CSPI03G30080 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G30080
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionCalcium-binding EF hand family protein
LocationChr3 : 27531355 .. 27532546 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATAGTATTATATTATTAATTGAAAAGAAAAAAGAATGGGAGAAAAGAAGAGAATTGGAGCGGAATTTTCGTTTCATCACAAGTCGCACCCGGTCCCCGCTCTATAAATACAAAAACACAATATAATCGTATCCAACCCATTTCAAACGTTTCTCTCACCACCGAGTCACCACCACATATACACCGACTCTCACACTACAGACACATAATCAACCCCCACACACATATGGCGGTGGTCGTTCTCGACGGATCCACGGTCAGGAATTTCGTCAACGACGAATCTCACTTCAACAAGAGTATTGACGACGCCTTCGCTTCTCTTGATCTCAACAACGACGGCGTTCTCTCCCGATCCGAGCTCCGTAAGGCCTTCGAGACCCTCCGCCTCATCGAGACTCACTTCGGCGTCGACGTCGCTACTACCCCCGAACAACTCACCCAGCTCTACGATTCCATCTTCGAGCAGTTTGATTGTGATAAAAGCGGTACTGTCGATGCCGAAGAGTTTCGTACGGAGATGAAGAACATCTTGCTCGCTATCGCTGATGGATTAGGCTCCTCTCCCATTCAGATGGCGCTTGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCGGATCTGGAGGCTTCCAAGCTCCGCCAATCGTCTACCTGATTGCGATTGCTACGGTTTGCTATTTCCCTTACGTTTTTGCTCATTTTCTTCAGATATGAACATGTGTGAATCTGATTTCAGAATAAAATAGATCCTTATTCCCCGTTTGTGGTGGATGGAATGATCTATTTAGATTTTAACATGTAGAGATATAGAGGATTAGATGTACAAGGACTCTAATCAATATTGCTCTCCTCTTTACGTCTTTTTTACGATTTTCGGTTTTTTTATTTTTTTATTTATTTCTTTTTCCTTGATAAATATGTACTCCACTACTACATCCATGTTTGTGAGTGAGGAATTTTCTTAATTTTGTATGTGATTCGAGTGAGATTTGTGTCAACCTTTTTCTTTTTGTTTTGAACAACTATTTGGGTTCTTCCTTTTATTTCAATTTTCATAAGTGAGAGACGAGTATGAAATAAAGGGGATTTTAGGTAGAAGAATAATAATATAGCAAAGTCACAATGAAGATAGAAATTTTGAATTGTGTAGACCAAGACACTAAACTACTAAAACGTACGTTTTGACCGGGC

mRNA sequence

ATGGCGGTGGTCGTTCTCGACGGATCCACGGTCAGGAATTTCGTCAACGACGAATCTCACTTCAACAAGAGTATTGACGACGCCTTCGCTTCTCTTGATCTCAACAACGACGGCGTTCTCTCCCGATCCGAGCTCCGTAAGGCCTTCGAGACCCTCCGCCTCATCGAGACTCACTTCGGCGTCGACGTCGCTACTACCCCCGAACAACTCACCCAGCTCTACGATTCCATCTTCGAGCAGTTTGATTGTGATAAAAGCGGTACTGTCGATGCCGAAGAGTTTCGTACGGAGATGAAGAACATCTTGCTCGCTATCGCTGATGGATTAGGCTCCTCTCCCATTCAGATGGCGCTTGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCGGATCTGGAGGCTTCCAAGCTCCGCCAATCGTCTACCTGA

Coding sequence (CDS)

ATGGCGGTGGTCGTTCTCGACGGATCCACGGTCAGGAATTTCGTCAACGACGAATCTCACTTCAACAAGAGTATTGACGACGCCTTCGCTTCTCTTGATCTCAACAACGACGGCGTTCTCTCCCGATCCGAGCTCCGTAAGGCCTTCGAGACCCTCCGCCTCATCGAGACTCACTTCGGCGTCGACGTCGCTACTACCCCCGAACAACTCACCCAGCTCTACGATTCCATCTTCGAGCAGTTTGATTGTGATAAAAGCGGTACTGTCGATGCCGAAGAGTTTCGTACGGAGATGAAGAACATCTTGCTCGCTATCGCTGATGGATTAGGCTCCTCTCCCATTCAGATGGCGCTTGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCGGATCTGGAGGCTTCCAAGCTCCGCCAATCGTCTACCTGA
Homology
[Close]
BLAST of CSPI03G30080 vs. TrEMBL
Match: A0A0A0L9X6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G706670 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-71
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 

