CSPI01G09240 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGAAATCTGAAATCTGCGTTTTCATTTCTTCTTCCAAAGAAAGCAGCTGAGGCTTAGGGCTTACTGATTGGGACGATGTTCGGAAGGATTAGATCTTCTTCTTCACCGGATTCCTTGGAGCGGCCGCCTTCCAAGATTCTTAAAGATGATTGTCTTTCCATCTATGGTTCCTTCTCTTTCTCATTCGATATTTCTTTTTAATCTAATTGTGTTCACATTTATGATCTGCTGATGTCTTGATCTTTACTCTCTTTTTTTTTTTTTTCTTTCTTTCTCTCGTGTTCTTGCTCGAATTTATGTGTTATGATTTGCCTTTTCCACTCTCCGGAAATCAATTTTTGTTTGGATTTGAAAATTGGCATGTTCTAGTGCCTTGGCCTTTTGCTTTCTTTTAGTTATTCGGGTTCTTAGCTACTTAGTTGACTGAAAACCAATGAATTGGTTAGAGGTAAGTGTTGGATATCTTGTTCTAAGGATGTTAAGAAGTAGGAATAGTTAGATGTATTTAGTTACCAAGAAGTTCGAGGAATTGGGCGCGATAATTTGAATGGAATATTGATGACTGTCGAGAATGATTCTTGAATTTGATAAAGAGAAAAAAATGAATTGATTTTCTTTTCACTGTTTAAAACTTAGAAGAAGCTAGATTTGCTATGCCGGATTGTGTATTTGAGAGCTTGTATTCTCCGGGTCACAGTTCATTTTTGCCAGAGAGTTTGTTCAGGTTATAGCGTCCGAGGTCCAGGGGAGATGATTAGTTCGGCTTCTGTTTAAGTGTCAACATTATTGTGTTACCATGAACAGATTGTTTAAAATCCCACTTCACTGATGAATTATAGGGGACGAAATAGTGTAGACTAATAGGATTTCAGATTTTGGGTTCTAAGACTTGTTTTATAAGAACAACAGTCGTATTACATTCTTCCAAGTTCTTATTTAGTTTCTTCTTGCAGAGACTACCTTAATGAAGCTTAAACTCGGTTCGCAACTGGATTCAAGTCCACCCATCAAGGAGGATGCTTTAGAGGATGGAGAAATTGATTCTGACTCATGTTCATTGAGCAATGAAGCAATGAACACAGACGCATGCACAAGTTTTCCCAAGGATTCTAATGAGTTAGTCAAGTCAACTAAAGAAGATATCATGACGGTTGATTCAGATTATTTGACACTTGAAACTTTTGAGGATTGTCAATCAACAGAACGTTCAACACAGCGTAGGATGACAAACTCCATTCTTTACCTATTCTCTAAATTCAAGAATTCTTCAGAAATTTCAACAATCATGGAGGAACCAACGACAACGGAAGACTTCTGTAGTGTGGTTATGTCACCAAGTCCTAGTGCATCTGGATCTACTTCCGATGTTGAGCTACATTCGGAGCAAGAATCGATTGCTTCTTCAACACAACTTGTTGGCATGACTTAGAAAAAAAAAACATTGGCCATTACAAATTCAGTCCCCTCTAGCAATGTGTTTTCATTCAAGTCTTCAAAATCTGTTTAAACCATGTTGTATTTTTATGGTCACTATGATGAAGGTGTGGGGAATGTACATCTATTATATCTGAGCACAAGCTTAATTATGAGCAACTTGTAACTTGCACCTCTGTCATTGTCGAGTTTTGAAATATCAATATCAAAAGAAATAGTGAAGTCATAATTGCACA ATGTTCGGAAGGATTAGATCTTCTTCTTCACCGGATTCCTTGGAGCGGCCGCCTTCCAAGATTCTTAAAGATGATTGTCTTTCCATCTATGAGACTACCTTAATGAAGCTTAAACTCGGTTCGCAACTGGATTCAAGTCCACCCATCAAGGAGGATGCTTTAGAGGATGGAGAAATTGATTCTGACTCATGTTCATTGAGCAATGAAGCAATGAACACAGACGCATGCACAAGTTTTCCCAAGGATTCTAATGAGTTAGTCAAGTCAACTAAAGAAGATATCATGACGGTTGATTCAGATTATTTGACACTTGAAACTTTTGAGGATTGTCAATCAACAGAACGTTCAACACAGCGTAGGATGACAAACTCCATTCTTTACCTATTCTCTAAATTCAAGAATTCTTCAGAAATTTCAACAATCATGGAGGAACCAACGACAACGGAAGACTTCTGTAGTGTGGTTATGTCACCAAGTCCTAGTGCATCTGGATCTACTTCCGATGTTGAGCTACATTCGGAGCAAGAATCGATTGCTTCTTCAACACAACTTGTTGGCATGACTTAG ATGTTCGGAAGGATTAGATCTTCTTCTTCACCGGATTCCTTGGAGCGGCCGCCTTCCAAGATTCTTAAAGATGATTGTCTTTCCATCTATGAGACTACCTTAATGAAGCTTAAACTCGGTTCGCAACTGGATTCAAGTCCACCCATCAAGGAGGATGCTTTAGAGGATGGAGAAATTGATTCTGACTCATGTTCATTGAGCAATGAAGCAATGAACACAGACGCATGCACAAGTTTTCCCAAGGATTCTAATGAGTTAGTCAAGTCAACTAAAGAAGATATCATGACGGTTGATTCAGATTATTTGACACTTGAAACTTTTGAGGATTGTCAATCAACAGAACGTTCAACACAGCGTAGGATGACAAACTCCATTCTTTACCTATTCTCTAAATTCAAGAATTCTTCAGAAATTTCAACAATCATGGAGGAACCAACGACAACGGAAGACTTCTGTAGTGTGGTTATGTCACCAAGTCCTAGTGCATCTGGATCTACTTCCGATGTTGAGCTACATTCGGAGCAAGAATCGATTGCTTCTTCAACACAACTTGTTGGCATGACTTAG
