Carg07287 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07287
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box/lrr-repeat protein 17
Location	Cucurbita_argyrosperma_scaffold_017 : 1150265 .. 1152283 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGCTCTATATCTTAACTGCCCACAACTAGAGGATCTCAATCTGAACTCTTGCAAAAATTTGCATCCAGGTGAGTTTTTTTATTCTTCTCTTACCTCTTAACTGATGATCTCCTTGAAACTGACTATAATCCATATATCAGATGGCAAGTTTTTCTCCTAATAATATTGGATATATATGTCTGCTCGCAGAGAGATTGTTACTTCAGTGCCCCAGTTTACGAACTGTGCACGCATCAGATTGCAAGGAGTTAGTAGTTGGAGCTATTCGAATTCAGGTACACAAATTGATTACTTGACTTTAATCTCCTACTGAATTTGAGGATTGGTTACCTGGAAAGTGGCGACAATCCATGTACATGGTAGATGGCTCAACGAAGAATCAGCACTCTGATGTGATTATGCATCTCTTTTGTCAATTTCAGCTTGATAAGGCTGCTGCACCTGAGGAGAACCTACTATCATGCAAGCGCTTGGCAGATGGCTCAAAACGTATTCGAGTTCCACCTCTTATTAATTCACAGGCAAGTCAGAACTACTCGTTATATCCATATAGTGCTCTGAACATAAACATGGTTGTTAAGAACATATTGCCCAAGAGCGAGCTTAAACTTGTGAGCTTAATGGTAACTAACAAGTTTAGGAGTATTTTAACACGGAATCGGAATAAAAAAAAGTCCAATACTCAATTTCATGTAGTATAATTTCTTTCTCAATTGTTCAATTCACATATTTGGCTTCATGAATCCAATTAATATCCTAATCTACACAATGATGCATACACAAACTTCATGTAGTAGTAAATAACAGTGATCTTGTTCTTGTTGGCAGTCATCGGATAATTATACGAAACGAAGAAGGGTAGGAAGCCATCAGTGTAACATTCTTATGTCTTAAACAGTTCAGAAGTTCATAATGTTTTTCTTCTTGGCACACTGATAGTAATTGTGCGTTGTGTATTAGAGCCAATGAAGGCAGAGTGCAGCTGCCATCCATTTGGGGTTATAGGCAGAGCACCTCGCCAGTGTAAACATTTTTATTTGTAACACTTCCACACTTCCTAAAACTATATTTTTCAGTATGGAACTGAGTCCAGTACCCAGAGCCAAGCCATACATGGAAAGCTTATTAGGGTTTATAAGTTCTTTTTCTTTCCCCCCAATAAAGAACGATAGTTATTTATGATTAATTATTATTTGAGCACTACTTGATTGACTCCACTTGGTTGTAAGTTCATGTTCTGGAAGATGAGATTCGGAGTTCAGGGCAGGACTTGGAGGATTTATTATTCAAGGTCACCTACACTAGGTCGTGGTGGTGGCCCTCCAAATTCTTGGATGCTCGGTCAAACGGTATAAAACTATTAGCCACATTGGTTCGGTCTCAATTAAGAAGCTAGTTCCTTTGACTCGAGACAGCTCTCTTTTGCCTAAGTATTATAGGGAAAATCTCGACCTAATCTACAAGGCTAAATAGGTACGTCAAATCTCAGCTATGTTCAATTTTATGCTTCATTAAATTTGATTCTTGATTTTTTGATATCATCGTCTTCCTTCACTTGCTATCGATTGATGAAGGTGGGTTTGAAGAATTTCACTTCAATCAAAACTAACGCAAAATTGAAAAATATCACACGTGGAAAGACACCCAAAAGACAGGCACACGCAATACACATTAATCGATCACGAACACACAGTCACAATCCACATGTGGCAGAGAGACAAAGAAACACATCAAATTAAAAGTTTGATTAACACCCAAAGTTCGAACTTTTTTCTTTCCTTTTCTTTTTAAATACTTAAAAGCGTTTTTTTAACACAATTTTAAAGCTTAGCTAGCCATTGCATTATTAGCACAAAAAAAGACATTTTCAATAAATAACATAAACAGCAAACCCAAAACATGAATGGGTCATCCACATAAATGCCTTCTTCAACCATCCACATGACCTTGTTCCCTATGCTCAACCATCCATATGGAACATTTCCATTTAATTATTGGCCCTCTCCTCTATATA

mRNA sequence

ATGCAGGCTCTATATCTTAACTGCCCACAACTAGAGGATCTCAATCTGAACTCTTGCAAAAATTTGCATCCAGAGAGATTGTTACTTCAGTGCCCCAGTTTACGAACTGTGCACGCATCAGATTGCAAGGAGTTAGTAGTTGGAGCTATTCGAATTCAGCTTGATAAGGCTGCTGCACCTGAGGAGAACCTACTATCATGCAAGCGCTTGGCAGATGGCTCAAAACGTATTCGAGTTCCACCTCTTATTAATTCACAGGCAAGTCAGAACTACTCGTTATATCCATATAGTGCTCTGAACATAAACATGGTTGTTAAGAACATATTGCCCAAGAGCGAGCTTAAACTTGTGAGCTTAATGTCATCGGATAATTATACGAAACGAAGAAGGGTAGGAAGCCATCAGTGTAACATTCTTATGTCTTAAACAGTTCAGAAGTTCATAATGTTTTTCTTCTTGGCACACTGATAGTAATTGTGCGTTGTGTATTAGAGCCAATGAAGGCAGAGTGCAGCTGCCATCCATTTGGGGTTATAGGCAGAGCACCTCGCCAGTGTAAACATTTTTATTTGTAACACTTCCACACTTCCTAAAACTATATTTTTCAGTATGGAACTGAGTCCAGTACCCAGAGCCAAGCCATACATGGAAAGCTTATTAGGGTTTATAAGTTCTTTTTCTTTCCCCCCAATAAAGAACGATAGTTATTTATGATTAATTATTATTTGAGCACTACTTGATTGACTCCACTTGGTTGTAAGTTCATGTTCTGGAAGATGAGATTCGGAGTTCAGGGCAGGACTTGGAGGATTTATTATTCAAGGTCACCTACACTAGGTCGTGGTGGTGGCCCTCCAAATTCTTGGATGCTCGGTCAAACGGTATAAAACTATTAGCCACATTGGTTCGGTCTCAATTAAGAAGCTAGTTCCTTTGACTCGAGACAGCTCTCTTTTGCCTAAGTATTATAGGGAAAATCTCGACCTAATCTACAAGGCTAAATAGGTACGTCAAATCTCAGCTATGTTCAATTTTATGCTTCATTAAATTTGATTCTTGATTTTTTGATATCATCGTCTTCCTTCACTTGCTATCGATTGATGAAGGTGGGTTTGAAGAATTTCACTTCAATCAAAACTAACGCAAAATTGAAAAATATCACACGTGGAAAGACACCCAAAAGACAGGCACACGCAATACACATTAATCGATCACGAACACACAGTCACAATCCACATGTGGCAGAGAGACAAAGAAACACATCAAATTAAAAGTTTGATTAACACCCAAAGTTCGAACTTTTTTCTTTCCTTTTCTTTTTAAATACTTAAAAGCGTTTTTTTAACACAATTTTAAAGCTTAGCTAGCCATTGCATTATTAGCACAAAAAAAGACATTTTCAATAAATAACATAAACAGCAAACCCAAAACATGAATGGGTCATCCACATAAATGCCTTCTTCAACCATCCACATGACCTTGTTCCCTATGCTCAACCATCCATATGGAACATTTCCATTTAATTATTGGCCCTCTCCTCTATATA

Coding sequence (CDS)

ATGCAGGCTCTATATCTTAACTGCCCACAACTAGAGGATCTCAATCTGAACTCTTGCAAAAATTTGCATCCAGAGAGATTGTTACTTCAGTGCCCCAGTTTACGAACTGTGCACGCATCAGATTGCAAGGAGTTAGTAGTTGGAGCTATTCGAATTCAGCTTGATAAGGCTGCTGCACCTGAGGAGAACCTACTATCATGCAAGCGCTTGGCAGATGGCTCAAAACGTATTCGAGTTCCACCTCTTATTAATTCACAGGCAAGTCAGAACTACTCGTTATATCCATATAGTGCTCTGAACATAAACATGGTTGTTAAGAACATATTGCCCAAGAGCGAGCTTAAACTTGTGAGCTTAATGTCATCGGATAATTATACGAAACGAAGAAGGGTAGGAAGCCATCAGTGTAACATTCTTATGTCTTAA

Protein sequence

MQALYLNCPQLEDLNLNSCKNLHPERLLLQCPSLRTVHASDCKELVVGAIRIQLDKAAAPEENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLMSSDNYTKRRRVGSHQCNILMS

Homology

[Close]

BLAST of Carg07287 vs. NCBI nr
Match: XP_022954395.1 (F-box/LRR-repeat protein 17-like [Cucurbita moschata])

HSP 1 Score: 148.3 bits (373), Expect = 2.0e-32
Identity = 104/141 (73.76%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 60
           + ALYLNCPQLEDLNLNSCKNLHPE XXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP
Sbjct: 480 LDALYLNCPQLEDLNLNSCKNLHPEXXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 539

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPLINSQ                                  
Sbjct: 540 EENLLSCKRLADGSKRIRVPPLINSQ---------------------------------- 586

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRRRVGSHQCNILMS
Sbjct: 600 SSDNYTKRRRVGSHQCNILMS 586

[Close]

BLAST of Carg07287 vs. NCBI nr
Match: XP_023548623.1 (F-box/LRR-repeat protein 17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 148.3 bits (373), Expect = 2.0e-32
Identity = 104/141 (73.76%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 60
           + ALYLNCPQLEDLNLNSCKNLHPE XXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP
Sbjct: 484 LDALYLNCPQLEDLNLNSCKNLHPEXXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 543

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPLINSQ                                  
Sbjct: 544 EENLLSCKRLADGSKRIRVPPLINSQ---------------------------------- 590

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRRRVGSHQCNILMS
Sbjct: 604 SSDNYTKRRRVGSHQCNILMS 590

[Close]

BLAST of Carg07287 vs. NCBI nr
Match: XP_022991271.1 (F-box/LRR-repeat protein 17-like [Cucurbita maxima])

HSP 1 Score: 144.4 bits (363), Expect = 2.9e-31
Identity = 102/141 (72.34%), Postives = 104/141 (73.76%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 60
           + ALYLNCPQLEDLNLNSCKNLHPE XXXXXXXXXXXXXXXXXXXX GAIRIQLDKAAAP
Sbjct: 484 LDALYLNCPQLEDLNLNSCKNLHPEXXXXXXXXXXXXXXXXXXXXXXGAIRIQLDKAAAP 543

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPLINSQ                                  
Sbjct: 544 EENLLSCKRLADGSKRIRVPPLINSQ---------------------------------- 590

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSD+YTKRRRVGSHQCNILMS
Sbjct: 604 SSDDYTKRRRVGSHQCNILMS 590

[Close]

BLAST of Carg07287 vs. NCBI nr
Match: XP_004146955.2 (PREDICTED: F-box/LRR-repeat protein 17 [Cucumis sativus] >KGN44762.1 hypothetical protein Csa_7G378510 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 1.2e-29
Identity = 81/141 (57.45%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 60
           + ALYLNCPQL+DLNLNSCKNLHPER    XXXX            VGAIR QL+KAAAP
Sbjct: 481 LDALYLNCPQLDDLNLNSCKNLHPERLLLQXXXXRNVHASDCEELLVGAIRTQLNKAAAP 540

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPL+NS                                  +
Sbjct: 541 EENLLSCKRLADGSKRIRVPPLVNS----------------------------------L 587

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRR+VGSHQC IL+S
Sbjct: 601 SSDNYTKRRKVGSHQCKILVS 587

[Close]

BLAST of Carg07287 vs. NCBI nr
Match: XP_008451271.1 (PREDICTED: F-box/LRR-repeat protein 17 isoform X2 [Cucumis melo])

HSP 1 Score: 139.0 bits (349), Expect = 1.2e-29
Identity = 81/141 (57.45%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 60
           + ALYLNCPQL+DLNLNSCKNLHPER    XXXX            VGAIR QL+KAAAP
Sbjct: 485 LDALYLNCPQLDDLNLNSCKNLHPERLLLQXXXXRNVHASDCEELLVGAIRTQLNKAAAP 544

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPL+NS                                  +
Sbjct: 545 EENLLSCKRLADGSKRIRVPPLVNS----------------------------------L 591

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRR+VGSHQC IL+S
Sbjct: 605 SSDNYTKRRKVGSHQCKILVS 591

[Close]

BLAST of Carg07287 vs. TAIR10
Match: AT3G54650.1 (RNI-like superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 4.0e-11
Identity = 35/90 (38.89%), Postives = 47/90 (52.22%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 60
           + AL+LNCP+L DLNLN C NLHPE                      GAIR Q+ +  + 
Sbjct: 485 LDALFLNCPELMDLNLNLCSNLHPESLVLQCPKLQLVYASGCQGLLTGAIRKQVSENFSA 544

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQN 91
            EN +  KRLAD SKRI+  P +  +  ++
Sbjct: 545 GENHMPRKRLADASKRIQALPSLYQETRED 574

[Close]

BLAST of Carg07287 vs. Swiss-Prot
Match: sp|Q8W104|FBL17_ARATH (F-box/LRR-repeat protein 17 OS=Arabidopsis thaliana OX=3702 GN=FBL17 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.2e-10
Identity = 35/90 (38.89%), Postives = 47/90 (52.22%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 60
           + AL+LNCP+L DLNLN C NLHPE                      GAIR Q+ +  + 
Sbjct: 485 LDALFLNCPELMDLNLNLCSNLHPESLVLQCPKLQLVYASGCQGLLTGAIRKQVSENFSA 544

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQN 91
            EN +  KRLAD SKRI+  P +  +  ++
Sbjct: 545 GENHMPRKRLADASKRIQALPSLYQETRED 574

[Close]

BLAST of Carg07287 vs. TrEMBL
Match: tr|A0A1S4DYH7|A0A1S4DYH7_CUCME (F-box/LRR-repeat protein 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492620 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.0e-30
Identity = 81/141 (57.45%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 60
           + ALYLNCPQL+DLNLNSCKNLHPER    XXXX            VGAIR QL+KAAAP
Sbjct: 486 LDALYLNCPQLDDLNLNSCKNLHPERLLLQXXXXRNVHASDCEELLVGAIRTQLNKAAAP 545

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPL+NS                                  +
Sbjct: 546 EENLLSCKRLADGSKRIRVPPLVNS----------------------------------L 592

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRR+VGSHQC IL+S
Sbjct: 606 SSDNYTKRRKVGSHQCKILVS 592

[Close]

BLAST of Carg07287 vs. TrEMBL
Match: tr|A0A1S3BR56|A0A1S3BR56_CUCME (F-box/LRR-repeat protein 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492620 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.0e-30
Identity = 81/141 (57.45%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 60
           + ALYLNCPQL+DLNLNSCKNLHPER    XXXX            VGAIR QL+KAAAP
Sbjct: 485 LDALYLNCPQLDDLNLNSCKNLHPERLLLQXXXXRNVHASDCEELLVGAIRTQLNKAAAP 544

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPL+NS                                  +
Sbjct: 545 EENLLSCKRLADGSKRIRVPPLVNS----------------------------------L 591

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRR+VGSHQC IL+S
Sbjct: 605 SSDNYTKRRKVGSHQCKILVS 591

[Close]

BLAST of Carg07287 vs. TrEMBL
Match: tr|A0A0A0K8R2|A0A0A0K8R2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378510 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.0e-30
Identity = 81/141 (57.45%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 60
           + ALYLNCPQL+DLNLNSCKNLHPER    XXXX            VGAIR QL+KAAAP
Sbjct: 481 LDALYLNCPQLDDLNLNSCKNLHPERLLLQXXXXRNVHASDCEELLVGAIRTQLNKAAAP 540

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
           EENLLSCKRLADGSKRIRVPPL+NS                                  +
Sbjct: 541 EENLLSCKRLADGSKRIRVPPLVNS----------------------------------L 587

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           SSDNYTKRR+VGSHQC IL+S
Sbjct: 601 SSDNYTKRRKVGSHQCKILVS 587

[Close]

BLAST of Carg07287 vs. TrEMBL
Match: tr|A0A2P4HLI4|A0A2P4HLI4_QUESU (F-box/lrr-repeat protein 17 OS=Quercus suber OX=58331 GN=CFP56_02125 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.5e-16
Identity = 54/141 (38.30%), Postives = 67/141 (47.52%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 60
           + ALYLNCP+L DLNLNSCKNLHPER                    +GA+ IQ+      
Sbjct: 504 LDALYLNCPELNDLNLNSCKNLHPERLLLQCSKLESVHASGCQELLIGAVEIQVSNDFPA 563

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQASQNYSLYPYSALNINMVVKNILPKSELKLVSLM 120
            EN+L CKRLADGSKR+RVP  +++Q                                  
Sbjct: 564 VENVLPCKRLADGSKRVRVPHFLSAQ---------------------------------- 610

Query: 121 SSDNYTKRRRVGSHQCNILMS 142
           S D+  KRRRV    CN+L+S
Sbjct: 624 SCDDDKKRRRVERRHCNVLVS 610

[Close]

BLAST of Carg07287 vs. TrEMBL
Match: tr|A0A2N9I407|A0A2N9I407_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48669 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 9.4e-15
Identity = 63/87 (72.41%), Postives = 71/87 (81.61%), Query Frame = 0


Query: 1   MQALYLNCPQLEDLNLNSCKNLHPERXXXXXXXXXXXXXXXXXXXXVGAIRIQLDKAAAP 60
           + ALYLNCP+L DLNLNSCKNLHPERXXXXXXXXXXXXXXXXXX  VGAI  Q+      
Sbjct: 501 LDALYLNCPELNDLNLNSCKNLHPERXXXXXXXXXXXXXXXXXXLLVGAIESQVSNDFPA 560

Query: 61  EENLLSCKRLADGSKRIRVPPLINSQA 88
            EN+L CKRLADGSKR+RVP  I++Q+
Sbjct: 561 VENVLPCKRLADGSKRVRVPHFISAQS 587

The following BLAST results are available for this feature:

BLAST of Carg07287 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954395.1	2.0e-32	73.76	F-box/LRR-repeat protein 17-like [Cucurbita moschata]	[more]
XP_023548623.1	2.0e-32	73.76	F-box/LRR-repeat protein 17-like [Cucurbita pepo subsp. pepo]	[more]
XP_022991271.1	2.9e-31	72.34	F-box/LRR-repeat protein 17-like [Cucurbita maxima]	[more]
XP_004146955.2	1.2e-29	57.45	PREDICTED: F-box/LRR-repeat protein 17 [Cucumis sativus] >KGN44762.1 hypothetica...	[more]
XP_008451271.1	1.2e-29	57.45	PREDICTED: F-box/LRR-repeat protein 17 isoform X2 [Cucumis melo]	[more]

BLAST of Carg07287 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54650.1	4.0e-11	38.89	RNI-like superfamily protein	[more]