Query: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLRQSST 143
           GDQSFLKQAADLEASKLRQSST
Sbjct: 121 GDQSFLKQAADLEASKLRQSST 142

[Close]
BLAST of CSPI03G30080 vs. TrEMBL
Match: A0A067JCA8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05261 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 7.6e-59
Identity = 116/140 (82.86%), Postives = 128/140 (91.43%), Query Frame = 1 

Query: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           M VVV+DGSTVRNFV +E+HF KS++D FA LDLNNDGVLSRSELR+AFE+LRL+ETHFG
Sbjct: 1   MGVVVIDGSTVRNFVENEAHFKKSVEDTFAKLDLNNDGVLSRSELRRAFESLRLVETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV  TPEQLTQLYDSIFE FDCDKSGTVD EEFRTE++ ILLAIADGLGSSPIQMAL+D
Sbjct: 61  VDVTATPEQLTQLYDSIFESFDCDKSGTVDIEEFRTEVRKILLAIADGLGSSPIQMALED 120

Query: 121 GDQSFLKQAADLEASKLRQS 141
            DQSFLKQAADLEASKL+ S
Sbjct: 121 DDQSFLKQAADLEASKLQSS 140

[Close]
BLAST of CSPI03G30080 vs. TrEMBL
Match: A9PCU6_POPTR (Calcium-binding EF hand family protein OS=Populus trichocarpa GN=POPTR_0001s23820g PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.4e-57
Identity = 112/142 (78.87%), Postives = 130/142 (91.55%), Query Frame = 1 

Query: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           M VV++DGSTVR+FVNDE+ FNKS+D+AF  LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MGVVIIDGSTVRDFVNDEAQFNKSVDEAFTKLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVAT PE+LT LYDSIF++FDCD+SG+VD EE+R+E+K I+LAIADGLGSSPIQMAL+D
Sbjct: 61  VDVATAPEELTNLYDSIFDKFDCDQSGSVDLEEYRSELKKIMLAIADGLGSSPIQMALED 120

Query: 121 GDQSFLKQAADLEASKLRQSST 143
            DQ F+KQAADLEASKL Q S+
Sbjct: 121 DDQGFIKQAADLEASKLPQQSS 142

[Close]
BLAST of CSPI03G30080 vs. TrEMBL
Match: B9REM6_RICCO (Calcium ion binding protein, putative OS=Ricinus communis GN=RCOM_1775940 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.4e-57
Identity = 114/141 (80.85%), Postives = 130/141 (92.20%), Query Frame = 1 

Query: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           M VVV+DGSTVR+FVNDE+ F KS+D++FA LDLNNDGVLSRSELRKAFE+LRLIE+HFG
Sbjct: 1   MGVVVIDGSTVRDFVNDEAQFKKSVDESFAQLDLNNDGVLSRSELRKAFESLRLIESHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           +DV T PEQLTQLYDSIFE+FDCDKSGTVD +EFRTE+K ILLAIADGLGSSPIQMAL+D
Sbjct: 61  IDVVTPPEQLTQLYDSIFEKFDCDKSGTVDLDEFRTEIKKILLAIADGLGSSPIQMALED 120

Query: 121 GDQSFLKQAADLEASKLRQSS 142
            DQ FLK+AADLEASKL++ S
Sbjct: 121 DDQGFLKKAADLEASKLQKPS 141

[Close]
BLAST of CSPI03G30080 vs. TrEMBL
Match: A0A061EXW1_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_025032 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.1e-54
Identity = 110/142 (77.46%), Postives = 127/142 (89.44%), Query Frame = 1 

Query: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           M VV++DGSTVR FV DE  F KS+D++FA+LDLNNDGVLSRSELRKAFE+LRLIETHFG
Sbjct: 1   MGVVIIDGSTVRAFVTDEEQFKKSMDESFAALDLNNDGVLSRSELRKAFESLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVAT+PEQLTQLYDSIF++FDCD SG+VD  EFR+EMK ILLAIADGLGS PIQMAL+D
Sbjct: 61  VDVATSPEQLTQLYDSIFDKFDCDGSGSVDLPEFRSEMKKILLAIADGLGSCPIQMALED 120

