Carg07609 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07609
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box/lrr-repeat protein
Location	Cucurbita_argyrosperma_scaffold_024 : 564330 .. 567123 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCTACGCTGACGTGAGAATCTCTGTATATAATTAAGTCAAATGAAACTCTAACAGTGACGGCCGCCGGAGAACCCGGAGTTTCTCCGATGAACGACGACATTCTTCACAACATCTTCCGCAGGCTTCCGGCTCGATCCTTCGCAGCGGCGGCCTGCGTTTCCAAAACATGGAACTCTACGTGCAATCGGATCCTCCGTCGCCCGAAATTCGCCTCCGCCGTGTCCTTGAATCCCTCTCTTCACGTTTGTCTCGTTACTCTTGGAGTTCCTCCGTCGATTTGGTGGTTCCGATGAAGGGATTGATGGATTTCTGTGTTGCAGGTGGCGGTGGAGGAGGTTGTTCATAAGGTTCTGTCGGAGCCGATTCGGCCGCAGTTCGCCATTGCTTGTGTCGGCGTGGAATTCAGCTTGGAAGTGGTTCACCATCTTGTATTTCTCTCCTACCCTTTTAATTTCTTCATGAAATTCGTTCATTTCAGGGTGTAATTAATCATGGGTCGGACTCAGATTACAGAGGCGCTGGGCTCAAGAACTCCGGTGATCACAAATGCAGCCAGAGGCATCATCGGCGTAGACGCGTTAACCGACGAAGTCAAGGAGGTTTGTTCATAGCATTTTGAAAGAGTTTTAGATTAATTTGAATAATTTAAGGAAAAAATTACAGGTGAAATGGGAATTGTCGGGTGATTATGATGTTGAAACTCAAGATTACAACTCGATCTTCAATCGAAACAGAGGAATCGTTTTGGCCGTCGGATTTCTGCCCGGATTTAAAGTTGATGCAATCTCACTCCTCCGTTCAATTAAGGTCAGTGGATGCGATGTTAAAGGCTAATTCAGTGTGTAAACTCTAAAAATCCAAAGTTTCAGGTGTCTGAAGTAGCTGTGGCGGATAAGTTCGTGATGGATATAAGGGACTATACAGCCTCTGTTTCCGACTTCACCTCTCCTTCCTGCATTATACTGTTTGGAGTAAGTTCCCACCATTCTCATATTTCATGGGACGGTATTGTCCTGTTTGAACTCTTCCAACCCCCTCTCAAGGTTTTAAAACGTGTTTGGCCGAGGTTTTTACGCCCTTACGAAACATTCTCCACTCTAACTAATGTGAATCTTACGATCCTCCCCTTGTGGGCCTAGTGTTCTTGACGGCAAACTACCAAGCATCTGACTTTGATACTATTTGCAACAGCCCAAGGTTTTTAAACGTTCCCCACTCTAACTAATGTGAATAGATAGTCTTTTTGGGGTTTTCCCTTTCCCTCAAAGAGGGTTTTCCACTCAAGATTTTTCGTTTCGGGTTTTTGGGTTTTCGGGTTTTCCACACATTGGAAAGAATGTTTCGTTCCCTCCTCAACCAATGTGAGATCTCACAATCCATCGCTTTTCGAGTCCAGCATCCTAGCTACGACCCCCAACCCTAACAGACAAATATTGTCCTTTTTTTCTCAACACTTTAAGATCGTTGACTTCTTCAAATCCCTTACATGGTTGGGCTGCTCATAATGCTGCAGGATCAACACGAGGACATGAAACCCATCATCGCAAAGCTAGGTAAGTTGACCACCGATCAATTCGCCGTTTACCCATAGCTCAAAACACCCTAATCGGTATATCAACATATTCCAGATTCAGCTATGGCCGAAGAAACAGTGATTGTGGGCGACGCCTGTGGCTGCTTCTTGAGCAAAAGTAGAAGAACAACCAACGAAATTAACGGGTTTTCACTTGGTGCTGTAGCTTTAGTAATTGCAAGGGACAAGAACAACCCAGAAGCTGTCGGAGAAACCATTTTCCATTTCACATCATCCACTGGAACAATCCCTTTTGGCCCTGAATTGAAAGCCGTTTCCACCAGCGTCAGAGGCTCCAAATTCACATGGCTCTCTGCTTTCATGGAAGGAGACGACGAAATCCTTCATGGACAGAGCATTCTAAAGGATCTTCAAGAAGAGGTCCGACAGCGATTTCTCTTGTTTCTGTAACTTTCATAATCTCTAACTTAGAAATTTGCAGATCGAATACGACGATTTGGAAACCGATATGTTCATCGGAGTAACGCAAAATCGAAAACAGAGCATCGGTTCACAAAGATTGGGGCCCTCAAAATCCTTGGCTATGTATAAAGTTTTAGGGTACCCTTTTCTCCTCTTTAATCCTATACCACGAAAATGATTACATAAACACATAAACACTTGAAATTTTTGGTGAATGATCGGCGGCGATTACGAACAGGGGAGACCAGCAGTATTTTGTGGTGGACGGCGTCGGAATCCGGCCAGGCGATTCCTTCTTATTCTACCATTCAGATTCAGAAACTGCGTCCTCTTCTTCCAGCATTGCATTTGAGGATCTTGCAACTCTAAACCCACCGCCCAAAACCAACGCCGCCGCAAGCTCTGTGTTTTCCGCCGGTAAAAGTGAAGTTTTTGGAGGCCTTATATTCTCCTGCCATTCTCGAGGACAGGCGTATTTTGGACGTCCCAATGTTAATTCGTCGCAGTTTAGTTTGAATTTCCCCGGTGTCCCGTTTGCCGGGATGTTTTGTGCCGGGGAAATTGGTCGTGCCGTTTCGAGGTCGATTCCGGACGAGGAAGAGGTAGACGAGGATGATTCTGTTCGCCGTTGTCTGCATGTTTATAGTACTGTTTATTTGGTTTTGTCTCATATTAATGGCGGCGGAGAAGGGTAAAAGATGAAGATGGTGATGAATATTATGTGATTTGTGTTTAATAAGTTCATCTTTGCAAAAATTGGAATAAAAAGTTTAGATGTGTTATATATAAATATA