BLAST of Carg07287 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8W104\|FBL17_ARATH	7.2e-10	38.89	F-box/LRR-repeat protein 17 OS=Arabidopsis thaliana OX=3702 GN=FBL17 PE=1 SV=1	[more]

BLAST of Carg07287 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DYH7\|A0A1S4DYH7_CUCME	8.0e-30	57.45	F-box/LRR-repeat protein 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492620 P...	[more]
tr\|A0A1S3BR56\|A0A1S3BR56_CUCME	8.0e-30	57.45	F-box/LRR-repeat protein 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492620 P...	[more]
tr\|A0A0A0K8R2\|A0A0A0K8R2_CUCSA	8.0e-30	57.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378510 PE=4 SV=1	[more]
tr\|A0A2P4HLI4\|A0A2P4HLI4_QUESU	6.5e-16	38.30	F-box/lrr-repeat protein 17 OS=Quercus suber OX=58331 GN=CFP56_02125 PE=4 SV=1	[more]
tr\|A0A2N9I407\|A0A2N9I407_FAGSY	9.4e-15	72.41	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48669 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07287-RA	Carg07287-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 1..77 e-value: 1.2E-5 score: 26.4
None	No IPR available	PANTHER	PTHR44840	FAMILY NOT NAMED	coord: 2..90
None	No IPR available	SUPERFAMILY	SSF52047	RNI-like	coord: 6..51

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07287	Cla014810	Watermelon (97103) v1	carwmB0106
Carg07287	Csa7G378510	Cucumber (Chinese Long) v2	carcuB0120
Carg07287	MELO3C015764	Melon (DHL92) v3.5.1	carmeB0112
Carg07287	ClCG09G007540	Watermelon (Charleston Gray)	carwcgB0108
Carg07287	CSPI07G15840	Wild cucumber (PI 183967)	carcpiB0125
Carg07287	Cucsa.388740	Cucumber (Gy14) v1	carcgyB0136
Carg07287	CmaCh08G003060	Cucurbita maxima (Rimu)	carcmaB0148
Carg07287	CmaCh17G012170	Cucurbita maxima (Rimu)	carcmaB0142
Carg07287	CmoCh08G003040	Cucurbita moschata (Rifu)	carcmoB0157
Carg07287	CmoCh17G011950	Cucurbita moschata (Rifu)	carcmoB0152
Carg07287	Lsi02G022400	Bottle gourd (USVL1VR-Ls)	carlsiB098
Carg07287	Cp4.1LG12g11330	Cucurbita pepo (Zucchini)	carcpeB0158
Carg07287	Cp4.1LG17g06200	Cucurbita pepo (Zucchini)	carcpeB0161
Carg07287	CsGy7G014370	Cucumber (Gy14) v2	carcgybB0120
Carg07287	MELO3C015764.2	Melon (DHL92) v3.6.1	carmedB0114
Carg07287	CsaV3_7G027590	Cucumber (Chinese Long) v3	carcucB0129
Carg07287	Cla97C09G170170	Watermelon (97103) v2	carwmbB0117
Carg07287	Bhi09G000923	Wax gourd	carwgoB0131

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07287	Carg25775	Silver-seed gourd	carcarB137

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07287	Wax gourd	carwgoB0130
Carg07287	Watermelon (Charleston Gray)	carwcgB0113
Carg07287	Cucumber (Gy14) v2	carcgybB0119
Carg07287	Cucurbita maxima (Rimu)	carcmaB0147
Carg07287	Cucurbita moschata (Rifu)	carcmoB0156
Carg07287	Wild cucumber (PI 183967)	carcpiB0123
Carg07287	Cucumber (Chinese Long) v2	carcuB0118
Carg07287	Cucumber (Chinese Long) v3	carcucB0127
Carg07287	Bottle gourd (USVL1VR-Ls)	carlsiB100
Carg07287	Melon (DHL92) v3.6.1	carmedB0113
Carg07287	Watermelon (97103) v1	carwmB0109
Carg07287	Watermelon (97103) v2	carwmbB0116