Query: 121 GDQSFLKQAADLEASKLRQSST 143
            DQSFLK+AADLEA+KL   ++
Sbjct: 121 DDQSFLKKAADLEAAKLEAQAS 142

[Close]
BLAST of CSPI03G30080 vs. TAIR10
Match: AT2G44310.1 (AT2G44310.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 204.1 bits (518), Expect = 5.6e-53
Identity = 100/142 (70.42%), Postives = 123/142 (86.62%), Query Frame = 1 

Query: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           M VV++DGSTVR+FV+DE  F KS+D+ FA+LDLN DGVLSRSELRKAFE++RL+E+HFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T  ++LT LYDSIFE+FD D+SG+VD EEFR+EMK I+LAIADGLGS PI M LDD
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 GDQSFLKQAADLEASKLRQSST 143
            D +FLK+AADLEASKL ++S+
Sbjct: 121 DDDNFLKKAADLEASKLEKASS 142

[Close]
BLAST of CSPI03G30080 vs. TAIR10
Match: AT5G28830.1 (AT5G28830.1 calcium-binding EF hand family protein)

HSP 1 Score: 61.2 bits (147), Expect = 5.9e-10
Identity = 35/119 (29.41%), Postives = 58/119 (48.74%), Query Frame = 1 

Query: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           + V +LDG+ ++ F+ DE  F    ++ F  LD  + G L +SE+RKA         H G
Sbjct: 101 IVVSILDGTMLKMFLEDEDDFAMLAENLFTDLDEEDKGKLCKSEIRKAL-------VHMG 160

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALD 120
           V++   P     + D I ++ D D    +   +F   ++ +L  IAD L   PI + L+
Sbjct: 161 VEMGVPPLSEFPILDDIIKKHDADSDEELGQAQFAELLQQVLQEIADVLHEKPITIVLN 212

[Close]
BLAST of CSPI03G30080 vs. TAIR10
Match: AT4G38810.2 (AT4G38810.2 Calcium-binding EF-hand family protein)

HSP 1 Score: 58.2 bits (139), Expect = 5.0e-09
Identity = 37/118 (31.36%), Postives = 55/118 (46.61%), Query Frame = 1 

Query: 5   VLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVA 64
           VLDGS +   V +E  F+K ++  F  LD + DG LS +EL+ A      I    G+   
Sbjct: 14  VLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVAD---IGAALGLPAQ 73

Query: 65  TTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGD 123
            T      +Y  +  +F       V   EF+  + +ILL +A GL   PI +   DG+
Sbjct: 74  GTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGE 128

[Close]
BLAST of CSPI03G30080 vs. TAIR10
Match: AT1G54530.1 (AT1G54530.1 Calcium-binding EF hand family protein)

HSP 1 Score: 57.8 bits (138), Expect = 6.5e-09
Identity = 38/122 (31.15%), Postives = 65/122 (53.28%), Query Frame = 1 

Query: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           M   V+   T+  F++D   F    +D F  LDL+ +G+LS SELR+    +  +E+   
Sbjct: 1   MIETVITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESE-- 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMAL-D 120
                  ++   +Y++IFE+F  D    +  + FR  +  IL A+A G+G+SP+ M + +
Sbjct: 61  ---VAPGDETDNVYNAIFERFGED----LVPKNFRDLIAEILTAMARGIGNSPVIMVVHN 113

Query: 121 DG 122
           DG
Sbjct: 121 DG 113

[Close]
BLAST of CSPI03G30080 vs. NCBI nr
Match: gi|449471379|ref|XP_004153292.1| (PREDICTED: uncharacterized protein LOC101213961 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 3.3e-71
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 

Query: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLRQSST 143
           GDQSFLKQAADLEASKLRQSST
Sbjct: 121 GDQSFLKQAADLEASKLRQSST 142

[Close]
BLAST of CSPI03G30080 vs. NCBI nr
Match: gi|659123613|ref|XP_008461751.1| (PREDICTED: uncharacterized protein LOC103500282 [Cucumis melo])

HSP 1 Score: 269.2 bits (687), Expect = 4.0e-69
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 1 

Query: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVV+DGSTVRNFVNDE HFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLRQSST 143
           GD+SFLKQAADLEASKL QSST
Sbjct: 121 GDRSFLKQAADLEASKLGQSST 142

[Close]
BLAST of CSPI03G30080 vs. NCBI nr
Match: gi|802795788|ref|XP_012092595.1| (PREDICTED: uncharacterized protein LOC105650325 [Jatropha curcas])

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-58
Identity = 116/140 (82.86%), Postives = 128/140 (91.43%), Query Frame = 1 

