CSPI01G07510 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G07510
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Peptidoglycan-binding LysM domain protein, putative
Location	Chr1 : 4763215 .. 4766268 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTGTGAAAAAAATATTTTGGAATTTACTTTTCTACGTCAATTTTGTTCCTAATGATAAATAAATCCTCTTTGGAAAGGAAAAAAAGAAAATAATGTGAAAAAATAAGGTGTTCAAGTTTAATTCAAATGAATAGCGTCGAAGAGAGTCAAAGTAGAAAATGAAAAGCTTCATTTTGATCGATGAATTTGAAAGGGTACGCGCGTGTTATGATATGAAGATTGAAGAACAAAGCCTTTTCTTTTAATTATTGTTATTATTATTTAGTACTTCGATTTTACAGCTTCCAATTGAAAATCCAATCATTCTCTCCCACTTTTCTTTTTTGCTTTTAATTGATATTCTTCATCGGAGCAAACAGAGTGGTAGGTGAAGGTTTCTCTTTCTTCGGATCGTAAGATTAGATCCTTTCTTTCTTTCTTCTTCGTCTCAATTTGAAGAACGAGTTCGAACAATTTCGAGTAGATGTCCCCGTCGAATAGTTCACCCAGTGGAGTTAATGGACATGGAGGATCGAATTACATAGAGCATCAAATTTCTAGAATGGATACTCTCGCTGGAATCGCCATAAAGTACGGAGTCGAGGTAAACTTTCGTTGTTCCTTTTTCTTTCATCAAATTTTCTTATGTTGTTCTGTCGGTGTGATTTTTTTTTTCTTTTCCTGAGTTGACTTGATTCGATTTTGTGAGGTCTGGAAGGGAATTGAAGTTCTTAATTTTGATTCATTTTTTTTGGAGTGATTTCACCACGCCTATCAAACTTTATCCCAATTGTTGCATATGTATATTGTGATGATAATGTTTAATTGGGAGTTTGATTGTATCTATATGTTCAGTTTCGTTTGGAAACTCAGAATGTTTAATATTAGGGCGAAATGTTTATGTGTTTTTTTGTATATCCAATTCCATTAGCTGTGCTTCTCTGCTGGATGTACCTTAACAGTGTTCTGTTGCCCCAAATAGATATCTTCAGCTCTGAACTTCATCGGTTCTGAGGTTACTTTTGGTCGATTGCATTTGGCTGAGGGGAAAAGATGATGAAGCCAAACAATCGAAAGTTCGTATTGTATTTTATATGTTCATAGTCTTTGTTAACTTAAATGCCTCGGTTGCGGGATGAATAATCGATTATTCTTTATTTTCCACTCTATCTTGCTTACTGAAGTTCCCTTCATATTCTTTTAGTTCATAAAATTCTAACTAGGTTGTTAGTAGAGATTTGTTTGAACAATCATATCCTTAGGGTTGATCTTAGACTCATCAATCTATTTGTGATTTAATTGGTGGTTACCCTTATTTTCATTCCTTACTGATGCTCTAAAACGTATAGGTAGCTGACATTAGGAGATTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAGCTAAGAATTCCTCTACCGGGTAGACATCCGCCATCACCCAGCCTGTCTGATGGTTCTGCCGTTACTGGGTATTTCTTGTTGTCAATTTCTAGTAGAATTTATATCATTTTGTGGATTGTGATTAAGCTTTTAGTTTGTTTATGTTTGCTGCTCATACCTCAAAACTAAAGTCTGTCTTAGTCCAGTTGTCGATGCGCTGTTTTAAGCAAATATAGTATAGATACATTGAGGCTGCGGTTAGGGGTGTGAAATGAGATACTTGGGAATCTTATTGTTGCATATTTACAATCGGGGAACGAATCATGTGCGGAGTTTATTTTATGTTATAGTTATATACATGTTTTGTAGGATTATGACACCCATCTAAGTCGCGCCCAAACAACTTAAGTTGCAATCAACTGTGCATTAGTTTTAGCGATTAGATTGAGATTATTTTGCTGGGGTTATATAAATCATTATGCATAATTTGAGCATTTACCATGCTGATATTCGTTGCATAAAATTAGAACCCCCCTCCATGAACTGTTCAAGTTTTATCTAATGGATTTTTCCAAATGTATTGCAGAAATGGATCTGTAAATGAAGAGCCTCTACATTTAGGCCAACCTACCAATATGCTAAACTCTTTGCAATCTTGGAGATTGAAATCACCAAACCAAAAAGCCTCCCCTGCCATGAGCACATTGCAAAAATACTATGGTCTAAGTTCACAAACTCTTGAGACCTCGTCAGTAGACATGGAGATGTCTGTATACAGAACTGAAAATTCAAATTCCACTGGCGATGGGTTGTTTTCCAGAACCTCTGTACTCTCTACACCACCTCTAAACATTTACTCGAAGACCAGGAAATATGCTGGTAGTTTCTGGACTGATAATGACTCAATAACCGAGCATCTATTACGTACAGATTCCGGAGATGTAGAGAGTGAGAAATCTGATGAGAAATTAGTTCGAAGGCGTCAAAAAGCTGAAGTCGACAATGGTGTTACCACCACAGAGAGATCGCTGAAGGGCGAAAATAGCAACGGAAACTATTTTTCTCCTTCAAATGGAAAGAGTTTAGCCATGAGGCTAAAATCAGGTAGCAGAACTGCTCTGTTATCAGATTCAGATCCAGTGTGGATAAATTCGATTCCAGTAGGATTAGGAGATGATATAATTACTGATGGAACTTCTGAAGTTCATAAATCGTTAAGTACATCAAACCTGAGAGACCAAGATAACAGCAATTCAACGTCTGTATGGTCAACTGCAAAGTGGAGTTTGAAGCCAGACTTGCAAGCTCTCTCAAGCGTTGCAATCTCAAAACCATTGTTTGATGGTTTGCCAAATCCAATCACAGGCCGCAGGAACAAAGCTGCTCTTGATTAACCATGTTCATAACTCTGTTCATATTCTTGCTCGTCGAACTGCTTTGATTCATTCATTTGGGCCGGAAATTCTTTTGGGAAATGTTGTTACATGAATGTATAGGTAGGAAGGCAAAATAAGAGAGAGATTGACGTTTAAGGAAGTTGATAATAGTAAATACAACACCAAAATATATATATATATAGTTCTTTTCTTCTTGTCAGATTTGAGTCGTCTGGTGTAAGAGGCAGAAGCACTTTCATTTGTACTTAAGATTATTCGTTTCCGTTAACTTTCCAAGAAAAATAC

