Carg07302 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07302
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Calcium-binding EF-hand family protein
Location	Cucurbita_argyrosperma_scaffold_019 : 28821 .. 29249 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTGGTCGTAATAGACGGATCGACGGTGAGGAACTTCGTGAACGACGAGTCTCATTTCAAGAAGAGCGTGGAAGATGCATTTGCCGCTCTGGATCTCAACAACGACGGTGTTCTCTCTCGAGCGGAGCTCCGCAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCATTTCGGTGTCGACGTCGCTACTCCGCCAGAGCAATTAACTCAACTCTACGATTCTATTTTCGAGCAGTTCGATTGCGACAAAAGCGGAAGCGTCGATGCGGATGAGTTTCGGACGGAGATGAAGAACATCTTGCTCGCAATCGCCGATGGATTAGGCTCGTCTCCGATTCAGATGGCGCTCAGCGACGACGATCAGAGTTTCCTAAAGCAAGCCGCGGATCTGGAAGCTTCCAAACTCGCTCAATCCTCGGCCTGA

mRNA sequence

ATGACGGTGGTCGTAATAGACGGATCGACGGTGAGGAACTTCGTGAACGACGAGTCTCATTTCAAGAAGAGCGTGGAAGATGCATTTGCCGCTCTGGATCTCAACAACGACGGTGTTCTCTCTCGAGCGGAGCTCCGCAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCATTTCGGTGTCGACGTCGCTACTCCGCCAGAGCAATTAACTCAACTCTACGATTCTATTTTCGAGCAGTTCGATTGCGACAAAAGCGGAAGCGTCGATGCGGATGAGTTTCGGACGGAGATGAAGAACATCTTGCTCGCAATCGCCGATGGATTAGGCTCGTCTCCGATTCAGATGGCGCTCAGCGACGACGATCAGAGTTTCCTAAAGCAAGCCGCGGATCTGGAAGCTTCCAAACTCGCTCAATCCTCGGCCTGA

Coding sequence (CDS)

ATGACGGTGGTCGTAATAGACGGATCGACGGTGAGGAACTTCGTGAACGACGAGTCTCATTTCAAGAAGAGCGTGGAAGATGCATTTGCCGCTCTGGATCTCAACAACGACGGTGTTCTCTCTCGAGCGGAGCTCCGCAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCATTTCGGTGTCGACGTCGCTACTCCGCCAGAGCAATTAACTCAACTCTACGATTCTATTTTCGAGCAGTTCGATTGCGACAAAAGCGGAAGCGTCGATGCGGATGAGTTTCGGACGGAGATGAAGAACATCTTGCTCGCAATCGCCGATGGATTAGGCTCGTCTCCGATTCAGATGGCGCTCAGCGACGACGATCAGAGTTTCCTAAAGCAAGCCGCGGATCTGGAAGCTTCCAAACTCGCTCAATCCTCGGCCTGA

Protein sequence

MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSDDDQSFLKQAADLEASKLAQSSA

Homology

[Close]

BLAST of Carg07302 vs. NCBI nr
Match: XP_022949190.1 (uncharacterized protein LOC111452614 [Cucurbita moschata] >XP_023523581.1 uncharacterized protein LOC111787767 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.1 bits (697), Expect = 5.4e-70
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60
           MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG
Sbjct: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60

Query: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120
           VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD
Sbjct: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120

Query: 121 DDQSFLKQAADLEASKLAQSSA 143
           DDQSFLKQAADLEASKLAQSSA
Sbjct: 121 DDQSFLKQAADLEASKLAQSSA 142

[Close]

BLAST of Carg07302 vs. NCBI nr
Match: XP_022998500.1 (uncharacterized protein LOC111493114 [Cucurbita maxima])

HSP 1 Score: 271.2 bits (692), Expect = 2.0e-69
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60
           MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG
Sbjct: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60

Query: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120
           VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD
Sbjct: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120

Query: 121 DDQSFLKQAADLEASKLAQSSA 143
           DDQSFLKQAADLEASKLAQ SA
Sbjct: 121 DDQSFLKQAADLEASKLAQPSA 142

[Close]

BLAST of Carg07302 vs. NCBI nr
Match: XP_022983603.1 (uncharacterized protein LOC111482160 [Cucurbita maxima] >XP_022983604.1 uncharacterized protein LOC111482160 [Cucurbita maxima])