BLAST of CSPI01G09240 vs. TrEMBL
Match: A0A0A0LR39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050190 PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 7.4e-94 Identity = 185/188 (98.40%), Postives = 187/188 (99.47%), Query Frame = 1
BLAST of CSPI01G09240 vs. TrEMBL
Match: E5GBW4_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 8.8e-71 Identity = 155/182 (85.16%), Postives = 157/182 (86.26%), Query Frame = 1
BLAST of CSPI01G09240 vs. TrEMBL
Match: A9P9G0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s10300g PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.3e-21 Identity = 85/187 (45.45%), Postives = 106/187 (56.68%), Query Frame = 1
BLAST of CSPI01G09240 vs. TrEMBL
Match: W9S1G1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006919 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.9e-20 Identity = 82/190 (43.16%), Postives = 112/190 (58.95%), Query Frame = 1
BLAST of CSPI01G09240 vs. TrEMBL
Match: A0A067KGJ3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11345 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.5e-17 Identity = 80/179 (44.69%), Postives = 107/179 (59.78%), Query Frame = 1
BLAST of CSPI01G09240 vs. TAIR10
Match: AT3G48490.1 (AT3G48490.1 unknown protein) HSP 1 Score: 59.7 bits (143), Expect = 2.3e-09 Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 1
BLAST of CSPI01G09240 vs. NCBI nr
Match: gi|449469765|ref|XP_004152589.1| (PREDICTED: uncharacterized protein LOC101211051 [Cucumis sativus]) HSP 1 Score: 351.3 bits (900), Expect = 1.1e-93 Identity = 185/188 (98.40%), Postives = 187/188 (99.47%), Query Frame = 1
BLAST of CSPI01G09240 vs. NCBI nr
Match: gi|659067423|ref|XP_008439378.1| (PREDICTED: lisH domain-containing protein C1711.05 [Cucumis melo]) HSP 1 Score: 274.6 bits (701), Expect = 1.3e-70 Identity = 155/182 (85.16%), Postives = 157/182 (86.26%), Query Frame = 1
BLAST of CSPI01G09240 vs. NCBI nr
Match: gi|224133858|ref|XP_002321678.1| (hypothetical protein POPTR_0015s10300g [Populus trichocarpa]) HSP 1 Score: 111.3 bits (277), Expect = 1.9e-21 Identity = 85/187 (45.45%), Postives = 106/187 (56.68%), Query Frame = 1
BLAST of CSPI01G09240 vs. NCBI nr
Match: gi|703132672|ref|XP_010105181.1| (hypothetical protein L484_006919 [Morus notabilis]) HSP 1 Score: 107.5 bits (267), Expect = 2.7e-20 Identity = 82/190 (43.16%), Postives = 112/190 (58.95%), Query Frame = 1
BLAST of CSPI01G09240 vs. NCBI nr
Match: gi|743831635|ref|XP_011024078.1| (PREDICTED: uncharacterized protein LOC105125369 [Populus euphratica]) HSP 1 Score: 104.0 bits (258), Expect = 3.0e-19 Identity = 82/187 (43.85%), Postives = 103/187 (55.08%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |