Carg07580 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07580
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ycf48-like protein
Location	Cucurbita_argyrosperma_scaffold_024 : 420399 .. 422284 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGGGAGAGTCAGATCGTCTTCTTCAGTGGATTCCTTGGAGCGGCCGCCTTCCAAGGTTCTTAAAGATGACCGTCTCTCCATCTACGGTTCGTTCTCTATCTTAATCTTTCTTTTTGATCTAATTATGGATTCACATTTATAATCTGCCGGTGTCTCCCTTATTCTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTGAACTCATACTTAAATTTAAATGTGATAATATGAATGGTTTCTCTACTATTTTCCGGTTCATTGCTCATTTGCGCTGGAGCGTTCATTCAGGTTATAGCGTCAGAGTTCCAGGAGAGATTAGTAGTTCGGCTTCTGTTTTCGGGTCTACATTATTGTGTGATTTGGCTTATCTTGGACAATTGATTTGAAATCCAACCTGTTCATTGATTGAATTATAATAAATTTTGAAATCTACTTCTCTAACTAAACATTAACTTATTCAATTTGTAAATTTACATACTAGCTACATCAGGAACTTATGTTTTTGGAATTTTATCATCATCAAGATGTGAGGTATACATTAGATTTTCCAATTATGGGCTATGCAAGCTTAGATTCCTCAAACTCTAACCAGATTGCCTATACATCCTCCAAACGAAGTTAATACGTAAGCATTCGACGATGTCTTTATTCGGAGAATTGTATATTTTGTCGAGCATTTCTTTTAAACAAAAAGGCATATCTCCTGTGACTGATATTCAGCCACAAATATTTTTTTAGGTTCAATTTTCAAAAACTATCCTCCCAAATTTTGGATAGTTCATCTTGAAAGTTGAATTTGTTTTCAAAATAAACTTGAAAAGTTTATTTGCTTATGTGTTATTTAAGTGAACAAATCTAAACATATATGGGATGTAGATTTGAGGTTAGTGTTAGCAAAAAAAAAAAAATAATAAAAAATAAAAAAATAAAAAAAAAAATAACTGTGCATTTGAAATGAGGAAGACGATATTATGTATGGCTCATAGATAATTTTTATTTATTTTTCATGTTTTTGTTTAGATTTGTTCACATAAATCTGAAGGTTGTTTTGAAACAAATTTCAAGTTTAGAGGTGTAATTGAATCTAACCCATAGTTAAAATAATATTTTTGATGTAATGTAAAGTTTTTCTGCTTTTTTGGAACCAACAAAGGTCTCTCTGTTTACTTCGGTAAGTTTTTATTTATCCTAGAAATGAATGATATTCTTCACTCTCTCTCGAAATGAGACTGCAGTCCAAAATCTGATGTGGGGGATGAAATAATATTGTAGTTATGGATTCAGATTAACAACCACAATCGTACAGAATTTTTTGAACATATCATTTAGTTCCTTCTTGCAGAGACTACCCTAAGGAAGCTTAAACTCGGTTCGCAACTCAACTCAATCCTACCCACGGCCAAGGATGATGCCTTAGAGGATGGAGAAACCAATTCTTGCTCATGTTCGTCGCGCACCGAGGCAATGAAAACAGAAGCATGCAACAGTCCAGCATGTTTTCCAAAGGGTTCTCATGAGTTAGCCAACCCAACTAAAGAGGATTTGATAACTGTAGATTCAGATTATTCGACAAGTACAACTTCTACACATGAAGCTTCCAGGGATTGTCAATCAACAGAACATTCAACGCAGCAGCGTAGGATGAAGAACTCTATTAAGTACCTATTCTCAAAGTACAAGAATTCTCCAGGAATTTCAACAATTGTGGAGGAGGCGACGATGACGACGACGGAGGATATTTGTTGTATGGTTACGTCACCAAGTTCTAATGCATCTCAGTCTAGTGATAATATCAAGCTACATTCAAAGCAAGAATCCATTGGTTCTTCGACTATATCGTCGGAATTGAGTTCTATAACTAACTTGGTGGCATGA

