Carg07857 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07857
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Leucine--tRNA ligase
Location	Cucurbita_argyrosperma_scaffold_066 : 498235 .. 498685 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCAGGTAACCGAAGAAGTTGAAGGGACACGGTTCAACACAGGAATCTCAGCTACGATGGAGTTCGTTAACATGGCATATAGGTGGACTTACATTAAAAGGTGAGGGGATTCGAACCTATAACCTCTTGGTCAATGGCATATGCGTTAATGATATGAACTATGCTTTGTTTGGCATATATCAAGAGATTAAAAAACTTGATATCTAGATCCAATTTTGACAGAAATGTTTATTTGGATATTAATGTTTAAGATTACATTATTTCTTTGCCATTTCACTTCTCTTCCTATCAGACTGATGCCATTTTTTAGCTAGGGACAGATATCCAAGGTCTATTGTTGAAGCATTCACTTTGTTGCTTTCACTGTACGCACCTCACTTGGCTGAGGAACTTTGTTCTTGGTTAGGACACTCAGAATTGTTGGCATACGAGTCCTTCCCCGAGGTGTGA

mRNA sequence

TTCCAGGTAACCGAAGAAGTTGAAGGGACACGGTTCAACACAGGAATCTCAGCTACGATGGAGTTCGTTAACATGGCATATAGGTGGACTTACATTAAAAGGGACAGATATCCAAGGTCTATTGTTGAAGCATTCACTTTGTTGCTTTCACTGTACGCACCTCACTTGGCTGAGGAACTTTGTTCTTGGTTAGGACACTCAGAATTGTTGGCATACGAGTCCTTCCCCGAGGTGTGA

Coding sequence (CDS)

TTCCAGGTAACCGAAGAAGTTGAAGGGACACGGTTCAACACAGGAATCTCAGCTACGATGGAGTTCGTTAACATGGCATATAGGTGGACTTACATTAAAAGGGACAGATATCCAAGGTCTATTGTTGAAGCATTCACTTTGTTGCTTTCACTGTACGCACCTCACTTGGCTGAGGAACTTTGTTCTTGGTTAGGACACTCAGAATTGTTGGCATACGAGTCCTTCCCCGAGGTGTGA

Protein sequence

FQVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELCSWLGHSELLAYESFPEV

Homology

[Close]

BLAST of Carg07857 vs. NCBI nr
Match: XP_022949941.1 (leucine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita moschata])

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-23
Identity = 61/76 (80.26%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VTEEVEGTRFNTGISA MEFVN+AY+W     DRYPRSIVEAFTLLLS YAPHLAEEL 
Sbjct: 862 KVTEEVEGTRFNTGISAMMEFVNVAYKW-----DRYPRSIVEAFTLLLSPYAPHLAEELW 921

Query: 62  SWLGHSELLAYESFPE 78
           S LGHSE LAYE FP+
Sbjct: 922 SRLGHSESLAYEPFPK 932

[Close]

BLAST of Carg07857 vs. NCBI nr
Match: XP_022977986.1 (leucine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita maxima])

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-23
Identity = 61/76 (80.26%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VTEEVEGTRFNTGISA MEFVN+AY+W     DRYPRSIVEAFTLLLS YAPHLAEEL 
Sbjct: 862 KVTEEVEGTRFNTGISAMMEFVNVAYKW-----DRYPRSIVEAFTLLLSPYAPHLAEELW 921

Query: 62  SWLGHSELLAYESFPE 78
           S LGHSE LAYE FP+
Sbjct: 922 SRLGHSESLAYEPFPK 932

[Close]

BLAST of Carg07857 vs. NCBI nr
Match: XP_023544274.1 (leucine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-23
Identity = 61/76 (80.26%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VTEEVEGTRFNTGISA MEFVN+AY+W     DRYPRSIVEAFTLLLS YAPHLAEEL 
Sbjct: 861 KVTEEVEGTRFNTGISAMMEFVNVAYKW-----DRYPRSIVEAFTLLLSPYAPHLAEELW 920

Query: 62  SWLGHSELLAYESFPE 78
           S LGHSE LAYE FP+
Sbjct: 921 SRLGHSESLAYEPFPK 931

[Close]

BLAST of Carg07857 vs. NCBI nr
Match: XP_004134980.1 (PREDICTED: putative leucine--tRNA ligase, mitochondrial [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 3.5e-23
Identity = 60/76 (78.95%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VTEEVEGTRFNTGISA MEFVN+AY+W     DRYPR+IVEAFTLLLS YAPHLAEEL 
Sbjct: 829 KVTEEVEGTRFNTGISAMMEFVNVAYKW-----DRYPRTIVEAFTLLLSPYAPHLAEELW 888

Query: 62  SWLGHSELLAYESFPE 78
           S LGHSE LAYE FP+
Sbjct: 889 SRLGHSESLAYEPFPK 899

[Close]

