Carg06652 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06652
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	LysM and putative peptidoglycan-binding domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_012 : 208226 .. 211473 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTGATCTTTAAATTTTCTTCATCGGAGCAAACGGCGCCTTTTGAGTGGTAGGTGTTGGTAGGTGAAGATTTCTTCCGATCGTAAGATCAGATCCTTCCTCCCAAATTCGATTGAAGACGAATTCGAAGAAGAAGTTCGTGTAGATGTCCCCGTCAAATAGTTCGTCAAGTGGAGTTAGTGGACATGGTGGACCGAATTACATAGAACATCAAATTTCCAAAATGGATACTCTCGCCGGCATCGCCATTAAGTATGGAGTCGAGGTACCTTTCATTTTCCTTTTCCTTCTTCAATTTTTGCCTATTCTTCTGTCGGTTTAGCTTTATGTTCTCCTTTGTTGTGTTTTTTCCTCAAGTTTTGGCGATTCTTTCTCTTGTCATACCGTATCAATTAACGGTTGACTTGATTCGATTTTCGAGGTCTGGTAAATCATTGCTCTAAGTTCCTTTGTATCGCTGAAAGTATTTCAAAATCTTTGAATTTAGATTCTGATTCAACGGTGATTTCAGCACTCTCTTATTGCAGAAATCTTCATCAATTATCGAAAACTATTCCGATTTAGGCATATGTATATTGTGAAAACAATAGTTCATTTGCGAGGATTCAATTGAATCAGTGTGTTTAACTTCGTTTGGAAACACAGTAAGGCTAACGTTAGGGCGAAATATTCGCGAGTTTCGGTATTTCCAATTCCATGAGCATTGTTTCTCTACTCGACGTAATTTAACAATGATCTGATGCTCCAAATAGATTTCTTCAGCTCTGAACTTTGTCGGTTCAGAGGTGACTTCGATCGGTTGCATTTGGCTCTTTCAGTTGATCAAGCCAAACAATAGAAAGTTCGTATTAGATTTCATTTGCTCAAATTCTTGTTAATTAAGATACCAGGGTGTCAGGATGAATAAATAGATTCGTTTTTCTTTTTCAAATTCCATCTTGCTTGCTGAATTTGCAATCATATTCTTTGAAATTGGTAATGTGTCTTTACTCTTTAGTATATAAAATTCCAGTGATGTTATTAGCAAGCTTATGCCTACTGAGAAGTTTGTGTGACCAATCAATATCCATAGTGTTGATCTTAGGCTCATCAATCTATCTGGGATCTTAGGTTATTAGCAACCTCATCAATCCATAAGTGTATATTATTTATAGCTCATTCAATTGTTACGATAGTAAAGCTGAAAATGGTCATACACCGTGAACGACTATTTACAAAAAGAAAAAAAAAAAAAAAATTGGTAGAGATGTATATGGTAGATAGTTATATATAGTAGGTGGTTATATGTGATAAACGTATGTGTGTGTATATATATATATTGTAAACTGAGACCGTGCTTTCAAAACTTATTTATGCATTCTTTGTTTTCTTCCTACTAAATTCTACTACCGTACATTCTTGAAGTTATCAATATAAACCTTTAATCAATATTTTTCTCCTGTATTTTCTCTCTTCTATTCTTTGTGTTCATCTAGATTGAGTGTGTACATTGTTGTGTGATCCTAATTGTTTTTCCCATCGTGATGCTCTTAATTTCATTTCTCACTAGGTGGCTGACATCAGGAGGTTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAATTGAGAATTCCTCTACCAGGAAGACATCCACCATCACCCAGCTTGTCTGATGCTTCTACTGTTACAGGGTATTCCTTGCTGTGAATTTCTAGATGAGTTTATATCTTTCTATTATTAAGCTTTCTGTTTGCCTATATTTTCTGATCATACTTCATGTGTGGAAACGTGATTTAGTCGAGTCGATTGGTGGCTCTTAAAGTAAATTTAGCGTATGCACATTGAGGCTTTGGTTAGGGGTGGGAAATGGGAATCTTAAGAATCTTATTGTAACATACTTTAAAAACCAAGGAATTGCTCATGTGGTTAGCTAGTTTCAAGTTGTAGACATGTTTTATAGGATCATGGCGCTGTCTAACAACTTACGTCGTAGTGAACACGTTTATTATTTTTAAATTTGAATATTGTGAAGGCAAAGGTGGTTATAAATTATAACATTTGCACGAAATACATTACATGCCTAGAGAACGTAATATCAGTTTGAAGTATGCATTTCAACGTTTTCTTATTCTAATGATTGAAATTTGCATCATAAACATCTTATGCAGCATGCTATCTTGAGAATTGGTATAATTTCCAATTTCTTGGAGTTTCCAACAGACTTCCTTCCTTGATTTTGTTTGAAAAGTATCGTCCCGAAGTAGTAATATAGTTGAATATATGTCGAAAGTTTTGAAATTGTTCAACTTTGTACAGATATTATAATTTTAAAGATTTGATTCAGATGGTATAATCTGTTCTCCTTGGCTGTGGATTGGACAATATCCAGAAAATTTACTGTTCAGGTTTGTCTAATATAGATTTTGCTAAATGTATTGCAGAAGTGGATCTGTAAATGAAGAACCTCTACATCTAGGCCAACCAACTGATATGCTAAACTCTTTGCAATCTTCGAGATTGAAATCACCGAACCCGAATGCCTCCCCTGCCATGAGCACATTACAAAAGTATTATGGTCTAGTATCACGAACAGTCGAGAGTGCACCCGAAGGTATGGAGATGGCATTATACAGAACTGAGAATTCAAATTTCATTGATGATGGGTTGTTTCCCAAAACCTCTGAGCTTTCTACACCACCATCAAACATTCACTCGAAGACCAGGAAATACGCCGGTAGTTTCTGGCCTGAGAACGACTCAATAACCGAACATCTATTATGTACAGAACCTGGAGATGGAGAGAATGAAAAATCTGATGAGAAGCTAGTTCGCAGGCGTCAAAAGGCTGAAAATGGCGTTGGCACCCAAGAGAGATCGTCGAAGGGCGAAAACAGTGGCGGAAGCTTCTTTTCTGGTTCAAATGGGAAGAGTTTAGCCATGAGGCTAAAATCAGTTAGCAGATCAATGTTGCTATCGGATTCGGATCCCGTTCGGATAAACTCGATTCCAGTAGGATTAGGAGATGCTATAATCACTGATGGAATTTCTGAAGTTCATAAATCATTAAGTACATCAAACCTGAGAGACCAAGATAGCAGCAGCAGCAGCAGCAGCAGTTCAGCATCTGTGTGGGCAACAACAAGGTGGAGTTTAAAGCCGGACTTGCAAGCTCTCTCAAGTGCTTCAATCACAAAGCCACTCTTCGATGGTTTGCCAAATCCAATCACAGGGCGCAGGAACAAAGCAGCTCTTGATTAA