mRNA sequence

ATGTTCGGGAGAGTCAGATCGTCTTCTTCAGTGGATTCCTTGGAGCGGCCGCCTTCCAAGGTTCTTAAAGATGACCGTCTCTCCATCTACGAGACTACCCTAAGGAAGCTTAAACTCGGTTCGCAACTCAACTCAATCCTACCCACGGCCAAGGATGATGCCTTAGAGGATGGAGAAACCAATTCTTGCTCATGTTCGTCGCGCACCGAGGCAATGAAAACAGAAGCATGCAACAGTCCAGCATGTTTTCCAAAGGGTTCTCATGAGTTAGCCAACCCAACTAAAGAGGATTTGATAACTGTAGATTCAGATTATTCGACAAGTACAACTTCTACACATGAAGCTTCCAGGGATTGTCAATCAACAGAACATTCAACGCAGCAGCGTAGGATGAAGAACTCTATTAAGTACCTATTCTCAAAGTACAAGAATTCTCCAGGAATTTCAACAATTGTGGAGGAGGCGACGATGACGACGACGGAGGATATTTGTTGTATGGTTACGTCACCAAGTTCTAATGCATCTCAGTCTAGTGATAATATCAAGCTACATTCAAAGCAAGAATCCATTGGTTCTTCGACTATATCGTCGGAATTGAGTTCTATAACTAACTTGGTGGCATGA

Coding sequence (CDS)

ATGTTCGGGAGAGTCAGATCGTCTTCTTCAGTGGATTCCTTGGAGCGGCCGCCTTCCAAGGTTCTTAAAGATGACCGTCTCTCCATCTACGAGACTACCCTAAGGAAGCTTAAACTCGGTTCGCAACTCAACTCAATCCTACCCACGGCCAAGGATGATGCCTTAGAGGATGGAGAAACCAATTCTTGCTCATGTTCGTCGCGCACCGAGGCAATGAAAACAGAAGCATGCAACAGTCCAGCATGTTTTCCAAAGGGTTCTCATGAGTTAGCCAACCCAACTAAAGAGGATTTGATAACTGTAGATTCAGATTATTCGACAAGTACAACTTCTACACATGAAGCTTCCAGGGATTGTCAATCAACAGAACATTCAACGCAGCAGCGTAGGATGAAGAACTCTATTAAGTACCTATTCTCAAAGTACAAGAATTCTCCAGGAATTTCAACAATTGTGGAGGAGGCGACGATGACGACGACGGAGGATATTTGTTGTATGGTTACGTCACCAAGTTCTAATGCATCTCAGTCTAGTGATAATATCAAGCTACATTCAAAGCAAGAATCCATTGGTTCTTCGACTATATCGTCGGAATTGAGTTCTATAACTAACTTGGTGGCATGA

Protein sequence

MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLNSILPTAKDDALEDGETNSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKEDLITVDSDYSTSTTSTHEASRDCQSTEHSTQQRRMKNSIKYLFSKYKNSPGISTIVEEATMTTTEDICCMVTSPSSNASQSSDNIKLHSKQESIGSSTISSELSSITNLVA

Homology

[Close]

BLAST of Carg07580 vs. NCBI nr
Match: XP_022923641.1 (uncharacterized protein LOC111431290 [Cucurbita moschata])

HSP 1 Score: 385.2 bits (988), Expect = 1.4e-103
Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLNSILPTAKDDALEDGET 60
           MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQL+SILPTAKDDALEDGET
Sbjct: 1   MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLDSILPTAKDDALEDGET 60

Query: 61  NSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKEDLITVDSDYSTSTTSTHEASRDCQ 120
           NSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKEDLITVDSDYSTSTTSTHEASRDCQ
Sbjct: 61  NSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKEDLITVDSDYSTSTTSTHEASRDCQ 120