mRNA sequence

ATGTCCCCGTCGAATAGTTCACCCAGTGGAGTTAATGGACATGGAGGATCGAATTACATAGAGCATCAAATTTCTAGAATGGATACTCTCGCTGGAATCGCCATAAAGTACGGAGTCGAGGTAGCTGACATTAGGAGATTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAGCTAAGAATTCCTCTACCGGGTAGACATCCGCCATCACCCAGCCTGTCTGATGGTTCTGCCGTTACTGGAAATGGATCTGTAAATGAAGAGCCTCTACATTTAGGCCAACCTACCAATATGCTAAACTCTTTGCAATCTTGGAGATTGAAATCACCAAACCAAAAAGCCTCCCCTGCCATGAGCACATTGCAAAAATACTATGGTCTAAGTTCACAAACTCTTGAGACCTCGTCAGTAGACATGGAGATGTCTGTATACAGAACTGAAAATTCAAATTCCACTGGCGATGGGTTGTTTTCCAGAACCTCTGTACTCTCTACACCACCTCTAAACATTTACTCGAAGACCAGGAAATATGCTGGTAGTTTCTGGACTGATAATGACTCAATAACCGAGCATCTATTACGTACAGATTCCGGAGATGTAGAGAGTGAGAAATCTGATGAGAAATTAGTTCGAAGGCGTCAAAAAGCTGAAGTCGACAATGGTGTTACCACCACAGAGAGATCGCTGAAGGGCGAAAATAGCAACGGAAACTATTTTTCTCCTTCAAATGGAAAGAGTTTAGCCATGAGGCTAAAATCAGGTAGCAGAACTGCTCTGTTATCAGATTCAGATCCAGTGTGGATAAATTCGATTCCAGTAGGATTAGGAGATGATATAATTACTGATGGAACTTCTGAAGTTCATAAATCGTTAAGTACATCAAACCTGAGAGACCAAGATAACAGCAATTCAACGTCTGTATGGTCAACTGCAAAGTGGAGTTTGAAGCCAGACTTGCAAGCTCTCTCAAGCGTTGCAATCTCAAAACCATTGTTTGATGGTTTGCCAAATCCAATCACAGGCCGCAGGAACAAAGCTGCTCTTGATTAA

Coding sequence (CDS)