HSP 1 Score: 257.3 bits (656), Expect = 3.1e-65
Identity = 132/142 (92.96%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60
           M VVVIDGSTVRNFVNDESHFKKSV++AFAALDLNNDGVLSR+ELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120
           VDV TPPE+LTQLYDSIFEQFDCDKSG+VDA+EFRTEMKNILLAIADGLGSSPIQMAL D
Sbjct: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 DDQSFLKQAADLEASKLAQSSA 143
            DQSFLKQAADLEASKLAQSSA
Sbjct: 121 GDQSFLKQAADLEASKLAQSSA 142

[Close]

BLAST of Carg07302 vs. NCBI nr
Match: XP_023526874.1 (uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.1 bits (653), Expect = 6.8e-65
Identity = 131/142 (92.25%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60
           M VVVIDGSTVRNFVNDESHFKKSV++AFA+LDLNNDGVLSR+ELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120
           VDV TPPE+LTQLYDSIFEQFDCDKSG+VDA+EFRTEMKNILLAIADGLGSSPIQMAL D
Sbjct: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 DDQSFLKQAADLEASKLAQSSA 143
            DQSFLKQAADLEASKLAQSSA
Sbjct: 121 GDQSFLKQAADLEASKLAQSSA 142

[Close]

BLAST of Carg07302 vs. NCBI nr
Match: XP_022934103.1 (uncharacterized protein LOC111441377 [Cucurbita moschata])

HSP 1 Score: 255.8 bits (652), Expect = 8.9e-65
Identity = 131/142 (92.25%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60
           M VVVIDGSTVRNFVNDESHFKKSV++AFAALDLNNDGVLSR+ELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120
           VDV TPPE+LTQLYDSIFE+FDCDKSG+VDA+EFRTEMKNILLAIADGLGSSPIQMAL D
Sbjct: 61  VDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 DDQSFLKQAADLEASKLAQSSA 143
            DQSFLKQAADLEASKLAQSSA
Sbjct: 121 GDQSFLKQAADLEASKLAQSSA 142

[Close]

BLAST of Carg07302 vs. TAIR10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-53
Identity = 103/142 (72.54%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60
           M VV+IDGSTVR+FV+DE  FKKSV++ FAALDLN DGVLSR+ELRKAFE++RL+E+HFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120
           VDV TP ++LT LYDSIFE+FD D+SGSVD +EFR+EMK I+LAIADGLGS PI M L D
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 DDQSFLKQAADLEASKLAQSSA 143
           DD +FLK+AADLEASKL ++S+
Sbjct: 121 DDDNFLKKAADLEASKLEKASS 142

[Close]

BLAST of Carg07302 vs. TAIR10
Match: AT5G28830.1 (calcium-binding EF hand family protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10
Identity = 35/119 (29.41%), Postives = 59/119 (49.58%), Query Frame = 0


Query: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60
           + V ++DG+ ++ F+ DE  F    E+ F  LD  + G L ++E+RKA         H G
Sbjct: 101 IVVSILDGTMLKMFLEDEDDFAMLAENLFTDLDEEDKGKLCKSEIRKAL-------VHMG 160

Query: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALS 120
           V++  PP     + D I ++ D D    +   +F   ++ +L  IAD L   PI + L+
Sbjct: 161 VEMGVPPLSEFPILDDIIKKHDADSDEELGQAQFAELLQQVLQEIADVLHEKPITIVLN 212

[Close]

BLAST of Carg07302 vs. TAIR10
Match: AT1G54530.1 (Calcium-binding EF hand family protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.0e-10
Identity = 38/121 (31.40%), Postives = 64/121 (52.89%), Query Frame = 0


Query: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60
           M   VI   T+  F++D   F+    D F  LDL+ +G+LS +ELR+    +  +E+   
Sbjct: 1   MIETVITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESE-- 60

Query: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120
                P ++   +Y++IFE+F  D    +    FR  +  IL A+A G+G+SP+ M + +
Sbjct: 61  ---VAPGDETDNVYNAIFERFGED----LVPKNFRDLIAEILTAMARGIGNSPVIMVVHN 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]

BLAST of Carg07302 vs. TAIR10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein)

HSP 1 Score: 53.9 bits (128), Expect = 9.3e-08
Identity = 36/118 (30.51%), Postives = 51/118 (43.22%), Query Frame = 0


Query: 5   VIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFGVDVA 64
           V+DGS +   V +E  F K VE  F  LD + DG LS  EL+ A      I    G+   
Sbjct: 14  VLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVAD---IGAALGLPAQ 73

Query: 65  TPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSDDD 123
                   +Y  +  +F       V   EF+  + +ILL +A GL   PI +   D +
Sbjct: 74  GTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGE 128

[Close]

BLAST of Carg07302 vs. TrEMBL
Match: tr|A0A0A0L9X6|A0A0A0L9X6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.1e-63
Identity = 128/141 (90.78%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60
           M VVV+DGSTVRNFVNDESHF KS++DAFA+LDLNNDGVLSR+ELRKAFETLRLIETHFG
Sbjct: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120
           VDVAT PEQLTQLYDSIFEQFDCDKSG+VDA+EFRTEMKNILLAIADGLGSSPIQMAL D
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 DDQSFLKQAADLEASKLAQSS 142
            DQSFLKQAADLEASKL QSS
Sbjct: 121 GDQSFLKQAADLEASKLRQSS 141

[Close]

BLAST of Carg07302 vs. TrEMBL
Match: tr|A0A1S3CGR2|A0A1S3CGR2_CUCME (uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.5e-63
Identity = 127/141 (90.07%), Postives = 134/141 (95.04%), Query Frame = 0


Query: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60
           M VVVIDGSTVRNFVNDE HF KS++DAFA+LDLNNDGVLSR+ELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120
           VDVAT PEQLTQLYDSIFEQFDCDKSG+VDA+EFRTEMKNILLAIADGLGSSPIQMAL D
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 DDQSFLKQAADLEASKLAQSS 142
            D+SFLKQAADLEASKL QSS
Sbjct: 121 GDRSFLKQAADLEASKLGQSS 141

[Close]

BLAST of Carg07302 vs. TrEMBL
Match: tr|B9REM6|B9REM6_RICCO (Calcium ion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1775940 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 5.3e-58
Identity = 117/141 (82.98%), Postives = 131/141 (92.91%), Query Frame = 0


Query: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60
           M VVVIDGSTVR+FVNDE+ FKKSV+++FA LDLNNDGVLSR+ELRKAFE+LRLIE+HFG
Sbjct: 1   MGVVVIDGSTVRDFVNDEAQFKKSVDESFAQLDLNNDGVLSRSELRKAFESLRLIESHFG 60

Query: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120
           +DV TPPEQLTQLYDSIFE+FDCDKSG+VD DEFRTE+K ILLAIADGLGSSPIQMAL D
Sbjct: 61  IDVVTPPEQLTQLYDSIFEKFDCDKSGTVDLDEFRTEIKKILLAIADGLGSSPIQMALED 120

Query: 121 DDQSFLKQAADLEASKLAQSS 142
           DDQ FLK+AADLEASKL + S
Sbjct: 121 DDQGFLKKAADLEASKLQKPS 141

[Close]

BLAST of Carg07302 vs. TrEMBL
Match: tr|A0A067JCA8|A0A067JCA8_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05261 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.2e-57
Identity = 117/140 (83.57%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60
           M VVVIDGSTVRNFV +E+HFKKSVED FA LDLNNDGVLSR+ELR+AFE+LRL+ETHFG
Sbjct: 1   MGVVVIDGSTVRNFVENEAHFKKSVEDTFAKLDLNNDGVLSRSELRRAFESLRLVETHFG 60

Query: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120
           VDV   PEQLTQLYDSIFE FDCDKSG+VD +EFRTE++ ILLAIADGLGSSPIQMAL D
Sbjct: 61  VDVTATPEQLTQLYDSIFESFDCDKSGTVDIEEFRTEVRKILLAIADGLGSSPIQMALED 120

Query: 121 DDQSFLKQAADLEASKLAQS 141
           DDQSFLKQAADLEASKL  S
Sbjct: 121 DDQSFLKQAADLEASKLQSS 140

[Close]

BLAST of Carg07302 vs. TrEMBL
Match: tr|A9PCU6|A9PCU6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G231100v3 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 8.5e-56
Identity = 112/142 (78.87%), Postives = 129/142 (90.85%), Query Frame = 0


Query: 1   MTVVVIDGSTVRNFVNDESHFKKSVEDAFAALDLNNDGVLSRAELRKAFETLRLIETHFG 60
           M VV+IDGSTVR+FVNDE+ F KSV++AF  LDLNNDGVLSR+ELRKAFETLRLIETHFG
Sbjct: 1   MGVVIIDGSTVRDFVNDEAQFNKSVDEAFTKLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATPPEQLTQLYDSIFEQFDCDKSGSVDADEFRTEMKNILLAIADGLGSSPIQMALSD 120
           VDVAT PE+LT LYDSIF++FDCD+SGSVD +E+R+E+K I+LAIADGLGSSPIQMAL D
Sbjct: 61  VDVATAPEELTNLYDSIFDKFDCDQSGSVDLEEYRSELKKIMLAIADGLGSSPIQMALED 120

