Carg07098 (gene) Silver-seed gourd

Overview
NameCarg07098
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionnitrogen regulatory protein P-II homolog
LocationCucurbita_argyrosperma_scaffold_017 : 122034 .. 125382 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAATTCCCCAACGTGAACTACGAGGCTTCCGATCAGCTCCACACTCTGCTCCGTCTCTGATTCTGGCACACAACTTTCCATGGCGGCAACCGCGACGAACCCCACCGCTCTTCTCCTTCCTTTCCCTTCTCCTCTTCCAAAACTTCCTCACTTCGCTTCTTCTTCTTCCATCACTCCAAACTTCGCCGTCAGATTCTCTCAGTTCAACCTCGCCTACAAGCCTTCCAATCGCCGAATCCTTCCTCTAGTCAAGGCCCAAGCCTCTCTCGGTATCCATCACTCGCCTCGCATTTTATATATTGTGCTCACAAACGGATTTTGGATCCTCAGCTTCTTAATTTTTAATATGCGGTTTTCTTTTCTTTGTAGATTATGTGCCTGATTCCAAATTTTACAAAGTGGAGGCGATTCTCAGGTACGGATGGTCTCCATGGTGTTCTCTATTGCTACATTTGGAGTTTGTGAATGTAGATTTTGTCGTTTTCTTTAGTTTATAATTTGGATTTATCTTTTGAAGTCTTTGAGTAATCTTGCTGAGTTTGTTGCATCTGATACGTATTTATCTGTGTGCTATGTTGGTGTATATGGACGAGATAGGCCGTGGAGAATCCAAAATGTTTCATCGGTAAGATCTGGTTAACCTTGAACACGGTCATTCGTAATTTCCATTTGGAATATGCAAAATCTCGTTTGGTTTTTATTGTCGAATATGAAATAGTTGTGTAATGCACTGAACGGATGGTCGATATGGTAAAATTAGGGCACCTGAGACTACGGGGGAACAGAATTCTGTAAACTTTGAATTTTTTGGCATCATAGGAAGCGTAGTTTAGGATCATAATATTGAGGCTATCGAGGGAGGGAAAATCTACCGGTTGATATCATACTTGCATTTCTAATTGGTTGCATACTACCAATTGTGTAATGCAATGAACGGTTGGTGCTCGTCCAGAATGCTAACATTAGCGACTCATGTCATGTTAAGAACTTCTTAACCTTTAACCTATCTTACCTGACAAAGATGTATACATTATATGTGCTTTAATGATCGCCAAAGAATGGAGATTATGCAGATTTTTGTTGTTTAAATATCCTATTTTGCAAAGCATTTGCATTAAGTTGTTCTATTGTTTCTTTGGGAGAAAAAATAAAGGCATTGCTGAAAATGGGTATTCGAGGTGTCACGGTATCTGAAGTGAAGGGCTTTGGTTCTCAAGGTGGATCCACAGAGAGGCATGGTGGTAAGTTTTTCTTTCATGATTCTCTCTGTCTTGGTGCATGGTGAGGGGAATCTATTTGCACATGTGAGTCTGTTTCTAGATTCTCATGTCATTTCCCATTAGTCATTCCTGATGTTTGCTTATGATTCCAAATAACTTTATTCTCTTTCATTTACTGTTTAGGGTCTGAATTCTCTGAAGACAACTTTGTTGCTAAAGTTAAGATGGAAATTGTGGTCGTTAAAGAACAGGTAATATAATTTTTGCACATATATATTGTGCAAACTACTGCACTAGAATCCATGGGTATTATGATTAAATTTAAGTATCCTTTTATCAGGTTGAAGCTGTCATAGACAAGATAATTGAGGAGGCAAGAACTGGCGAAATTGGTGATGGCAAAATTTTTGGTAAAACATAACTTTATTTTTGTTAATGGCTCAGCTCCTTATCTGCTTATGTCTTAATTGTTTGCTTAATTTATATTCTTTGAATCTATTGTCCTGTTTGTTGAGCGGTTCATTTGTGTTGTCTTTTTATTTCACTTGTTTGATTTCTTTTTTCATGCATTACCATTGACACTAGTTTCTTATGTTAACTGGATTAGCACCTTATGTGTTAATTATTAGTAACAAACTAAAAAAATGTGTTTTATAAGTTTAGTGATAAGGAATCACTACAAAGGAAGAAAAGTAAGATTCGAATTACCTTGTTGATCGAATATCTCAAGGCAAGAACACTGGTTTGAGATTCGAATTACTCCACAAGCAAGATCGATCATGTCTAGCTTGAATGATTCTAAACATGCAATCTAAACTACTATAGAATTGCAAAGAAACTTAGCCGTTGACTAAATGAAAAGGTAAGAACACTTAGCCCTAATGAGGAATCACTCCAGGGAAAATAAATTTCAGATTACCTTATTGATCGAATATCTCAAGACAAGAACACTTCTTTGAGATTCGAAACACTCCACAAGTAAGATCGATCTTGTCTAACTTGAATGATTCTAAACATGCAATCTAAACCCTATAGAATTGTAAAAAAACTAAAAACTTAGTCCTTGGCCAAAAGAAAGCACAGATGCTTTTTTTACTACATTTTCCAAGTCTCTTTACAAAGATAACAACAAATGCTTTTTTTACTACATTTTCCAAGTCTCTTTACAAAGATAACAAACGTGACTTTATATAGCTTCAAAATGAAAACACTTAACCTTATGTAAATTTTATTCAAGTAAATAAAAGCCTTAAACACAGTAACTCTAGATTACCATCCACCCAAAATGGTAACTATCTCAAAATAAATTAAGCTTGATTAAATGCTATACTAGAGTTGATTTTAAGACGAAGCACATGGACTTTACTAGAGTTCATCATTTAAGTTATCATGCCCTATGCTTGCAATCTGGAGCACGTATCTAAATGCACACACATGGAAGAAAAACGAATCTCGGAATTAATTTTTCTTTATTTAATGAACCCTTTTAGACTCCTATCAAACTTCTGACACATTTTTCATCTTCACACAGTGATACCAATCTCAGACGTGATAAGAGTTCGTACAGGTAACTTGTTAGCTTTGGTCAACTATCAAAATTTCAAGTGGCCTCTATGAAACTTAAAAAACATTAAGATTATTTCATTTCACATTGGTATATGCTTGCCTTATATGATGCCTAATTCACAGGCGAACGTGGAGAAAGAGCGGAGAGGATGACTGGAGGGCGATCTGACATGGCTGTTGATCGAGTATGACAATAAGGAGAAAACCCTAGCAGATGAAGATGTTTTGAGTTTGAATCATGTTTCCATGATCTTGCCGATGCCTTCCTCAGTCCTGTGGAGAGGAGAAATAAAATAAATTGTAAGTTATAAGTTATAAGTCAGGTAAGTCGCTGCCTCTTGTAGTCATAAAAATGAACCATATTCGGCAATAATCAATGCCTAAGTTACTGCACCATTTCCTAATGTACCACTGATTTTATGTTAAACGCTACTACTCAATACTTTTGTAACTCAATAATTTTGTAACAGCCTTCACAATCCCCTCCCTTCGAGACTCAGTGTTTTTGCTGATACTCGTTTCTTTCCCCAATCTATGTGGGATCTCACAACTTTTGTTTT