BLAST of Carg07857 vs. NCBI nr
Match: KGN49082.1 (hypothetical protein Csa_6G513460 [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 3.5e-23
Identity = 60/76 (78.95%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VTEEVEGTRFNTGISA MEFVN+AY+W     DRYPR+IVEAFTLLLS YAPHLAEEL 
Sbjct: 910 KVTEEVEGTRFNTGISAMMEFVNVAYKW-----DRYPRTIVEAFTLLLSPYAPHLAEELW 969

Query: 62  SWLGHSELLAYESFPE 78
           S LGHSE LAYE FP+
Sbjct: 970 SRLGHSESLAYEPFPK 980

[Close]

BLAST of Carg07857 vs. TAIR10
Match: AT4G04350.1 (tRNA synthetase class I (I, L, M and V) family protein)

HSP 1 Score: 97.4 bits (241), Expect = 4.0e-21
Identity = 49/76 (64.47%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VTEE+E TRFNTGIS  MEFVN AY+W     +  PR I+E F LLLS YAPH+AEEL 
Sbjct: 823 KVTEEIESTRFNTGISGMMEFVNAAYKW-----NNQPRGIIEPFVLLLSPYAPHMAEELW 882

Query: 62  SWLGHSELLAYESFPE 78
           S LGH   LAYESFP+
Sbjct: 883 SRLGHPNSLAYESFPK 893

[Close]

BLAST of Carg07857 vs. Swiss-Prot
Match: sp|Q9XEA0|SYLM_ARATH (Leucine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=EMB2369 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 7.3e-20
Identity = 49/76 (64.47%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VTEE+E TRFNTGIS  MEFVN AY+W     +  PR I+E F LLLS YAPH+AEEL 
Sbjct: 823 KVTEEIESTRFNTGISGMMEFVNAAYKW-----NNQPRGIIEPFVLLLSPYAPHMAEELW 882

Query: 62  SWLGHSELLAYESFPE 78
           S LGH   LAYESFP+
Sbjct: 883 SRLGHPNSLAYESFPK 893

[Close]

BLAST of Carg07857 vs. Swiss-Prot
Match: sp|Q65FX8|SYL_BACLD (Leucine--tRNA ligase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=leuS PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 7.8e-14
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VT+  EG RFNTGIS  M F+N AY     K D+ P+  +E F  LLS  APHLAEEL 
Sbjct: 663 KVTDHFEGLRFNTGISQLMVFINEAY-----KADQLPKEYMEGFVKLLSPVAPHLAEELW 722

Query: 62  SWLGHSELLAYESFP 77
           + LGH E +AYE++P
Sbjct: 723 NRLGHEETIAYEAWP 732

[Close]

BLAST of Carg07857 vs. Swiss-Prot
Match: sp|Q2S415|SYL_SALRD (Leucine--tRNA ligase OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=leuS PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.7e-13
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 3   VTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELCS 62
           VTE++E   FNT I+A MEFVN A +W     D  PR +   F LLLS +APHLAEEL +
Sbjct: 723 VTEDIEARDFNTAIAAMMEFVNAANKW-----DALPRQVATPFVLLLSPFAPHLAEELWA 782

Query: 63  WLGHSELLAYESFP 77
            LGH + LAY  +P
Sbjct: 783 RLGHDQSLAYADWP 791

[Close]

BLAST of Carg07857 vs. Swiss-Prot
Match: sp|P36430|SYL_BACSU (Leucine--tRNA ligase OS=Bacillus subtilis (strain 168) OX=224308 GN=leuS PE=3 SV=3)

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12
Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VT+  EG RFNTGIS  M F+N AY+ T +     P+  +E F  LLS  APHLAEEL 
Sbjct: 663 KVTDHYEGLRFNTGISQLMVFINEAYKATEL-----PKEYMEGFVKLLSPVAPHLAEELW 722

Query: 62  SWLGHSELLAYESFP 77
             LGHS  +AYE++P
Sbjct: 723 EKLGHSGTIAYEAWP 732

[Close]

BLAST of Carg07857 vs. Swiss-Prot
Match: sp|A8FGG0|SYL_BACP2 (Leucine--tRNA ligase OS=Bacillus pumilus (strain SAFR-032) OX=315750 GN=leuS PE=3 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-12
Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VT+  EG RFNTGIS  M F+N AY     K D  P+   E F  LLS  APHLAEEL 
Sbjct: 663 KVTDHYEGLRFNTGISQLMVFINDAY-----KADTLPKEYAEGFVKLLSPIAPHLAEELW 722

Query: 62  SWLGHSELLAYESFPE 78
           + LGH   ++YE++P+
Sbjct: 723 NKLGHEGSISYEAWPQ 733

[Close]

