Gossypium arboreum OX=29729 GN=F383_17949 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 5.7e-124
Identity = 234/249 (93.98%), Postives = 238/249 (95.58%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKK          EYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKADAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

The following BLAST results are available for this feature:
BLAST of Carg08197 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022962357.19.3e-126100.0040S ribosomal protein S6-like [Cucurbita moschata] >XP_023547004.1 40S ribosomal... [more]
XP_022948606.12.1e-12599.6040S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal prot... [more]
XP_022997249.12.7e-12599.6040S ribosomal protein S6-like [Cucurbita maxima][more]
XP_004133785.14.6e-12599.20PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus] >KGN56379.1 hypotheti... [more]
XP_004152628.16.0e-12595.18PREDICTED: 40S ribosomal protein S6 [Cucumis sativus] >KGN62705.1 hypothetical p... [more]
BLAST of Carg08197 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G31700.13.0e-11887.20ribosomal protein S6[more]
AT5G10360.13.0e-11887.15Ribosomal protein S6e[more]
BLAST of Carg08197 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O48549|RS61_ARATH5.4e-11787.2040S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2[more]
sp|P51430|RS62_ARATH5.4e-11787.1540S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3[more]
sp|Q9M3V8|RS6_ASPOF1.9e-11492.1840S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1[more]
sp|P29345|RS6_TOBAC4.7e-8182.3540S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV... [more]
sp|Q9BMX5|RS6_APLCA6.2e-7365.0740S ribosomal protein S6 OS=Aplysia californica OX=6500 GN=RPS6 PE=2 SV=1[more]
BLAST of Carg08197 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L5R5|A0A0A0L5R5_CUCSA3.0e-12599.2040S ribosomal protein S6 OS=Cucumis sativus OX=3659 GN=Csa_3G118140 PE=3 SV=1[more]
tr|A0A0A0LL90|A0A0A0LL90_CUCSA4.0e-12595.1840S ribosomal protein S6 OS=Cucumis sativus OX=3659 GN=Csa_2G369060 PE=3 SV=1[more]
tr|A0A1S3BC73|A0A1S3BC73_CUCME8.9e-12594.7840S ribosomal protein S6 OS=Cucumis melo OX=3656 GN=LOC103488074 PE=3 SV=1[more]
tr|A0A1U8HYU1|A0A1U8HYU1_GOSHI5.7e-12493.9840S ribosomal protein S6 OS=Gossypium hirsutum OX=3635 GN=LOC107888821 PE=3 SV=1[more]
tr|A0A0B0MIQ0|A0A0B0MIQ0_GOSAR5.7e-12493.9840S ribosomal protein S6 OS=Gossypium arboreum OX=29729 GN=F383_17949 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR018282Ribosomal_S6e_CS
IPR014401Ribosomal_S6_euk
IPR001377Ribosomal_S6e
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08197-RACarg08197-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 189..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..249
NoneNo IPR availablePANTHERPTHR11502:SF13SUBFAMILY NOT NAMEDcoord: 1..245
IPR001377Ribosomal protein S6eSMARTSM01405Ribosomal_S6e_2coord: 1..128
e-value: 2.0E-81
score: 286.5
IPR001377Ribosomal protein S6ePFAMPF01092Ribosomal_S6ecoord: 1..128
e-value: 5.3E-58
score: 194.3
IPR001377Ribosomal protein S6ePANTHERPTHR1150240S RIBOSOMAL PROTEIN S6coord: 1..245