mRNA sequence

AAACCTACGCTGACGTGAGAATCTCTGTATATAATTAAGTCAAATGAAACTCTAACAGTGACGGCCGCCGGAGAACCCGGAGTTTCTCCGATGAACGACGACATTCTTCACAACATCTTCCGCAGGCTTCCGGCTCGATCCTTCGCAGCGGCGGCCTGCGTTTCCAAAACATGGAACTCTACGTGCAATCGGATCCTCCGTCGCCCGAAATTCGCCTCCGCCGTGTCCTTGAATCCCTCTCTTCACGTGGCGGTGGAGGAGGTTGTTCATAAGGTTCTGTCGGAGCCGATTCGGCCGCAGTTCGCCATTGCTTGTGTCGGCGTGGAATTCAGCTTGGAAGTGGTTCACCATCTTATTACAGAGGCGCTGGGCTCAAGAACTCCGGTGATCACAAATGCAGCCAGAGGCATCATCGGCGTAGACGCGTTAACCGACGAAGTCAAGGAGGTGAAATGGGAATTGTCGGGTGATTATGATGTTGAAACTCAAGATTACAACTCGATCTTCAATCGAAACAGAGGAATCGTTTTGGCCGTCGGATTTCTGCCCGGATTTAAAGTTGATGCAATCTCACTCCTCCGTTCAATTAAGGTGTCTGAAGTAGCTGTGGCGGATAAGTTCGTGATGGATATAAGGGACTATACAGCCTCTGTTTCCGACTTCACCTCTCCTTCCTGCATTATACTGTTTGGAGATCAACACGAGGACATGAAACCCATCATCGCAAAGCTAGATTCAGCTATGGCCGAAGAAACAGTGATTGTGGGCGACGCCTGTGGCTGCTTCTTGAGCAAAAGTAGAAGAACAACCAACGAAATTAACGGGTTTTCACTTGGTGCTGTAGCTTTAGTAATTGCAAGGGACAAGAACAACCCAGAAGCTGTCGGAGAAACCATTTTCCATTTCACATCATCCACTGGAACAATCCCTTTTGGCCCTGAATTGAAAGCCGTTTCCACCAGCGTCAGAGGCTCCAAATTCACATGGCTCTCTGCTTTCATGGAAGGAGACGACGAAATCCTTCATGGACAGAGCATTCTAAAGGATCTTCAAGAAGAGATCGAATACGACGATTTGGAAACCGATATGTTCATCGGAGTAACGCAAAATCGAAAACAGAGCATCGGTTCACAAAGATTGGGGCCCTCAAAATCCTTGGCTATGTATAAAGTTTTAGGGGGAGACCAGCAGTATTTTGTGGTGGACGGCGTCGGAATCCGGCCAGGCGATTCCTTCTTATTCTACCATTCAGATTCAGAAACTGCGTCCTCTTCTTCCAGCATTGCATTTGAGGATCTTGCAACTCTAAACCCACCGCCCAAAACCAACGCCGCCGCAAGCTCTGTGTTTTCCGCCGGTAAAAGTGAAGTTTTTGGAGGCCTTATATTCTCCTGCCATTCTCGAGGACAGGCGTATTTTGGACGTCCCAATGTTAATTCGTCGCAGTTTAGTTTGAATTTCCCCGGTGTCCCGTTTGCCGGGATGTTTTGTGCCGGGGAAATTGGTCGTGCCGTTTCGAGGTCGATTCCGGACGAGGAAGAGGTAGACGAGGATGATTCTGTTCGCCGTTGTCTGCATGTTTATAGTACTGTTTATTTGGTTTTGTCTCATATTAATGGCGGCGGAGAAGGGTAAAAGATGAAGATGGTGATGAATATTATGTGATTTGTGTTTAATAAGTTCATCTTTGCAAAAATTGGAATAAAAAGTTTAGATGTGTTATATATAAATATA

Coding sequence (CDS)

ATGAACGACGACATTCTTCACAACATCTTCCGCAGGCTTCCGGCTCGATCCTTCGCAGCGGCGGCCTGCGTTTCCAAAACATGGAACTCTACGTGCAATCGGATCCTCCGTCGCCCGAAATTCGCCTCCGCCGTGTCCTTGAATCCCTCTCTTCACGTGGCGGTGGAGGAGGTTGTTCATAAGGTTCTGTCGGAGCCGATTCGGCCGCAGTTCGCCATTGCTTGTGTCGGCGTGGAATTCAGCTTGGAAGTGGTTCACCATCTTATTACAGAGGCGCTGGGCTCAAGAACTCCGGTGATCACAAATGCAGCCAGAGGCATCATCGGCGTAGACGCGTTAACCGACGAAGTCAAGGAGGTGAAATGGGAATTGTCGGGTGATTATGATGTTGAAACTCAAGATTACAACTCGATCTTCAATCGAAACAGAGGAATCGTTTTGGCCGTCGGATTTCTGCCCGGATTTAAAGTTGATGCAATCTCACTCCTCCGTTCAATTAAGGTGTCTGAAGTAGCTGTGGCGGATAAGTTCGTGATGGATATAAGGGACTATACAGCCTCTGTTTCCGACTTCACCTCTCCTTCCTGCATTATACTGTTTGGAGATCAACACGAGGACATGAAACCCATCATCGCAAAGCTAGATTCAGCTATGGCCGAAGAAACAGTGATTGTGGGCGACGCCTGTGGCTGCTTCTTGAGCAAAAGTAGAAGAACAACCAACGAAATTAACGGGTTTTCACTTGGTGCTGTAGCTTTAGTAATTGCAAGGGACAAGAACAACCCAGAAGCTGTCGGAGAAACCATTTTCCATTTCACATCATCCACTGGAACAATCCCTTTTGGCCCTGAATTGAAAGCCGTTTCCACCAGCGTCAGAGGCTCCAAATTCACATGGCTCTCTGCTTTCATGGAAGGAGACGACGAAATCCTTCATGGACAGAGCATTCTAAAGGATCTTCAAGAAGAGATCGAATACGACGATTTGGAAACCGATATGTTCATCGGAGTAACGCAAAATCGAAAACAGAGCATCGGTTCACAAAGATTGGGGCCCTCAAAATCCTTGGCTATGTATAAAGTTTTAGGGGGAGACCAGCAGTATTTTGTGGTGGACGGCGTCGGAATCCGGCCAGGCGATTCCTTCTTATTCTACCATTCAGATTCAGAAACTGCGTCCTCTTCTTCCAGCATTGCATTTGAGGATCTTGCAACTCTAAACCCACCGCCCAAAACCAACGCCGCCGCAAGCTCTGTGTTTTCCGCCGGTAAAAGTGAAGTTTTTGGAGGCCTTATATTCTCCTGCCATTCTCGAGGACAGGCGTATTTTGGACGTCCCAATGTTAATTCGTCGCAGTTTAGTTTGAATTTCCCCGGTGTCCCGTTTGCCGGGATGTTTTGTGCCGGGGAAATTGGTCGTGCCGTTTCGAGGTCGATTCCGGACGAGGAAGAGGTAGACGAGGATGATTCTGTTCGCCGTTGTCTGCATGTTTATAGTACTGTTTATTTGGTTTTGTCTCATATTAATGGCGGCGGAGAAGGGTAA

Protein sequence

MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVHKVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEVKWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVMDIRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRRTTNEINGFSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSKFTWLSAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQRLGPSKSLAMYKVLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPKTNAAASSVFSAGKSEVFGGLIFSCHSRGQAYFGRPNVNSSQFSLNFPGVPFAGMFCAGEIGRAVSRSIPDEEEVDEDDSVRRCLHVYSTVYLVLSHINGGGEG

Homology

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BLAST of Carg07609 vs. NCBI nr
Match: XP_022924041.1 (F-box/LRR-repeat protein At5g63520-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1011.5 bits (2614), Expect = 1.0e-291
Identity = 510/514 (99.22%), Postives = 511/514 (99.42%), Query Frame = 0


Query: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60
           MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH
Sbjct: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60

Query: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120
           KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV
Sbjct: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120

Query: 121 KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVMD 180
           KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVMD
Sbjct: 121 KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVMD 180

Query: 181 IRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRRTT 240
           IRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRRTT
Sbjct: 181 IRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRRTT 240

Query: 241 NEINGFSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSKFTWL 300
           NEINGFSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSKFTWL
Sbjct: 241 NEINGFSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSKFTWL 300

Query: 301 SAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQRLGPSKSLAMYK 360
           SAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQ LGPSKSLAMYK
Sbjct: 301 SAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQSLGPSKSLAMYK 360

Query: 361 VLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPKTNAAASSVF 420
           VLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPKTNAA SSVF
Sbjct: 361 VLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPKTNAAPSSVF 420

Query: 421 SAGKSEVFGGLIFSCHSRGQAYFGRPNVNSSQFSLNFPGVPFAGMFCAGEIGRAVSRSIP 480
           +AGKSEVFGGLIFSCHSRGQAYFGRPNVNSS FSLNFPGVPFAGMFCAGEIGRAVSRSIP
Sbjct: 421 AAGKSEVFGGLIFSCHSRGQAYFGRPNVNSSPFSLNFPGVPFAGMFCAGEIGRAVSRSIP 480

Query: 481 DEEEVDEDDSVRRCLHVYSTVYLVLSHINGGGEG 515
           DEEEVDEDDSVRRCLHVYSTVYLVLSHINGGGEG
Sbjct: 481 DEEEVDEDDSVRRCLHVYSTVYLVLSHINGGGEG 514

[Close]

BLAST of Carg07609 vs. NCBI nr
Match: XP_022924040.1 (F-box/LRR-repeat protein At5g63520-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1006.5 bits (2601), Expect = 3.2e-290
Identity = 510/516 (98.84%), Postives = 511/516 (99.03%), Query Frame = 0


Query: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60
           MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH
Sbjct: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60

Query: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120
           KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV
Sbjct: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120

Query: 121 KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIK--VSEVAVADKFV 180
           KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIK  VSEVAVADKFV
Sbjct: 121 KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKFQVSEVAVADKFV 180

Query: 181 MDIRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRR 240
           MDIRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRR
Sbjct: 181 MDIRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRR 240

Query: 241 TTNEINGFSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSKFT 300
           TTNEINGFSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSKFT
Sbjct: 241 TTNEINGFSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSKFT 300

Query: 301 WLSAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQRLGPSKSLAM 360
           WLSAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQ LGPSKSLAM
Sbjct: 301 WLSAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQSLGPSKSLAM 360

Query: 361 YKVLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPKTNAAASS 420
           YKVLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPKTNAA SS
Sbjct: 361 YKVLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPKTNAAPSS 420

Query: 421 VFSAGKSEVFGGLIFSCHSRGQAYFGRPNVNSSQFSLNFPGVPFAGMFCAGEIGRAVSRS 480
           VF+AGKSEVFGGLIFSCHSRGQAYFGRPNVNSS FSLNFPGVPFAGMFCAGEIGRAVSRS
Sbjct: 421 VFAAGKSEVFGGLIFSCHSRGQAYFGRPNVNSSPFSLNFPGVPFAGMFCAGEIGRAVSRS 480

Query: 481 IPDEEEVDEDDSVRRCLHVYSTVYLVLSHINGGGEG 515
           IPDEEEVDEDDSVRRCLHVYSTVYLVLSHINGGGEG
Sbjct: 481 IPDEEEVDEDDSVRRCLHVYSTVYLVLSHINGGGEG 516

[Close]

BLAST of Carg07609 vs. NCBI nr
Match: XP_023519918.1 (F-box/LRR-repeat protein At5g63520-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1004.6 bits (2596), Expect = 1.2e-289
Identity = 506/513 (98.64%), Postives = 510/513 (99.42%), Query Frame = 0


Query: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60
           MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH
Sbjct: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60

Query: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120
           KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV
Sbjct: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120

Query: 121 KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVMD 180
           KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVMD
Sbjct: 121 KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVMD 180

Query: 181 IRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRRTT 240
           IRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRRTT
Sbjct: 181 IRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRRTT 240

Query: 241 NEINGFSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSKFTWL 300
           NEINGFSLGAVALVIARDKN+PEAVGETIFHFTSSTGTIPFGPELKAVSTS+RGSKFTWL
Sbjct: 241 NEINGFSLGAVALVIARDKNSPEAVGETIFHFTSSTGTIPFGPELKAVSTSIRGSKFTWL 300

Query: 301 SAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQRLGPSKSLAMYK 360
           SAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQ LGPSKSLAMYK
Sbjct: 301 SAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQSLGPSKSLAMYK 360

Query: 361 VLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPKTNAAASSVF 420
           VLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPKTNAAASSVF
Sbjct: 361 VLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPKTNAAASSVF 420

Query: 421 SAGKSEVFGGLIFSCHSRGQAYFGRPNVNSSQFSLNFPGVPFAGMFCAGEIGRAVSRSIP 480
           +AGKSEVFGGLIFSCHSRGQAYFGRPNVNSS FSLNFPGVPFAGMFCAGEIGRAVSRSI 
Sbjct: 421 AAGKSEVFGGLIFSCHSRGQAYFGRPNVNSSPFSLNFPGVPFAGMFCAGEIGRAVSRSIR 480

Query: 481 DEEEVDEDDSVRRCLHVYSTVYLVLSHINGGGE 514
           DEEEVDEDDSVRRCLHVYSTVYLV+SHINGGGE
Sbjct: 481 DEEEVDEDDSVRRCLHVYSTVYLVMSHINGGGE 513

[Close]

BLAST of Carg07609 vs. NCBI nr
Match: XP_023001167.1 (LOW QUALITY PROTEIN: F-box/LRR-repeat protein At5g63520-like [Cucurbita maxima])

HSP 1 Score: 958.0 bits (2475), Expect = 1.3e-275
Identity = 483/514 (93.97%), Postives = 497/514 (96.69%), Query Frame = 0


Query: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60
           MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH
Sbjct: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60

Query: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120
           KVLSEPIRPQFAIAC+GVEFSLEVVHHLITEALGS T VITNAARGIIGVDALTDE+KEV
Sbjct: 61  KVLSEPIRPQFAIACIGVEFSLEVVHHLITEALGSXTLVITNAARGIIGVDALTDEIKEV 120

Query: 121 KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVMD 180
           KWEL+GDYD+ETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSI+V+E A+ADKFV D
Sbjct: 121 KWELAGDYDIETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIRVTEEAMADKFVTD 180

Query: 181 IRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRRTT 240
           IRD+TASVSDFTSP CIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRRT+
Sbjct: 181 IRDHTASVSDFTSPYCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRRTS 240

Query: 241 NEINGFSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSKFTWL 300
           NEI+GFSLGAVALVIARDKNNPE VGETIFHFTSSTGTIPFG ELKAVSTSVRGSKFTWL
Sbjct: 241 NEIHGFSLGAVALVIARDKNNPECVGETIFHFTSSTGTIPFGLELKAVSTSVRGSKFTWL 300

Query: 301 SAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQRLGPSKSLAMYK 360
           SAFMEGD+EILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQ LGPSKSL MYK
Sbjct: 301 SAFMEGDNEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQSLGPSKSLDMYK 360

Query: 361 VLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPKTNAAASSVF 420
           VLGGDQQYFVVDGVGIRPGDS LFYHSDSETASSSS+IAFEDL TLNPPPKTNA ASSVF
Sbjct: 361 VLGGDQQYFVVDGVGIRPGDSILFYHSDSETASSSSNIAFEDLTTLNPPPKTNAPASSVF 420

Query: 421 SAGKSEVFGGLIFSCHSRGQAYFGRPNVNSSQFSLNFPGVPFAGMFCAGEIGRAVSRSIP 480
           +AGKS VFG LIFSCHSRGQAYFGRPNVNSS FSLNFPGVPF+GMFCAGEIGRAVSRSI 
Sbjct: 421 AAGKSAVFGCLIFSCHSRGQAYFGRPNVNSSPFSLNFPGVPFSGMFCAGEIGRAVSRSIR 480

Query: 481 DEEEVDEDDSVRRCLHVYSTVYLVLSHINGGGEG 515
           DEEEVDEDDSVRR LHVYSTVYLVLSHINGGGEG
Sbjct: 481 DEEEVDEDDSVRRFLHVYSTVYLVLSHINGGGEG 514

[Close]

BLAST of Carg07609 vs. NCBI nr
Match: XP_022137117.1 (F-box/LRR-repeat protein At5g63520 [Momordica charantia])

HSP 1 Score: 776.9 bits (2005), Expect = 4.1e-221
Identity = 393/520 (75.58%), Postives = 441/520 (84.81%), Query Frame = 0


Query: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60
           +N DILHNI  RLPAR FA+AACV KTWN  CNRIL RPKFASAVSLNPS  VAV+EV+ 
Sbjct: 18  VNGDILHNILGRLPARCFASAACVCKTWNCICNRILSRPKFASAVSLNPSFDVAVKEVLR 77

Query: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120
           KVLSEPIRP FAIAC+GVEF LE  H+LITEALGSRTPVITN ARGIIG+DALT+E+KEV
Sbjct: 78  KVLSEPIRPHFAIACIGVEFDLEASHNLITEALGSRTPVITNEARGIIGIDALTNEIKEV 137

Query: 121 KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVMD 180
           KWE   + D + Q YNSI NRNRGIVLA+GFLPGFK DAISLLR  K S+  + DKF+MD
Sbjct: 138 KWESVSEDDSDAQQYNSISNRNRGIVLALGFLPGFKADAISLLRPNKASQEVMVDKFIMD 197

Query: 181 IRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRRTT 240
           IRDYTASVS   SPSCII+FGDQH DMKPIIAKLDSAMAEETVIVGDACGCFL++SRR  
Sbjct: 198 IRDYTASVSASASPSCIIMFGDQHVDMKPIIAKLDSAMAEETVIVGDACGCFLTRSRRKN 257

Query: 241 NEING---FSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSKF 300
           NEI+G     + AVALV+ARDKN P+ VGETIFHFTSSTGTIPFGP+L+AVST+VRGS+F
Sbjct: 258 NEIDGNDSLEVDAVALVLARDKNEPQGVGETIFHFTSSTGTIPFGPQLEAVSTNVRGSRF 317

Query: 301 TWLSAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQRLGPSKSLA 360
           TWLSA +EGDDEILHG SILK L+EEIEYDDLETD+FIGV Q R+QSIGSQ LGPS SLA
Sbjct: 318 TWLSALIEGDDEILHGHSILKALKEEIEYDDLETDLFIGVVQYREQSIGSQNLGPSPSLA 377

Query: 361 MYKVLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPP-------P 420
           MYKVLGGD++YFVV+GVGIRPGDSFLFYHSD+ETA SSS    EDL+TL P        P
Sbjct: 378 MYKVLGGDEEYFVVEGVGIRPGDSFLFYHSDTETALSSSYNVLEDLSTLRPDPVGFQSLP 437

Query: 421 KTNAAASSVFSAGKSEVFGGLIFSCHSRGQAYFGRPNVNSSQFSLNFPGVPFAGMFCAGE 480
           KT AAA+SV    K+EVFGGLIFSCH RG++YFGRPNVN+S FS+NFPGVP AG+FCAGE
Sbjct: 438 KTRAAANSVSFGEKNEVFGGLIFSCHCRGRSYFGRPNVNTSPFSVNFPGVPLAGIFCAGE 497

Query: 481 IGRAVSRSIPDEEEVDEDDSVRRCLHVYSTVYLVLSHING 511
           IGRA  RSI + EE +EDDSVRRCLHVYST+YLV+SH++G
Sbjct: 498 IGRAFPRSIREVEE-EEDDSVRRCLHVYSTIYLVMSHVDG 536

[Close]

BLAST of Carg07609 vs. TAIR10
Match: AT5G63520.1 (F-box domain, Skp2-like (InterPro:IPR022364), FIST C domain (InterPro:IPR019494), FIST domain, N-terminal (InterPro:IPR013702))

HSP 1 Score: 326.6 bits (836), Expect = 2.7e-89
Identity = 208/519 (40.08%), Postives = 286/519 (55.11%), Query Frame = 0


Query: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60
           MN+D+LHNI  RLPA+SFA A+CV++ W+S CNRIL RPK  SA S NP    A EEV+ 
Sbjct: 26  MNEDLLHNILLRLPAKSFAFASCVNRFWSSVCNRILSRPKMISAFSRNPDQLRAGEEVLD 85

Query: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120
           KVLSEPIRPQF IA +    ++E    LITE +GSR P+I +   GI+G +A  D+  EV
Sbjct: 86  KVLSEPIRPQFVIANITCG-NMEETLTLITERVGSRVPIIVSVVTGILGKEACNDKAGEV 145

Query: 121 KWELSGDYDVETQDYNSIFN-RNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVM 180
           +   + D        + +F+  N  I+L +G+LPG KVD I ++++   S   + DKFVM
Sbjct: 146 RLHSTSD--------DELFDVANFAILLTIGYLPGMKVDIIPVIQAKGESGAEMEDKFVM 205

Query: 181 DIRDYTASVSDF-TSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRR 240
           DIR+Y + VS    +P+C+ILF +     +P++ KLD AM  ETVIVG   G FL K   
Sbjct: 206 DIRNYMSMVSGHAAAPACLILFAEDTHATEPVLHKLDYAMPAETVIVGGQIGEFLHK--- 265

Query: 241 TTNEINGFSLG------AVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSV 300
             NE     L          L+ ARD++ P       F    S G        KA + +V
Sbjct: 266 RGNEPRNVQLQKDDIRVLAGLIFARDRHRPAQAERIQFDTAISNGMSSVDLRYKAANVNV 325