Query: 121 DDQSFLKQAADLEASKLAQSSA 143
           DDQ F+KQAADLEASKL Q S+
Sbjct: 121 DDQGFIKQAADLEASKLPQQSS 142

The following BLAST results are available for this feature:

BLAST of Carg07302 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949190.1	5.4e-70	100.00	uncharacterized protein LOC111452614 [Cucurbita moschata] >XP_023523581.1 unchar...	[more]
XP_022998500.1	2.0e-69	99.30	uncharacterized protein LOC111493114 [Cucurbita maxima]	[more]
XP_022983603.1	3.1e-65	92.96	uncharacterized protein LOC111482160 [Cucurbita maxima] >XP_022983604.1 uncharac...	[more]
XP_023526874.1	6.8e-65	92.25	uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo]	[more]
XP_022934103.1	8.9e-65	92.25	uncharacterized protein LOC111441377 [Cucurbita moschata]	[more]

BLAST of Carg07302 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44310.1	1.5e-53	72.54	Calcium-binding EF-hand family protein	[more]
AT5G28830.1	1.2e-10	29.41	calcium-binding EF hand family protein	[more]
AT1G54530.1	2.0e-10	31.40	Calcium-binding EF hand family protein	[more]
AT4G38810.2	9.3e-08	30.51	Calcium-binding EF-hand family protein	[more]

BLAST of Carg07302 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg07302 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L9X6\|A0A0A0L9X6_CUCSA	1.1e-63	90.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1	[more]
tr\|A0A1S3CGR2\|A0A1S3CGR2_CUCME	5.5e-63	90.07	uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=...	[more]
tr\|B9REM6\|B9REM6_RICCO	5.3e-58	82.98	Calcium ion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_177594...	[more]
tr\|A0A067JCA8\|A0A067JCA8_JATCU	1.2e-57	83.57	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05261 PE=4 SV=1	[more]
tr\|A9PCU6\|A9PCU6_POPTR	8.5e-56	78.87	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G231100v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07302-RA	Carg07302-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 24..52 e-value: 0.032 score: 23.4 coord: 73..101 e-value: 0.083 score: 22.0
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 25..98 e-value: 8.9E-11 score: 42.0
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 20..55 score: 11.417
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 69..104 score: 10.692
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 25..99 e-value: 5.97762E-8 score: 44.8461
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 9..104 e-value: 3.5E-15 score: 57.9
None	No IPR available	PANTHER	PTHR44089:SF2	CALCIUM-BINDING EF-HAND-CONTAINING PROTEIN	coord: 1..140
None	No IPR available	PANTHER	PTHR44089	FAMILY NOT NAMED	coord: 1..140
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 33..45
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 82..94
IPR011992	EF-hand domain pair	SUPERFAMILY	SSF47473	EF-hand	coord: 19..99

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07302	Cla017233	Watermelon (97103) v1	carwmB0759
Carg07302	MELO3C023929	Melon (DHL92) v3.5.1	carmeB0755
Carg07302	ClCG10G012730	Watermelon (Charleston Gray)	carwcgB0738
Carg07302	CSPI03G30080	Wild cucumber (PI 183967)	carcpiB0797
Carg07302	Cucsa.177510	Cucumber (Gy14) v1	carcgyB0858
Carg07302	CmaCh14G010360	Cucurbita maxima (Rimu)	carcmaB1057
Carg07302	CmoCh14G010530	Cucurbita moschata (Rifu)	carcmoB1031
Carg07302	Cp4.1LG03g09050	Cucurbita pepo (Zucchini)	carcpeB1073
Carg07302	Cp4.1LG02g15480	Cucurbita pepo (Zucchini)	carcpeB1072
Carg07302	CsGy3G027890	Cucumber (Gy14) v2	carcgybB0756
Carg07302	MELO3C023929.2	Melon (DHL92) v3.6.1	carmedB0770
Carg07302	CsaV3_3G032560	Cucumber (Chinese Long) v3	carcucB0800
Carg07302	Cla97C10G195590	Watermelon (97103) v2	carwmbB0794
Carg07302	Bhi11G001225	Wax gourd	carwgoB0894

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07302	Carg11250	Silver-seed gourd	carcarB605

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07302	Cucurbita maxima (Rimu)	carcmaB1059
Carg07302	Cucurbita moschata (Rifu)	carcmoB1033
Carg07302	Cucumber (Chinese Long) v2	carcuB0779
Carg07302	Bottle gourd (USVL1VR-Ls)	carlsiB699