mRNA sequence

AAAAAATTCCCCAACGTGAACTACGAGGCTTCCGATCAGCTCCACACTCTGCTCCGTCTCTGATTCTGGCACACAACTTTCCATGGCGGCAACCGCGACGAACCCCACCGCTCTTCTCCTTCCTTTCCCTTCTCCTCTTCCAAAACTTCCTCACTTCGCTTCTTCTTCTTCCATCACTCCAAACTTCGCCGTCAGATTCTCTCAGTTCAACCTCGCCTACAAGCCTTCCAATCGCCGAATCCTTCCTCTAGTCAAGGCCCAAGCCTCTCTCGATTATGTGCCTGATTCCAAATTTTACAAAGTGGAGGCGATTCTCAGGCCGTGGAGAATCCAAAATGTTTCATCGGCATTGCTGAAAATGGGTATTCGAGGTGTCACGGTATCTGAAGTGAAGGGCTTTGGTTCTCAAGGTGGATCCACAGAGAGGCATGGTGGGTCTGAATTCTCTGAAGACAACTTTGTTGCTAAAGTTAAGATGGAAATTGTGGTCGTTAAAGAACAGGTTGAAGCTGTCATAGACAAGATAATTGAGGAGGCAAGAACTGGCGAAATTGGTGATGGCAAAATTTTTGTGATACCAATCTCAGACGTGATAAGAGTTCGTACAGGCGAACGTGGAGAAAGAGCGGAGAGGATGACTGGAGGGCGATCTGACATGGCTGTTGATCGAGTATGACAATAAGGAGAAAACCCTAGCAGATGAAGATGTTTTGAGTTTGAATCATGTTTCCATGATCTTGCCGATGCCTTCCTCAGTCCTGTGGAGAGGAGAAATAAAATAAATTGTAAGTTATAAGTTATAAGTCAGGTAAGTCGCTGCCTCTTGTAGTCATAAAAATGAACCATATTCGGCAATAATCAATGCCTAAGTTACTGCACCATTTCCTAATGTACCACTGATTTTATGTTAAACGCTACTACTCAATACTTTTGTAACTCAATAATTTTGTAACAGCCTTCACAATCCCCTCCCTTCGAGACTCAGTGTTTTTGCTGATACTCGTTTCTTTCCCCAATCTATGTGGGATCTCACAACTTTTGTTTT