Query: 301 R---GSKFTWLSAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIG-SQ 360
                   T L+A   G+ E+L G  IL D+   +E    E D ++GV + RK SIG  +
Sbjct: 326 SLGPSCPSTLLTAKRRGEAEVLDGDQILDDIDNILENYIWENDSYLGVIKRRKYSIGLEE 385

Query: 361 RLGPSKSLAMYKVLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNP 420
           +     SL  ++V G D Q  +VDG GI+ GD F  Y  D + A ++ +     L  L  
Sbjct: 386 KPKIMSSLVFHQVNGSDDQDLLVDGAGIKTGDQFQVYLPDLKVAEAALNDVSAQLRNLKS 445

Query: 421 PPKTNAAASSVFSAGKSEVFGGLIFSCHSRGQAYFGRPNVNSSQFSLNFPGVPFAGMFCA 480
            P             K EV GG  F    RG ++FG PN +SS F  NFP +PF G+FC 
Sbjct: 446 KP------------NKPEVVGGFAFVGSCRGDSFFGCPNADSSPFLENFPELPFGGIFCD 505

Query: 481 GEIGRAVSRSIPDEEEVDEDDSVRRCLHVYSTVYLVLSH 508
           GEIGR++   I +E E  ++ S++R LHVYS+VYL++S+
Sbjct: 506 GEIGRSL---ILEEGEEKKEVSIQRFLHVYSSVYLIVSY 517

[Close]

BLAST of Carg07609 vs. Swiss-Prot
Match: sp|Q9FMV0|FBL91_ARATH (F-box/LRR-repeat protein At5g63520 OS=Arabidopsis thaliana OX=3702 GN=At5g63520 PE=2 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 4.8e-88
Identity = 208/519 (40.08%), Postives = 286/519 (55.11%), Query Frame = 0


Query: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60
           MN+D+LHNI  RLPA+SFA A+CV++ W+S CNRIL RPK  SA S NP    A EEV+ 
Sbjct: 36  MNEDLLHNILLRLPAKSFAFASCVNRFWSSVCNRILSRPKMISAFSRNPDQLRAGEEVLD 95

Query: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120
           KVLSEPIRPQF IA +    ++E    LITE +GSR P+I +   GI+G +A  D+  EV
Sbjct: 96  KVLSEPIRPQFVIANITCG-NMEETLTLITERVGSRVPIIVSVVTGILGKEACNDKAGEV 155

Query: 121 KWELSGDYDVETQDYNSIFN-RNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVM 180
           +   + D        + +F+  N  I+L +G+LPG KVD I ++++   S   + DKFVM
Sbjct: 156 RLHSTSD--------DELFDVANFAILLTIGYLPGMKVDIIPVIQAKGESGAEMEDKFVM 215

Query: 181 DIRDYTASVSDF-TSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRR 240
           DIR+Y + VS    +P+C+ILF +     +P++ KLD AM  ETVIVG   G FL K   
Sbjct: 216 DIRNYMSMVSGHAAAPACLILFAEDTHATEPVLHKLDYAMPAETVIVGGQIGEFLHK--- 275

Query: 241 TTNEINGFSLG------AVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSV 300
             NE     L          L+ ARD++ P       F    S G        KA + +V
Sbjct: 276 RGNEPRNVQLQKDDIRVLAGLIFARDRHRPAQAERIQFDTAISNGMSSVDLRYKAANVNV 335

Query: 301 R---GSKFTWLSAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIG-SQ 360
                   T L+A   G+ E+L G  IL D+   +E    E D ++GV + RK SIG  +
Sbjct: 336 SLGPSCPSTLLTAKRRGEAEVLDGDQILDDIDNILENYIWENDSYLGVIKRRKYSIGLEE 395

Query: 361 RLGPSKSLAMYKVLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNP 420
           +     SL  ++V G D Q  +VDG GI+ GD F  Y  D + A ++ +     L  L  
Sbjct: 396 KPKIMSSLVFHQVNGSDDQDLLVDGAGIKTGDQFQVYLPDLKVAEAALNDVSAQLRNLKS 455

Query: 421 PPKTNAAASSVFSAGKSEVFGGLIFSCHSRGQAYFGRPNVNSSQFSLNFPGVPFAGMFCA 480
            P             K EV GG  F    RG ++FG PN +SS F  NFP +PF G+FC 
Sbjct: 456 KP------------NKPEVVGGFAFVGSCRGDSFFGCPNADSSPFLENFPELPFGGIFCD 515

Query: 481 GEIGRAVSRSIPDEEEVDEDDSVRRCLHVYSTVYLVLSH 508
           GEIGR++   I +E E  ++ S++R LHVYS+VYL++S+
Sbjct: 516 GEIGRSL---ILEEGEEKKEVSIQRFLHVYSSVYLIVSY 527

[Close]

BLAST of Carg07609 vs. TrEMBL
Match: tr|A0A2P4HQB8|A0A2P4HQB8_QUESU (F-box/lrr-repeat protein OS=Quercus suber OX=58331 GN=CFP56_08901 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 6.2e-157
Identity = 298/515 (57.86%), Postives = 371/515 (72.04%), Query Frame = 0


Query: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60
           +NDD+L NI  RLPA +FA+AACV+K+WN  C+R L RPK ASA+SLNPSLH AV+EV  
Sbjct: 19  INDDVLQNILGRLPALTFASAACVNKSWNRVCSRFLTRPKLASALSLNPSLHEAVKEVFD 78

Query: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120
           KVLSEPIRPQFAIA +GV+F+L+  H LITE LG   P+ITNAA GIIGVDA T+ ++EV
Sbjct: 79  KVLSEPIRPQFAIAFIGVQFNLKETHRLITEKLGGEIPIITNAASGIIGVDAKTNVLREV 138

Query: 121 KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVMD 180
           KWEL  +     ++YN++ N NRGIVL VGF+PG KV A+ L+R  K +++A+ DKFV+D
Sbjct: 139 KWELGDEDGSNCEEYNTVSNLNRGIVLVVGFVPGLKVAAVPLIRPKKGNQMAMVDKFVID 198

Query: 181 IRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRRTT 240
           I +YTASVS  TS + II+FGDQ  DMKP+IAK+D AM EET IVGDA G FL +S  ++
Sbjct: 199 IMNYTASVSGCTSATGIIMFGDQTIDMKPVIAKMDHAMPEETTIVGDASGSFLFRSGDSS 258

Query: 241 NEING--FSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSKFT 300
           +  +G  +   AVALV ARDK     VGET F+ T STG IPFGP+L AVS  V+    +
Sbjct: 259 HSYSGDLYFFDAVALVFARDKEKSHGVGETQFYVTLSTGVIPFGPQLTAVSVRVKDQGCS 318

Query: 301 WLSAFMEGDDEILHGQSILKDLQEEIEYDDLE--TDMFIGVTQNRKQSIGSQRLGPSKSL 360
           WLSA MEG  EIL GQ +L  + E ++ D+++   D++IGVTQ+R+ SIGS +L  + SL
Sbjct: 319 WLSASMEGYHEILGGQDLLDSINEVMDQDEIDESPDLYIGVTQHRECSIGSVQLRSATSL 378