Query: 121 STEHSTQQRRMKNSIKYLFSKYKNSPGISTIVEEATMTTTEDICCMVTSPSSNASQSSDN 180
           STEHSTQQRRMKNSIKYLFSKYKNSPGISTIVEEATMTTTEDICCMVTSPSSNASQSSDN
Sbjct: 121 STEHSTQQRRMKNSIKYLFSKYKNSPGISTIVEEATMTTTEDICCMVTSPSSNASQSSDN 180

Query: 181 IKLHSKQESIGSSTISSELSSITNLVA 208
           IKLHSKQESIGSSTISSELSSITNLVA
Sbjct: 181 IKLHSKQESIGSSTISSELSSITNLVA 207

[Close]

BLAST of Carg07580 vs. NCBI nr
Match: XP_023519058.1 (uncharacterized protein LOC111782528 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.8 bits (909), Expect = 2.0e-94
Identity = 193/207 (93.24%), Postives = 199/207 (96.14%), Query Frame = 0


Query: 1   MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLNSILPTAKDDALEDGET 60
           MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQL+SILPTAKDDALEDGET
Sbjct: 1   MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLDSILPTAKDDALEDGET 60

Query: 61  NSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKEDLITVDSDYSTSTTSTHEASRDCQ 120
           NSCSCSSRTEAMKTEACNSPACFPKGSHELANPTK+DLITVDSDYSTSTT THEASRDCQ
Sbjct: 61  NSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKKDLITVDSDYSTSTTYTHEASRDCQ 120

Query: 121 STEHSTQQRRMKNSIKYLFSKYKNSPGISTIVEEATMTTTEDICCMVTSPSSNASQSSDN 180
           STEHSTQQ RMKNS++YLFSKYKNS GISTI+EEAT T TEDICCMV  PSSNASQSSDN
Sbjct: 121 STEHSTQQCRMKNSVEYLFSKYKNSQGISTIMEEAT-TMTEDICCMVMLPSSNASQSSDN 180

Query: 181 IKLHSKQESIGSSTISSELSSITNLVA 208
           IKLHS+QESIGSSTISSE SSITNLVA
Sbjct: 181 IKLHSEQESIGSSTISSESSSITNLVA 206

[Close]

BLAST of Carg07580 vs. NCBI nr
Match: XP_023000809.1 (uncharacterized protein LOC111495147 [Cucurbita maxima])

HSP 1 Score: 279.6 bits (714), Expect = 8.4e-72
Identity = 160/207 (77.29%), Postives = 167/207 (80.68%), Query Frame = 0


Query: 1   MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLNSILPTAKDDALEDGET 60
           MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQL+SI P AKD ALEDGET
Sbjct: 1   MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLDSIPPKAKDGALEDGET 60

Query: 61  NSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKEDLITVDSDYSTSTTSTHEASRDCQ 120
           NS SCSSRT+AMKTEACNSPACF KGSHELANPTK+DL T+ SDYSTSTTSTHEASRDCQ
Sbjct: 61  NSFSCSSRTKAMKTEACNSPACFSKGSHELANPTKKDLKTIGSDYSTSTTSTHEASRDCQ 120

Query: 121 STEHSTQQRRMKNSIKYLFSKYKNSPGISTIVEEATMTTTEDICCMVTSPSSNASQSSDN 180
           STEHSTQQR+MKNSIKYLFS +KNS GISTI                            N
Sbjct: 121 STEHSTQQRKMKNSIKYLFSNHKNSQGISTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 180

Query: 181 IKLHSKQESIGSSTISSELSSITNLVA 208
            KLHS+QESIGS TISSE SSITNLVA
Sbjct: 181 TKLHSEQESIGSLTISSESSSITNLVA 207

[Close]

BLAST of Carg07580 vs. NCBI nr
Match: XP_022137500.1 (uncharacterized protein LOC111008931 [Momordica charantia])

HSP 1 Score: 212.6 bits (540), Expect = 1.3e-51
Identity = 127/188 (67.55%), Postives = 149/188 (79.26%), Query Frame = 0