Coding sequence (CDS)

ATGGCGGCAACCGCGACGAACCCCACCGCTCTTCTCCTTCCTTTCCCTTCTCCTCTTCCAAAACTTCCTCACTTCGCTTCTTCTTCTTCCATCACTCCAAACTTCGCCGTCAGATTCTCTCAGTTCAACCTCGCCTACAAGCCTTCCAATCGCCGAATCCTTCCTCTAGTCAAGGCCCAAGCCTCTCTCGATTATGTGCCTGATTCCAAATTTTACAAAGTGGAGGCGATTCTCAGGCCGTGGAGAATCCAAAATGTTTCATCGGCATTGCTGAAAATGGGTATTCGAGGTGTCACGGTATCTGAAGTGAAGGGCTTTGGTTCTCAAGGTGGATCCACAGAGAGGCATGGTGGGTCTGAATTCTCTGAAGACAACTTTGTTGCTAAAGTTAAGATGGAAATTGTGGTCGTTAAAGAACAGGTTGAAGCTGTCATAGACAAGATAATTGAGGAGGCAAGAACTGGCGAAATTGGTGATGGCAAAATTTTTGTGATACCAATCTCAGACGTGATAAGAGTTCGTACAGGCGAACGTGGAGAAAGAGCGGAGAGGATGACTGGAGGGCGATCTGACATGGCTGTTGATCGAGTATGA

Protein sequence

MAATATNPTALLLPFPSPLPKLPHFASSSSITPNFAVRFSQFNLAYKPSNRRILPLVKAQASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSEFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGERAERMTGGRSDMAVDRV
Homology
[Close]
BLAST of Carg07098 vs. NCBI nr
Match: XP_022954086.1 (nitrogen regulatory protein P-II homolog [Cucurbita moschata])

HSP 1 Score: 375.6 bits (963), Expect = 1.1e-100
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0 

Query: 1   MAATATNPTALLLPFPSPLPKLPHFASSSSITPNFAVRFSQFNLAYKPSNRRILPLVKAQ 60
           MAATAT PTALLLPFPSPLPKLPHFASSSSITPNFAVRFSQFNLAYKPSNRRILPLVKAQ
Sbjct: 1   MAATATKPTALLLPFPSPLPKLPHFASSSSITPNFAVRFSQFNLAYKPSNRRILPLVKAQ 60

Query: 61  ASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSE 120
           ASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSE
Sbjct: 61  ASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSE 120

Query: 121 FSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGE 180
           FSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGE
Sbjct: 121 FSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGE 180

Query: 181 RAERMTGGRSDMAVDRV 198
           RAERMTGGRSDMAVDRV
Sbjct: 181 RAERMTGGRSDMAVDRV 197

[Close]
BLAST of Carg07098 vs. NCBI nr
Match: XP_023548897.1 (nitrogen regulatory protein P-II homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.2 bits (944), Expect = 1.7e-98
Identity = 195/197 (98.98%), Postives = 195/197 (98.98%), Query Frame = 0 

Query: 1   MAATATNPTALLLPFPSPLPKLPHFASSSSITPNFAVRFSQFNLAYKPSNRRILPLVKAQ 60
           MAATATNPTALLLPF SPLPKLPHFA SSSITPNFAVRFSQFNLAYKPSNRRILPLVKAQ
Sbjct: 1   MAATATNPTALLLPFHSPLPKLPHFA-SSSITPNFAVRFSQFNLAYKPSNRRILPLVKAQ 60

Query: 61  ASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSE 120
           ASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSE
Sbjct: 61  ASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSE 120

Query: 121 FSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGE 180
           FSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGE
Sbjct: 121 FSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGE 180

Query: 181 RAERMTGGRSDMAVDRV 198
           RAERMTGGRSDMAVDRV
Sbjct: 181 RAERMTGGRSDMAVDRV 196

[Close]
BLAST of Carg07098 vs. NCBI nr
Match: XP_022991627.1 (nitrogen regulatory protein P-II homolog [Cucurbita maxima])

HSP 1 Score: 362.5 bits (929), Expect = 9.3e-97
Identity = 191/197 (96.95%), Postives = 191/197 (96.95%), Query Frame = 0 

Query: 1   MAATATNPTALLLPFPSPLPKLPHFASSSSITPNFAVRFSQFNLAYKPSNRRILPLVKAQ 60
           MAAT T PTALLLPFPSPLPKLPHFA SSS TPNFAVRFSQFNL YKPSNRRILPLVKAQ
Sbjct: 1   MAATTTKPTALLLPFPSPLPKLPHFA-SSSFTPNFAVRFSQFNLVYKPSNRRILPLVKAQ 60

Query: 61  ASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSE 120
           ASLDYVPD KFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSE
Sbjct: 61  ASLDYVPDFKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSE 120