ATGTCCCCGTCGAATAGTTCACCCAGTGGAGTTAATGGACATGGAGGATCGAATTACATAGAGCATCAAATTTCTAGAATGGATACTCTCGCTGGAATCGCCATAAAGTACGGAGTCGAGGTAGCTGACATTAGGAGATTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAGCTAAGAATTCCTCTACCGGGTAGACATCCGCCATCACCCAGCCTGTCTGATGGTTCTGCCGTTACTGGAAATGGATCTGTAAATGAAGAGCCTCTACATTTAGGCCAACCTACCAATATGCTAAACTCTTTGCAATCTTGGAGATTGAAATCACCAAACCAAAAAGCCTCCCCTGCCATGAGCACATTGCAAAAATACTATGGTCTAAGTTCACAAACTCTTGAGACCTCGTCAGTAGACATGGAGATGTCTGTATACAGAACTGAAAATTCAAATTCCACTGGCGATGGGTTGTTTTCCAGAACCTCTGTACTCTCTACACCACCTCTAAACATTTACTCGAAGACCAGGAAATATGCTGGTAGTTTCTGGACTGATAATGACTCAATAACCGAGCATCTATTACGTACAGATTCCGGAGATGTAGAGAGTGAGAAATCTGATGAGAAATTAGTTCGAAGGCGTCAAAAAGCTGAAGTCGACAATGGTGTTACCACCACAGAGAGATCGCTGAAGGGCGAAAATAGCAACGGAAACTATTTTTCTCCTTCAAATGGAAAGAGTTTAGCCATGAGGCTAAAATCAGGTAGCAGAACTGCTCTGTTATCAGATTCAGATCCAGTGTGGATAAATTCGATTCCAGTAGGATTAGGAGATGATATAATTACTGATGGAACTTCTGAAGTTCATAAATCGTTAAGTACATCAAACCTGAGAGACCAAGATAACAGCAATTCAACGTCTGTATGGTCAACTGCAAAGTGGAGTTTGAAGCCAGACTTGCAAGCTCTCTCAAGCGTTGCAATCTCAAAACCATTGTTTGATGGTTTGCCAAATCCAATCACAGGCCGCAGGAACAAAGCTGCTCTTGATTAA

Homology

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BLAST of CSPI01G07510 vs. TrEMBL
Match: A0A0A0LQZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043110 PE=4 SV=1)

HSP 1 Score: 681.0 bits (1756), Expect = 7.6e-193
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 1


Query: 1   MSPSNSSPSGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSSPSGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSPSGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120
           KLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120

Query: 121 MSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYSKTRKY 180
           MSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYSKTRKY
Sbjct: 121 MSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYSKTRKY 180

Query: 181 AGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGENSNGN 240
           AGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGENSNGN
Sbjct: 181 AGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGENSNGN 240

Query: 241 YFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLSTSNLR 300
           YFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLSTSNLR
Sbjct: 241 YFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLSTSNLR 300

Query: 301 DQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 353
           DQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD
Sbjct: 301 DQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 352

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BLAST of CSPI01G07510 vs. TrEMBL
Match: A9PH52_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s03350g PE=2 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 6.4e-91
Identity = 198/361 (54.85%), Postives = 256/361 (70.91%), Query Frame = 1


Query: 1   MSPSNSSPSGVNGHG--------GSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAA 60
           MSPSNS+ +  NG G        G NYIEHQ+S+ DTLAG+AIKYGVEVAD++RLNGL+ 
Sbjct: 1   MSPSNSNIAISNGGGSGDSNSSTGKNYIEHQVSKRDTLAGVAIKYGVEVADVKRLNGLST 60

Query: 61  DLQMFALKKLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKS 120
           DLQMFALK L IPLPGRHPPSP LS+GSA  G   V+  P    + +N+L +L+S  LKS
Sbjct: 61  DLQMFALKTLLIPLPGRHPPSPILSNGSASPGGNDVDMTP-PWPRHSNVLETLESLSLKS 120

Query: 121 PNQKASPAMSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLN 180
           P QK SPAMSTLQ +YGL S   + S+  MEM+VYR  + +   +GL  R + +S P  +
Sbjct: 121 PQQKVSPAMSTLQNFYGLKSSKRKDSAEGMEMAVYRRGSLDYLNEGLLHRATPVSGPSYS 180

Query: 181 IYSKTRKYAGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSL 240
            + ++   A  F ++N    E+   +++ + E EKS+EK VRRRQKA+ D    TTE+ L
Sbjct: 181 NH-RSINLADDFLSENGLAAEYNPLSEAREGEGEKSNEKFVRRRQKADADPRSGTTEKLL 240

Query: 241 KGENSNGNY-FSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVH 300
           K EN+ G+  FSP  GK L+MR KS SRT+L ++S+P W+N++PVGLGD II D +  V 
Sbjct: 241 KEENNGGSRAFSPVTGKGLSMRPKSASRTSLGAESEPGWLNAMPVGLGDSIIADVSDGVR 300

Query: 301 KSLSTSNLRDQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAAL 353
           KS ST +L+DQ+NS S+SVW T+KWSLKPDLQALS+ AIS P+FDGLP PI+GRR+KAAL
Sbjct: 301 KSSSTPSLQDQENSYSSSVWPTSKWSLKPDLQALSTAAISIPIFDGLPKPISGRRSKAAL 359