Query: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           M VVV+DGSTVRNFV +E+HF KS++D FA LDLNNDGVLSRSELR+AFE+LRL+ETHFG
Sbjct: 1   MGVVVIDGSTVRNFVENEAHFKKSVEDTFAKLDLNNDGVLSRSELRRAFESLRLVETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV  TPEQLTQLYDSIFE FDCDKSGTVD EEFRTE++ ILLAIADGLGSSPIQMAL+D
Sbjct: 61  VDVTATPEQLTQLYDSIFESFDCDKSGTVDIEEFRTEVRKILLAIADGLGSSPIQMALED 120

Query: 121 GDQSFLKQAADLEASKLRQS 141
            DQSFLKQAADLEASKL+ S
Sbjct: 121 DDQSFLKQAADLEASKLQSS 140

[Close]
BLAST of CSPI03G30080 vs. NCBI nr
Match: gi|566150636|ref|XP_006369478.1| (calcium-binding EF hand family protein [Populus trichocarpa])

HSP 1 Score: 230.3 bits (586), Expect = 2.1e-57
Identity = 112/142 (78.87%), Postives = 130/142 (91.55%), Query Frame = 1 

Query: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           M VV++DGSTVR+FVNDE+ FNKS+D+AF  LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MGVVIIDGSTVRDFVNDEAQFNKSVDEAFTKLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVAT PE+LT LYDSIF++FDCD+SG+VD EE+R+E+K I+LAIADGLGSSPIQMAL+D
Sbjct: 61  VDVATAPEELTNLYDSIFDKFDCDQSGSVDLEEYRSELKKIMLAIADGLGSSPIQMALED 120

Query: 121 GDQSFLKQAADLEASKLRQSST 143
            DQ F+KQAADLEASKL Q S+
Sbjct: 121 DDQGFIKQAADLEASKLPQQSS 142

[Close]
BLAST of CSPI03G30080 vs. NCBI nr
Match: gi|255542263|ref|XP_002512195.1| (PREDICTED: uncharacterized protein LOC8289320 [Ricinus communis])

HSP 1 Score: 230.3 bits (586), Expect = 2.1e-57
Identity = 114/141 (80.85%), Postives = 130/141 (92.20%), Query Frame = 1 

Query: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           M VVV+DGSTVR+FVNDE+ F KS+D++FA LDLNNDGVLSRSELRKAFE+LRLIE+HFG
Sbjct: 1   MGVVVIDGSTVRDFVNDEAQFKKSVDESFAQLDLNNDGVLSRSELRKAFESLRLIESHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           +DV T PEQLTQLYDSIFE+FDCDKSGTVD +EFRTE+K ILLAIADGLGSSPIQMAL+D
Sbjct: 61  IDVVTPPEQLTQLYDSIFEKFDCDKSGTVDLDEFRTEIKKILLAIADGLGSSPIQMALED 120