Query: 121 FSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGE 180
           FSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGE
Sbjct: 121 FSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGE 180

Query: 181 RAERMTGGRSDMAVDRV 198
           RAERMTGGRSDMAVDRV
Sbjct: 181 RAERMTGGRSDMAVDRV 196

[Close]
BLAST of Carg07098 vs. NCBI nr
Match: XP_011659409.1 (PREDICTED: nitrogen regulatory protein P-II homolog [Cucumis sativus] >KGN45044.1 hypothetical protein Csa_7G414410 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 9.1e-76
Identity = 164/196 (83.67%), Postives = 171/196 (87.24%), Query Frame = 0 

Query: 1   MAATATNPTALLLPFPSPLPKLPHFASSSSITPNF-AVRFSQFNLAYK-PSNRRILPLVK 60
           +AAT TN TALLL    P P+  HF S S ITP F  V  S FNLA   PSNR+ILPLVK
Sbjct: 3   VAATTTNLTALLL----PRPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVK 62

Query: 61  A-QASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHG 120
           A Q SLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVS+VKGFGSQGGS ERHG
Sbjct: 63  ATQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHG 122

Query: 121 GSEFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGE 180
           GSEFSEDNFV KVKMEIVVVK+QVEAVIDKIIEEARTGEIGDGKIFVIPISDVIR+RTGE
Sbjct: 123 GSEFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGE 182

Query: 181 RGERAERMTGGRSDMA 194
           RGERAERMTGGRSDM+
Sbjct: 183 RGERAERMTGGRSDMS 194

[Close]
BLAST of Carg07098 vs. NCBI nr
Match: XP_008461402.1 (PREDICTED: nitrogen regulatory protein P-II homolog [Cucumis melo])

HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75
Identity = 164/196 (83.67%), Postives = 171/196 (87.24%), Query Frame = 0 

Query: 1   MAATATNPTALLLPFPSPLPKLPHFASSSSITPNFA-VRFSQFNLAYK-PSNRRILPLVK 60
           +AAT TN T LLLP   P P+   F S S ITP F  V  S FNLA   PSNR+ILPLVK
Sbjct: 3   VAATTTNLTVLLLP---PRPQFHPFTSFSFITPYFTPVGLSHFNLANNHPSNRQILPLVK 62

Query: 61  A-QASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHG 120
           A Q SLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVS+VKGFGSQGGS ERHG
Sbjct: 63  ATQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHG 122

Query: 121 GSEFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGE 180
           GSEFSEDNFVAKVKMEIVVVK+QVEAVIDKIIEEARTGEIGDGKIFVIPISDVIR+RTGE
Sbjct: 123 GSEFSEDNFVAKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGE 182

Query: 181 RGERAERMTGGRSDMA 194
           RGERAERMTGGRSDM+
Sbjct: 183 RGERAERMTGGRSDMS 195

[Close]
BLAST of Carg07098 vs. TAIR10
Match: AT4G01900.1 (GLNB1 homolog)

HSP 1 Score: 228.0 bits (580), Expect = 5.0e-60
Identity = 132/191 (69.11%), Postives = 153/191 (80.10%), Query Frame = 0 

Query: 1   MAATATNPTALL-LPFPSPLPKLPHFASSSSITPNFA-VRFSQFNLAYK-PSNR-RILPL 60
           MAA+ T P ++  L F S    +  F+   SI   F   R S  +L  K PSN  R+LP+
Sbjct: 1   MAASMTKPISITSLGFYSDRKNIA-FSDCISICSGFRHSRPSCLDLVTKSPSNNSRVLPV 60

Query: 61  VKAQASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERH 120
           V AQ S DY+PDSKFYKVEAI+RPWRIQ VSSALLK+GIRGVTVS+V+GFG+QGGSTERH
Sbjct: 61  VSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIRGVTVSDVRGFGAQGGSTERH 120

Query: 121 GGSEFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTG 180
           GGSEFSED FVAKVKMEIVV K+QVE+VI+ IIE ARTGEIGDGKIFV+P+SDVIRVRTG
Sbjct: 121 GGSEFSEDKFVAKVKMEIVVKKDQVESVINTIIEGARTGEIGDGKIFVLPVSDVIRVRTG 180

Query: 181 ERGERAERMTG 188
           ERGE+AE+MTG
Sbjct: 181 ERGEKAEKMTG 190

[Close]
BLAST of Carg07098 vs. Swiss-Prot
Match: sp|Q9ZST4|GLNB_ARATH (Nitrogen regulatory protein P-II homolog OS=Arabidopsis thaliana OX=3702 GN=GLB1 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 9.0e-59
Identity = 132/191 (69.11%), Postives = 153/191 (80.10%), Query Frame = 0 