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BLAST of CSPI01G07510 vs. TrEMBL
Match: A0A067E112_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018429mg PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 6.4e-91
Identity = 205/365 (56.16%), Postives = 255/365 (69.86%), Query Frame = 1


Query: 1   MSPSNSSPSGVNGHGGS---NYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMF 60
           MSPS    SG+N +GG+   NYIEHQ+S+MDTLAG+AIKYGVEVADI+RLNGLA DLQMF
Sbjct: 1   MSPS----SGINSNGGANGWNYIEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMF 60

Query: 61  ALKKLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKS----- 120
           ALK L IPLPGRHPPSPSLSDGS+ +G  S+   P  LG  +N+L SL+S R +S     
Sbjct: 61  ALKTLHIPLPGRHPPSPSLSDGSSSSGENSMERTPPRLGY-SNILQSLESLRTESSKKGS 120

Query: 121 ----PNQKASPAMSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLST 180
                +QK S AMS LQKYYGL S   +      EM+VYRT +S    +GLF + S +S 
Sbjct: 121 LATGTSQKVSSAMSNLQKYYGLRSPNGKGKDEGTEMAVYRTGSSGHFDNGLFPKASPVSH 180

Query: 181 PPLNIYSKTRKYAGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTT 240
           P  N+  K++     F  +N +  +++   ++G+ E EKS+EK VRRRQKAE D+ V T 
Sbjct: 181 PFANLIHKSKSLVNGFLHENGATDDYVPLAEAGEGEGEKSNEKSVRRRQKAEADSRVGTP 240

Query: 241 ERSLKGENSNGNY-FSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGT 300
           ER LK ENS G+  FSP+ GK LAMR KS SRT+  SDS+  W++SIPVGLGD I+TDG 
Sbjct: 241 ERLLKEENSGGSSGFSPATGKGLAMRPKSASRTS-TSDSESGWLSSIPVGLGDSIMTDGP 300

Query: 301 SEVHKSLSTSNLRDQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRN 353
               KS ST +  DQD S+S+S+W T+KWSLKPDLQALS+VAI++P+FDGLP P   RR 
Sbjct: 301 VGFRKSSSTPSFIDQD-SSSSSIWPTSKWSLKPDLQALSTVAITRPIFDGLPKP--SRRG 356

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BLAST of CSPI01G07510 vs. TrEMBL
Match: V4TSH2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020822mg PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 6.4e-91
Identity = 205/365 (56.16%), Postives = 256/365 (70.14%), Query Frame = 1


Query: 1   MSPSNSSPSGVNGHGGS---NYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMF 60
           MSPS    SG+N +GG+   NYIEHQ+S+MDTLAG+AIKYGVEVADI+RLNGLA DLQMF
Sbjct: 1   MSPS----SGINSNGGANGWNYIEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMF 60

Query: 61  ALKKLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKS----- 120
           ALK L IPLPGRHPPSPSLSDGS+ +G  S+   P  LG  +N+L SL+S R +S     
Sbjct: 61  ALKTLHIPLPGRHPPSPSLSDGSSSSGENSMERTPPRLGY-SNILQSLESLRTESSKKGS 120

Query: 121 ----PNQKASPAMSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLST 180
                +QK S AMS LQKYYGL S   +      EM+VYRT +S    +GLF + S +S 
Sbjct: 121 LATGTSQKVSSAMSNLQKYYGLRSPNGKGKDEGTEMAVYRTGSSGHFDNGLFPKASPVSH 180

Query: 181 PPLNIYSKTRKYAGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTT 240
           P  ++  K++     F  +N +  +++   ++G+ E EKS+EK VRRRQKAE D+ V T 
Sbjct: 181 PFASLIHKSKSLVNGFLHENGATDDYVPLAEAGEGEGEKSNEKSVRRRQKAEADSRVGTP 240

Query: 241 ERSLKGENSNGNY-FSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGT 300
           ER LK ENS G+  FSP+ GK LAMR KS SRT+  SDS+  W++SIPVGLGD I+TDG 
Sbjct: 241 ERLLKEENSGGSSGFSPATGKGLAMRPKSASRTS-TSDSESGWLSSIPVGLGDSIMTDGP 300

Query: 301 SEVHKSLSTSNLRDQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRN 353
             V KS ST +  DQD S+S+S+W T+KWSLKPDLQALS+VAI++P+FDGLP P   RR 
Sbjct: 301 VGVRKSSSTPSFIDQD-SSSSSIWPTSKWSLKPDLQALSTVAITRPIFDGLPKP--SRRG 356

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BLAST of CSPI01G07510 vs. TrEMBL
Match: A0A067LBP9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17414 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 8.4e-91
Identity = 201/359 (55.99%), Postives = 255/359 (71.03%), Query Frame = 1