Query: 1   MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLNSILPTAKDDALEDGET 60
           MFGR+RSSSS+DSLERPPSK+LKDD LSIYE TL KLKLGSQ  S  PT K+DALEDGET
Sbjct: 1   MFGRIRSSSSLDSLERPPSKILKDDCLSIYEATLVKLKLGSQRESSPPT-KEDALEDGET 60

Query: 61  NSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKEDLITVDSDYST-STTSTHEASRDC 120
           ++ S S   EAMKTE  N+PA FPKGSHELA+  KEDL+T+DSDYST STTST EAS DC
Sbjct: 61  DTNSSSLSAEAMKTECYNNPASFPKGSHELADSPKEDLMTIDSDYSTASTTSTPEASEDC 120

Query: 121 QSTEHSTQQRRMKNSIKYLFSKYKNSPGISTIVEEATMTTTEDICCMVTSPSSNASQSSD 180
           QSTE+S  QRR+++SI YLFSK+KN P I TI+EE  M   ++  C    PSS+ASQS++
Sbjct: 121 QSTEYS-PQRRIRSSILYLFSKFKNPPAIQTIMEE--MKAEDNNYCAAMLPSSSASQSTN 180

Query: 181 NIKLHSKQ 188
           NI+LH KQ
Sbjct: 181 NIELHLKQ 184

[Close]

BLAST of Carg07580 vs. NCBI nr
Match: XP_004152589.1 (PREDICTED: uncharacterized protein LOC101211051 [Cucumis sativus] >KGN64380.1 hypothetical protein Csa_1G050190 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 3.1e-50
Identity = 129/194 (66.49%), Postives = 146/194 (75.26%), Query Frame = 0


Query: 1   MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLNSILPTAKDDALEDGET 60
           MFGR+RSSSS DSLERPPSK+LKDD LSIYETTL KLKLGSQL+S  P  K+DALEDGE 
Sbjct: 1   MFGRIRSSSSPDSLERPPSKILKDDCLSIYETTLMKLKLGSQLDS-SPPIKEDALEDGEI 60

Query: 61  NSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKEDLITVDSDYSTSTTSTHEASRDCQ 120
           +S SCS   EAM TEAC S   FPK S+EL   TKED++TVDSDY T      E   DCQ
Sbjct: 61  DSDSCSLSNEAMNTEACTS---FPKDSNELVKSTKEDIMTVDSDYLTL-----ETFEDCQ 120

Query: 121 STEHSTQQRRMKNSIKYLFSKYKNSPGISTIVEEATMTTTEDICCMVTSPSSNASQSSDN 180
           STE ST QRRM NSI YLFSK+KNS  ISTI+EE   TTTED C +V SP  +AS S+ +
Sbjct: 121 STERST-QRRMTNSILYLFSKFKNSSEISTIMEEP--TTTEDFCSVVMSPCPSASGSTSD 180

Query: 181 IKLHSKQESIGSST 195
           ++LHS+QESI SST
Sbjct: 181 VELHSEQESIASST 182

[Close]

BLAST of Carg07580 vs. TAIR10
Match: AT3G48490.1 (unknown protein)

HSP 1 Score: 49.3 bits (116), Expect = 3.3e-06
Identity = 49/145 (33.79%), Postives = 66/145 (45.52%), Query Frame = 0


Query: 1   MFGRVR-SSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLNSILPTAKDDALEDGE 60
           MFGR+R   S  D LER P+K++KDD LS+YE+TL KLK GS                  
Sbjct: 1   MFGRLRPPPSPPDCLERYPAKIIKDDPLSVYESTLLKLKQGS------------------ 60

Query: 61  TNSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKEDLITVDSDYSTSTTSTHEASRDC 120
           T   + SS TE               G   L++ +   +++ D    T    TH+A    
Sbjct: 61  TRQDTTSSETE---------------GEENLSSTSSSHVLSSD----TQLGDTHDAMA-I 107

Query: 121 QSTEHSTQQRRMKNSIKYLFSKYKN 145
            S E S Q +    S+  +FSKYKN
Sbjct: 121 DSCESSKQIKSKNPSVLSMFSKYKN 107

[Close]

BLAST of Carg07580 vs. TrEMBL
Match: tr|A0A0A0LR39|A0A0A0LR39_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050190 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-50
Identity = 129/194 (66.49%), Postives = 146/194 (75.26%), Query Frame = 0


Query: 1   MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLNSILPTAKDDALEDGET 60
           MFGR+RSSSS DSLERPPSK+LKDD LSIYETTL KLKLGSQL+S  P  K+DALEDGE 
Sbjct: 1   MFGRIRSSSSPDSLERPPSKILKDDCLSIYETTLMKLKLGSQLDS-SPPIKEDALEDGEI 60

Query: 61  NSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKEDLITVDSDYSTSTTSTHEASRDCQ 120
           +S SCS   EAM TEAC S   FPK S+EL   TKED++TVDSDY T      E   DCQ
Sbjct: 61  DSDSCSLSNEAMNTEACTS---FPKDSNELVKSTKEDIMTVDSDYLTL-----ETFEDCQ 120

Query: 121 STEHSTQQRRMKNSIKYLFSKYKNSPGISTIVEEATMTTTEDICCMVTSPSSNASQSSDN 180
           STE ST QRRM NSI YLFSK+KNS  ISTI+EE   TTTED C +V SP  +AS S+ +
Sbjct: 121 STERST-QRRMTNSILYLFSKFKNSSEISTIMEEP--TTTEDFCSVVMSPCPSASGSTSD 180

Query: 181 IKLHSKQESIGSST 195
           ++LHS+QESI SST
Sbjct: 181 VELHSEQESIASST 182

[Close]

BLAST of Carg07580 vs. TrEMBL
Match: tr|A0A1S3AY89|A0A1S3AY89_CUCME (uncharacterized protein LOC103484190 OS=Cucumis melo OX=3656 GN=LOC103484190 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.0e-46
Identity = 126/198 (63.64%), Postives = 144/198 (72.73%), Query Frame = 0


Query: 1   MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLNSILPTAKDDALEDGET 60
           MFGR+RSSSS+DSLERPPSK+LKDD LSIYETTL KLKLGSQL+S  P  K+DALEDGE 
Sbjct: 1   MFGRIRSSSSLDSLERPPSKILKDDCLSIYETTLMKLKLGSQLDS-SPPIKEDALEDGEI 60

Query: 61  NSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKEDLITVDSDYSTSTTSTHEASRDCQ 120
           +S SCS   EAM TEAC S   FPK S+ELA  TKED +TVDSD     + T E   DCQ
Sbjct: 61  DSDSCSLSNEAMNTEACTS---FPKDSNELAKSTKEDTMTVDSD-----SLTFETFEDCQ 120

Query: 121 STEHSTQQRRMKNSIKYLFSKYKNSPGISTIVEEATMTTTEDICCMVTSPSSNASQSSDN 180
           S+E ST QRRMKNSI YLFSK+KNS  IST +EE T              SS+ASQS+ +
Sbjct: 121 SSECST-QRRMKNSILYLFSKFKNSSEISTTMEELT--------------SSSASQSTSD 174

Query: 181 IKLHSKQESIGSSTISSE 199
           + LHS+QESI SST+SSE
Sbjct: 181 VGLHSEQESIVSSTMSSE 174

[Close]

BLAST of Carg07580 vs. TrEMBL
Match: tr|E5GBW4|E5GBW4_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.0e-46
Identity = 126/198 (63.64%), Postives = 144/198 (72.73%), Query Frame = 0


Query: 1   MFGRVRSSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLNSILPTAKDDALEDGET 60
           MFGR+RSSSS+DSLERPPSK+LKDD LSIYETTL KLKLGSQL+S  P  K+DALEDGE 
Sbjct: 1   MFGRIRSSSSLDSLERPPSKILKDDCLSIYETTLMKLKLGSQLDS-SPPIKEDALEDGEI 60