BLAST of Carg07857 vs. TrEMBL
Match: tr|A0A0A0KL57|A0A0A0KL57_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513460 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.3e-23
Identity = 60/76 (78.95%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VTEEVEGTRFNTGISA MEFVN+AY+W     DRYPR+IVEAFTLLLS YAPHLAEEL 
Sbjct: 910 KVTEEVEGTRFNTGISAMMEFVNVAYKW-----DRYPRTIVEAFTLLLSPYAPHLAEELW 969

Query: 62  SWLGHSELLAYESFPE 78
           S LGHSE LAYE FP+
Sbjct: 970 SRLGHSESLAYEPFPK 980

[Close]

BLAST of Carg07857 vs. TrEMBL
Match: tr|A0A1S3B071|A0A1S3B071_CUCME (LOW QUALITY PROTEIN: leucine--tRNA ligase, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484634 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.2e-22
Identity = 59/76 (77.63%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VTEEVEGTRFNTGISA MEFVN+AY+W     D YPR+IVEAFTLLLS YAPHLAEEL 
Sbjct: 829 KVTEEVEGTRFNTGISAMMEFVNVAYKW-----DSYPRTIVEAFTLLLSPYAPHLAEELW 888

Query: 62  SWLGHSELLAYESFPE 78
           S LGHSE LAYE FP+
Sbjct: 889 SRLGHSESLAYEPFPK 899

[Close]

BLAST of Carg07857 vs. TrEMBL
Match: tr|K4B9W8|K4B9W8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-20
Identity = 53/76 (69.74%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VTEE+EGTRFNTGISA MEF+N AY+W     D+ PRSI+EAF LLLS YAPH+AEEL 
Sbjct: 274 KVTEEIEGTRFNTGISAMMEFINAAYKW-----DKLPRSIIEAFVLLLSPYAPHMAEELW 333

Query: 62  SWLGHSELLAYESFPE 78
           S LGHS  LAYE FP+
Sbjct: 334 SRLGHSNSLAYEPFPK 344

[Close]

BLAST of Carg07857 vs. TrEMBL
Match: tr|A0A1S4DQZ2|A0A1S4DQZ2_TOBAC (leucine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2 OS=Nicotiana tabacum OX=4097 GN=LOC107832508 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-20
Identity = 53/76 (69.74%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VTEE+EGTRFNTGISA MEF+N AY+W     D+ PRSI+EAF LLLS YAPH+AEEL 
Sbjct: 803 KVTEEIEGTRFNTGISAMMEFINAAYKW-----DKLPRSIIEAFVLLLSPYAPHMAEELW 862

Query: 62  SWLGHSELLAYESFPE 78
           S LGHS  LAYE FP+
Sbjct: 863 SRLGHSNSLAYEPFPK 873

[Close]

BLAST of Carg07857 vs. TrEMBL
Match: tr|A0A1S4DR01|A0A1S4DR01_TOBAC (leucine--tRNA ligase, chloroplastic/mitochondrial-like isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107832508 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-20
Identity = 53/76 (69.74%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 2   QVTEEVEGTRFNTGISATMEFVNMAYRWTYIKRDRYPRSIVEAFTLLLSLYAPHLAEELC 61
           +VTEE+EGTRFNTGISA MEF+N AY+W     D+ PRSI+EAF LLLS YAPH+AEEL 
Sbjct: 822 KVTEEIEGTRFNTGISAMMEFINAAYKW-----DKLPRSIIEAFVLLLSPYAPHMAEELW 881

Query: 62  SWLGHSELLAYESFPE 78
           S LGHS  LAYE FP+
Sbjct: 882 SRLGHSNSLAYEPFPK 892

The following BLAST results are available for this feature:

BLAST of Carg07857 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949941.1	1.6e-23	80.26	leucine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita moschata]	[more]
XP_022977986.1	1.6e-23	80.26	leucine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita maxima]	[more]
XP_023544274.1	1.6e-23	80.26	leucine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_004134980.1	3.5e-23	78.95	PREDICTED: putative leucine--tRNA ligase, mitochondrial [Cucumis sativus]	[more]
KGN49082.1	3.5e-23	78.95	hypothetical protein Csa_6G513460 [Cucumis sativus]	[more]

BLAST of Carg07857 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G04350.1	4.0e-21	64.47	tRNA synthetase class I (I, L, M and V) family protein	[more]

BLAST of Carg07857 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9XEA0\|SYLM_ARATH	7.3e-20	64.47	Leucine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=370...	[more]
sp\|Q65FX8\|SYL_BACLD	7.8e-14	53.33	Leucine--tRNA ligase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM...	[more]
sp\|Q2S415\|SYL_SALRD	1.7e-13	52.70	Leucine--tRNA ligase OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN...	[more]
sp\|P36430\|SYL_BACSU	1.5e-12	52.00	Leucine--tRNA ligase OS=Bacillus subtilis (strain 168) OX=224308 GN=leuS PE=3 SV...	[more]
sp\|A8FGG0\|SYL_BACP2	2.5e-12	50.00	Leucine--tRNA ligase OS=Bacillus pumilus (strain SAFR-032) OX=315750 GN=leuS PE=...	[more]