Query: 361 AMYKVLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPKTNAAA 420
           A Y+VLGGD QYFVVDGVGI+PGDSFLFYHSDSETAS+S +  FEDL  L    K     
Sbjct: 379 AFYEVLGGDNQYFVVDGVGIKPGDSFLFYHSDSETASASCANVFEDLEVLKTGSKDKDHR 438

Query: 421 SSVFSAG---KSEVFGGLIFSCHSRGQAYFGRPNVNSSQFSLNFPGVPFAGMFCAGEIGR 480
             +  A    K EVFGG IFSCH RG++YFGRPNV+S  FSLNFP VP AG+FC  EIGR
Sbjct: 439 DVIGVADNGPKKEVFGGFIFSCHLRGESYFGRPNVDSDPFSLNFPNVPLAGLFCTEEIGR 498

Query: 481 AVSRSIPDEEEVDEDDSVRRCLHVYSTVYLVLSHI 509
             S     ++E  E    R CLH+YSTVYLV+S++
Sbjct: 499 D-SPGSSAQKEGQEPSFGRCCLHIYSTVYLVMSYV 532

[Close]

BLAST of Carg07609 vs. TrEMBL
Match: tr|A0A2N9EB58|A0A2N9EB58_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4088 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.3e-154
Identity = 310/552 (56.16%), Postives = 375/552 (67.93%), Query Frame = 0


Query: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60
           +NDD+L NI  RLPA  FA+AACVSK+WN  CNRIL RPK ASA+SLNPSLH AV+EV  
Sbjct: 26  INDDVLQNILARLPALPFASAACVSKSWNRVCNRILTRPKLASALSLNPSLHGAVKEVFD 85

Query: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120
           KVL+EPIRPQFAIAC+GV+FSLE  H LITE LG   P+ITNAA GIIG DA T+E++EV
Sbjct: 86  KVLAEPIRPQFAIACIGVQFSLEETHKLITEKLGREIPIITNAASGIIGTDARTNELREV 145

Query: 121 KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVMD 180
           KWEL    + E   YN I N NRGIVL VGF+PG KV A+ LLRS K + V + DKFVMD
Sbjct: 146 KWELEDGPNCE--GYNMINNLNRGIVLVVGFVPGLKVAAVPLLRS-KETRVGMVDKFVMD 205

Query: 181 IRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKL-------------------------- 240
           I  YTASVS  TSP+ II+FGDQ+ DMKP+IAK+                          
Sbjct: 206 IMHYTASVSGCTSPTGIIMFGDQNIDMKPVIAKMGENHSLLYSLVYLLIFDMDCIEHFVQ 265

Query: 241 -------------DSAMAEETVIVGDACGCFLSKSRRTTNEING--FSLGAVALVIARDK 300
                        D AM EET IVGDA GCFL +S   ++  NG  +S  AVALV ARD+
Sbjct: 266 SIRVDKQFSYRVVDHAMPEETAIVGDASGCFLFRSGDGSHNYNGDLYSFDAVALVFARDR 325

Query: 301 NNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSKFTWLSAFMEGDDEILHGQSILKD 360
                +GET FH T STG +PFGP+L A S  V+GS+  WLSA +EG  EIL GQ +L D
Sbjct: 326 EKSHGIGETQFHVTLSTGVMPFGPQLTAQSVRVKGSE-CWLSASIEGCHEILDGQDLLDD 385

Query: 361 LQEEIEYDDLETDMFIGVTQNRKQSIGSQRLGPSKSLAMYKVLGGDQQYFVVDGVGIRPG 420
           + + +++D+   D++IGVTQ+R+ SIG ++L  + SL+ Y+VLGGD QYFVVDGVGI+PG
Sbjct: 386 INDVMDHDE-SPDLYIGVTQHRECSIGPEKLRSATSLSFYEVLGGDNQYFVVDGVGIQPG 445

Query: 421 DSFLFYHSDSETASSSSSIAFEDLATLNPPP--KTNAAASSVFSAG-KSEVFGGLIFSCH 480
           DSFLFYHSDSETASSS +  FEDL  L      K++     V   G K EVFGG IFSC+
Sbjct: 446 DSFLFYHSDSETASSSCANVFEDLEALKTGSNCKSHPDIRGVADNGVKKEVFGGFIFSCY 505

Query: 481 SRGQAYFGRPNVNSSQFSLNFPGVPFAGMFCAGEIGRAVSRSIPDEEEVDEDDSVRRCLH 509
            RG++YFGRPNV+S+ F LNFP VP AG+FC  EIGR  S     ++EV E    R CLH
Sbjct: 506 LRGESYFGRPNVDSAPFFLNFPNVPLAGLFCTEEIGRD-SPGTSTQKEVQEPHFGRCCLH 565

[Close]

BLAST of Carg07609 vs. TrEMBL
Match: tr|A0A067JRI5|A0A067JRI5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26431 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.1e-142
Identity = 284/521 (54.51%), Postives = 363/521 (69.67%), Query Frame = 0


Query: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60
           +++D++ NI  RLPA SFA+AACV+K+WN  C RIL RPK ASA+SLNPSLH AV+EV+ 
Sbjct: 20  VSEDVMENILSRLPALSFASAACVNKSWNEVCGRILSRPKLASALSLNPSLHDAVKEVLD 79

Query: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120
           KVLSEPI P FAIAC+G +FSLEV H LITE LGS  P ITN A GIIG DALT+++KEV
Sbjct: 80  KVLSEPIAPHFAIACIGKKFSLEVTHRLITEKLGSSVPTITNVANGIIGFDALTNKLKEV 139

Query: 121 KWELSGDYDVETQ-------DYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAV 180
           KWE S D D           D       +RGIVL VGF+PG KVDAI LLR  KV  + +
Sbjct: 140 KWESSDDEDDRDHGCGSNGPDSTGDSLLDRGIVLVVGFVPGLKVDAIPLLRPNKVPGIPL 199

Query: 181 ADKFVMDIRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFL 240
            DKFV DIR++TAS SD  SP+ II+FGD+  DMKP++A +D AM EETVIVG+A G FL
Sbjct: 200 VDKFVTDIRNFTASFSDSMSPAGIIVFGDEETDMKPVLANMDFAMDEETVIVGNANGRFL 259

Query: 241 SKSRRTT--NEINGFSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTS 300
             S   T  N  + + L AVALV A+DK+    +GET FH T STG IPFGP+L+AV   
Sbjct: 260 CSSADNTRNNHSDTYYLDAVALVFAKDKHKSADIGETQFHVTLSTGVIPFGPQLQAVCVI 319

Query: 301 VRGSKFTWLSAFMEGDDEILHGQSILKDLQEEIEYDDLET-DMFIGVTQNRKQSIGSQRL 360
            + S+ +WL+A MEG  EIL+G+ +L D+++++  DD ET D++IGV Q+R+ S G Q  
Sbjct: 320 AKDSERSWLTARMEGQPEILYGEGLLVDIKDQL--DDNETPDLYIGVVQHREFSTG-QSS 379