mRNA sequence

TAATTGATCTTTAAATTTTCTTCATCGGAGCAAACGGCGCCTTTTGAGTGGTAGGTGTTGGTAGGTGAAGATTTCTTCCGATCGTAAGATCAGATCCTTCCTCCCAAATTCGATTGAAGACGAATTCGAAGAAGAAGTTCGTGTAGATGTCCCCGTCAAATAGTTCGTCAAGTGGAGTTAGTGGACATGGTGGACCGAATTACATAGAACATCAAATTTCCAAAATGGATACTCTCGCCGGCATCGCCATTAAGTATGGAGTCGAGGTGGCTGACATCAGGAGGTTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAATTGAGAATTCCTCTACCAGGAAGACATCCACCATCACCCAGCTTGTCTGATGCTTCTACTGTTACAGGAAGTGGATCTGTAAATGAAGAACCTCTACATCTAGGCCAACCAACTGATATGCTAAACTCTTTGCAATCTTCGAGATTGAAATCACCGAACCCGAATGCCTCCCCTGCCATGAGCACATTACAAAAGTATTATGGTCTAGTATCACGAACAGTCGAGAGTGCACCCGAAGGTATGGAGATGGCATTATACAGAACTGAGAATTCAAATTTCATTGATGATGGGTTGTTTCCCAAAACCTCTGAGCTTTCTACACCACCATCAAACATTCACTCGAAGACCAGGAAATACGCCGGTAGTTTCTGGCCTGAGAACGACTCAATAACCGAACATCTATTATGTACAGAACCTGGAGATGGAGAGAATGAAAAATCTGATGAGAAGCTAGTTCGCAGGCGTCAAAAGGCTGAAAATGGCGTTGGCACCCAAGAGAGATCGTCGAAGGGCGAAAACAGTGGCGGAAGCTTCTTTTCTGGTTCAAATGGGAAGAGTTTAGCCATGAGGCTAAAATCAGTTAGCAGATCAATGTTGCTATCGGATTCGGATCCCGTTCGGATAAACTCGATTCCAGTAGGATTAGGAGATGCTATAATCACTGATGGAATTTCTGAAGTTCATAAATCATTAAGTACATCAAACCTGAGAGACCAAGATAGCAGCAGCAGCAGCAGCAGCAGTTCAGCATCTGTGTGGGCAACAACAAGGTGGAGTTTAAAGCCGGACTTGCAAGCTCTCTCAAGTGCTTCAATCACAAAGCCACTCTTCGATGGTTTGCCAAATCCAATCACAGGGCGCAGGAACAAAGCAGCTCTTGATTAA

Coding sequence (CDS)