Query: 121 GDQSFLKQAADLEASKLRQSS 142
            DQ FLK+AADLEASKL++ S
Sbjct: 121 DDQGFLKKAADLEASKLQKPS 141

The following BLAST results are available for this feature:
BLAST of CSPI03G30080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G30080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9X6_CUCSA2.3e-71100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G706670 PE=4 SV=1[more]
A0A067JCA8_JATCU7.6e-5982.86Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05261 PE=4 SV=1[more]
A9PCU6_POPTR1.4e-5778.87Calcium-binding EF hand family protein OS=Populus trichocarpa GN=POPTR_0001s2382... [more]
B9REM6_RICCO1.4e-5780.85Calcium ion binding protein, putative OS=Ricinus communis GN=RCOM_1775940 PE=4 S... [more]
A0A061EXW1_THECC1.1e-5477.46Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_025032 PE=4 SV=... [more]
BLAST of CSPI03G30080 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44310.15.6e-5370.42 Calcium-binding EF-hand family protein[more]
AT5G28830.15.9e-1029.41 calcium-binding EF hand family protein[more]
AT4G38810.25.0e-0931.36 Calcium-binding EF-hand family protein[more]
AT1G54530.16.5e-0931.15 Calcium-binding EF hand family protein[more]
BLAST of CSPI03G30080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449471379|ref|XP_004153292.1|3.3e-71100.00PREDICTED: uncharacterized protein LOC101213961 [Cucumis sativus][more]
gi|659123613|ref|XP_008461751.1|4.0e-6997.18PREDICTED: uncharacterized protein LOC103500282 [Cucumis melo][more]
gi|802795788|ref|XP_012092595.1|1.1e-5882.86PREDICTED: uncharacterized protein LOC105650325 [Jatropha curcas][more]
gi|566150636|ref|XP_006369478.1|2.1e-5778.87calcium-binding EF hand family protein [Populus trichocarpa][more]
gi|255542263|ref|XP_002512195.1|2.1e-5780.85PREDICTED: uncharacterized protein LOC8289320 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055074 calcium ion homeostasis
biological_process GO:0035725 sodium ion transmembrane transport
cellular_component GO:0005829 cytosol
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0005432 calcium:sodium antiporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G30080.1CSPI03G30080.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 24..98
score: 3.1
IPR002048EF-hand domainSMARTSM00054efh_1coord: 73..101
score: 0.011coord: 24..52
score: 0.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 69..104
score: 11.11coord: 20..55
score: 10
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 24..99
score: 3.1
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 25..99
score: 8.32
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 82..94
score: -coord: 33..45
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 1..133
score: 3.3
NoneNo IPR availablePANTHERPTHR10891:SF597SUBFAMILY NOT NAMEDcoord: 1..133
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G30080Cla017233Watermelon (97103) v1cpiwmB194
CSPI03G30080MELO3C023929Melon (DHL92) v3.5.1cpimeB199
CSPI03G30080ClCG10G012730Watermelon (Charleston Gray)cpiwcgB191
CSPI03G30080MELO3C023929.2Melon (DHL92) v3.6.1cpimedB193
CSPI03G30080CsaV3_3G032560Cucumber (Chinese Long) v3cpicucB144
CSPI03G30080Cla97C10G195590Watermelon (97103) v2cpiwmbB185
CSPI03G30080Bhi11G001225Wax gourdcpiwgoB221
CSPI03G30080Cucsa.177510Cucumber (Gy14) v1cgycpiB278
CSPI03G30080CmaCh01G002050Cucurbita maxima (Rimu)cmacpiB456
CSPI03G30080CmaCh14G010360Cucurbita maxima (Rimu)cmacpiB243
CSPI03G30080CmoCh14G010530Cucurbita moschata (Rifu)cmocpiB231
CSPI03G30080CmoCh01G002150Cucurbita moschata (Rifu)cmocpiB444
CSPI03G30080Cp4.1LG02g15480Cucurbita pepo (Zucchini)cpecpiB546
CSPI03G30080Cp4.1LG03g09050Cucurbita pepo (Zucchini)cpecpiB601
CSPI03G30080CsGy3G027890Cucumber (Gy14) v2cgybcpiB110
CSPI03G30080Carg11250Silver-seed gourdcarcpiB0850
CSPI03G30080Carg07302Silver-seed gourdcarcpiB0797
CSPI03G30080Carg04170Silver-seed gourdcarcpiB0227
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G30080Melon (DHL92) v3.6.1cpimedB174
CSPI03G30080Cucumber (Gy14) v2cgybcpiB313
CSPI03G30080Silver-seed gourdcarcpiB0390
CSPI03G30080Silver-seed gourdcarcpiB0488
CSPI03G30080Cucumber (Chinese Long) v3cpicucB191
CSPI03G30080Watermelon (97103) v2cpiwmbB268
CSPI03G30080Wild cucumber (PI 183967)cpicpiB142
CSPI03G30080Cucumber (Gy14) v1cgycpiB031
CSPI03G30080Cucurbita maxima (Rimu)cmacpiB365
CSPI03G30080Cucurbita maxima (Rimu)cmacpiB455
CSPI03G30080Cucurbita maxima (Rimu)cmacpiB904
CSPI03G30080Cucurbita moschata (Rifu)cmocpiB356
CSPI03G30080Cucurbita moschata (Rifu)cmocpiB443
CSPI03G30080Cucurbita moschata (Rifu)cmocpiB884
CSPI03G30080Cucumber (Chinese Long) v2cpicuB120
CSPI03G30080Watermelon (Charleston Gray)cpiwcgB188
CSPI03G30080Watermelon (97103) v1cpiwmB192
CSPI03G30080Cucurbita pepo (Zucchini)cpecpiB138
CSPI03G30080Cucurbita pepo (Zucchini)cpecpiB313
CSPI03G30080Bottle gourd (USVL1VR-Ls)cpilsiB171
CSPI03G30080Bottle gourd (USVL1VR-Ls)cpilsiB181