Query: 1   MAATATNPTALL-LPFPSPLPKLPHFASSSSITPNFA-VRFSQFNLAYK-PSNR-RILPL 60
           MAA+ T P ++  L F S    +  F+   SI   F   R S  +L  K PSN  R+LP+
Sbjct: 1   MAASMTKPISITSLGFYSDRKNIA-FSDCISICSGFRHSRPSCLDLVTKSPSNNSRVLPV 60

Query: 61  VKAQASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERH 120
           V AQ S DY+PDSKFYKVEAI+RPWRIQ VSSALLK+GIRGVTVS+V+GFG+QGGSTERH
Sbjct: 61  VSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIRGVTVSDVRGFGAQGGSTERH 120

Query: 121 GGSEFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTG 180
           GGSEFSED FVAKVKMEIVV K+QVE+VI+ IIE ARTGEIGDGKIFV+P+SDVIRVRTG
Sbjct: 121 GGSEFSEDKFVAKVKMEIVVKKDQVESVINTIIEGARTGEIGDGKIFVLPVSDVIRVRTG 180

Query: 181 ERGERAERMTG 188
           ERGE+AE+MTG
Sbjct: 181 ERGEKAEKMTG 190

[Close]
BLAST of Carg07098 vs. Swiss-Prot
Match: sp|Q6AUR2|GLNB_ORYSJ (Nitrogen regulatory protein P-II homolog OS=Oryza sativa subsp. japonica OX=39947 GN=GLB PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.3e-52
Identity = 105/144 (72.92%), Postives = 125/144 (86.81%), Query Frame = 0 

Query: 51  RRILPL---VKAQASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFG 110
           RR+ P     ++ A+  Y P+S+FYKVEAILRPWR+  VSS LL+MGIRGVTVS+V+GFG
Sbjct: 60  RRLPPTAARAQSAAAAGYQPESEFYKVEAILRPWRVPYVSSGLLQMGIRGVTVSDVRGFG 119

Query: 111 SQGGSTERHGGSEFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPI 170
           +QGGSTERH GSEF+ED F+ KVKMEIVV K+QVEAV+DKIIE+ARTGEIGDGKIF+IP+
Sbjct: 120 AQGGSTERHEGSEFAEDTFIDKVKMEIVVSKDQVEAVVDKIIEKARTGEIGDGKIFLIPV 179

Query: 171 SDVIRVRTGERGERAERMTGGRSD 192
           SDVIR+RTGERGERAERM GG +D
Sbjct: 180 SDVIRIRTGERGERAERMAGGLAD 203

[Close]
BLAST of Carg07098 vs. Swiss-Prot
Match: sp|O66513|GLNB_AQUAE (Nitrogen regulatory protein P-II OS=Aquifex aeolicus (strain VF5) OX=224324 GN=glnB PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.2e-28
Identity = 61/110 (55.45%), Postives = 88/110 (80.00%), Query Frame = 0 

Query: 73  KVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSEFSEDNFVAKVKM 132
           K+EAI++P+++  V  AL+++GI G+TV+EVKGFG Q G TE + G+E+  D F+ KVK+
Sbjct: 3   KIEAIIKPFKLDEVKDALVEIGIGGMTVTEVKGFGQQKGHTEIYRGTEYVID-FLPKVKI 62

Query: 133 EIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGERA 183
           E+VV  E VE V++ I++ A+TG +GDGKIF+IP+ DVIR+RTGERGE+A
Sbjct: 63  EVVVRDEDVEKVVETIVKTAQTGRVGDGKIFIIPVEDVIRIRTGERGEQA 111

[Close]
BLAST of Carg07098 vs. Swiss-Prot
Match: sp|Q47894|GLNB_MICDP (Nitrogen regulatory protein P-II OS=Microchaete diplosiphon OX=1197 GN=glnB PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-27
Identity = 63/110 (57.27%), Postives = 84/110 (76.36%), Query Frame = 0 

Query: 73  KVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSEFSEDNFVAKVKM 132
           KVEAI+RP+++  V  AL+  GI G+TVSEV+GFG Q G TER+ GSE++ + F+ K+K+
Sbjct: 3   KVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKV 62

Query: 133 EIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGERA 183
           EIVV   QV+ V+DKII  ARTGEIGDGKIF+ P+  V+R+RTGE+   A
Sbjct: 63  EIVVEDNQVDMVVDKIIAAARTGEIGDGKIFISPVEQVVRIRTGEKNTEA 111

[Close]
BLAST of Carg07098 vs. Swiss-Prot
Match: sp|O30794|GLNB_NOSP7 (Nitrogen regulatory protein P-II OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=glnB PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-27
Identity = 64/110 (58.18%), Postives = 84/110 (76.36%), Query Frame = 0 

Query: 73  KVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSEFSEDNFVAKVKM 132
           KVEAI+RP+++  V  AL+  GI G+TVSEV+GFG Q G TER+ GSE++ + F+ K+K+
Sbjct: 3   KVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKV 62