ATGTCCCCGTCAAATAGTTCGTCAAGTGGAGTTAGTGGACATGGTGGACCGAATTACATAGAACATCAAATTTCCAAAATGGATACTCTCGCCGGCATCGCCATTAAGTATGGAGTCGAGGTGGCTGACATCAGGAGGTTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAATTGAGAATTCCTCTACCAGGAAGACATCCACCATCACCCAGCTTGTCTGATGCTTCTACTGTTACAGGAAGTGGATCTGTAAATGAAGAACCTCTACATCTAGGCCAACCAACTGATATGCTAAACTCTTTGCAATCTTCGAGATTGAAATCACCGAACCCGAATGCCTCCCCTGCCATGAGCACATTACAAAAGTATTATGGTCTAGTATCACGAACAGTCGAGAGTGCACCCGAAGGTATGGAGATGGCATTATACAGAACTGAGAATTCAAATTTCATTGATGATGGGTTGTTTCCCAAAACCTCTGAGCTTTCTACACCACCATCAAACATTCACTCGAAGACCAGGAAATACGCCGGTAGTTTCTGGCCTGAGAACGACTCAATAACCGAACATCTATTATGTACAGAACCTGGAGATGGAGAGAATGAAAAATCTGATGAGAAGCTAGTTCGCAGGCGTCAAAAGGCTGAAAATGGCGTTGGCACCCAAGAGAGATCGTCGAAGGGCGAAAACAGTGGCGGAAGCTTCTTTTCTGGTTCAAATGGGAAGAGTTTAGCCATGAGGCTAAAATCAGTTAGCAGATCAATGTTGCTATCGGATTCGGATCCCGTTCGGATAAACTCGATTCCAGTAGGATTAGGAGATGCTATAATCACTGATGGAATTTCTGAAGTTCATAAATCATTAAGTACATCAAACCTGAGAGACCAAGATAGCAGCAGCAGCAGCAGCAGCAGTTCAGCATCTGTGTGGGCAACAACAAGGTGGAGTTTAAAGCCGGACTTGCAAGCTCTCTCAAGTGCTTCAATCACAAAGCCACTCTTCGATGGTTTGCCAAATCCAATCACAGGGCGCAGGAACAAAGCAGCTCTTGATTAA

Protein sequence

MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPAMSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKYAGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQDSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD

Homology

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BLAST of Carg06652 vs. NCBI nr
Match: XP_023542393.1 (uncharacterized protein LOC111802312 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 642.1 bits (1655), Expect = 1.1e-180
Identity = 346/355 (97.46%), Postives = 347/355 (97.75%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNP ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGLVSRTVE APEGMEMALY+TENSNFIDDGLFPKTSELSTPPSNIHSKTRKY
Sbjct: 121 MSTLQKYYGLVSRTVEKAPEGMEMALYKTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFF 240
           AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVG  ERSSKGENSGGSFF
Sbjct: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGISERSSKGENSGGSFF 240

Query: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRXX 300
           SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR  
Sbjct: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR-- 300

Query: 301 XXXXXXXXXXXXXWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
            XXXXXXXXXXX WATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 DXXXXXXXXXXXVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 353

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BLAST of Carg06652 vs. NCBI nr
Match: XP_022994944.1 (uncharacterized protein LOC111490532 [Cucurbita maxima])

HSP 1 Score: 636.7 bits (1641), Expect = 4.6e-179
Identity = 334/355 (94.08%), Postives = 338/355 (95.21%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNP ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGLVSRTVE+AP+GMEMALY+TENSNFIDDGLFPKTSELSTPPSNIHSKTRKY
Sbjct: 121 MSTLQKYYGLVSRTVENAPKGMEMALYKTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFF 240
           AGS WPENDSITEHLLCTEPGDGE+EKSDEKLVRRRQKAENGVG  ERSSKGENSGGSFF
Sbjct: 181 AGSIWPENDSITEHLLCTEPGDGESEKSDEKLVRRRQKAENGVGAPERSSKGENSGGSFF 240

Query: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRXX 300
           SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR  
Sbjct: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR-- 300

Query: 301 XXXXXXXXXXXXXWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
                  XX    WATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 -DQDSSSXXSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 352

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BLAST of Carg06652 vs. NCBI nr
Match: XP_022954511.1 (uncharacterized protein LOC111456756 [Cucurbita moschata])

HSP 1 Score: 633.6 bits (1633), Expect = 3.9e-178
Identity = 333/355 (93.80%), Postives = 336/355 (94.65%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNS  SSRLKSPNP ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSSPSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGLVSRTVE+APEGMEMALYRTE+SNFIDDGLFPKTSELSTPPSNIHSKTRKY
Sbjct: 121 MSTLQKYYGLVSRTVENAPEGMEMALYRTEDSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFF 240
           AGSFWPEN+SITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGT ERSSKGENS G FF
Sbjct: 181 AGSFWPENESITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTPERSSKGENSSGGFF 240

Query: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRXX 300
           SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR  
Sbjct: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR-- 300

Query: 301 XXXXXXXXXXXXXWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
                  XX    WATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 -DQDSSSXXSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 352

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BLAST of Carg06652 vs. NCBI nr
Match: XP_008467281.1 (PREDICTED: uncharacterized protein LOC103504667 isoform X1 [Cucumis melo])

HSP 1 Score: 538.5 bits (1386), Expect = 1.7e-149
Identity = 287/357 (80.39%), Postives = 311/357 (87.11%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSS+SGV+GHGG NYIEHQIS+MDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSASGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDAS VTG+GSVNEEPLHLGQPT+MLNSLQS RLKSPN  ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGL S+T++++   MEM++YRTENSN I DGLF +TS LSTPP NI+SKTRKY
Sbjct: 121 MSTLQKYYGLSSQTLKTSSVDMEMSVYRTENSNSISDGLFSRTSVLSTPPPNIYSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAE--NGVGTQERSSKGENSGGS 240
           AGSFW ENDSITEHLL T+ GDGE+EKSDEKLVRRRQKAE  NGV T ERS K ENS GS
Sbjct: 181 AGSFWTENDSITEHLLRTDSGDGESEKSDEKLVRRRQKAEVDNGVTTAERSLKSENSNGS 240

Query: 241 FFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR 300
           +FS SNGKSLAMRLKSVSR++L SDSDPVRINSIPVGLGD IIT+G  EVHKSLSTSNLR
Sbjct: 241 YFSPSNGKSLAMRLKSVSRTVLSSDSDPVRINSIPVGLGDDIITNGTPEVHKSLSTSNLR 300

Query: 301 XXXXXXXXXXXXXXXWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
                          W+T++WSLKPDLQALSS +I KPLFDGLPNPITGRRNKAALD
Sbjct: 301 -----DQDNSNSTFVWSTSKWSLKPDLQALSSVAIAKPLFDGLPNPITGRRNKAALD 352

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BLAST of Carg06652 vs. NCBI nr
Match: XP_022137657.1 (uncharacterized protein LOC111009048 isoform X1 [Momordica charantia])

HSP 1 Score: 536.2 bits (1380), Expect = 8.5e-149
Identity = 288/358 (80.45%), Postives = 305/358 (85.20%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSS+SG+SGHGGPNYIEHQIS+MDTLAGIAIKYGVEVADI+RLNGLAADLQMFALK
Sbjct: 1   MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRH PSPSLSDAS +TGSG VNEEPLHLGQPT MLNSLQS RLK PN  AS A
Sbjct: 61  KLRIPLPGRHLPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGL S+T+E A EGMEMA+YRTENSN  DDGLF +TS LS PP NIH K RKY
Sbjct: 121 MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAE--NGVGTQERSSKGENSGGS 240
           AGSF+PENDSITEHLL  EPGDGE+EKSDEKLVRRRQK E  NG+GT ER  KGENSGG 
Sbjct: 181 AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGG 240

Query: 241 FFS-GSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNL 300
           +FS  SNGK LAMR KSVSRSMLL D+DPV INSIPVGLGDAIITDGISEVHKS STSNL
Sbjct: 241 YFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNL 300

Query: 301 RXXXXXXXXXXXXXXXWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           R               W TT+WSLKPDLQALSS +I+KPLFDGLPNPITGRRNKAALD
Sbjct: 301 R-----DQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 353

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BLAST of Carg06652 vs. TAIR10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 225.3 bits (573), Expect = 5.8e-59
Identity = 160/353 (45.33%), Postives = 203/353 (57.51%), Query Frame = 0


Query: 19  YIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPLPGRHPPSPSLSD 78
           YIEH+ISK DTLAG+AIKYGVEVAD++++N L  DLQMFALK L+IPLPGRHPPSP LS+
Sbjct: 77  YIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFALKSLQIPLPGRHPPSPCLSN 136

Query: 79  ASTVTGSG---SVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPAMSTLQKYYGL--VSR 138
            S   G G      E P H  Q  ++ +S QS RLKS     SPAM +LQ YYGL    R
Sbjct: 137 GSLNHGEGCSCHEPESPNHSEQ--EVFDSFQSLRLKSSEKKVSPAMYSLQGYYGLKPADR 196

Query: 139 TVESAPEGMEMALYRTENSNFI----DDGL---FPKTSELSTPPSNIHSKTRKYAGSFWP 198
           TV S     EM  Y+TE S+ I    D+G    FP T+     P N H K+R    +   
Sbjct: 197 TV-SDGGCFEMGNYKTETSHHIFNNGDNGYLRPFPSTN----TPLNHHRKSRSLVNALIE 256

Query: 199 ENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVG--TQERSSKGEN--SGGSFFSG 258
           E +          P +   E + +K +RRRQK+E      T E   K EN  S G F S 
Sbjct: 257 EVNQ--------SPDNNTQEPTSDKFMRRRQKSEADFSSRTPELVLKEENGSSNGGFLSI 316

Query: 259 SNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRXXXX 318
           + GK LA+R K+ SR+ L ++S+    N + + L DA ++D  S V KS S S+L+    
Sbjct: 317 A-GKGLALRSKASSRTNLAAESENGNFNPVSMNLMDAPVSDSFSSVRKSSSASSLQ--DP 376

Query: 319 XXXXXXXXXXXWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
                      W T++WSLKPDL  L+ A+IT  +FDGLP P+TGRRNK ALD
Sbjct: 377 DGNSNNGSLSLWPTSKWSLKPDL--LTPAAITSSIFDGLPKPLTGRRNKTALD 409

[Close]

BLAST of Carg06652 vs. TAIR10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 217.2 bits (552), Expect = 1.6e-56
Identity = 151/358 (42.18%), Postives = 204/358 (56.98%), Query Frame = 0


Query: 3   PSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKL 62
           P++S  S  S   G  YIEH++SK DTLAGIAIKYGVEVADI +LNGL  DLQMFAL+ L
Sbjct: 55  PTSSPPSSASTCAG--YIEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESL 114

Query: 63  RIPLPGRHPPSPSLSDASTVTGS--GSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 122
           RIPLPGRHPPSP LS+ S   G             G   D+ +S QS RL       SPA
Sbjct: 115 RIPLPGRHPPSPCLSNGSLNHGEDWSEQASSSASNGNHQDVFDSFQSLRLNHSEKKISPA 174

Query: 123 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 182
           M++LQ YYGL  +    A EG  MA+Y+ E S   D+  +      ++ P + H K+R  
Sbjct: 175 MNSLQGYYGLKPKN-RRASEGFGMAVYKNEASQLQDNDQYLTPFPATSTPLSHHRKSRSL 234

Query: 183 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQ--ERSSKGEN-SGG 242
             +   E   + +    ++ G GE   +D K +RRRQK+E    ++  E   K EN S  
Sbjct: 235 VDAVIAE---VNQSPNPSKAGGGEVNSTD-KPMRRRQKSEADFSSRAPELLLKEENRSSS 294

Query: 243 SFFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNL 302
             FS   GK+LA+R K+ SR+ L +++    +NSIP+ L DA + D  S V KS+S S+L
Sbjct: 295 GAFSAIAGKNLALRSKASSRANLSAETR--HLNSIPINLMDAPVGDSFSSVRKSVSASSL 354

Query: 303 RXXXXXXXXXXXXXXXWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           +               W T++W+LKP+L  L+  ++   +FDGLP P+TGRRNK A+D
Sbjct: 355 Q----EPNCNSNGSSLWPTSKWTLKPEL--LTQVAMASSIFDGLPKPLTGRRNKKAVD 397

[Close]

BLAST of Carg06652 vs. TAIR10
Match: AT1G55000.1 (peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04
Identity = 18/47 (38.30%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 20  IEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPL 67
           I H+I + D++  +A+KY V+V DI+RLN + +D  +++  +L IP+
Sbjct: 74  ISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

[Close]

BLAST of Carg06652 vs. Swiss-Prot
Match: sp|Q3B7I8|LYSM2_XENTR (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus tropicalis OX=8364 GN=lysmd2 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-04
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 7   SSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPL 66
           S++ V+      YIEH++S  DTL GIA+KYGV +  I+R N L +   +F  K L IP+
Sbjct: 48  STASVAAPLSERYIEHRLSPSDTLQGIALKYGVTMEQIKRANKLFSTDCIFLRKSLNIPV 107

[Close]

BLAST of Carg06652 vs. Swiss-Prot
Match: sp|A0JNI1|LYSM1_BOVIN (LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Bos taurus OX=9913 GN=LYSMD1 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.3e-04
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 20 IEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPL 67
          +EHQ++  DTLAG+A+KYGV +  I+R N L  +  +F  K L IP+
Sbjct: 40 LEHQLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLHIPI 86

[Close]

BLAST of Carg06652 vs. Swiss-Prot
Match: sp|Q6P606|LYSM4_DANRE (LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Danio rerio OX=7955 GN=lysmd4 PE=2 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 2.3e-04
Identity = 28/90 (31.11%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 20  IEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPLPGRHPPSPSLSDA 79
           +E  IS  D L+ +A++YG +VADI+R+N L  +  M+ALK ++IP+      + ++S+ 
Sbjct: 70  LERDISHEDNLSKLALQYGCKVADIKRVNNLFQEQDMYALKSIKIPVRKHGLLTEAISEL 129

Query: 80  STVTGSGSVNEEPLHLGQPTDMLNSLQSSR 110
            T        + P H   P++   +  S R
Sbjct: 130 RT------PQQRPSHDAAPSNSAMASVSGR 153

[Close]

BLAST of Carg06652 vs. Swiss-Prot
Match: sp|Q99LE3|LYSM3_MOUSE (LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Mus musculus OX=10090 GN=Lysmd3 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 29/83 (34.94%), Postives = 42/83 (50.60%), Query Frame = 0


Query: 24  ISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRI-------------PLPGRH 83
           I + DTL  +A++Y   VADI+R+N L +D   FAL+ ++I             PL GRH
Sbjct: 69  IQEGDTLNAVALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKRFSSLTETLHPLKGRH 128

Query: 84  ----PPSPSLSDASTVTGSGSVN 90
               PP P   +   V   GS++
Sbjct: 129 ILHPPPVPYFQEQDIVPADGSLS 151

[Close]