Query: 1   MSPSNSSPSGVNGHGGSN---YIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMF 60
           MSPSN++  GV+G G +N   YIEHQ+S++DTLAG+AIKYGVEVADI+RLNGLA DLQMF
Sbjct: 1   MSPSNAN--GVSGGGNANSKNYIEHQVSKLDTLAGVAIKYGVEVADIKRLNGLATDLQMF 60

Query: 61  ALKKLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQP--TNMLNSLQSWRLKSPNQ 120
           ALKKL IPLPGRHPPS  LS  SA  G  S++  P    QP  +N+L S +S R K   Q
Sbjct: 61  ALKKLLIPLPGRHPPSSILSSDSASPGGNSLDRSPQ---QPRYSNVLESFESLRFKPTQQ 120

Query: 121 KASPAMSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYS 180
           K SPAMSTL+ YYGL S   + ++   EM+VYRT +S+   +GL  +TS +S  P +   
Sbjct: 121 KVSPAMSTLRDYYGLKSLNHKGATEGTEMAVYRTGSSDHLKEGLLHKTSPISGSPYHNL- 180

Query: 181 KTRKYAGSFWTDNDSI-TEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKG 240
           K+R  + S   ++ S+  +++   ++GD E EKS+EK VRRRQK+E D    T E+ LK 
Sbjct: 181 KSRNTSNSLLPEDGSLMVDYIPLAEAGDAEGEKSNEKSVRRRQKSEADPRAGTPEKLLKE 240

Query: 241 ENSNGNY-FSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKS 300
           ENS G+  FSP  GK LAMR KS SR AL S+++ VW+NSIP+GLGD I+ DG + V KS
Sbjct: 241 ENSGGSSDFSPVTGKGLAMRPKSASRAALSSETESVWLNSIPIGLGDSIMADGMTGVRKS 300

Query: 301 LSTSNLRDQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 353
            ST +L DQDNSN  SVW ++KWSLK DLQALS+ AI+ P+FDGLP PI+GRR+KAALD
Sbjct: 301 SSTPSLHDQDNSNLPSVWPSSKWSLKTDLQALSTAAITIPIFDGLPKPISGRRSKAALD 353

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BLAST of CSPI01G07510 vs. TAIR10
Match: AT5G08200.1 (AT5G08200.1 peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 248.1 bits (632), Expect = 8.3e-66
Identity = 169/366 (46.17%), Postives = 222/366 (60.66%), Query Frame = 1


Query: 3   PSNSSPSGVNGHGGSN----YIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFA 62
           PS+SSP     HG ++    YIEH+IS+ DTLAG+AIKYGVEVAD++++N L  DLQMFA
Sbjct: 60  PSSSSPPF---HGSNSPDRGYIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFA 119

Query: 63  LKKLRIPLPGRHPPSPSLSDGSAVTGNG---SVNEEPLHLGQPTNMLNSLQSWRLKSPNQ 122
           LK L+IPLPGRHPPSP LS+GS   G G      E P H  Q   + +S QS RLKS  +
Sbjct: 120 LKSLQIPLPGRHPPSPCLSNGSLNHGEGCSCHEPESPNHSEQ--EVFDSFQSLRLKSSEK 179

Query: 123 KASPAMSTLQKYYGLSSQTLETSSVD-MEMSVYRTENSN---STGDGLFSRTSVLSTPPL 182
           K SPAM +LQ YYGL       S     EM  Y+TE S+   + GD  + R    +  PL
Sbjct: 180 KVSPAMYSLQGYYGLKPADRTVSDGGCFEMGNYKTETSHHIFNNGDNGYLRPFPSTNTPL 239

Query: 183 NIYSKTRKYAGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERS 242
           N + K+R          +++ E + ++   + +   SD K +RRRQK+E D    T E  
Sbjct: 240 NHHRKSRSLV-------NALIEEVNQSPDNNTQEPTSD-KFMRRRQKSEADFSSRTPELV 299

Query: 243 LKGEN--SNGNYFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSE 302
           LK EN  SNG + S + GK LA+R K+ SRT L ++S+    N + + L D  ++D  S 
Sbjct: 300 LKEENGSSNGGFLSIA-GKGLALRSKASSRTNLAAESENGNFNPVSMNLMDAPVSDSFSS 359

Query: 303 VHKSLSTSNLRDQD---NSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRR 353
           V KS S S+L+D D   N+ S S+W T+KWSLKPDL  L+  AI+  +FDGLP P+TGRR
Sbjct: 360 VRKSSSASSLQDPDGNSNNGSLSLWPTSKWSLKPDL--LTPAAITSSIFDGLPKPLTGRR 409

[Close]

BLAST of CSPI01G07510 vs. TAIR10
Match: AT5G23130.1 (AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-60
Identity = 154/354 (43.50%), Postives = 216/354 (61.02%), Query Frame = 1