Query: 61  NSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKEDLITVDSDYSTSTTSTHEASRDCQ 120
           +S SCS   EAM TEAC S   FPK S+ELA  TKED +TVDSD     + T E   DCQ
Sbjct: 61  DSDSCSLSNEAMNTEACTS---FPKDSNELAKSTKEDTMTVDSD-----SLTFETFEDCQ 120

Query: 121 STEHSTQQRRMKNSIKYLFSKYKNSPGISTIVEEATMTTTEDICCMVTSPSSNASQSSDN 180
           S+E ST QRRMKNSI YLFSK+KNS  IST +EE T              SS+ASQS+ +
Sbjct: 121 SSECST-QRRMKNSILYLFSKFKNSSEISTTMEELT--------------SSSASQSTSD 174

Query: 181 IKLHSKQESIGSSTISSE 199
           + LHS+QESI SST+SSE
Sbjct: 181 VGLHSEQESIVSSTMSSE 174

[Close]

BLAST of Carg07580 vs. TrEMBL
Match: tr|W9S1G1|W9S1G1_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006919 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.1e-17
Identity = 74/196 (37.76%), Postives = 111/196 (56.63%), Query Frame = 0


Query: 1   MFGRVR-SSSSVDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLNSILPTAKDDALEDGE 60
           MFG++R S SS++SL+RPPSK+LKDD LSIYE TL KLK GS+ +S  P+ +   + + +
Sbjct: 1   MFGKIRVSPSSLESLDRPPSKILKDDSLSIYEATLVKLKQGSRRDSSPPSKQ---IGNVD 60

Query: 61  TNSCSCSSRTEAMKTEACNSPACFPKGSHELANPTKEDLITVDSDYSTSTTSTHEASRDC 120
             S S S+  E MK +           S E      E++I++D+D  +S   TH +SR+ 
Sbjct: 61  VGSISSSTSLEPMKIDXXXXXXXXXXDSPEFTTSLNEEVISIDTDCYSSI--THPSSRNT 120

Query: 121 QSTEHSTQQRRMKNSIKYLFSKYKNSPGISTIVEEATMTTTEDICCMVTSPSSNASQSSD 180
                  +Q     SI YLFSK+KN+     +  E +++T ED   +  SP+ ++ QS D
Sbjct: 121 LLVSSPKEQDERTLSIIYLFSKFKNAHHAVNLASEDSVSTMEDGYSVGISPNFSSCQSLD 180

Query: 181 NIKLHSKQESIGSSTI 196
           + K  S+QE + S  I
Sbjct: 181 STKQQSEQEFVTSQVI 191

[Close]

BLAST of Carg07580 vs. TrEMBL
Match: tr|A0A2P6P548|A0A2P6P548_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0190901 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-16
Identity = 85/195 (43.59%), Postives = 115/195 (58.97%), Query Frame = 0


Query: 1   MFGRVRSSSS-VDSLERPPSKVLKDDRLSIYETTLRKLKLGSQLNSILPTAKDDALEDGE 60
           MFGRVR+SSS  DSLERPPSK+ KDD LSIYE TL KLKLGS+ N + P + +    D  
Sbjct: 1   MFGRVRASSSPADSLERPPSKIFKDDTLSIYEATLMKLKLGSKRN-LSPCSNEVGEMDAG 60

Query: 61  TNSCSCSSRTEAMKTEACNSPACFPKGSHEL-ANPTKEDLITVDSDYSTSTTSTHEASRD 120
           +NS S  S  E M  E  N  +     S +L A+  +E++ T+D+D S+ T+S   +S D
Sbjct: 61  SNSSSPDS--EPMNIEV-NCVSSGTSSSPDLVASSPQEEVATLDTDCSSETSSI--SSSD 120

Query: 121 CQSTEHSTQQRRMKNSIKYLFSKYKNS-PGISTIVEEATMTTTEDICCMVTSPSSNASQS 180
           C S   S Q R  + S+ YLFSK++ +   IS+   EA    +  I     SPSS+ S+S
Sbjct: 121 CNSGGTSKQPRSTEVSVLYLFSKFRRAHDAISSSSGEAMTIDSVGI-----SPSSSGSRS 180