Query: 361 GPSKSLAMYKVLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPP 420
               SLA Y+VLGGD+++F+++GVG++PGD FLFYHSDS+TASSS   A+ +LA L    
Sbjct: 380 SSGASLAFYEVLGGDKEFFIINGVGVKPGDYFLFYHSDSDTASSSCGNAYRNLAILKEES 439

Query: 421 KTNAAASSVFSAG---KSEVFGGLIFSCHSRGQAYFGRPNVNSSQFSLNFPGVPFAGMFC 480
                  S   AG   + EV GGLIFS + RG+A++  P V++  FS NFPGVP AG+FC
Sbjct: 440 SNKNCLQSRNVAGNNEEKEVLGGLIFSGYPRGEAFY--PCVDTFPFSDNFPGVPLAGVFC 499

Query: 481 AGEIGRAVSRSIPDEEEVDEDDSVRRCLHVYSTVYLVLSHI 509
           +GEIGR  S SI  E+  DE +S R  LH +STVYLV+S++
Sbjct: 500 SGEIGRGSSSSISQED--DEQNSARCSLHYHSTVYLVMSYV 533

[Close]

BLAST of Carg07609 vs. TrEMBL
Match: tr|A0A061FZ25|A0A061FZ25_THECC (Skp2-like, FIST C domain, FIST domain, N-terminal isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_014667 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.1e-141
Identity = 282/517 (54.55%), Postives = 353/517 (68.28%), Query Frame = 0


Query: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60
           +NDDIL NI  RLPA SFA+AACVSK+WN  C+R+L RPK  SA+SLNPSL  AV+EV+ 
Sbjct: 7   VNDDILQNILSRLPALSFASAACVSKSWNKVCDRVLSRPKLVSALSLNPSLPDAVKEVLE 66

Query: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120
           KVLS PIRPQFAIA +G++FSLE  H LITE LGSRTPVITNA  GIIG DALT+ +KEV
Sbjct: 67  KVLSSPIRPQFAIASIGLQFSLEEAHQLITEKLGSRTPVITNATFGIIGRDALTNTMKEV 126

Query: 121 KWELSGDYD-VETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVM 180
           +W    + D   +Q  ++  N NRGIVL VGFLPG KVD + LLR  +     + DKF+M
Sbjct: 127 RWNFDPEEDNSNSQGSDAASNFNRGIVLIVGFLPGLKVDTVPLLRPKREPRFTMIDKFMM 186

Query: 181 DIRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKS--R 240
           DIRDYTASVS   +P+ IILFGDQH D+ P++A++D AM EETVIVGDA   FL +S   
Sbjct: 187 DIRDYTASVSGCIAPAGIILFGDQHTDLTPVLAEIDCAMPEETVIVGDASCRFLFRSGGN 246

Query: 241 RTTNEINGFSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSKF 300
             ++  + +   AVALV A DK+ P  +GET FH T STG +PFGPEL+AVS + +GS+ 
Sbjct: 247 SQSSITDLYYFDAVALVFAGDKDKPHGIGETRFHVTLSTGVMPFGPELRAVSVTAKGSEC 306

Query: 301 TWLSAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQSIGSQRLGPSKSLA 360
           +WL+A M G DEIL  Q +L D+ +E+  DD  TD++IGV Q R  SI  ++L     LA
Sbjct: 307 SWLTACMNGYDEILDSQRLLDDISDEM--DDESTDLYIGVIQKRPSSIEPEKLELRTYLA 366

Query: 361 MYKVLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPKTNAA-- 420
            Y+VLGGD++Y VVDGVGIRPGD+FLFYHSDS+TASSS   AFE+L  L     +     
Sbjct: 367 FYEVLGGDEEYLVVDGVGIRPGDTFLFYHSDSDTASSSCLNAFENLKVLKAASSSKTRYS 426

Query: 421 ---ASSVFSAGKSEVFGGLIFSCHSRGQAYFGRPNVNSSQFSLNFPGVPFAGMFCAGEIG 480
              A+        EVFGGL+FSCH RG++YF     +S  F  NFPG P AG+ C  EIG
Sbjct: 427 IRDAAXXXXXXXDEVFGGLMFSCHYRGESYF-----DSFPFYSNFPGAPLAGVVCNREIG 486

Query: 481 RAVSRSIPDEEEVDEDDSVRRC-LHVYSTVYLVLSHI 509
           R  + S     +  + +S  RC LHV +TV+LVLS +
Sbjct: 487 RDSTGSSTSMWQQAKGESPARCSLHVCTTVFLVLSFV 516

[Close]

BLAST of Carg07609 vs. TrEMBL
Match: tr|A0A1Q3DJ51|A0A1Q3DJ51_CEPFO (F-box domain-containing protein/FIST_C domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_35841 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.1e-140
Identity = 273/515 (53.01%), Postives = 349/515 (67.77%), Query Frame = 0


Query: 1   MNDDILHNIFRRLPARSFAAAACVSKTWNSTCNRILRRPKFASAVSLNPSLHVAVEEVVH 60
           +N+DIL NI +RLPA SF++AACVSK W + C+ IL +PK ASA+SLNPSLH+A++EV+ 
Sbjct: 28  VNEDILQNILKRLPAVSFSSAACVSKCWYNVCSTILSKPKLASALSLNPSLHIALKEVLD 87

Query: 61  KVLSEPIRPQFAIACVGVEFSLEVVHHLITEALGSRTPVITNAARGIIGVDALTDEVKEV 120
           KVLSEPIRP FAIAC   +F L+  H  IT+ALG   P+IT+AA G+IG+DALT+E+KEV
Sbjct: 88  KVLSEPIRPHFAIACTATQFCLQETHQRITQALGPGIPIITSAANGVIGIDALTNELKEV 147

Query: 121 KWELSGDYDVETQDYNSIFNRNRGIVLAVGFLPGFKVDAISLLRSIKVSEVAVADKFVMD 180
           KW+   D D   + Y+   N NRG+VL VGF+PG KV AI LLR +K   V +  KFV D
Sbjct: 148 KWDSDDDDDPIPEGYDFQSNLNRGVVLVVGFVPGLKVGAIPLLR-LKKDPVPMVKKFVTD 207

Query: 181 IRDYTASVSDFTSPSCIILFGDQHEDMKPIIAKLDSAMAEETVIVGDACGCFLSKSRRTT 240
           I+DYTASVS  TSP  IILFGDQ  DMKPI+A LD AM EETVIVGDA  CFL +S   T
Sbjct: 208 IKDYTASVSGGTSPVGIILFGDQSVDMKPILADLDYAMPEETVIVGDASSCFLIRSGENT 267

Query: 241 NEING----FSLGAVALVIARDKNNPEAVGETIFHFTSSTGTIPFGPELKAVSTSVRGSK 300
               G    +   A ALV AR++N    +GET FH T STG +PFGPELKAVS  ++G++
Sbjct: 268 QNYCGDEDLYMSDAAALVFARERNKSPDIGETQFHVTLSTGVLPFGPELKAVSVRMKGAE 327