IPR014401Ribosomal protein S6, eukaryoticPIRSFPIRSF002129RPS6ecoord: 1..249
e-value: 8.0E-119
score: 393.3
IPR018282Ribosomal protein S6e, conserved sitePROSITEPS00578RIBOSOMAL_S6Ecoord: 52..63

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg08197Cla014130Watermelon (97103) v1carwmB0059
Carg08197Cla022106Watermelon (97103) v1carwmB0058
Carg08197Csa2G369060Cucumber (Chinese Long) v2carcuB0059
Carg08197Csa6G499750Cucumber (Chinese Long) v2carcuB0063
Carg08197MELO3C007740Melon (DHL92) v3.5.1carmeB0063
Carg08197MELO3C011040Melon (DHL92) v3.5.1carmeB0058
Carg08197ClCG08G011230Watermelon (Charleston Gray)carwcgB0063
Carg08197ClCG01G018610Watermelon (Charleston Gray)carwcgB0061
Carg08197CSPI02G21140Wild cucumber (PI 183967)carcpiB0063
Carg08197CSPI06G30070Wild cucumber (PI 183967)carcpiB0067
Carg08197Cucsa.160150Cucumber (Gy14) v1carcgyB0066
Carg08197Cucsa.104230Cucumber (Gy14) v1carcgyB0065
Carg08197CmaCh12G001660Cucurbita maxima (Rimu)carcmaB0075
Carg08197CmaCh05G005060Cucurbita maxima (Rimu)carcmaB0083
Carg08197CmoCh12G001280Cucurbita moschata (Rifu)carcmoB0080
Carg08197CmoCh05G005330Cucurbita moschata (Rifu)carcmoB0087
Carg08197Lsi08G009780Bottle gourd (USVL1VR-Ls)carlsiB056
Carg08197Cp4.1LG11g04520Cucurbita pepo (Zucchini)carcpeB0079
Carg08197Cp4.1LG07g01460Cucurbita pepo (Zucchini)carcpeB0088
Carg08197CsGy6G029540Cucumber (Gy14) v2carcgybB0063
Carg08197CsGy2G020880Cucumber (Gy14) v2carcgybB0060
Carg08197MELO3C011040.2Melon (DHL92) v3.6.1carmedB0059
Carg08197MELO3C007740.2Melon (DHL92) v3.6.1carmedB0063
Carg08197CsaV3_2G029810Cucumber (Chinese Long) v3carcucB0065
Carg08197CsaV3_6G045270Cucumber (Chinese Long) v3carcucB0069
Carg08197Cla97C01G017980Watermelon (97103) v2carwmbB0056
Carg08197Cla97C08G154200Watermelon (97103) v2carwmbB0061
Carg08197Bhi04G000640Wax gourdcarwgoB0067
Carg08197Bhi03G000887Wax gourdcarwgoB0071
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg08197Carg20532Silver-seed gourdcarcarB068
The following block(s) are covering this gene:
GeneOrganismBlock
Carg08197Cucurbita moschata (Rifu)carcmoB0075
Carg08197Cucurbita moschata (Rifu)carcmoB0084
Carg08197Cucurbita moschata (Rifu)carcmoB0086
Carg08197Cucurbita pepo (Zucchini)carcpeB0078
Carg08197Cucurbita pepo (Zucchini)carcpeB0083
Carg08197Cucurbita pepo (Zucchini)carcpeB0085
Carg08197Wild cucumber (PI 183967)carcpiB0065
Carg08197Cucumber (Chinese Long) v2carcuB0061
Carg08197Cucumber (Chinese Long) v3carcucB0067
Carg08197Bottle gourd (USVL1VR-Ls)carlsiB053
Carg08197Bottle gourd (USVL1VR-Ls)carlsiB054
Carg08197Melon (DHL92) v3.5.1carmeB0061
Carg08197Melon (DHL92) v3.6.1carmedB0061
Carg08197Watermelon (Charleston Gray)carwcgB0059
Carg08197Watermelon (97103) v1carwmB0060
Carg08197Watermelon (97103) v2carwmbB0057
Carg08197Wax gourdcarwgoB0072
Carg08197Silver-seed gourdcarcarB064
Carg08197Silver-seed gourdcarcarB066
Carg08197Silver-seed gourdcarcarB074
Carg08197Cucumber (Gy14) v2carcgybB0062
Carg08197Cucumber (Gy14) v1carcgyB0067
Carg08197Cucurbita maxima (Rimu)carcmaB0071
Carg08197Cucurbita maxima (Rimu)carcmaB0080
Carg08197Cucurbita maxima (Rimu)carcmaB0082