Query: 133 EIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGERA 183
           EIVV   QV+ V+DKII  ARTGEIGDGKIF+ P+  VIR+RTGE+   A
Sbjct: 63  EIVVDDNQVDMVVDKIIAAARTGEIGDGKIFISPVEQVIRIRTGEKNTEA 111

[Close]
BLAST of Carg07098 vs. TrEMBL
Match: tr|A0A0A0K850|A0A0A0K850_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414410 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 6.0e-76
Identity = 164/196 (83.67%), Postives = 171/196 (87.24%), Query Frame = 0 

Query: 1   MAATATNPTALLLPFPSPLPKLPHFASSSSITPNF-AVRFSQFNLAYK-PSNRRILPLVK 60
           +AAT TN TALLL    P P+  HF S S ITP F  V  S FNLA   PSNR+ILPLVK
Sbjct: 3   VAATTTNLTALLL----PRPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVK 62

Query: 61  A-QASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHG 120
           A Q SLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVS+VKGFGSQGGS ERHG
Sbjct: 63  ATQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHG 122

Query: 121 GSEFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGE 180
           GSEFSEDNFV KVKMEIVVVK+QVEAVIDKIIEEARTGEIGDGKIFVIPISDVIR+RTGE
Sbjct: 123 GSEFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGE 182

Query: 181 RGERAERMTGGRSDMA 194
           RGERAERMTGGRSDM+
Sbjct: 183 RGERAERMTGGRSDMS 194

[Close]
BLAST of Carg07098 vs. TrEMBL
Match: tr|A0A1S3CEB3|A0A1S3CEB3_CUCME (nitrogen regulatory protein P-II homolog OS=Cucumis melo OX=3656 GN=LOC103500000 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.3e-75
Identity = 164/196 (83.67%), Postives = 171/196 (87.24%), Query Frame = 0 

Query: 1   MAATATNPTALLLPFPSPLPKLPHFASSSSITPNFA-VRFSQFNLAYK-PSNRRILPLVK 60
           +AAT TN T LLLP   P P+   F S S ITP F  V  S FNLA   PSNR+ILPLVK
Sbjct: 3   VAATTTNLTVLLLP---PRPQFHPFTSFSFITPYFTPVGLSHFNLANNHPSNRQILPLVK 62

Query: 61  A-QASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHG 120
           A Q SLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVS+VKGFGSQGGS ERHG
Sbjct: 63  ATQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHG 122

Query: 121 GSEFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGE 180
           GSEFSEDNFVAKVKMEIVVVK+QVEAVIDKIIEEARTGEIGDGKIFVIPISDVIR+RTGE
Sbjct: 123 GSEFSEDNFVAKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGE 182

Query: 181 RGERAERMTGGRSDMA 194
           RGERAERMTGGRSDM+
Sbjct: 183 RGERAERMTGGRSDMS 195

[Close]
BLAST of Carg07098 vs. TrEMBL
Match: tr|A0A061DRE1|A0A061DRE1_THECC (Nitrogen regulatory protein P-II OS=Theobroma cacao OX=3641 GN=TCM_004888 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 5.3e-64
Identity = 134/184 (72.83%), Postives = 156/184 (84.78%), Query Frame = 0 

Query: 12  LLPFPSPLPKLPHFASSSSITPNFA-VRFSQFNLAYK-PSNRRILPLVKAQASLDYVPDS 71
           L P  SP  +  +    SS+ P+F   R S+ N+  K P N  ILP+++AQ+S DY PDS
Sbjct: 10  LSPLHSPSHRNYYPLIYSSVLPSFRDSRLSKLNVTLKHPRNASILPVIRAQSSPDYTPDS 69

Query: 72  KFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSEFSEDNFVAK 131
           KFYKVEAI+RPWRIQ VSSALLKMGIRGVTVS+V+GFG+QGGSTERHGGSEFSED FV+K
Sbjct: 70  KFYKVEAIIRPWRIQQVSSALLKMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVSK 129

Query: 132 VKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGERAERMTGGR 191
           VKMEIVV K+QVEAVIDKIIEEARTGEIGDGKIF++P+SDVIRVRTGERGE+AERMTGGR
Sbjct: 130 VKMEIVVSKDQVEAVIDKIIEEARTGEIGDGKIFLVPVSDVIRVRTGERGEKAERMTGGR 189

Query: 192 SDMA 194
           +DM+
Sbjct: 190 ADMS 193

[Close]
BLAST of Carg07098 vs. TrEMBL
Match: tr|M5XMG7|M5XMG7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G005300 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 9.0e-64
Identity = 137/194 (70.62%), Postives = 160/194 (82.47%), Query Frame = 0 