BLAST of Carg06652 vs. Swiss-Prot
Match: sp|Q9D7V2|LYSM2_MOUSE (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Lysmd2 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 3.9e-04
Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 0


Query: 19  YIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPLPGRHP------P 78
           ++EH++   DTL GIA+KYGV +  I+R N L  +  +F  K L IP+    P       
Sbjct: 70  HVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLSIPILSEKPLLFNGLN 129

Query: 79  SPSLSDASTVTGSGSVNEEPL 94
           S    ++ TV  S    EEP+
Sbjct: 130 SIDSPESETVDSSFCQEEEPV 150

[Close]

BLAST of Carg06652 vs. TrEMBL
Match: tr|A0A1S3CUG8|A0A1S3CUG8_CUCME (uncharacterized protein LOC103504667 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504667 PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.1e-149
Identity = 287/357 (80.39%), Postives = 311/357 (87.11%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSS+SGV+GHGG NYIEHQIS+MDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSASGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDAS VTG+GSVNEEPLHLGQPT+MLNSLQS RLKSPN  ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGL S+T++++   MEM++YRTENSN I DGLF +TS LSTPP NI+SKTRKY
Sbjct: 121 MSTLQKYYGLSSQTLKTSSVDMEMSVYRTENSNSISDGLFSRTSVLSTPPPNIYSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAE--NGVGTQERSSKGENSGGS 240
           AGSFW ENDSITEHLL T+ GDGE+EKSDEKLVRRRQKAE  NGV T ERS K ENS GS
Sbjct: 181 AGSFWTENDSITEHLLRTDSGDGESEKSDEKLVRRRQKAEVDNGVTTAERSLKSENSNGS 240

Query: 241 FFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR 300
           +FS SNGKSLAMRLKSVSR++L SDSDPVRINSIPVGLGD IIT+G  EVHKSLSTSNLR
Sbjct: 241 YFSPSNGKSLAMRLKSVSRTVLSSDSDPVRINSIPVGLGDDIITNGTPEVHKSLSTSNLR 300

Query: 301 XXXXXXXXXXXXXXXWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
                          W+T++WSLKPDLQALSS +I KPLFDGLPNPITGRRNKAALD
Sbjct: 301 -----DQDNSNSTFVWSTSKWSLKPDLQALSSVAIAKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of Carg06652 vs. TrEMBL
Match: tr|A0A0A0LQZ4|A0A0A0LQZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043110 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 1.8e-147
Identity = 285/357 (79.83%), Postives = 307/357 (85.99%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSS SGV+GHGG NYIEHQIS+MDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSPSGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSD S VTG+GSVNEEPLHLGQPT+MLNSLQS RLKSPN  ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGL S+T+E++   MEM++YRTENSN   DGLF +TS LSTPP NI+SKTRKY
Sbjct: 121 MSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAE--NGVGTQERSSKGENSGGS 240
           AGSFW +NDSITEHLL T+ GD E+EKSDEKLVRRRQKAE  NGV T ERS KGENS G+
Sbjct: 181 AGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGENSNGN 240

Query: 241 FFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR 300
           +FS SNGKSLAMRLKS SR+ LLSDSDPV INSIPVGLGD IITDG SEVHKSLSTSNLR
Sbjct: 241 YFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLSTSNLR 300

Query: 301 XXXXXXXXXXXXXXXWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
                          W+T +WSLKPDLQALSS +I+KPLFDGLPNPITGRRNKAALD
Sbjct: 301 -----DQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of Carg06652 vs. TrEMBL
Match: tr|A0A1S3CT73|A0A1S3CT73_CUCME (uncharacterized protein LOC103504667 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504667 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.5e-120
Identity = 236/302 (78.15%), Postives = 257/302 (85.10%), Query Frame = 0


Query: 56  MFALKKLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNP 115
           MFALKKLRIPLPGRHPPSPSLSDAS VTG+GSVNEEPLHLGQPT+MLNSLQS RLKSPN 
Sbjct: 1   MFALKKLRIPLPGRHPPSPSLSDASAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQ 60

Query: 116 NASPAMSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHS 175
            ASPAMSTLQKYYGL S+T++++   MEM++YRTENSN I DGLF +TS LSTPP NI+S
Sbjct: 61  KASPAMSTLQKYYGLSSQTLKTSSVDMEMSVYRTENSNSISDGLFSRTSVLSTPPPNIYS 120

Query: 176 KTRKYAGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAE--NGVGTQERSSKGE 235
           KTRKYAGSFW ENDSITEHLL T+ GDGE+EKSDEKLVRRRQKAE  NGV T ERS K E
Sbjct: 121 KTRKYAGSFWTENDSITEHLLRTDSGDGESEKSDEKLVRRRQKAEVDNGVTTAERSLKSE 180

Query: 236 NSGGSFFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLS 295
           NS GS+FS SNGKSLAMRLKSVSR++L SDSDPVRINSIPVGLGD IIT+G  EVHKSLS
Sbjct: 181 NSNGSYFSPSNGKSLAMRLKSVSRTVLSSDSDPVRINSIPVGLGDDIITNGTPEVHKSLS 240