Query: 3   PSNSSPSGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKL 62
           P++S PS  +   G  YIEH++S+ DTLAGIAIKYGVEVADI +LNGL  DLQMFAL+ L
Sbjct: 55  PTSSPPSSASTCAG--YIEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESL 114

Query: 63  RIPLPGRHPPSPSLSDGSAVTGN--GSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 122
           RIPLPGRHPPSP LS+GS   G             G   ++ +S QS RL    +K SPA
Sbjct: 115 RIPLPGRHPPSPCLSNGSLNHGEDWSEQASSSASNGNHQDVFDSFQSLRLNHSEKKISPA 174

Query: 123 MSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYSKTRKY 182
           M++LQ YYGL  +    +S    M+VY+ E S    +  +      ++ PL+ + K+R  
Sbjct: 175 MNSLQGYYGLKPKN-RRASEGFGMAVYKNEASQLQDNDQYLTPFPATSTPLSHHRKSRSL 234

Query: 183 AGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGEN-SNG 242
             +   + +  + +  +   G+V    S +K +RRRQK+E D      E  LK EN S+ 
Sbjct: 235 VDAVIAEVNQ-SPNPSKAGGGEV---NSTDKPMRRRQKSEADFSSRAPELLLKEENRSSS 294

Query: 243 NYFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLSTSNL 302
             FS   GK+LA+R K+ SR  L +++    +NSIP+ L D  + D  S V KS+S S+L
Sbjct: 295 GAFSAIAGKNLALRSKASSRANLSAETR--HLNSIPINLMDAPVGDSFSSVRKSVSASSL 354

Query: 303 RDQD-NSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 353
           ++ + NSN +S+W T+KW+LKP+L  L+ VA++  +FDGLP P+TGRRNK A+D
Sbjct: 355 QEPNCNSNGSSLWPTSKWTLKPEL--LTQVAMASSIFDGLPKPLTGRRNKKAVD 397

[Close]

BLAST of CSPI01G07510 vs. NCBI nr
Match: gi|449439507|ref|XP_004137527.1| (PREDICTED: uncharacterized protein LOC101205794 isoform X1 [Cucumis sativus])

HSP 1 Score: 681.0 bits (1756), Expect = 1.1e-192
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 1


Query: 1   MSPSNSSPSGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSSPSGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSPSGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120
           KLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120

Query: 121 MSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYSKTRKY 180
           MSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYSKTRKY
Sbjct: 121 MSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYSKTRKY 180

Query: 181 AGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGENSNGN 240
           AGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGENSNGN
Sbjct: 181 AGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGENSNGN 240

Query: 241 YFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLSTSNLR 300
           YFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLSTSNLR
Sbjct: 241 YFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLSTSNLR 300

Query: 301 DQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 353
           DQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD
Sbjct: 301 DQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of CSPI01G07510 vs. NCBI nr
Match: gi|659066955|ref|XP_008467281.1| (PREDICTED: uncharacterized protein LOC103504667 isoform X1 [Cucumis melo])

HSP 1 Score: 635.2 bits (1637), Expect = 6.9e-179
Identity = 332/352 (94.32%), Postives = 338/352 (96.02%), Query Frame = 1


Query: 1   MSPSNSSPSGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSS SGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSASGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120
           KLRIPLPGRHPPSPSLSD SAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120

Query: 121 MSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYSKTRKY 180
           MSTLQKYYGLSSQTL+TSSVDMEMSVYRTENSNS  DGLFSRTSVLSTPP NIYSKTRKY
Sbjct: 121 MSTLQKYYGLSSQTLKTSSVDMEMSVYRTENSNSISDGLFSRTSVLSTPPPNIYSKTRKY 180

Query: 181 AGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGENSNGN 240
           AGSFWT+NDSITEHLLRTDSGD ESEKSDEKLVRRRQKAEVDNGVTT ERSLK ENSNG+
Sbjct: 181 AGSFWTENDSITEHLLRTDSGDGESEKSDEKLVRRRQKAEVDNGVTTAERSLKSENSNGS 240

Query: 241 YFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLSTSNLR 300
           YFSPSNGKSLAMRLKS SRT L SDSDPV INSIPVGLGDDIIT+GT EVHKSLSTSNLR
Sbjct: 241 YFSPSNGKSLAMRLKSVSRTVLSSDSDPVRINSIPVGLGDDIITNGTPEVHKSLSTSNLR 300

Query: 301 DQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 353
           DQDNSNST VWST+KWSLKPDLQALSSVAI+KPLFDGLPNPITGRRNKAALD
Sbjct: 301 DQDNSNSTFVWSTSKWSLKPDLQALSSVAIAKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of CSPI01G07510 vs. NCBI nr
Match: gi|778657505|ref|XP_011650998.1| (PREDICTED: uncharacterized protein LOC101205794 isoform X2 [Cucumis sativus])