Query: 301 FTWLSAFMEGDDEILHGQSILKDLQEEIEYDDLETDMFIGVTQNRKQ-SIGSQRLGPSKS 360
            +WL A +E  +EIL G  +L D+ + +  DD   D++IGVTQ RK+ S+GS++     +
Sbjct: 328 CSWLLAEIEETNEILDGTRLLDDIIDML--DDESLDLYIGVTQQRKKSSLGSEKSKLEAN 387

Query: 361 LAMYKVLGGDQQYFVVDGVGIRPGDSFLFYHSDSETASSSSSIAFEDLATLNPPPK---- 420
           L  Y+V+GGD +Y V++G+GI+PGDSF+FYHSD ETASSS    +++L   +   K    
Sbjct: 388 LTFYEVMGGDSEYLVINGIGIKPGDSFIFYHSDHETASSSCGNVYKNLGFFSKDEKKGNI 447

Query: 421 TNAAASSVFSAGKSEVFGGLIFSCHSRGQAYFGRPNVNSSQFSLNFPGVPFAGMFCAGEI 480
           ++  +          VFGGLIFSC  RG+++FG PNV+S  F  NFP VP AG+FC GEI
Sbjct: 448 SHHLSGVTXXXXXXXVFGGLIFSCCHRGESFFGLPNVDSQPFCKNFPRVPVAGVFCGGEI 507

Query: 481 GRAVSRSIPDEEEVDEDDSVRRCLHVYSTVYLVLS 507
           GRA S               R CLHVYSTVYLV+S
Sbjct: 508 GRA-SXXXXXXXXXXXXXXARCCLHVYSTVYLVMS 538

The following BLAST results are available for this feature:

BLAST of Carg07609 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924041.1	1.0e-291	99.22	F-box/LRR-repeat protein At5g63520-like isoform X2 [Cucurbita moschata]	[more]
XP_022924040.1	3.2e-290	98.84	F-box/LRR-repeat protein At5g63520-like isoform X1 [Cucurbita moschata]	[more]
XP_023519918.1	1.2e-289	98.64	F-box/LRR-repeat protein At5g63520-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001167.1	1.3e-275	93.97	LOW QUALITY PROTEIN: F-box/LRR-repeat protein At5g63520-like [Cucurbita maxima]	[more]
XP_022137117.1	4.1e-221	75.58	F-box/LRR-repeat protein At5g63520 [Momordica charantia]	[more]

BLAST of Carg07609 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63520.1	2.7e-89	40.08	F-box domain, Skp2-like (InterPro:IPR022364), FIST C domain (InterPro:IPR019494)...	[more]

BLAST of Carg07609 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FMV0\|FBL91_ARATH	4.8e-88	40.08	F-box/LRR-repeat protein At5g63520 OS=Arabidopsis thaliana OX=3702 GN=At5g63520 ...	[more]

BLAST of Carg07609 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P4HQB8\|A0A2P4HQB8_QUESU	6.2e-157	57.86	F-box/lrr-repeat protein OS=Quercus suber OX=58331 GN=CFP56_08901 PE=4 SV=1	[more]
tr\|A0A2N9EB58\|A0A2N9EB58_FAGSY	1.3e-154	56.16	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4088 PE=4 SV=1	[more]
tr\|A0A067JRI5\|A0A067JRI5_JATCU	1.1e-142	54.51	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26431 PE=4 SV=1	[more]
tr\|A0A061FZ25\|A0A061FZ25_THECC	2.1e-141	54.55	Skp2-like, FIST C domain, FIST domain, N-terminal isoform 1 OS=Theobroma cacao O...	[more]
tr\|A0A1Q3DJ51\|A0A1Q3DJ51_CEPFO	4.1e-140	53.01	F-box domain-containing protein/FIST_C domain-containing protein OS=Cephalotus f...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR001810	F-box_dom
IPR019494	FIST_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07609-RA	Carg07609-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019494	FIST, C-domain	SMART	SM01204	FIST_C_2	coord: 316..474 e-value: 1.0E-9 score: 48.3
IPR019494	FIST, C-domain	PFAM	PF10442	FIST_C	coord: 375..473 e-value: 4.4E-8 score: 33.1
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 1..41 e-value: 1.2E-4 score: 31.5
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 2..41 e-value: 1.9E-8 score: 33.9
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 1..35 e-value: 3.8E-5 score: 25.5
None	No IPR available	PANTHER	PTHR14939:SF7	SUBFAMILY NOT NAMED	coord: 2..509
None	No IPR available	PANTHER	PTHR14939	FAMILY NOT NAMED	coord: 2..509
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 3..38

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07609	Cla002629	Watermelon (97103) v1	carwmB1003
Carg07609	ClCG03G003870	Watermelon (Charleston Gray)	carwcgB0980
Carg07609	CmaCh13G008140	Cucurbita maxima (Rimu)	carcmaB1393
Carg07609	CmaCh18G003110	Cucurbita maxima (Rimu)	carcmaB1397
Carg07609	CmoCh13G008440	Cucurbita moschata (Rifu)	carcmoB1349
Carg07609	CmoCh18G002250	Cucurbita moschata (Rifu)	carcmoB1350
Carg07609	Cp4.1LG09g09460	Cucurbita pepo (Zucchini)	carcpeB1396
Carg07609	Cp4.1LG20g03030	Cucurbita pepo (Zucchini)	carcpeB1401
Carg07609	Cla97C03G054990	Watermelon (97103) v2	carwmbB1060

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07609	Carg06803	Silver-seed gourd	carcarB481

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07609	Wax gourd	carwgoB1173
Carg07609	Wax gourd	carwgoB1177
Carg07609	Silver-seed gourd	carcarB395
Carg07609	Cucumber (Gy14) v2	carcgybB0989
Carg07609	Cucumber (Gy14) v1	carcgyB1122
Carg07609	Cucumber (Gy14) v1	carcgyB1124
Carg07609	Cucurbita maxima (Rimu)	carcmaB1391
Carg07609	Cucurbita maxima (Rimu)	carcmaB1392
Carg07609	Cucurbita moschata (Rifu)	carcmoB1346
Carg07609	Cucurbita moschata (Rifu)	carcmoB1348
Carg07609	Cucurbita pepo (Zucchini)	carcpeB1398
Carg07609	Cucurbita pepo (Zucchini)	carcpeB1402
Carg07609	Wild cucumber (PI 183967)	carcpiB1041
Carg07609	Cucumber (Chinese Long) v2	carcuB1017
Carg07609	Cucumber (Chinese Long) v3	carcucB1046
Carg07609	Cucumber (Chinese Long) v3	carcucB1050
Carg07609	Bottle gourd (USVL1VR-Ls)	carlsiB918
Carg07609	Melon (DHL92) v3.5.1	carmeB0978
Carg07609	Melon (DHL92) v3.6.1	carmedB0988
Carg07609	Watermelon (97103) v2	carwmbB1063