Query: 296 TSNLRXXXXXXXXXXXXXXXWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAA 355
           TSNLR               W+T++WSLKPDLQALSS +I KPLFDGLPNPITGRRNKAA
Sbjct: 241 TSNLR-----DQDNSNSTFVWSTSKWSLKPDLQALSSVAIAKPLFDGLPNPITGRRNKAA 297

[Close]

BLAST of Carg06652 vs. TrEMBL
Match: tr|A0A2N9GUV0|A0A2N9GUV0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30946 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.5e-97
Identity = 209/358 (58.38%), Postives = 246/358 (68.72%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSN   S        NYIEHQ+SK DTLAG+AIKYGVEVADI+R+NGLA+DLQMFALK
Sbjct: 1   MSPSNGRRSSGGEGVNCNYIEHQVSKFDTLAGVAIKYGVEVADIKRMNGLASDLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
            L+IPLPGRH PSP LS+AS   G  S  + P  LGQ ++ML S Q  RLK+P    SPA
Sbjct: 61  TLQIPLPGRHSPSPILSNASASPGENSTEKIPSRLGQ-SNMLGSFQLPRLKTPQQKVSPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQK+YGL S  V    EG EMA+Y+T +S++ DDG   K S +S PPSN H  +R  
Sbjct: 121 MSTLQKFYGLQSPNVNCVAEGTEMAVYKTGSSDYFDDGPLFKASPISGPPSNRHQNSRNS 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAE--NGVGTQERSSKGENSG-G 240
              F+PEN S+ E     EPGDGE EKSDEK VRRR KAE   G GT ER  KGENSG  
Sbjct: 181 VNGFFPENGSVAEDQTLVEPGDGEGEKSDEKSVRRRPKAEVDTGAGTPERLLKGENSGES 240

Query: 241 SFFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNL 300
           S FS S GK LAMR KS SR+ LL DS+   +N IPVGLG++II DG++ V KS STS+L
Sbjct: 241 SGFSASTGKGLAMRPKSASRTTLLFDSESGWLNPIPVGLGESIIADGLAAVRKSFSTSSL 300

Query: 301 RXXXXXXXXXXXXXXXWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           +               W T++WSLKPDLQALS+A+I  P+FDGLP PI+GR+NKAALD
Sbjct: 301 K-----DQENNNSTSVWPTSKWSLKPDLQALSTAAI-GPIFDGLPKPISGRKNKAALD 351

[Close]

BLAST of Carg06652 vs. TrEMBL
Match: tr|A0A2P4HVG5|A0A2P4HVG5_QUESU (Lysm and putative peptidoglycan-binding domain-containing protein 2 OS=Quercus suber OX=58331 GN=CFP56_55327 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.8e-94
Identity = 199/339 (58.70%), Postives = 238/339 (70.21%), Query Frame = 0


Query: 20  IEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPLPGRHPPSPSLSDA 79
           IEHQ+SK DTLAG+AIKYGVEVADI+R+NGLA DLQMFALK L+IPLPGRHPPSPSLS+ 
Sbjct: 29  IEHQVSKFDTLAGVAIKYGVEVADIKRMNGLATDLQMFALKTLQIPLPGRHPPSPSLSNG 88

Query: 80  STVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPAMSTLQKYYGLVSRTVESAP 139
           S   G  S  +    LGQ +++L S Q  R K+P    SPAMSTLQK+YGL S  ++   
Sbjct: 89  SASQGGNSTEKSSSRLGQ-SNILGSFQLPRSKTPQ-QVSPAMSTLQKFYGLQSPNLKDTA 148

Query: 140 EGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKYAGSFWPENDSITEHLLCTE 199
           EG EM++Y++ +S++ DD L  K S +S PPSN H  +R     F PEN  + EH    E
Sbjct: 149 EGTEMSVYKSGSSDYFDDELLLKASPISGPPSNHHQNSRNSVNGFLPENGQVVEHWNLAE 208

Query: 200 PGDGENEKSDEKLVRRRQKAE--NGVGTQERSSKGENSGGSF-FSGSNGKSLAMRLKSVS 259
           PGDGE EKSDEK VRRR K E  +G GT ER  KGENSGGS  FS S GK LAMR KS S
Sbjct: 209 PGDGEGEKSDEKPVRRRPKPEVDSGAGTPERLLKGENSGGSSGFSASTGKGLAMRPKSAS 268

Query: 260 RSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRXXXXXXXXXXXXXXXWAT 319
           R+ L SDS+   +NSIPVGLGD+II DG+S V KS STS+L+               W T
Sbjct: 269 RTTLFSDSESGWLNSIPVGLGDSIIADGLSTVRKSSSTSSLK-----DQETNNSTSAWPT 328

Query: 320 TRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           ++WSLK DLQ+LS+A+IT P+FDGLP PI+GRRNKAALD
Sbjct: 329 SKWSLKQDLQSLSTAAITLPIFDGLPKPISGRRNKAALD 360

The following BLAST results are available for this feature:

BLAST of Carg06652 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542393.1	1.1e-180	97.46	uncharacterized protein LOC111802312 [Cucurbita pepo subsp. pepo]	[more]
XP_022994944.1	4.6e-179	94.08	uncharacterized protein LOC111490532 [Cucurbita maxima]	[more]
XP_022954511.1	3.9e-178	93.80	uncharacterized protein LOC111456756 [Cucurbita moschata]	[more]
XP_008467281.1	1.7e-149	80.39	PREDICTED: uncharacterized protein LOC103504667 isoform X1 [Cucumis melo]	[more]
XP_022137657.1	8.5e-149	80.45	uncharacterized protein LOC111009048 isoform X1 [Momordica charantia]	[more]

BLAST of Carg06652 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08200.1	5.8e-59	45.33	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G23130.1	1.6e-56	42.18	Peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.1	1.4e-04	38.30	peptidoglycan-binding LysM domain-containing protein	[more]

BLAST of Carg06652 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q3B7I8\|LYSM2_XENTR	1.3e-04	43.33	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus t...	[more]
sp\|A0JNI1\|LYSM1_BOVIN	2.3e-04	46.81	LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Bos tauru...	[more]
sp\|Q6P606\|LYSM4_DANRE	2.3e-04	31.11	LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Danio rer...	[more]
sp\|Q99LE3\|LYSM3_MOUSE	3.0e-04	34.94	LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Mus muscu...	[more]
sp\|Q9D7V2\|LYSM2_MOUSE	3.9e-04	35.80	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Mus muscu...	[more]

BLAST of Carg06652 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CUG8\|A0A1S3CUG8_CUCME	1.1e-149	80.39	uncharacterized protein LOC103504667 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0LQZ4\|A0A0A0LQZ4_CUCSA	1.8e-147	79.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043110 PE=4 SV=1	[more]
tr\|A0A1S3CT73\|A0A1S3CT73_CUCME	2.5e-120	78.15	uncharacterized protein LOC103504667 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2N9GUV0\|A0A2N9GUV0_FAGSY	6.5e-97	58.38	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30946 PE=4 SV=1	[more]
tr\|A0A2P4HVG5\|A0A2P4HVG5_QUESU	1.8e-94	58.70	Lysm and putative peptidoglycan-binding domain-containing protein 2 OS=Quercus s...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036779	LysM_dom_sf
IPR018392	LysM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06652-RA	Carg06652-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018392	LysM domain	SMART	SM00257	LysM_2	coord: 21..65 e-value: 3.7E-4 score: 29.8
IPR018392	LysM domain	PFAM	PF01476	LysM	coord: 24..65 e-value: 5.8E-5 score: 23.0
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 20..64 score: 10.758
IPR018392	LysM domain	CDD	cd00118	LysM	coord: 20..64 e-value: 1.92118E-7 score: 46.3245
IPR036779	LysM domain superfamily	GENE3D	G3DSA:3.10.350.10		coord: 3..72 e-value: 2.7E-13 score: 51.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..242
None	No IPR available	PANTHER	PTHR20932:SF11	SUBFAMILY NOT NAMED	coord: 1..355
None	No IPR available	PANTHER	PTHR20932	LOC443603 PROTEIN-RELATED	coord: 1..355
None	No IPR available	SUPERFAMILY	SSF54106	LysM domain	coord: 20..65

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06652	Cla008386	Watermelon (97103) v1	carwmB0490
Carg06652	Csa1G043110	Cucumber (Chinese Long) v2	carcuB0523
Carg06652	MELO3C002164	Melon (DHL92) v3.5.1	carmeB0499
Carg06652	ClCG01G014850	Watermelon (Charleston Gray)	carwcgB0479
Carg06652	CSPI01G07510	Wild cucumber (PI 183967)	carcpiB0531
Carg06652	Cucsa.122240	Cucumber (Gy14) v1	carcgyB0568
Carg06652	CmaCh18G000980	Cucurbita maxima (Rimu)	carcmaB0692
Carg06652	CmoCh18G000740	Cucurbita moschata (Rifu)	carcmoB0673
Carg06652	Lsi02G002690	Bottle gourd (USVL1VR-Ls)	carlsiB447
Carg06652	Cp4.1LG09g11070	Cucurbita pepo (Zucchini)	carcpeB0694
Carg06652	CsGy1G007390	Cucumber (Gy14) v2	carcgybB0500
Carg06652	MELO3C002164.2	Melon (DHL92) v3.6.1	carmedB0504
Carg06652	CsaV3_1G007480	Cucumber (Chinese Long) v3	carcucB0529
Carg06652	Cla97C01G013870	Watermelon (97103) v2	carwmbB0516
Carg06652	Bhi08G001110	Wax gourd	carwgoB0600

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06652	Silver-seed gourd	carcarB411
Carg06652	Cucurbita maxima (Rimu)	carcmaB0690
Carg06652	Cucurbita moschata (Rifu)	carcmoB0671
Carg06652	Cucurbita pepo (Zucchini)	carcpeB0696