Query: 1   MAATATNPTALLLPFPSPLPKLPHFASSSSITPNFAVRFSQFNLAYKPS-NRRILPLVKA 60
           MAA A    +LL P  S L +LP   SSS  T     RFS FN+  K + N  +LP+++A
Sbjct: 1   MAAMA--KPSLLNPLRSHLNELPLIDSSSIRTKLREFRFSHFNVTLKHARNASVLPVIRA 60

Query: 61  QASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGS 120
           Q+S DYVPDSKFYKVEAILRPWR+  VSSALLK+GIRGVTVS+V+GFG+QGGSTERHGGS
Sbjct: 61  QSSPDYVPDSKFYKVEAILRPWRVSQVSSALLKIGIRGVTVSDVRGFGAQGGSTERHGGS 120

Query: 121 EFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERG 180
           EF+EDNFVAKVKMEIVV K+QVEAV+DKIIE A+TGEIGDGKIFV+P+SDVIR+RTGERG
Sbjct: 121 EFTEDNFVAKVKMEIVVSKDQVEAVVDKIIEAAKTGEIGDGKIFVVPVSDVIRIRTGERG 180

Query: 181 ERAERMTGGRSDMA 194
           ERAE+MTGG SD +
Sbjct: 181 ERAEKMTGGWSDQS 192

[Close]
BLAST of Carg07098 vs. TrEMBL
Match: tr|A0A1Q3B7X9|A0A1Q3B7X9_CEPFO (P-II domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07588 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.1e-61
Identity = 129/167 (77.25%), Postives = 146/167 (87.43%), Query Frame = 0 

Query: 28  SSSITPNFAVRFSQFNLAYKPS-NRRILPLVKAQASLDYVPDSKFYKVEAILRPWRIQNV 87
           ++SI P     +SQF+L Y  + N  ILP++KAQ S DYVPD++FYKVEAILRPWRI+ V
Sbjct: 25  TTSIRPKLI--YSQFSLLYLTTRNTAILPVIKAQTSQDYVPDAEFYKVEAILRPWRIEKV 84

Query: 88  SSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSEFSEDNFVAKVKMEIVVVKEQVEAVID 147
           SSALLKMGIRGVTVS+V+GFG+QGGSTER GGSEFSED FVAKVKMEIVV K QVEAVID
Sbjct: 85  SSALLKMGIRGVTVSDVRGFGAQGGSTERQGGSEFSEDKFVAKVKMEIVVTKSQVEAVID 144

Query: 148 KIIEEARTGEIGDGKIFVIPISDVIRVRTGERGERAERMTGGRSDMA 194
           KII EA+TGEIGDGKIF++PISDVIRVRTGERGE AERMTGGRSDM+
Sbjct: 145 KIIGEAKTGEIGDGKIFLVPISDVIRVRTGERGEMAERMTGGRSDMS 189