HSP 1 Score: 575.9 bits (1483), Expect = 5.0e-161
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 1


Query: 56  MFALKKLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQ 115
           MFALKKLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQ
Sbjct: 1   MFALKKLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQ 60

Query: 116 KASPAMSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYS 175
           KASPAMSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYS
Sbjct: 61  KASPAMSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYS 120

Query: 176 KTRKYAGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGE 235
           KTRKYAGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGE
Sbjct: 121 KTRKYAGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGE 180

Query: 236 NSNGNYFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLS 295
           NSNGNYFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLS
Sbjct: 181 NSNGNYFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLS 240

Query: 296 TSNLRDQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 353
           TSNLRDQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD
Sbjct: 241 TSNLRDQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 297

[Close]

BLAST of CSPI01G07510 vs. NCBI nr
Match: gi|659066957|ref|XP_008467290.1| (PREDICTED: uncharacterized protein LOC103504667 isoform X2 [Cucumis melo])

HSP 1 Score: 533.1 bits (1372), Expect = 3.7e-148
Identity = 278/297 (93.60%), Postives = 284/297 (95.62%), Query Frame = 1


Query: 56  MFALKKLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQ 115
           MFALKKLRIPLPGRHPPSPSLSD SAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQ
Sbjct: 1   MFALKKLRIPLPGRHPPSPSLSDASAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQ 60

Query: 116 KASPAMSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYS 175
           KASPAMSTLQKYYGLSSQTL+TSSVDMEMSVYRTENSNS  DGLFSRTSVLSTPP NIYS
Sbjct: 61  KASPAMSTLQKYYGLSSQTLKTSSVDMEMSVYRTENSNSISDGLFSRTSVLSTPPPNIYS 120

Query: 176 KTRKYAGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGE 235
           KTRKYAGSFWT+NDSITEHLLRTDSGD ESEKSDEKLVRRRQKAEVDNGVTT ERSLK E
Sbjct: 121 KTRKYAGSFWTENDSITEHLLRTDSGDGESEKSDEKLVRRRQKAEVDNGVTTAERSLKSE 180

Query: 236 NSNGNYFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLS 295
           NSNG+YFSPSNGKSLAMRLKS SRT L SDSDPV INSIPVGLGDDIIT+GT EVHKSLS
Sbjct: 181 NSNGSYFSPSNGKSLAMRLKSVSRTVLSSDSDPVRINSIPVGLGDDIITNGTPEVHKSLS 240

Query: 296 TSNLRDQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 353
           TSNLRDQDNSNST VWST+KWSLKPDLQALSSVAI+KPLFDGLPNPITGRRNKAALD
Sbjct: 241 TSNLRDQDNSNSTFVWSTSKWSLKPDLQALSSVAIAKPLFDGLPNPITGRRNKAALD 297

[Close]

BLAST of CSPI01G07510 vs. NCBI nr
Match: gi|743919328|ref|XP_011003687.1| (PREDICTED: uncharacterized protein LOC105110364 [Populus euphratica])

HSP 1 Score: 344.4 bits (882), Expect = 2.4e-91
Identity = 200/361 (55.40%), Postives = 255/361 (70.64%), Query Frame = 1


Query: 1   MSPSNSSPSGVNGHG--------GSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAA 60
           MSPSNS+ +  NG G        G NYIEHQ+S+ DTLAG+AIKYGVEVADI+RLNGL+ 
Sbjct: 1   MSPSNSNIAISNGGGSGDSNSSNGKNYIEHQVSKRDTLAGVAIKYGVEVADIKRLNGLST 60

Query: 61  DLQMFALKKLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKS 120
           DLQMFALK L IPLPGRHPPSP LS GSA  G   V+  P    + +N+L +L+S  LKS
Sbjct: 61  DLQMFALKTLLIPLPGRHPPSPILSKGSASPGGNDVDMTPTW-PRHSNVLETLESLSLKS 120

Query: 121 PNQKASPAMSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLN 180
           P QK SPAMSTLQK+YGL S     S+  MEM+VYR  + +   +GL  R + +S P  +
Sbjct: 121 PQQKVSPAMSTLQKFYGLKSSKHRDSAEGMEMAVYRRGSLDYLNEGLLHRATPVSGPSYS 180

Query: 181 IYSKTRKYAGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSL 240
            + ++   A  F ++N    E+   +++ + E EKS+EK VRRRQKA+ D    TTE+ L
Sbjct: 181 SH-RSINLADDFLSENGLAAEYNPLSEAREGEGEKSNEKFVRRRQKADADPRSGTTEKLL 240