Query: 181 SDNIKLHSKQESIGS 193
            +N +  S+QE I S
Sbjct: 181 LNNTEQQSEQECISS 184

The following BLAST results are available for this feature:

BLAST of Carg07580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923641.1	1.4e-103	99.52	uncharacterized protein LOC111431290 [Cucurbita moschata]	[more]
XP_023519058.1	2.0e-94	93.24	uncharacterized protein LOC111782528 [Cucurbita pepo subsp. pepo]	[more]
XP_023000809.1	8.4e-72	77.29	uncharacterized protein LOC111495147 [Cucurbita maxima]	[more]
XP_022137500.1	1.3e-51	67.55	uncharacterized protein LOC111008931 [Momordica charantia]	[more]
XP_004152589.1	3.1e-50	66.49	PREDICTED: uncharacterized protein LOC101211051 [Cucumis sativus] >KGN64380.1 hy...	[more]

BLAST of Carg07580 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G48490.1	3.3e-06	33.79	unknown protein	[more]

BLAST of Carg07580 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg07580 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LR39\|A0A0A0LR39_CUCSA	2.0e-50	66.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050190 PE=4 SV=1	[more]
tr\|A0A1S3AY89\|A0A1S3AY89_CUCME	4.0e-46	63.64	uncharacterized protein LOC103484190 OS=Cucumis melo OX=3656 GN=LOC103484190 PE=...	[more]
tr\|E5GBW4\|E5GBW4_CUCME	4.0e-46	63.64	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|W9S1G1\|W9S1G1_9ROSA	5.1e-17	37.76	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006919 PE=4 SV=1	[more]
tr\|A0A2P6P548\|A0A2P6P548_ROSCH	1.1e-16	43.59	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0190901 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07580-RA	Carg07580-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..194

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07580	Cla002592	Watermelon (97103) v1	carwmB1003
Carg07580	Csa1G050190	Cucumber (Chinese Long) v2	carcuB1017
Carg07580	MELO3C002337	Melon (DHL92) v3.5.1	carmeB0978
Carg07580	ClCG03G003530	Watermelon (Charleston Gray)	carwcgB0980
Carg07580	CSPI01G09240	Wild cucumber (PI 183967)	carcpiB1041
Carg07580	Cucsa.391800	Cucumber (Gy14) v1	carcgyB1124
Carg07580	CmaCh13G007830	Cucurbita maxima (Rimu)	carcmaB1393
Carg07580	CmoCh13G008150	Cucurbita moschata (Rifu)	carcmoB1349
Carg07580	Cp4.1LG09g09780	Cucurbita pepo (Zucchini)	carcpeB1396
Carg07580	Cp4.1LG20g03230	Cucurbita pepo (Zucchini)	carcpeB1401
Carg07580	MELO3C002337.2	Melon (DHL92) v3.6.1	carmedB0988
Carg07580	CsaV3_1G009340	Cucumber (Chinese Long) v3	carcucB1046
Carg07580	Cla97C03G054610	Watermelon (97103) v2	carwmbB1060

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07580	Carg06777	Silver-seed gourd	carcarB481

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07580	Silver-seed gourd	carcarB395
Carg07580	Cucumber (Gy14) v2	carcgybB0989
Carg07580	Cucumber (Gy14) v1	carcgyB1122
Carg07580	Cucurbita maxima (Rimu)	carcmaB1391
Carg07580	Cucurbita maxima (Rimu)	carcmaB1395
Carg07580	Cucurbita moschata (Rifu)	carcmoB1350
Carg07580	Cucurbita moschata (Rifu)	carcmoB1346
Carg07580	Cucurbita pepo (Zucchini)	carcpeB1398
Carg07580	Bottle gourd (USVL1VR-Ls)	carlsiB918
Carg07580	Wax gourd	carwgoB1178