The following BLAST results are available for this feature:
BLAST of Carg07098 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022954086.11.1e-10099.49nitrogen regulatory protein P-II homolog [Cucurbita moschata][more]
XP_023548897.11.7e-9898.98nitrogen regulatory protein P-II homolog [Cucurbita pepo subsp. pepo][more]
XP_022991627.19.3e-9796.95nitrogen regulatory protein P-II homolog [Cucurbita maxima][more]
XP_011659409.19.1e-7683.67PREDICTED: nitrogen regulatory protein P-II homolog [Cucumis sativus] >KGN45044.... [more]
XP_008461402.12.0e-7583.67PREDICTED: nitrogen regulatory protein P-II homolog [Cucumis melo][more]
BLAST of Carg07098 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G01900.15.0e-6069.11GLNB1 homolog[more]
BLAST of Carg07098 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZST4|GLNB_ARATH9.0e-5969.11Nitrogen regulatory protein P-II homolog OS=Arabidopsis thaliana OX=3702 GN=GLB1... [more]
sp|Q6AUR2|GLNB_ORYSJ1.3e-5272.92Nitrogen regulatory protein P-II homolog OS=Oryza sativa subsp. japonica OX=3994... [more]
sp|O66513|GLNB_AQUAE8.2e-2855.45Nitrogen regulatory protein P-II OS=Aquifex aeolicus (strain VF5) OX=224324 GN=g... [more]
sp|Q47894|GLNB_MICDP3.1e-2757.27Nitrogen regulatory protein P-II OS=Microchaete diplosiphon OX=1197 GN=glnB PE=3... [more]
sp|O30794|GLNB_NOSP73.1e-2758.18Nitrogen regulatory protein P-II OS=Nostoc punctiforme (strain ATCC 29133 / PCC ... [more]
BLAST of Carg07098 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K850|A0A0A0K850_CUCSA6.0e-7683.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414410 PE=3 SV=1[more]
tr|A0A1S3CEB3|A0A1S3CEB3_CUCME1.3e-7583.67nitrogen regulatory protein P-II homolog OS=Cucumis melo OX=3656 GN=LOC103500000... [more]
tr|A0A061DRE1|A0A061DRE1_THECC5.3e-6472.83Nitrogen regulatory protein P-II OS=Theobroma cacao OX=3641 GN=TCM_004888 PE=3 S... [more]
tr|M5XMG7|M5XMG7_PRUPE9.0e-6470.62Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G005300 PE=3 SV=1[more]
tr|A0A1Q3B7X9|A0A1Q3B7X9_CEPFO1.1e-6177.25P-II domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_075... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030234enzyme regulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006808regulation of nitrogen utilization
Vocabulary: INTERPRO
TermDefinition
IPR011322N-reg_PII-like_a/b
IPR017918N-reg_PII_CS
IPR015867N-reg_PII/ATP_PRibTrfase_C
IPR002187N-reg_PII
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006808 regulation of nitrogen utilization
cellular_component GO:0005575 cellular_component
molecular_function GO:0030234 enzyme regulator activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07098-RACarg07098-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 197..197
NoneNo IPR availablePANTHERPTHR30115:SF11NITROGEN REGULATORY PROTEIN P-II HOMOLOGcoord: 73..192
IPR002187Nitrogen regulatory protein PIIPRINTSPR00340PIIGLNBcoord: 123..146
score: 35.05
coord: 93..111
score: 53.25
coord: 154..174
score: 62.0
coord: 72..87
score: 34.19
IPR002187Nitrogen regulatory protein PIISMARTSM00938P_II_3coord: 74..176
e-value: 6.4E-45
score: 165.2
IPR002187Nitrogen regulatory protein PIIPFAMPF00543P-IIcoord: 74..176
e-value: 1.3E-34
score: 118.8
IPR002187Nitrogen regulatory protein PIIPANTHERPTHR30115NITROGEN REGULATORY PROTEIN P-IIcoord: 73..192
IPR002187Nitrogen regulatory protein PIIPROSITEPS51343PII_GLNB_DOMcoord: 71..183
score: 36.799
IPR015867Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminalGENE3DG3DSA:3.30.70.120coord: 59..192
e-value: 5.2E-54
score: 183.9
IPR017918Nitrogen regulatory protein PII, conserved sitePROSITEPS00638PII_GLNB_CTERcoord: 154..167
IPR011322Nitrogen regulatory PII-like, alpha/betaSUPERFAMILYSSF54913GlnB-likecoord: 73..182

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg07098Cla015168Watermelon (97103) v1carwmB0106
Carg07098Csa7G414410Cucumber (Chinese Long) v2carcuB0119
Carg07098MELO3C023629Melon (DHL92) v3.5.1carmeB0114
Carg07098ClCG09G004810Watermelon (Charleston Gray)carwcgB0108
Carg07098CSPI07G18430Wild cucumber (PI 183967)carcpiB0124
Carg07098Cucsa.128590Cucumber (Gy14) v1carcgyB0131
Carg07098CmaCh17G010110Cucurbita maxima (Rimu)carcmaB0142
Carg07098CmoCh17G009880Cucurbita moschata (Rifu)carcmoB0152
Carg07098Lsi02G025030Bottle gourd (USVL1VR-Ls)carlsiB098
Carg07098Cp4.1LG12g06280Cucurbita pepo (Zucchini)carcpeB0158
Carg07098CsGy7G016840Cucumber (Gy14) v2carcgybB0120
Carg07098MELO3C023629.2Melon (DHL92) v3.6.1carmedB0116
Carg07098CsaV3_7G030270Cucumber (Chinese Long) v3carcucB0128
Carg07098Cla97C09G167230Watermelon (97103) v2carwmbB0117
Carg07098Bhi09G000643Wax gourdcarwgoB0132
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg07098Silver-seed gourdcarcarB129
Carg07098Silver-seed gourdcarcarB132
Carg07098Silver-seed gourdcarcarB133
Carg07098Cucurbita maxima (Rimu)carcmaB0141
Carg07098Cucurbita maxima (Rimu)carcmaB0143
Carg07098Cucurbita maxima (Rimu)carcmaB0148
Carg07098Cucurbita moschata (Rifu)carcmoB0151
Carg07098Cucurbita moschata (Rifu)carcmoB0153
Carg07098Cucurbita moschata (Rifu)carcmoB0157
Carg07098Cucurbita pepo (Zucchini)carcpeB0161
Carg07098Cucurbita pepo (Zucchini)carcpeB0164
Carg07098Bottle gourd (USVL1VR-Ls)carlsiB099
Carg07098Melon (DHL92) v3.6.1carmedB0117
Carg07098Watermelon (Charleston Gray)carwcgB0110
Carg07098Watermelon (97103) v1carwmB0108
Carg07098Watermelon (97103) v2carwmbB0111
Carg07098Wax gourdcarwgoB0126