Query: 241 KGENSNGNY-FSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVH 300
           K EN+ G+  FSP  GK L+MR KS SRT+L ++S+P W+N++PVGLGD II D +  V 
Sbjct: 241 KEENNGGSRPFSPVTGKGLSMRPKSASRTSLAAESEPGWLNAMPVGLGDSIIGDVSDGVR 300

Query: 301 KSLSTSNLRDQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAAL 353
           KS ST +L+DQ+NS S+SVW T+KWSLKPDLQALS+ AIS P+FDGLP PI+GRR+KAAL
Sbjct: 301 KSSSTPSLQDQENSYSSSVWPTSKWSLKPDLQALSTAAISIPIFDGLPKPISGRRSKAAL 359

The following BLAST results are available for this feature:

BLAST of CSPI01G07510 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G07510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQZ4_CUCSA	7.6e-193	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043110 PE=4 SV=1	[more]
A9PH52_POPTR	6.4e-91	54.85	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s03350g PE=2 SV=1	[more]
A0A067E112_CITSI	6.4e-91	56.16	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018429mg PE=4 SV=1	[more]
V4TSH2_9ROSI	6.4e-91	56.16	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020822mg PE=4 SV=1	[more]
A0A067LBP9_JATCU	8.4e-91	55.99	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17414 PE=4 SV=1	[more]

BLAST of CSPI01G07510 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08200.1	8.3e-66	46.17	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G23130.1	1.1e-60	43.50	Peptidoglycan-binding LysM domain-containing protein	[more]

BLAST of CSPI01G07510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439507\|ref\|XP_004137527.1\|	1.1e-192	100.00	PREDICTED: uncharacterized protein LOC101205794 isoform X1 [Cucumis sativus]	[more]
gi\|659066955\|ref\|XP_008467281.1\|	6.9e-179	94.32	PREDICTED: uncharacterized protein LOC103504667 isoform X1 [Cucumis melo]	[more]
gi\|778657505\|ref\|XP_011650998.1\|	5.0e-161	100.00	PREDICTED: uncharacterized protein LOC101205794 isoform X2 [Cucumis sativus]	[more]
gi\|659066957\|ref\|XP_008467290.1\|	3.7e-148	93.60	PREDICTED: uncharacterized protein LOC103504667 isoform X2 [Cucumis melo]	[more]
gi\|743919328\|ref\|XP_011003687.1\|	2.4e-91	55.40	PREDICTED: uncharacterized protein LOC105110364 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018392	LysM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G07510.1	CSPI01G07510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018392	LysM domain	GENE3D	G3DSA:3.10.350.10		coord: 19..65 score: 9.
IPR018392	LysM domain	SMART	SM00257	LysM_2	coord: 21..65 score: 0
IPR018392	LysM domain	unknown	SSF54106	LysM domain	coord: 20..65 score: 4.8
None	No IPR available	PANTHER	PTHR20932	LOC443603 PROTEIN-RELATED	coord: 175..352 score: 3.5E-119coord: 9..114 score: 3.5E
None	No IPR available	PANTHER	PTHR20932:SF11	SUBFAMILY NOT NAMED	coord: 175..352 score: 3.5E-119coord: 9..114 score: 3.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G07510	Cla008386	Watermelon (97103) v1	cpiwmB042
CSPI01G07510	Csa1G043110	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G07510	MELO3C002164	Melon (DHL92) v3.5.1	cpimeB024
CSPI01G07510	ClCG01G014850	Watermelon (Charleston Gray)	cpiwcgB024
CSPI01G07510	Lsi02G002690	Bottle gourd (USVL1VR-Ls)	cpilsiB021
CSPI01G07510	MELO3C002164.2	Melon (DHL92) v3.6.1	cpimedB023
CSPI01G07510	CsaV3_1G007480	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G07510	Cla97C01G013870	Watermelon (97103) v2	cpiwmbB010
CSPI01G07510	Bhi08G001110	Wax gourd	cpiwgoB028
CSPI01G07510	Cucsa.122240	Cucumber (Gy14) v1	cgycpiB160
CSPI01G07510	CmaCh18G000980	Cucurbita maxima (Rimu)	cmacpiB394
CSPI01G07510	CmoCh18G000740	Cucurbita moschata (Rifu)	cmocpiB383
CSPI01G07510	Cp4.1LG09g11070	Cucurbita pepo (Zucchini)	cpecpiB025
CSPI01G07510	CsGy1G007390	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G07510	Carg06652	Silver-seed gourd	carcpiB0531

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G07510	Silver-seed gourd	carcpiB0418
CSPI01G07510	Cucurbita maxima (Rimu)	cmacpiB218
CSPI01G07510	Cucurbita moschata (Rifu)	cmocpiB204
CSPI01G07510	Cucurbita pepo (Zucchini)	cpecpiB505