BLAST of Carg07857 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KL57\|A0A0A0KL57_CUCSA	2.3e-23	78.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513460 PE=3 SV=1	[more]
tr\|A0A1S3B071\|A0A1S3B071_CUCME	1.2e-22	77.63	LOW QUALITY PROTEIN: leucine--tRNA ligase, chloroplastic/mitochondrial OS=Cucumi...	[more]
tr\|K4B9W8\|K4B9W8_SOLLC	1.9e-20	69.74	Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1	[more]
tr\|A0A1S4DQZ2\|A0A1S4DQZ2_TOBAC	1.9e-20	69.74	leucine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2 OS=Nicotiana t...	[more]
tr\|A0A1S4DR01\|A0A1S4DR01_TOBAC	1.9e-20	69.74	leucine--tRNA ligase, chloroplastic/mitochondrial-like isoform X1 OS=Nicotiana t...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0004823	leucine-tRNA ligase activity
GO:0000166	nucleotide binding
GO:0004812	aminoacyl-tRNA ligase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006429	leucyl-tRNA aminoacylation
GO:0006418	tRNA aminoacylation for protein translation

Vocabulary: **INTERPRO**
Term	Definition
IPR009080	tRNAsynth_Ia_anticodon-bd
IPR002302	Leu-tRNA-ligase
IPR013155	M/V/L/I-tRNA-synth_anticd-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0006429	leucyl-tRNA aminoacylation
biological_process	GO:0009099	valine biosynthetic process
biological_process	GO:0006418	tRNA aminoacylation for protein translation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004823	leucine-tRNA ligase activity
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07857-RA	Carg07857-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.730.10		coord: 1..78 e-value: 1.9E-17 score: 65.3
None	No IPR available	PANTHER	PTHR43740:SF3	LEUCINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL	coord: 2..77
IPR013155	Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding	PFAM	PF08264	Anticodon_1	coord: 2..77 e-value: 1.3E-6 score: 28.3
IPR002302	Leucine-tRNA ligase	PANTHER	PTHR43740	FAMILY NOT NAMED	coord: 2..77
IPR009080	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	SUPERFAMILY	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	coord: 2..78

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07857	Cla014427	Watermelon (97103) v1	carwmB0642
Carg07857	Csa6G513460	Cucumber (Chinese Long) v2	carcuB0663
Carg07857	MELO3C007414	Melon (DHL92) v3.5.1	carmeB0642
Carg07857	ClCG01G021720	Watermelon (Charleston Gray)	carwcgB0623
Carg07857	CSPI06G33310	Wild cucumber (PI 183967)	carcpiB0672
Carg07857	Cucsa.044980	Cucumber (Gy14) v1	carcgyB0714
Carg07857	CmoCh03G005780	Cucurbita moschata (Rifu)	carcmoB0886
Carg07857	CmoCh07G003170	Cucurbita moschata (Rifu)	carcmoB0888
Carg07857	Lsi01G004530	Bottle gourd (USVL1VR-Ls)	carlsiB585
Carg07857	Cp4.1LG10g09870	Cucurbita pepo (Zucchini)	carcpeB0913
Carg07857	CsGy6G032850	Cucumber (Gy14) v2	carcgybB0640
Carg07857	MELO3C007414.2	Melon (DHL92) v3.6.1	carmedB0652
Carg07857	CsaV3_6G048760	Cucumber (Chinese Long) v3	carcucB0674
Carg07857	Cla97C01G021320	Watermelon (97103) v2	carwmbB0669
Carg07857	Bhi03G000468	Wax gourd	carwgoB0759

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07857	Carg13679	Silver-seed gourd	carcarB563

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07857	Cucumber (Gy14) v2	carcgybB0641
Carg07857	Cucumber (Gy14) v1	carcgyB0717
Carg07857	Cucurbita maxima (Rimu)	carcmaB0912
Carg07857	Cucurbita maxima (Rimu)	carcmaB0914
Carg07857	Cucurbita pepo (Zucchini)	carcpeB0915
Carg07857	Wild cucumber (PI 183967)	carcpiB0673
Carg07857	Cucumber (Chinese Long) v2	carcuB0664
Carg07857	Cucumber (Chinese Long) v3	carcucB0675
Carg07857	Bottle gourd (USVL1VR-Ls)	carlsiB584
Carg07857	Melon (DHL92) v3.5.1	carmeB0640
Carg07857	Melon (DHL92) v3.6.1	carmedB0650
Carg07857	Watermelon (Charleston Gray)	carwcgB0624